g.arboreum_cottongen_reftransV1_0002376, g.arboreum_cottongen_reftransV1_0002376 (contig) Gossypium arboreum

Overview


Name	g.arboreum_cottongen_reftransV1_0002376
Unique Name	g.arboreum_cottongen_reftransV1_0002376
Type	contig
Organism	Gossypium arboreum (Tree cotton)
Sequence length	327

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Chr13	chromosome	g.arboreum_cottongen_reftransV1_0002376:1..327 . Chr13:90463176..90463502 +

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium arboreum CottonGen RefTrans V1	2016-11-14
InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1	2016-11-14
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL	2016-11-15
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt	2016-11-15

Homology

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy TrEMBL
Match: A0A0D2VG05_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G159300 PE=4 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 5.713e-71
Identity = 107/108 (99.07%), Postives = 108/108 (100.00%), Query Frame = -2

Query:    3 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 326
            ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVH+VMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK
Sbjct:  108 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 215

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy TrEMBL
Match: A0A061F6M0_THECC (Calmodulin-domain protein kinase 9 isoform 3 OS=Theobroma cacao GN=TCM_030876 PE=3 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 1.555e-70
Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = -2

Query:    3 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 326
            ENSTGKQYACKTISKRKLV KNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK
Sbjct:  108 ENSTGKQYACKTISKRKLVTKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 215

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy TrEMBL
Match: A0A061F5L9_THECC (Calmodulin-domain protein kinase 9 isoform 2 OS=Theobroma cacao GN=TCM_030876 PE=4 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 2.183e-70
Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = -2

Query:    3 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 326
            ENSTGKQYACKTISKRKLV KNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK
Sbjct:  108 ENSTGKQYACKTISKRKLVTKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 215

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy TrEMBL
Match: A0A0D2U231_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G159300 PE=4 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 2.958e-70
Identity = 107/108 (99.07%), Postives = 108/108 (100.00%), Query Frame = -2

Query:    3 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 326
            ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVH+VMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK
Sbjct:  108 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 215

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy TrEMBL
Match: A0A0B0NYW7_GOSAR (Calcium-dependent protein kinase 9 OS=Gossypium arboreum GN=F383_23464 PE=4 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 1.031e-69
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = -2

Query:    3 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 326
            ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK
Sbjct:  108 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 215

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy TrEMBL
Match: A0A061F4S0_THECC (Calmodulin-domain protein kinase 9 isoform 1 OS=Theobroma cacao GN=TCM_030876 PE=4 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 2.259e-69
Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = -2

Query:    3 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 326
            ENSTGKQYACKTISKRKLV KNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK
Sbjct:  108 ENSTGKQYACKTISKRKLVTKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 215

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy TrEMBL
Match: A0A0D2SEY4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G159300 PE=4 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 3.106e-69
Identity = 107/108 (99.07%), Postives = 108/108 (100.00%), Query Frame = -2

Query:    3 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 326
            ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVH+VMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK
Sbjct:  108 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 215

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy TrEMBL
Match: A0A0D2Q9U0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G088800 PE=4 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 1.580e-67
Identity = 103/108 (95.37%), Postives = 106/108 (98.15%), Query Frame = -2

Query:    3 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 326
            ENSTGKQYACKTISK+KLV +NDKEDM+REIQIMQHLSGQPNIVEFKGAYEDK SVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK
Sbjct:  109 ENSTGKQYACKTISKKKLVTRNDKEDMRREIQIMQHLSGQPNIVEFKGAYEDKLSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 216

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy TrEMBL
Match: A0A067F5T2_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0096582mg PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 1.727e-67
Identity = 99/108 (91.67%), Postives = 106/108 (98.15%), Query Frame = -2

Query:    3 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 326
            ENSTG+Q+ACK+ISKRKLV KNDK+D+KREIQIMQHLSGQPNIVEFKGAYEDKQSVH+VMELCAGGELFDRIIAKGHYSERAAASICR+IVNVVH CHFMGVMHRDLK
Sbjct:  100 ENSTGRQFACKSISKRKLVTKNDKDDIKREIQIMQHLSGQPNIVEFKGAYEDKQSVHVVMELCAGGELFDRIIAKGHYSERAAASICRSIVNVVHICHFMGVMHRDLK 207

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy TrEMBL
Match: A0A0D2R2U8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G088800 PE=4 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 5.113e-67
Identity = 103/108 (95.37%), Postives = 106/108 (98.15%), Query Frame = -2

