g.arboreum_cottongen_reftransV1_0002498, g.arboreum_cottongen_reftransV1_0002498 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0002498
Unique Nameg.arboreum_cottongen_reftransV1_0002498
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length1203
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr7chromosomeg.arboreum_cottongen_reftransV1_0002498:1..1203 .
Chr7:90640252..90641454 -
n/a
Homology
BLAST of g.arboreum_cottongen_reftransV1_0002498 vs. ExPASy TrEMBL
Match: K4CXL8_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc10g006870.1 PE=3 SV=1)

HSP 1 Score: 664.07 bits (1712), Expect = 0.000e+0
Identity = 330/362 (91.16%), Postives = 344/362 (95.03%), Query Frame = 3
Query:    3 SSNLGRFFSFQEILDATNKFDESLLLGVGGFGRVYTGTLEDGTKVAVKRGNPRSEQGLAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGTNLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDENFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPASLKKYGETAEKCLAEHGVDRPSMGDVLWNLEYALQLEETSSALMEPDDNSTNHIPAIQ-TPLEPFDNSVSMIDG--NSGXXXXXXXXXXXXVFSQLVNPRGR 1079
            S N+GRFFSFQEI+DATNKFDESLLLGVGGFGRVY GT+EDGTK+AVKRGN  SEQGLAEF+TEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGT+LPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLD+NF+AKVADFGLSK GPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAM WQKKGMLD+IMD NL G+VNPASLKK+GETAEKCLAE+GVDRPSMGDVLWNLEYALQLEE SSAL EPDDNSTNHIP I  TP+EPFDNSVS I G  NSGTDDDA DAATS+VFSQLVNPRGR
Sbjct:  479 SPNVGRFFSFQEIMDATNKFDESLLLGVGGFGRVYKGTMEDGTKLAVKRGNTGSEQGLAEFQTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDDNFLAKVADFGLSKAGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMIWQKKGMLDRIMDPNLKGQVNPASLKKFGETAEKCLAEYGVDRPSMGDVLWNLEYALQLEEASSALTEPDDNSTNHIPGIPLTPVEPFDNSVSNIQGIVNSGTDDDAGDAATSSVFSQLVNPRGR 840          
BLAST of g.arboreum_cottongen_reftransV1_0002498 vs. ExPASy TrEMBL
Match: D7MU84_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_495518 PE=3 SV=1)

HSP 1 Score: 663.3 bits (1710), Expect = 0.000e+0
Identity = 328/364 (90.11%), Postives = 344/364 (94.51%), Query Frame = 3
Query:    3 SSNLGRFFSFQEILDATNKFDESLLLGVGGFGRVYTGTLEDGTKVAVKRGNPRSEQGLAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGTNLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDENFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPASLKKYGETAEKCLAEHGVDRPSMGDVLWNLEYALQLEETSSALMEPDDNSTNHIPAI-QTPLEPFDNSVSMID----GNSGXXXXXXXXXXXXVFSQLVNPRGR 1079
            S++LGR F FQEI+DATNKFDES LLGVGGFGRVY GTLEDGTKVAVKRGNPRSEQG+AEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYG +LPPLSWKQRLE+CIGAARGLHYLHTGA+QSIIHRDVKTTNILLDEN VAKVADFGLSKTGP+LDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC RPALNPVLPREQVNIAEWAM WQKKG+LDQIMDSNL GKVNPASLKK+GETAEKCLAE+GVDRPSMGDVLWNLEYALQLEETSSALMEPDDNSTNHIP I   P+EPFDNS+S+ID      +GTDDDAEDA TSAVFSQLV+PRGR
