g.arboreum_cottongen_reftransV1_0017271, g.arboreum_cottongen_reftransV1_0017271 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0017271
Unique Nameg.arboreum_cottongen_reftransV1_0017271
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length681
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr1chromosomeg.arboreum_cottongen_reftransV1_0017271:1..681 .
Chr1:140594834..140595641 -
Homology
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0017271 vs. ExPASy TrEMBL
Match: A0A0B0MRL0_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_26745 PE=4 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 2.703e-36
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 2 
Query:  125 MRLKVRFGNRSTKMRKRQVXXXXXXXXXXXXXXXXXXXXXXXYAECQKNHAAGVGGYAVDGCREFMASXXXXXXXXXXXXXXXXHRNFHRREVETEVACDCSSPPPFNGA 454
            MRLKVRFGNRSTKMRKRQVVLRREEPPRSSSTNSSLTSRSVRYAECQKNHAAGVGGYAVDGCREFMASGEEGTTAALTCAACGCHRNFHRREVETEVACDCSSPPPFNGA
Sbjct:    1 MRLKVRFGNRSTKMRKRQVVLRREEPPRSSSTNSSLTSRSVRYAECQKNHAAGVGGYAVDGCREFMASGEEGTTAALTCAACGCHRNFHRREVETEVACDCSSPPPFNGA 110
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0017271 vs. ExPASy TrEMBL
Match: A0A0D2Q3N5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G239100 PE=4 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.089e-35
Identity = 109/110 (99.09%), Postives = 109/110 (99.09%), Query Frame = 2 
Query:  125 MRLKVRFGNRSTKMRKRQVXXXXXXXXXXXXXXXXXXXXXXXYAECQKNHAAGVGGYAVDGCREFMASXXXXXXXXXXXXXXXXHRNFHRREVETEVACDCSSPPPFNGA 454
            MRLKVRFGNRSTKMRKRQVVLRREEPPRSSSTNSSLTSRSVRYAECQKNHAAGVGGYAVDGCREFMASGEEGTTAALTCAACGCHRNFHRREVETEVACDCSSPPP NGA
Sbjct:    1 MRLKVRFGNRSTKMRKRQVVLRREEPPRSSSTNSSLTSRSVRYAECQKNHAAGVGGYAVDGCREFMASGEEGTTAALTCAACGCHRNFHRREVETEVACDCSSPPPSNGA 110
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0017271 vs. ExPASy TrEMBL
Match: A0A0D2M2F0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G239100 PE=4 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 8.256e-33
Identity = 108/115 (93.91%), Postives = 109/115 (94.78%), Query Frame = 2 
Query:  125 MRLK-----VRFGNRSTKMRKRQVXXXXXXXXXXXXXXXXXXXXXXXYAECQKNHAAGVGGYAVDGCREFMASXXXXXXXXXXXXXXXXHRNFHRREVETEVACDCSSPPPFNGA 454
            MRLK     +RFGNRSTKMRKRQVVLRREEPPRSSSTNSSLTSRSVRYAECQKNHAAGVGGYAVDGCREFMASGEEGTTAALTCAACGCHRNFHRREVETEVACDCSSPPP NGA
Sbjct:    1 MRLKGSPSLIRFGNRSTKMRKRQVVLRREEPPRSSSTNSSLTSRSVRYAECQKNHAAGVGGYAVDGCREFMASGEEGTTAALTCAACGCHRNFHRREVETEVACDCSSPPPSNGA 115
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0017271 vs. ExPASy TrEMBL
Match: A0A0D2QV52_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G239100 PE=4 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.142e-25
Identity = 96/97 (98.97%), Postives = 96/97 (98.97%), Query Frame = 2 
Query:  164 MRKRQVXXXXXXXXXXXXXXXXXXXXXXXYAECQKNHAAGVGGYAVDGCREFMASXXXXXXXXXXXXXXXXHRNFHRREVETEVACDCSSPPPFNGA 454
            MRKRQVVLRREEPPRSSSTNSSLTSRSVRYAECQKNHAAGVGGYAVDGCREFMASGEEGTTAALTCAACGCHRNFHRREVETEVACDCSSPPP NGA
Sbjct:    1 MRKRQVVLRREEPPRSSSTNSSLTSRSVRYAECQKNHAAGVGGYAVDGCREFMASGEEGTTAALTCAACGCHRNFHRREVETEVACDCSSPPPSNGA 97
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0017271 vs. ExPASy TrEMBL
Match: B9IJX4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s11900g PE=4 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 4.240e-22
Identity = 79/94 (84.04%), Postives = 85/94 (90.43%), Query Frame = 2 
Query:  155 STKMRKRQVXXXXXXXXXXXXXXXXXXXXXXXYAECQKNHAAGVGGYAVDGCREFMASXXXXXXXXXXXXXXXXHRNFHRREVETEVACDCSSP 436
            +++MRKRQVV+RR E P  SST SS T R+V+Y ECQKNHAAGVGGYAVDGCREFMASGEEGT AALTCAACGCHRNFHRREVETEVACDCSSP
Sbjct:   58 TSQMRKRQVVVRRSEEPSRSSTTSSFTIRNVKYGECQKNHAAGVGGYAVDGCREFMASGEEGTAAALTCAACGCHRNFHRREVETEVACDCSSP 151
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0017271 vs. ExPASy TrEMBL
Match: A0A061EGD2_THECC (Mini zinc finger 2 isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_018545 PE=4 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.902e-22
Identity = 84/115 (73.04%), Postives = 92/115 (80.00%), Query Frame = 2 
Query:  110 GYGQYMRLKVRFGNRSTKMRKRQVXXXXXXXXXXXXXXXXXXXXXXXYAECQKNHAAGVGGYAVDGCREFMASXXXXXXXXXXXXXXXXHRNFHRREVETEVACDCSSPPPFNGA 454
            G+G     K  FG+R   MRKRQVV+RREEPPRS++ +S        Y ECQKNHAAGVGGYAVDGCREFMASGEEGT+AALTCAACGCHRNFHRREVETEV C+CSSPP  NGA
Sbjct:   29 GFGAEGGDKEEFGDRG--MRKRQVVVRREEPPRSTTNSSLTIRSVR-YGECQKNHAAGVGGYAVDGCREFMASGEEGTSAALTCAACGCHRNFHRREVETEVVCECSSPPS-NGA 139
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0017271 vs. ExPASy TrEMBL
Match: A0A061EEU8_THECC (Mini zinc finger 2 isoform 1 OS=Theobroma cacao GN=TCM_018545 PE=4 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 9.817e-22
Identity = 84/115 (73.04%), Postives = 92/115 (80.00%), Query Frame = 2 
Query:  110 GYGQYMRLKVRFGNRSTKMRKRQVXXXXXXXXXXXXXXXXXXXXXXXYAECQKNHAAGVGGYAVDGCREFMASXXXXXXXXXXXXXXXXHRNFHRREVETEVACDCSSPPPFNGA 454
            G+G     K  FG+R   MRKRQVV+RREEPPRS++ +S        Y ECQKNHAAGVGGYAVDGCREFMASGEEGT+AALTCAACGCHRNFHRREVETEV C+CSSPP  NGA
Sbjct:   26 GFGAEGGDKEEFGDRG--MRKRQVVVRREEPPRSTTNSSLTIRSVR-YGECQKNHAAGVGGYAVDGCREFMASGEEGTSAALTCAACGCHRNFHRREVETEVVCECSSPPS-NGA 136
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0017271 vs. ExPASy TrEMBL
Match: A0A0A0KVJ7_CUCSA (Transcription factor OS=Cucumis sativus GN=Csa_5G636500 PE=4 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.194e-20
Identity = 75/92 (81.52%), Postives = 77/92 (83.70%), Query Frame = 2 
Query:  164 MRKRQVXXXXXXXXXXXXXXXXXXXXXXXYAECQKNHAAGVGGYAVDGCREFMASXXXXXXXXXXXXXXXXHRNFHRREVETEVACDCSSPP 439
            MRKRQVVLRR E     S  SS T RSVRY ECQKNHAAGVGGYAVDGCREFMASG+EGTTA LTCAACGCHRNFHRR+V TEV CDCSS P
Sbjct:    1 MRKRQVVLRRSEESSRDSVASSFTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTTAGLTCAACGCHRNFHRRQVGTEVVCDCSSSP 92
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0017271 vs. ExPASy TrEMBL
Match: V4T4C3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012891mg PE=4 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.099e-19
Identity = 74/94 (78.72%), Postives = 82/94 (87.23%), Query Frame = 2 
Query:  155 STKMRKRQVXXXXXXXXXXXXXXXXXXXXXXXYAECQKNHAAGVGGYAVDGCREFMASXXXXXXXXXXXXXXXXHRNFHRREVETEVACDCSSP 436
            ++KMRKRQVVLRREEP R+S+ +S        YAECQKNHAAGVGGYAVDGCREFMASGEEGT AALTCAACGCHR+FHRREV+TEV C+CSSP
Sbjct:   86 TSKMRKRQVVLRREEPSRNSTASSVTVRSVR-YAECQKNHAAGVGGYAVDGCREFMASGEEGTAAALTCAACGCHRSFHRREVDTEVVCECSSP 178
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0017271 vs. ExPASy TrEMBL
Match: A0A067JT59_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19845 PE=4 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.922e-19
Identity = 75/91 (82.42%), Postives = 80/91 (87.91%), Query Frame = 2 
Query:  164 MRKRQVXXXXXXXXXXXXXXXXXXXXXXXYAECQKNHAAGVGGYAVDGCREFMASXXXXXXXXXXXXXXXXHRNFHRREVETEVACDCSSP 436
            MRKRQVV+RR E P  SS+ SS T RSV+Y ECQKNHAA VGGYAVDGCREFMASGEEGT+ ALTCAACGCHRNFHRREVETE+ CDCSSP
Sbjct:    1 MRKRQVVVRRTEEPSRSSSTSSFTIRSVKYGECQKNHAANVGGYAVDGCREFMASGEEGTSLALTCAACGCHRNFHRREVETELVCDCSSP 91
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0017271 vs. ExPASy Swiss-Prot
Match: MIF4_ORYSJ (Mini zinc finger protein 4 OS=Oryza sativa subsp. japonica GN=MIF4 PE=2 SV=2)