Query:    3 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 326
            ENSTGKQYACKTISK+KLV +NDKEDM+REIQIMQHLSGQPNIVEFKGAYEDK SVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK
Sbjct:  109 ENSTGKQYACKTISKKKLVTRNDKEDMRREIQIMQHLSGQPNIVEFKGAYEDKLSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 216

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy Swiss-Prot
Match: CDPKJ_ARATH (Calcium-dependent protein kinase 19 OS=Arabidopsis thaliana GN=CPK19 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 6.586e-51
Identity = 78/108 (72.22%), Postives = 93/108 (86.11%), Query Frame = -2

Query:    3 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 326
            E S+GK +ACK+I KRKL+R  D+ED++REIQIM +LSGQPNIVE KGAYED+QSVHLVMELC GGELFD+I  +GHYSE+AAA I R++V VV  CHFMGV+HRDLK
Sbjct:  117 EISSGKNFACKSILKRKLIRTKDREDVRREIQIMHYLSGQPNIVEIKGAYEDRQSVHLVMELCEGGELFDKITKRGHYSEKAAAEIIRSVVKVVQICHFMGVIHRDLK 224

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy Swiss-Prot
Match: CDPKN_ARATH (Calcium-dependent protein kinase 23 OS=Arabidopsis thaliana GN=CPK23 PE=1 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 7.084e-48
Identity = 77/108 (71.30%), Postives = 90/108 (83.33%), Query Frame = -2

Query:    3 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 326
            E  TG  YACK+I KRKL+ +  +ED+K EIQIMQHLSGQPN+VE KG+YED+ SVHLVMELCAGGELFDRIIA+GHYSERAAA   ++IV+VV  CH  GV+HRDLK
Sbjct:   88 EIGTGNIYACKSILKRKLISELGREDVKTEIQIMQHLSGQPNVVEIKGSYEDRHSVHLVMELCAGGELFDRIIAQGHYSERAAAGTIKSIVDVVQICHLNGVIHRDLK 195

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy Swiss-Prot
Match: CDPK4_SOLTU (Calcium-dependent protein kinase 4 OS=Solanum tuberosum GN=CPK4 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 7.828e-47
Identity = 76/108 (70.37%), Postives = 88/108 (81.48%), Query Frame = -2

Query:    3 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 326
            ENSTG +YACK+ISKRKL+ K D ED++REIQIM HLSG  NIV  KGAYED   VH+VME+C+GGELFDRII +GHYSER AA + + IV VV ACH +GVMHRDLK
Sbjct:  113 ENSTGAEYACKSISKRKLISKEDVEDVRREIQIMHHLSGHRNIVTIKGAYEDPLYVHIVMEICSGGELFDRIIQRGHYSERKAAELTKIIVGVVEACHSLGVMHRDLK 220

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy Swiss-Prot
Match: CDPK1_ARATH (Calcium-dependent protein kinase 1 OS=Arabidopsis thaliana GN=CPK1 PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.011e-46
Identity = 72/108 (66.67%), Postives = 88/108 (81.48%), Query Frame = -2

Query:    3 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 326
            E +TGK++ACK+I+KRKL+   D ED++REIQIM HL+G PN++  KGAYED  +VHLVME CAGGELFDRII +GHY+ER AA + R IV VV ACH +GVMHRDLK
Sbjct:  169 EKTTGKEFACKSIAKRKLLTDEDVEDVRREIQIMHHLAGHPNVISIKGAYEDVVAVHLVMECCAGGELFDRIIQRGHYTERKAAELTRTIVGVVEACHSLGVMHRDLK 276

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy Swiss-Prot
Match: CDPK2_ARATH (Calcium-dependent protein kinase 2 OS=Arabidopsis thaliana GN=CPK2 PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 6.524e-46
Identity = 72/108 (66.67%), Postives = 87/108 (80.56%), Query Frame = -2

Query:    3 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 326
            E  TG +YACK+ISKRKL+   D ED++REIQIM HL+G PN++  KGAYED  +VHLVMELC+GGELFDRII +GHY+ER AA + R IV V+ ACH +GVMHRDLK
Sbjct:  205 EKGTGNEYACKSISKRKLLTDEDVEDVRREIQIMHHLAGHPNVISIKGAYEDVVAVHLVMELCSGGELFDRIIQRGHYTERKAAELARTIVGVLEACHSLGVMHRDLK 312