Sbjct:  489 STHLGRCFMFQEIMDATNKFDESSLLGVGGFGRVYKGTLEDGTKVAVKRGNPRSEQGMAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGADLPPLSWKQRLEVCIGAARGLHYLHTGASQSIIHRDVKTTNILLDENLVAKVADFGLSKTGPSLDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCCRPALNPVLPREQVNIAEWAMVWQKKGLLDQIMDSNLTGKVNPASLKKFGETAEKCLAEYGVDRPSMGDVLWNLEYALQLEETSSALMEPDDNSTNHIPGIPMAPMEPFDNSMSIIDRGVNSGTGTDDDAEDATTSAVFSQLVHPRGR 852          
BLAST of g.arboreum_cottongen_reftransV1_0002498 vs. ExPASy TrEMBL
Match: A0A078JC52_BRANA (BnaA10g28720D protein OS=Brassica napus GN=BnaA10g28720D PE=4 SV=1)

HSP 1 Score: 661.759 bits (1706), Expect = 0.000e+0
Identity = 328/365 (89.86%), Postives = 342/365 (93.70%), Query Frame = 3
Query:    3 SSNLGRFFSFQEILDATNKFDESLLLGVGGFGRVYTGTLEDGTKVAVKRGNPRSEQGLAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGTNLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDENFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPASLKKYGETAEKCLAEHGVDRPSMGDVLWNLEYALQLEETSSALMEPDDNSTNHIPAI-QTPLEPFDNSVSMID---GNSGXXX--XXXXXXXXXVFSQLVNPRGR 1079
            S++LGR F FQEI+DATNKFDES LLGVGGFGRVY GTLEDGTKVAVKRGNPRSEQG+AEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYG  LPPLSWKQRLEICIGAARGLHYLHTGA+QSIIHRDVKTTNILLDEN VAKVADFGLSKTGP+LDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC RPALNPVLPREQVNIAEWAM WQKKG+LDQIMDSNL GKVNPASLKK+GETAEKCLAE+GVDRPSMGDVLWNLEYALQLEETSSALME DDNSTNHIP I   P+EPFDNS+SM++   GNSGT    DAEDA TSAVFSQLV+PRGR
Sbjct:  489 STHLGRVFMFQEIMDATNKFDESSLLGVGGFGRVYKGTLEDGTKVAVKRGNPRSEQGMAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGAELPPLSWKQRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILLDENLVAKVADFGLSKTGPSLDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCCRPALNPVLPREQVNIAEWAMAWQKKGLLDQIMDSNLTGKVNPASLKKFGETAEKCLAEYGVDRPSMGDVLWNLEYALQLEETSSALMEADDNSTNHIPGIPMAPMEPFDNSMSMMERGGGNSGTGTDDDAEDATTSAVFSQLVHPRGR 853          
BLAST of g.arboreum_cottongen_reftransV1_0002498 vs. ExPASy TrEMBL
Match: M1CCC6_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400025030 PE=3 SV=1)

HSP 1 Score: 661.374 bits (1705), Expect = 0.000e+0
Identity = 329/362 (90.88%), Postives = 343/362 (94.75%), Query Frame = 3
Query:    3 SSNLGRFFSFQEILDATNKFDESLLLGVGGFGRVYTGTLEDGTKVAVKRGNPRSEQGLAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGTNLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDENFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPASLKKYGETAEKCLAEHGVDRPSMGDVLWNLEYALQLEETSSALMEPDDNSTNHIPAIQ-TPLEPFDNSVSMIDG--NSGXXXXXXXXXXXXVFSQLVNPRGR 1079
            S N+GRFFSFQEI+DATNKFDE+LLLGVGGFGRVY GT+EDGTK+AVKRGN  SEQGLAEF+TEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGT+LPPLSWKQRLEICIGAARGLHYLHTGA QSIIHRDVKTTNILLD+NFVAKVADFGLSK GPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAM WQKKGMLD+IMD NL G+VNPASLKK+GETAEKCLAE+GVDRPSMGDVLWNLEYALQLEE SSAL EPDDNSTNHIP I  TP+EPFDNSVS I G  NSGTDDDA DAATS+VFSQLVNPRGR
Sbjct:  473 SPNVGRFFSFQEIMDATNKFDENLLLGVGGFGRVYKGTMEDGTKLAVKRGNTGSEQGLAEFQTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGATQSIIHRDVKTTNILLDDNFVAKVADFGLSKAGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMIWQKKGMLDRIMDQNLKGQVNPASLKKFGETAEKCLAEYGVDRPSMGDVLWNLEYALQLEEASSALTEPDDNSTNHIPGIPLTPVEPFDNSVSNIQGIVNSGTDDDAGDAATSSVFSQLVNPRGR 834          