HSP 1 Score: 54.6842 bits (130), Expect = 1.621e-8
Identity = 40/61 (65.57%), Postives = 48/61 (78.69%), Query Frame = 2 
Query:  251 YAECQKNHAAGVGGYAVDGCREFMASXXXXXXXXXXXXXXXXHRNFHRREVETEVACDCSS 433
            Y EC++NHAA +GG+AVDGCREF+A GEEGT  AL CAACGCHR+FHRR V  +  C C +
Sbjct:   35 YGECRRNHAARMGGHAVDGCREFLAEGEEGTGGALRCAACGCHRSFHRRVVVVQQCCACDT 95
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0017271 vs. ExPASy Swiss-Prot
Match: ZHD3_ARATH (Zinc-finger homeodomain protein 3 OS=Arabidopsis thaliana GN=ZHD3 PE=1 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 1.764e-8
Identity = 42/70 (60.00%), Postives = 46/70 (65.71%), Query Frame = 2 
Query:  251 YAECQKNHAAGVGGYAVDGCREFMASXXXXXXXXXXXXXXXXHRNFHRREVETEVACDCSS------PPP 442
            Y EC KNHAA +GG A+DGC EFM SGEEG+  ALTC+ C CHRNFHRRE E E     S       PPP
Sbjct:   87 YKECLKNHAATMGGNAIDGCGEFMPSGEEGSIEALTCSVCNCHRNFHRRETEGEEKTFFSPYLNHHQPPP 156
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0017271 vs. ExPASy Swiss-Prot
Match: ZHD1_ORYSI (Zinc-finger homeodomain protein 1 OS=Oryza sativa subsp. indica GN=ZHD1 PE=3 SV=1)