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy Swiss-Prot
Match: CDPKQ_ARATH (Calcium-dependent protein kinase 26 OS=Arabidopsis thaliana GN=CPK26 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 8.727e-46
Identity = 74/108 (68.52%), Postives = 88/108 (81.48%), Query Frame = -2

Query:    3 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 326
            E STG++YACK+I+KRKL+ K D ED++REIQIM HL+G  NIV  KGAYED   VH+VMELC+GGELFDRII +GHYSER AA + + IV VV ACH +GVMHRDLK
Sbjct:   43 EISTGREYACKSITKRKLISKEDVEDVRREIQIMHHLAGYKNIVTIKGAYEDPLYVHIVMELCSGGELFDRIIQRGHYSERKAAELIKIIVGVVEACHSLGVMHRDLK 150

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy Swiss-Prot
Match: CDPK3_ARATH (Calcium-dependent protein kinase 3 OS=Arabidopsis thaliana GN=CPK3 PE=1 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.676e-45
Identity = 73/105 (69.52%), Postives = 88/105 (83.81%), Query Frame = -2

Query:    3 TGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 317
            T +Q ACK+I  R+LV K+D ED++RE+QIM HLSG  NIV+ KGAYED+ SV+L+MELC GGELFDRII+KG YSERAAA +CR +V VVH+CH MGVMHRDLK
Sbjct:  100 TKQQVACKSIPTRRLVHKDDIEDVRREVQIMHHLSGHRNIVDLKGAYEDRHSVNLIMELCEGGELFDRIISKGLYSERAAADLCRQMVMVVHSCHSMGVMHRDLK 204

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy Swiss-Prot
Match: CDPKK_ARATH (Calcium-dependent protein kinase 20 OS=Arabidopsis thaliana GN=CPK20 PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 5.738e-45
Identity = 69/108 (63.89%), Postives = 87/108 (80.56%), Query Frame = -2

Query:    3 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 326
            +  TGK++ACKTI+KRKL    D ED++REIQIM HLSG PN+++  GAYED  +VH+VME+CAGGELFDRII +GHY+E+ AA + R IV V+ ACH +GVMHRDLK
Sbjct:  153 DKKTGKEFACKTIAKRKLTTPEDVEDVRREIQIMHHLSGHPNVIQIVGAYEDAVAVHVVMEICAGGELFDRIIQRGHYTEKKAAELARIIVGVIEACHSLGVMHRDLK 260

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy Swiss-Prot
Match: CDPK6_ARATH (Calcium-dependent protein kinase 6 OS=Arabidopsis thaliana GN=CPK6 PE=1 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 6.378e-45
Identity = 74/106 (69.81%), Postives = 85/106 (80.19%), Query Frame = -2

Query:    3 STGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 320
            +TG  YACK+ISKRKL+ K D ED++REIQIM HL+G  NIV  KGAYED   VH+VMELCAGGELFDRII +GHYSER AA + + IV VV ACH +GVMHRDLK
Sbjct:  106 ATGVDYACKSISKRKLISKEDVEDVRREIQIMHHLAGHKNIVTIKGAYEDPLYVHIVMELCAGGELFDRIIHRGHYSERKAAELTKIIVGVVEACHSLGVMHRDLK 211

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy Swiss-Prot
Match: CDPK5_ARATH (Calcium-dependent protein kinase 5 OS=Arabidopsis thaliana GN=CPK5 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 5.156e-44
Identity = 73/108 (67.59%), Postives = 86/108 (79.63%), Query Frame = -2

Query:    3 ENSTGKQYACKTISKRKLVRKNDKEDMKREIQIMQHLSGQPNIVEFKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYSERAAASICRAIVNVVHACHFMGVMHRDLK 326
            E ++G  YACK+ISKRKL+ K D ED++REIQIM HL+G  +IV  KGAYED   VH+VMELCAGGELFDRII +GHYSER AA + + IV VV ACH +GVMHRDLK
Sbjct:  116 EIASGVDYACKSISKRKLISKEDVEDVRREIQIMHHLAGHGSIVTIKGAYEDSLYVHIVMELCAGGELFDRIIQRGHYSERKAAELTKIIVGVVEACHSLGVMHRDLK 223

The following BLAST results are available for this feature:

BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy TrEMBL
BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy Swiss-Prot

BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
A0A0D2VG05_GOSRA	5.713e-71	99.07	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A061F6M0_THECC	1.555e-70	99.07	Calmodulin-domain protein kinase 9 isoform 3 OS=Th...	[more]
A0A061F5L9_THECC	2.183e-70	99.07	Calmodulin-domain protein kinase 9 isoform 2 OS=Th...	[more]
A0A0D2U231_GOSRA	2.958e-70	99.07	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0B0NYW7_GOSAR	1.031e-69	100.00	Calcium-dependent protein kinase 9 OS=Gossypium ar...	[more]
A0A061F4S0_THECC	2.259e-69	99.07	Calmodulin-domain protein kinase 9 isoform 1 OS=Th...	[more]
A0A0D2SEY4_GOSRA	3.106e-69	99.07	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0D2Q9U0_GOSRA	1.580e-67	95.37	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A067F5T2_CITSI	1.727e-67	91.67	Uncharacterized protein (Fragment) OS=Citrus sinen...	[more]
A0A0D2R2U8_GOSRA	5.113e-67	95.37	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]

Pages

BLAST of g.arboreum_cottongen_reftransV1_0002376 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
CDPKJ_ARATH	6.586e-51	72.22	Calcium-dependent protein kinase 19 OS=Arabidopsis...	[more]
CDPKN_ARATH	7.084e-48	71.30	Calcium-dependent protein kinase 23 OS=Arabidopsis...	[more]
CDPK4_SOLTU	7.828e-47	70.37	Calcium-dependent protein kinase 4 OS=Solanum tube...	[more]
CDPK1_ARATH	3.011e-46	66.67	Calcium-dependent protein kinase 1 OS=Arabidopsis ...	[more]
CDPK2_ARATH	6.524e-46	66.67	Calcium-dependent protein kinase 2 OS=Arabidopsis ...	[more]
CDPKQ_ARATH	8.727e-46	68.52	Calcium-dependent protein kinase 26 OS=Arabidopsis...	[more]
CDPK3_ARATH	2.676e-45	69.52	Calcium-dependent protein kinase 3 OS=Arabidopsis ...	[more]
CDPKK_ARATH	5.738e-45	63.89	Calcium-dependent protein kinase 20 OS=Arabidopsis...	[more]
CDPK6_ARATH	6.378e-45	69.81	Calcium-dependent protein kinase 6 OS=Arabidopsis ...	[more]
CDPK5_ARATH	5.156e-44	67.59	Calcium-dependent protein kinase 5 OS=Arabidopsis ...	[more]

Pages

InterPro

Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000719	Protein kinase domain	PFAM	PF00069	Pkinase	coord: 2..82 e-value: 1.0E-21 score: 77.4
IPR000719	Protein kinase domain	PROSITE	PS50011	PROTEIN_KINASE_DOM	coord: 1..82 score: 17.517
None	No IPR available	GENE3D	3.30.200.20		coord: 2..82 e-value: 2.6E-26 score: 91.8
None	No IPR available	PANTHER	PTHR24349:SF89	CALCIUM-DEPENDENT PROTEIN KINASE 29	coord: 1..82
None	No IPR available	PANTHER	PTHR24349	SERINE/THREONINE-PROTEIN KINASE	coord: 1..82
IPR011009	Protein kinase-like domain	SUPERFAMILY	56112	Protein kinase-like (PK-like)	coord: 2..82

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.arboreum_cottongen_reftransV1_0002376 ID=g.arboreum_cottongen_reftransV1_0002376; Name=g.arboreum_cottongen_reftransV1_0002376; organism=Gossypium arboreum; type=contig; length=327bp
GGCTTAAGGTCCCTATGCATCACACCCATAAAATGGCAAGCATGGACAAC
ATTAACAATAGCCCTACATATAGAAGCCGCTGCCCTTTCACTATAGTGCC
CCTTAGCAATAATCCTATCAAACAATTCACCACCAGCACATAATTCCATC
ACAAGGTGAACAGATTGCTTATCCTCATAAGCACCCTTAAACTCAACAAT
ATTCGGTTGTCCACTCAAATGTTGCATAATTTGTATCTCCCTTTTCATAT
CTTCCTTATCATTCTTTCTCACTAGCTTCCTCTTGGATATAGTCTTGCAA
GCATATTGTTTACCAGTTGAATTCTCG

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR000719	Prot_kinase_dom
IPR011009	Kinase-like_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding
GO:0004672	protein kinase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006468	protein phosphorylation

Search form

g.arboreum_cottongen_reftransV1_0002376, g.arboreum_cottongen_reftransV1_0002376 (contig) Gossypium arboreum

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