BLAST of g.arboreum_cottongen_reftransV1_0002498 vs. ExPASy TrEMBL
Match: V4LT46_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10016077mg PE=3 SV=1)

HSP 1 Score: 661.374 bits (1705), Expect = 0.000e+0
Identity = 328/365 (89.86%), Postives = 343/365 (93.97%), Query Frame = 3
Query:    3 SSNLGRFFSFQEILDATNKFDESLLLGVGGFGRVYTGTLEDGTKVAVKRGNPRSEQGLAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGTNLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDENFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPASLKKYGETAEKCLAEHGVDRPSMGDVLWNLEYALQLEETSSALMEPDDNSTNHIPAI-QTPLEPFDNSVSMID---GNSGXXX--XXXXXXXXXVFSQLVNPRGR 1079
            S++LGR F FQEI+DATNKFDES LLGVGGFGRVY GTLEDGT VAVKRGNPRSEQG+AEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYG +LPPLSWKQRLEICIGAARGLHYLHTGA+QSIIHRDVKTTNILLDEN VAKVADFGLSKTGP+LDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLC RPALNPVLPREQVNIAEWAM WQKKG+LDQIMDSNL GKVNPASLKK+GETAEKCLAE+GVDRPSMGDVLWNLEYALQLEETSSAL+EPDDNSTNHIP I   P+EPFDNS+S+ID   GNSGT    DAEDA TSAVFSQLV+PRGR
Sbjct:  491 STHLGRCFMFQEIMDATNKFDESSLLGVGGFGRVYKGTLEDGTNVAVKRGNPRSEQGMAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGADLPPLSWKQRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILLDENLVAKVADFGLSKTGPSLDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCCRPALNPVLPREQVNIAEWAMAWQKKGLLDQIMDSNLTGKVNPASLKKFGETAEKCLAEYGVDRPSMGDVLWNLEYALQLEETSSALLEPDDNSTNHIPGIPMAPMEPFDNSMSIIDRGGGNSGTGTDDDAEDATTSAVFSQLVHPRGR 855          
BLAST of g.arboreum_cottongen_reftransV1_0002498 vs. ExPASy Swiss-Prot
Match: ANX1_ARATH (Receptor-like protein kinase ANXUR1 OS=Arabidopsis thaliana GN=ANX1 PE=2 SV=1)

HSP 1 Score: 449.129 bits (1154), Expect = 1.626e-148
Identity = 219/360 (60.83%), Postives = 268/360 (74.44%), Query Frame = 3
Query:    3 SSNLGRFFSFQEILDATNKFDESLLLGVGGFGRVYTGTLEDGTKVAVKRGNPRSEQGLAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGTNLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDENFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPASLKKYGETAEKCLAEHGVDRPSMGDVLWNLEYALQLEETSSALMEPDDNSTNHIPAIQTPLEPFDNSVSMID-GNSGXXXXXXXXXXXXVFSQLVNPRGR 1079
            ++ L R FS  EI   T  FD+S ++GVGGFG+VY G ++  TKVAVK+ NP SEQGL EF TEIE+LS+LRH+HLVSLIGYCDE  EM LVY+YMA G LR HLY T  P L+WK+RLEI IGAARGLHYLHTGA  +IIHRDVKTTNIL+DEN+VAKV+DFGLSKTGP ++  HV+T VKGSFGYLDPEYFRRQQLTEKSDVYSFGVVL E+LC RPALNP LP+EQV++ +WAM  ++KG L+ I+D NL GK+N   LKK+ +TAEKCL + G++RP+MGDVLWNLE+ALQL+ET+       D + +  P      E        ++        D      + +FSQ+VNP+GR
Sbjct:  498 AAGLCRRFSLPEIKHGTQNFDDSNVIGVGGFGKVYKGVIDGTTKVAVKKSNPNSEQGLNEFETEIELLSRLRHKHLVSLIGYCDEGGEMCLVYDYMAFGTLREHLYNTKKPQLTWKRRLEIAIGAARGLHYLHTGAKYTIIHRDVKTTNILVDENWVAKVSDFGLSKTGPNMNGGHVTTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEILCARPALNPSLPKEQVSLGDWAMNCKRKGNLEDIIDPNLKGKINAECLKKFADTAEKCLNDSGLERPTMGDVLWNLEFALQLQETA-------DGTRHRTPNNGGSSEDLGRGGMAVNVAGRDDVSDLSSEDNTEIFSQIVNPKGR 850          
BLAST of g.arboreum_cottongen_reftransV1_0002498 vs. ExPASy Swiss-Prot