HSP 1 Score: 56.225 bits (134), Expect = 3.894e-8
Identity = 39/53 (73.58%), Postives = 44/53 (83.02%), Query Frame = 2 
Query:  251 YAECQKNHAAGVGGYAVDGCREFMASXXXXXXXXXXXXXXXXHRNFHRREVET 409
            Y EC KNHA G+GG+AVDGC EFMA+GEEGT  AL CAAC CHRNFHR+E E+
Sbjct:   57 YRECLKNHAVGIGGHAVDGCGEFMAAGEEGTIDALRCAACNCHRNFHRKESES 109
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0017271 vs. ExPASy Swiss-Prot
Match: ZHD1_ORYSJ (Zinc-finger homeodomain protein 1 OS=Oryza sativa subsp. japonica GN=ZHD1 PE=2 SV=1)

HSP 1 Score: 56.225 bits (134), Expect = 3.932e-8
Identity = 39/53 (73.58%), Postives = 44/53 (83.02%), Query Frame = 2 
Query:  251 YAECQKNHAAGVGGYAVDGCREFMASXXXXXXXXXXXXXXXXHRNFHRREVET 409
            Y EC KNHA G+GG+AVDGC EFMA+GEEGT  AL CAAC CHRNFHR+E E+
Sbjct:   57 YRECLKNHAVGIGGHAVDGCGEFMAAGEEGTIDALRCAACNCHRNFHRKESES 109
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0017271 vs. ExPASy Swiss-Prot
Match: ZHD2_ARATH (Zinc-finger homeodomain protein 2 OS=Arabidopsis thaliana GN=ZHD1 PE=1 SV=1)