Match: Y2393_ARATH (Probable receptor-like protein kinase At2g39360 OS=Arabidopsis thaliana GN=At2g39360 PE=2 SV=1)

HSP 1 Score: 443.351 bits (1139), Expect = 1.396e-146
Identity = 206/309 (66.67%), Postives = 250/309 (80.91%), Query Frame = 3
Query:    3 SSNLGRFFSFQEILDATNKFDESLLLGVGGFGRVYTGTLEDGTKVAVKRGNPRSEQGLAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYG-TNLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDENFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPASLKKYGETAEKCLAEHGVDRPSMGDVLWNLEYALQLEETSSALMEPDD 926
            SS +G  +    I +AT+ FDESL++GVGGFG+VY G L D T+VAVKRG P+S QGLAEF+TE+EML++ RHRHLVSLIGYCDE SEMI+VYEYM  G L+ HLY   + P LSW+QRLEIC+GAARGLHYLHTG+ ++IIHRDVK+ NILLD+NF+AKVADFGLSKTGP LDQTHVSTAVKGSFGYLDPEY  RQQLTEKSDVYSFGVV++EV+C RP ++P LPRE+VN+ EWAM   KKG L+ I+D  LVGKV    +KKY E  EKCL+++G++RP+MGD+LWNLE+ LQ++         DD
Sbjct:  468 SSKIGYRYPLALIKEATDDFDESLVIGVGGFGKVYKGVLRDKTEVAVKRGAPQSRQGLAEFKTEVEMLTQFRHRHLVSLIGYCDENSEMIIVYEYMEKGTLKDHLYDLDDKPRLSWRQRLEICVGAARGLHYLHTGSTRAIIHRDVKSANILLDDNFMAKVADFGLSKTGPDLDQTHVSTAVKGSFGYLDPEYLTRQQLTEKSDVYSFGVVMLEVVCGRPVIDPSLPREKVNLIEWAMKLVKKGKLEDIIDPFLVGKVKLEEVKKYCEVTEKCLSQNGIERPAMGDLLWNLEFMLQVQAKDEKAAMVDD 776          
BLAST of g.arboreum_cottongen_reftransV1_0002498 vs. ExPASy Swiss-Prot
Match: Y2232_ARATH (Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana GN=At2g23200 PE=3 SV=1)

HSP 1 Score: 395.201 bits (1014), Expect = 8.574e-128
Identity = 187/310 (60.32%), Postives = 242/310 (78.06%), Query Frame = 3
Query:    9 NLGRFFSFQEILDATNKFDESLLLGVGGFGRVYTGTLEDGTKVAVKRGNPRSEQGLAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGTNLPPLSWKQRLEICIGAARGLHYLH-TGAAQSIIHRDVKTTNILLDENFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPASLKKYGETAEKCLAEHGVDRPSMGDVLWNLEYALQLEETSSALMEPDDNST 935
            +LG    F +IL ATN FDE LL+G GGFG VY   L DGTK A+KRG   S QG+ EF+TEI++LS++RHRHLVSL GYC+E SEMILVYE+M  G L+ HLYG+NLP L+WKQRLEICIGAARGL YLH +G+  +IIHRDVK+TNILLDE+ +AKVADFGLSK     D++++S  +KG+FGYLDPEY +  +LTEKSDVY+FGVVL+EVL  RPA++P LP E+VN++EW M  + KG +D+I+D +L+G++   SLKK+ E AEKCL E+G +RPSM DV+W+LEY LQL+  ++     +++ST
Sbjct:  471 HLGLTIPFTDILSATNNFDEQLLIGKGGFGYVYKAILPDGTKAAIKRGKTGSGQGILEFQTEIQVLSRIRHRHLVSLTGYCEENSEMILVYEFMEKGTLKEHLYGSNLPSLTWKQRLEICIGAARGLDYLHSSGSEGAIIHRDVKSTNILLDEHNIAKVADFGLSKIHNQ-DESNISINIKGTFGYLDPEYLQTHKLTEKSDVYAFGVVLLEVLFARPAIDPYLPHEEVNLSEWVMFCKSKGTIDEILDPSLIGQIETNSLKKFMEIAEKCLKEYGDERPSMRDVIWDLEYVLQLQMMTNRREAHEEDST 779          
BLAST of g.arboreum_cottongen_reftransV1_0002498 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 386.341 bits (991), Expect = 5.750e-124
Identity = 188/304 (61.84%), Postives = 232/304 (76.32%), Query Frame = 3
Query:    6 SNLGRFFSFQEILDATNKFDESLLLGVGGFGRVYTGTLEDG-TKVAVKRGNPRSEQGLAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLY---GTNLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDENFVAKVADFGLSKTGP-ALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPASLKKYGETAEKCLAEHGVDRPSMGDVLWNLEYALQLEETS 902
            ++L R FS  EI  ATN F++ L++GVGGFG VY G ++ G T VAVKR    S QG  EF TE+EMLSKLRH HLVSLIGYCDE +EM+LVYEYM +G L+ HL+    T+ PPLSWK+RLEICIGAARGL YLHTGA  +IIHRD+KTTNILLDENFV KV+DFGLS+ GP +  QTHVST VKG+FGYLDPEY+RRQ LTEKSDVYSFGVVL+EVLC RP     +P EQ ++  W  +  ++G +DQI+DS+L   +   SL+K+ E A +C+ + G++RP M DV+W LE+ALQL ET+
Sbjct:  500 ADLCRRFSIFEIKSATNDFEDKLIIGVGGFGSVYKGQIDGGATLVAVKRLEITSNQGAKEFETELEMLSKLRHVHLVSLIGYCDEDNEMVLVYEYMPHGTLKDHLFRRDKTSDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVTKVSDFGLSRVGPTSASQTHVSTVVKGTFGYLDPEYYRRQVLTEKSDVYSFGVVLLEVLCCRPIRMQSVPPEQADLIRWVKSNYRRGTVDQIIDSDLSADITSTSLEKFCEIAVRCVQDRGMERPPMNDVVWALEFALQLHETA 803          
BLAST of g.arboreum_cottongen_reftransV1_0002498 vs. ExPASy Swiss-Prot
Match: Y5389_ARATH (Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana GN=At5g38990 PE=2 SV=1)

HSP 1 Score: 382.489 bits (981), Expect = 1.522e-122
Identity = 188/304 (61.84%), Postives = 230/304 (75.66%), Query Frame = 3
Query:    6 SNLGRFFSFQEILDATNKFDESLLLGVGGFGRVYTGTLEDG-TKVAVKRGNPRSEQGLAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGTNL---PPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDENFVAKVADFGLSKTGP-ALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPASLKKYGETAEKCLAEHGVDRPSMGDVLWNLEYALQLEETS 902
            S+L R FS  EI  ATN F+E L++GVGGFG VY G ++ G T VAVKR    S QG  EF TE+EMLSKLRH HLVSLIGYCD+ +EM+LVYEYM +G L+ HL+  +    PPLSWK+RLEICIGAARGL YLHTGA  +IIHRD+KTTNILLDENFVAKV+DFGLS+ GP +  QTHVST VKG+FGYLDPEY+RRQ LTEKSDVYSFGVVL+EVLC RP     +P EQ ++  W  +   K  +DQI+DS+L   +   S++K+ E A +C+ + G++RP M DV+W LE+ALQL ET+
Sbjct:  507 SDLCRRFSIYEIKSATNDFEEKLIIGVGGFGSVYKGRIDGGATLVAVKRLEITSNQGAKEFDTELEMLSKLRHVHLVSLIGYCDDDNEMVLVYEYMPHGTLKDHLFRRDKASDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVAKVSDFGLSRVGPTSASQTHVSTVVKGTFGYLDPEYYRRQILTEKSDVYSFGVVLLEVLCCRPIRMQSVPPEQADLIRWVKSNFNKRTVDQIIDSDLTADITSTSMEKFCEIAIRCVQDRGMERPPMNDVVWALEFALQLHETA 810          
BLAST of g.arboreum_cottongen_reftransV1_0002498 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 270.781 bits (691), Expect = 3.546e-80
Identity = 140/304 (46.05%), Postives = 197/304 (64.80%), Query Frame = 3
Query:   24 FSFQEILDATNKFDESLLLGVGGFGRVYTGTLEDGTKVAVKRGNPRSEQGLAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYG--TNLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDENFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPASLKKYGETAEKCLAEHGVDRPSMGDVLWNLEYALQLEETSSALMEPDDN 929
            F+ + I  AT ++    L+G GGFG VY GTL+DG +VAVK  +  S QG  EF  E+ +LS ++H +LV L+GYC+E  + ILVY +M+NG L   LYG  +    L W  RL I +GAARGL YLHT   +S+IHRDVK++NILLD++  AKVADFG SK  P    ++VS  V+G+ GYLDPEY++ QQL+EKSDV+SFGVVL+E++  R  LN   PR + ++ EWA  + +   +D+I+D  + G  +  +L +  E A +CL  +   RP M D++  LE AL +E  +S  M+  D+
Sbjct:  586 FTLEYIEQATEQY--KTLIGEGGFGSVYRGTLDDGQEVAVKVRSSTSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEASKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDQSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKRPRIEWSLVEWAKPYIRASKVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIVRELEDALIIENNASEYMKSIDS 887          