HSP 1 Score: 54.299 bits (129), Expect = 1.051e-7
Identity = 38/53 (71.70%), Postives = 43/53 (81.13%), Query Frame = 2 
Query:  251 YAECQKNHAAGVGGYAVDGCREFMASXXXXXXXXXXXXXXXXHRNFHRREVET 409
            Y EC KNHA  +GG+AVDGC EFM SGE+GT  AL CAACGCHRNFHR+E E+
Sbjct:   49 YRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACGCHRNFHRKETES 101
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0017271 vs. ExPASy Swiss-Prot
Match: ZHD8_ARATH (Zinc-finger homeodomain protein 8 OS=Arabidopsis thaliana GN=ZHD8 PE=1 SV=1)

HSP 1 Score: 53.5286 bits (127), Expect = 2.922e-7
Identity = 28/52 (53.85%), Postives = 33/52 (63.46%), Query Frame = 2 
Query:  251 YAECQKNHAAGVGGYAVDGCREFMASXXXXXXXXXXXXXXX--XHRNFHRRE 400
            Y EC KNHAAG+GG+A+DGC EFM S    +    +       CHRNFHRRE
Sbjct:   56 YKECLKNHAAGIGGHALDGCGEFMPSPSFNSNDPASLTCAACGCHRNFHRRE 107
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0017271 vs. ExPASy Swiss-Prot
Match: ZHD6_ARATH (Zinc-finger homeodomain protein 6 OS=Arabidopsis thaliana GN=ZHD6 PE=1 SV=1)

HSP 1 Score: 52.7582 bits (125), Expect = 4.733e-7
Identity = 36/52 (69.23%), Postives = 43/52 (82.69%), Query Frame = 2 
Query:  251 YAECQKNHAAGVGGYAVDGCREFMASXXXXXXXXXXXXXXXXHRNFHRREVE 406
            Y ECQKNHAA  GG+ VDGC EFM+SGEEGT  +L CAAC CHR+FHR+E++
Sbjct:   82 YRECQKNHAASSGGHVVDGCGEFMSSGEEGTVESLLCAACDCHRSFHRKEID 133
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0017271 vs. ExPASy Swiss-Prot
Match: ZHD7_ARATH (Zinc-finger homeodomain protein 7 OS=Arabidopsis thaliana GN=ZHD7 PE=1 SV=1)

HSP 1 Score: 51.9878 bits (123), Expect = 7.569e-7
Identity = 38/51 (74.51%), Postives = 41/51 (80.39%), Query Frame = 2 
Query:  251 YAECQKNHAAGVGGYAVDGCREFMASXXXXXXXXXXXXXXXXHRNFHRREV 403
            Y ECQKNHAA  GG+ VDGC EFMA GEEGT  AL CAAC CHR+FHR+EV
Sbjct:   60 YRECQKNHAASTGGHVVDGCCEFMAGGEEGTLGALKCAACNCHRSFHRKEV 110
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0017271 vs. ExPASy Swiss-Prot
Match: ZHD9_ARATH (Zinc-finger homeodomain protein 9 OS=Arabidopsis thaliana GN=ZHD9 PE=1 SV=1)