BLAST of g.arboreum_cottongen_reftransV1_0002498 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 269.626 bits (688), Expect = 8.028e-80
Identity = 141/304 (46.38%), Postives = 195/304 (64.14%), Query Frame = 3
Query:   24 FSFQEILDATNKFDESLLLGVGGFGRVYTGTLEDGTKVAVKRGNPRSEQGLAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYG--TNLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDENFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPASLKKYGETAEKCLAEHGVDRPSMGDVLWNLEYALQLEETSSALMEPDDN 929
            F+ + I  AT K+    L+G GGFG VY GTL+DG +VAVK  +  S QG  EF  E+ +LS ++H +LV L+GYC+E  + ILVY +M+NG L   LYG       L W  RL I +GAARGL YLHT   +S+IHRDVK++NILLD +  AKVADFG SK  P    ++VS  V+G+ GYLDPEY++ QQL+EKSDV+SFGVVL+E++  R  LN   PR + ++ EWA  + +   +D+I+D  + G  +  +L +  E A +CL  +   RP M D++  LE AL +E  +S  M+  D+
Sbjct:  585 FTLEYIELATEKY--KTLIGEGGFGSVYRGTLDDGQEVAVKVRSATSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEPAKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKRPRVEWSLVEWAKPYIRASKVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIVRELEDALIIENNASEYMKSIDS 886          
BLAST of g.arboreum_cottongen_reftransV1_0002498 vs. ExPASy Swiss-Prot
Match: Y5573_ARATH (Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g04300 OS=Arabidopsis thaliana GN=At2g04300 PE=3 SV=2)

HSP 1 Score: 263.848 bits (673), Expect = 6.614e-78
Identity = 134/301 (44.52%), Postives = 188/301 (62.46%), Query Frame = 3
Query:   18 RFFSFQEILDATNKFDESLLLGVGGFGRVYTGTLEDGTKVAVKRGNPRSEQGLAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGTN-LPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDENFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPASLKKYGETAEKCLAEHGVDRPSMGDVLWNLEYALQLEETSSALME 917
            R F++ E++  TN F++  +LG GGFG VY GT+ D  +VAVK  +P S QG  EF+ E+E+L ++ H++LV L+GYCDE   + L+YEYMA G L+ H+ G   +  L WK RL+I   +A+GL YLH G    ++HRDVKTTNILLDE+F AK+ADFGLS++ P   +T V T V G+ GYLDPEY+R   L EKSDVYSFG+VL+E++  +  +N    RE+ +IAEW      KG +  I+D    G  +  S+ +  E A  C+      RP+M  V+  L   L  E +   + +
Sbjct:  570 RRFTYSEVVKMTNNFEK--ILGKGGFGMVYHGTVNDAEQVAVKMLSPSSSQGYKEFKAEVELLLRVHHKNLVGLVGYCDEGENLSLIYEYMAKGDLKEHMLGNQGVSILDWKTRLKIVAESAQGLEYLHNGCKPPMVHRDVKTTNILLDEHFQAKLADFGLSRSFPLEGETRVDTVVAGTPGYLDPEYYRTNWLNEKSDVYSFGIVLLEIITNQHVINQ--SREKPHIAEWVGVMLTKGDIKSIIDPKFSGDYDAGSVWRAVELAMSCVNPSSTGRPTMSQVVIELNECLASENSRRGMSQ 866          
BLAST of g.arboreum_cottongen_reftransV1_0002498 vs. ExPASy Swiss-Prot
Match: RLK6_ARATH (Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 9.859e-78
Identity = 136/293 (46.42%), Postives = 187/293 (63.82%), Query Frame = 3
Query:   18 RFFSFQEILDATNKFDESLLLGVGGFGRVYTGTLEDGTKVAVKRGNPRSEQGLAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGTNLPP-LSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDENFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPASLKKYGETAEKCLAEHGVDRPSMGDVLWNLEYALQLE 893
            R F++ E++  TN F+   +LG GGFG VY GT+ +  +VAVK  +  S QG  EF+ E+E+L ++ H++LV L+GYCDE   + L+YEYMANG LR H+ G      L+W+ RL+I + +A+GL YLH G    ++HRDVKTTNILL+E+  AK+ADFGLS++ P   +THVST V G+ GYLDPEY+R   L EKSDVYSFG+VL+E++  +  +N    RE+ +IAEW      KG +  IMD  L G  +  S+ +  E A  CL      RP+M  V+  L   L  E
Sbjct:  580 RRFTYSEVVTMTNNFER--VLGKGGFGMVYHGTVNNTEQVAVKMLSHSSSQGYKEFKAEVELLLRVHHKNLVGLVGYCDEGENLALIYEYMANGDLREHMSGKRGGSILNWETRLKIVVESAQGLEYLHNGCKPPMVHRDVKTTNILLNEHLHAKLADFGLSRSFPIEGETHVSTVVAGTPGYLDPEYYRTNWLNEKSDVYSFGIVLLEIITNQLVINQ--SREKPHIAEWVGLMLTKGDIQNIMDPKLYGDYDSGSVWRAVELAMSCLNPSSARRPTMSQVVIELNECLSYE 868          
BLAST of g.arboreum_cottongen_reftransV1_0002498 vs. ExPASy Swiss-Prot
Match: Y2289_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g28960 OS=Arabidopsis thaliana GN=At2g28960 PE=2 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 1.408e-77
Identity = 138/299 (46.15%), Postives = 187/299 (62.54%), Query Frame = 3
Query:   24 FSFQEILDATNKFDESLLLGVGGFGRVYTGTLEDGTKVAVKRGNPRSEQGLAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGTNL-PPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDENFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDSNLVGKVNPASLKKYGETAEKCLAEHGVDRPSMGDVLWNLEYALQLEETSSALME 917
            F++ E+   T+ F+   +LG GGFG VY G L     +AVK  +  S QG  EF+ E+E+L ++ H +LVSL+GYCDE S + L+YEY  NG L+ HL G     PL W  RL+I +  A+GL YLHTG    ++HRDVKTTNILLDE+F AK+ADFGLS++ P   +THVSTAV G+ GYLDPEY+R  +L EKSDVYSFG+VL+E++ +RP +     RE+ +IA W      KG ++ ++D  L     P S+ K  E A  C+      RP+M  V   L+  L LE +   + E
Sbjct:  563 FTYSEVEALTDNFER--VLGEGGFGVVYHGILNGTQPIAVKLLSQSSVQGYKEFKAEVELLLRVHHVNLVSLVGYCDEESNLALLYEYAPNGDLKQHLSGERGGSPLKWSSRLKIVVETAQGLEYLHTGCKPPMVHRDVKTTNILLDEHFQAKLADFGLSRSFPVGGETHVSTAVAGTPGYLDPEYYRTNRLNEKSDVYSFGIVLLEIITSRPVIQQT--REKPHIAAWVGYMLTKGDIENVVDPRLNRDYEPTSVWKALEIAMSCVNPSSEKRPTMSQVTNELKQCLTLENSKRGVRE 857          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0002498 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
K4CXL8_SOLLC0.000e+091.16Uncharacterized protein OS=Solanum lycopersicum GN... [more]
D7MU84_ARALL0.000e+090.11Putative uncharacterized protein OS=Arabidopsis ly... [more]
A0A078JC52_BRANA0.000e+089.86BnaA10g28720D protein OS=Brassica napus GN=BnaA10g... [more]
M1CCC6_SOLTU0.000e+090.88Uncharacterized protein OS=Solanum tuberosum GN=PG... [more]
V4LT46_EUTSA0.000e+089.86Uncharacterized protein OS=Eutrema salsugineum GN=... [more]

Pages

back to top
BLAST of g.arboreum_cottongen_reftransV1_0002498 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
ANX1_ARATH1.626e-14860.83Receptor-like protein kinase ANXUR1 OS=Arabidopsis... [more]
Y2393_ARATH1.396e-14666.67Probable receptor-like protein kinase At2g39360 OS... [more]
Y2232_ARATH8.574e-12860.32Probable receptor-like protein kinase At2g23200 OS... [more]
Y5900_ARATH5.750e-12461.84Putative receptor-like protein kinase At5g39000 OS... [more]
Y5389_ARATH1.522e-12261.84Probable receptor-like protein kinase At5g38990 OS... [more]
NORK_MEDTR3.546e-8046.05Nodulation receptor kinase OS=Medicago truncatula ... [more]
NORK_PEA8.028e-8046.38Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
Y5573_ARATH6.614e-7844.52Putative leucine-rich repeat receptor-like serine/... [more]
RLK6_ARATH9.859e-7846.42Receptor-like protein kinase At3g21340 OS=Arabidop... [more]
Y2289_ARATH1.408e-7746.15Probable LRR receptor-like serine/threonine-protei... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000719Protein kinase domainSMARTSM00220serkin_6coord: 1..227
e-value: 2.8E-10
score: 12.4
IPR000719Protein kinase domainPROSITEPS50011PROTEIN_KINASE_DOMcoord: 1..227
score: 29.63
NoneNo IPR availableGENE3D1.10.510.10coord: 31..235
e-value: 4.1E-41
score: 139.8
NoneNo IPR availableGENE3D3.30.200.20coord: 1..30
e-value: 1.6E-9
score: 37.1
NoneNo IPR availablePANTHERPTHR27003:SF37INTERLEUKIN-1 RECEPTOR-ASSOCIATED KINASE 4 PROTEIN-RELATEDcoord: 1..293
NoneNo IPR availablePANTHERPTHR27003FAMILY NOT NAMEDcoord: 1..293
IPR001245Serine-threonine/tyrosine-protein kinase catalytic domainPFAMPF07714Pkinase_Tyrcoord: 1..221
e-value: 1.4E-38
score: 132.6
IPR008271Serine/threonine-protein kinase, active sitePROSITEPS00108PROTEIN_KINASE_STcoord: 74..86
IPR011009Protein kinase-like domainSUPERFAMILY56112Protein kinase-like (PK-like)coord: 1..240

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0002498 ID=g.arboreum_cottongen_reftransV1_0002498; Name=g.arboreum_cottongen_reftransV1_0002498; organism=Gossypium arboreum; type=contig; length=1203bp
CTTCCTCCAATCTTGGCCGCTTCTTCTCCTTCCAAGAGATCCTTGATGCG
ACCAACAAATTTGATGAGAGCCTACTTCTTGGAGTTGGTGGTTTCGGAAG
AGTCTACACCGGCACTCTTGAAGATGGGACTAAAGTTGCTGTCAAAAGAG
GTAATCCCAGATCCGAACAAGGTCTTGCTGAATTTCGCACCGAAATTGAA
ATGCTATCTAAACTTCGCCATCGCCACCTTGTCTCTCTTATTGGATATTG
TGATGAAAGATCGGAAATGATTCTTGTTTACGAGTATATGGCTAATGGAC
CCCTTAGAAGTCATCTTTATGGAACAAATCTACCTCCTCTGTCATGGAAG
CAACGACTTGAAATATGTATTGGTGCTGCTAGGGGACTTCATTATCTCCA
CACTGGTGCAGCCCAAAGCATTATTCACCGTGATGTGAAGACAACAAATA
TTCTCTTGGATGAGAATTTTGTAGCCAAAGTAGCAGATTTTGGTCTTTCA
AAAACCGGTCCAGCTTTAGATCAGACACATGTGAGTACTGCTGTTAAGGG
TAGCTTCGGTTACCTTGACCCTGAATATTTCCGGAGGCAGCAACTTACGG
AGAAGTCTGATGTGTATTCATTTGGGGTCGTTCTGATGGAAGTTCTCTGC
ACTAGGCCGGCTTTAAATCCTGTTCTCCCGAGAGAACAAGTTAATATCGC
TGAATGGGCAATGACTTGGCAGAAGAAAGGTATGTTAGATCAAATCATGG
ACTCTAATCTGGTGGGGAAAGTGAATCCCGCTTCTCTTAAGAAATACGGA
GAGACAGCTGAAAAGTGCCTGGCTGAGCACGGGGTTGACAGGCCATCCAT
GGGAGATGTATTATGGAACCTTGAATATGCTCTTCAGCTGGAAGAGACTT
CATCAGCACTAATGGAACCAGATGATAACAGTACCAACCATATCCCAGCC
ATTCAGACACCACTTGAGCCATTCGATAACAGTGTGAGCATGATCGACGG
TAATTCCGGCACTGATGATGATGCTGAAGATGCTGCTACTAGTGCAGTAT
TTTCACAACTCGTAAATCCTCGTGGAAGATAGACGGTAATTCCGGCAATG
GACATCCTGCTGAAAAATCCGGTTCTCCTTGCTGGCTTTGCTTGAGAGAA
TACTTGGAAAATTCCCAAGAGGTTTAATGAAGGTTTCTTTTTTTTTTTTT
TTT
back to top
Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR000719Prot_kinase_dom
IPR001245Ser-Thr/Tyr_kinase_cat_dom
IPR008271Ser/Thr_kinase_AS
IPR011009Kinase-like_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0004672protein kinase activity
Vocabulary: Biological Process
TermDefinition
GO:0006468protein phosphorylation