HSP 1 Score: 52.373 bits (124), Expect = 8.158e-7
Identity = 31/66 (46.97%), Postives = 37/66 (56.06%), Query Frame = 2 
Query:  251 YAECQKNHAAGVGGYAVDGCREFMASXXXXXXXXXXXXXXX--XHRNFHRREVETEVACDCSSPPP 442
            Y EC KNHAA +GG+A+DGC EFM S     +   +       CHRNFHRRE +   A     PPP
Sbjct:   52 YKECLKNHAAAIGGHALDGCGEFMPSPSSTPSDPTSLKCAACGCHRNFHRRETDDSSAV----PPP 113
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0017271 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0B0MRL0_GOSAR2.703e-36100.00Uncharacterized protein OS=Gossypium arboreum GN=F... [more]
A0A0D2Q3N5_GOSRA3.089e-3599.09Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2M2F0_GOSRA8.256e-3393.91Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2QV52_GOSRA3.142e-2598.97Uncharacterized protein OS=Gossypium raimondii GN=... [more]
B9IJX4_POPTR4.240e-2284.04Uncharacterized protein OS=Populus trichocarpa GN=... [more]
A0A061EGD2_THECC7.902e-2273.04Mini zinc finger 2 isoform 2 (Fragment) OS=Theobro... [more]
A0A061EEU8_THECC9.817e-2273.04Mini zinc finger 2 isoform 1 OS=Theobroma cacao GN... [more]
A0A0A0KVJ7_CUCSA6.194e-2081.52Transcription factor OS=Cucumis sativus GN=Csa_5G6... [more]
V4T4C3_9ROSI1.099e-1978.72Uncharacterized protein OS=Citrus clementina GN=CI... [more]
A0A067JT59_JATCU2.922e-1982.42Uncharacterized protein OS=Jatropha curcas GN=JCGZ... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0017271 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
MIF4_ORYSJ1.621e-865.57Mini zinc finger protein 4 OS=Oryza sativa subsp. ... [more]
ZHD3_ARATH1.764e-860.00Zinc-finger homeodomain protein 3 OS=Arabidopsis t... [more]
ZHD1_ORYSI3.894e-873.58Zinc-finger homeodomain protein 1 OS=Oryza sativa ... [more]
ZHD1_ORYSJ3.932e-873.58Zinc-finger homeodomain protein 1 OS=Oryza sativa ... [more]
ZHD2_ARATH1.051e-771.70Zinc-finger homeodomain protein 2 OS=Arabidopsis t... [more]
ZHD8_ARATH2.922e-753.85Zinc-finger homeodomain protein 8 OS=Arabidopsis t... [more]
ZHD6_ARATH4.733e-769.23Zinc-finger homeodomain protein 6 OS=Arabidopsis t... [more]
ZHD7_ARATH7.569e-774.51Zinc-finger homeodomain protein 7 OS=Arabidopsis t... [more]
ZHD9_ARATH8.158e-746.97Zinc-finger homeodomain protein 9 OS=Arabidopsis t... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domainPFAMPF04770ZF-HD_dimercoord: 41..93
e-value: 1.2E-30
score: 105.4
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domainTIGRFAMTIGR01566TIGR01566coord: 42..93
e-value: 1.0E-27
score: 94.3
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domainPRODOMPD125774coord: 43..105
e-value: 8.0E-17
score: 207.0
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domainPROSITEPS51523ZF_HD_DIMERcoord: 43..92
score: 26.346
NoneNo IPR availablePANTHERPTHR31948:SF12MINI ZINC FINGER PROTEIN 2coord: 11..105
NoneNo IPR availablePANTHERPTHR31948FAMILY NOT NAMEDcoord: 11..105

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0017271 ID=g.arboreum_cottongen_reftransV1_0017271; Name=g.arboreum_cottongen_reftransV1_0017271; organism=Gossypium arboreum; type=contig; length=681bp
TTCACAACGACCAGTCTAGGGTTTACTATTGAGAAATTAAATAAGAACAA
ATCAGAAATACCCATTCTCAAGTAAGAAGCTATGCTATAAATATGTAATT
TAGGGTTAGGGCTATGGCCAATACATGAGACTAAAAGTACGATTTGGGAA
TCGATCGACGAAAATGAGGAAGCGACAAGTGGTACTGAGAAGGGAGGAGC
CACCAAGAAGCAGCAGCACCAATTCATCGTTGACAAGTAGAAGTGTGAGA
TATGCAGAGTGCCAAAAGAACCATGCCGCTGGGGTCGGAGGTTATGCTGT
TGATGGGTGCCGGGAATTCATGGCCAGCGGTGAAGAAGGAACAACTGCAG
CCCTTACTTGTGCTGCTTGCGGCTGCCATAGGAATTTCCATAGAAGGGAA
GTTGAAACTGAGGTAGCTTGTGACTGTTCATCACCTCCTCCTTTCAATGG
AGCATAATATATATGTAGCTTTATTAAATAAAATCACTTCTCATGTTTGT
ATAAATGGAAGGCTTTAATCATGTAATCTACCTATATATTTGCATTCTGC
TTATATATATATATGTTTCTTGAAAGAATGGGTTTCTTTCATAGCTTGTT
TTTCTATTATATTAAAAGATCAAAAGTATTTGTATTCATGTTTGGTTTTA
TGAAGAAATTAATGGGTGTTTTCTTCCATGA
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR006456ZF_HD_homeobox_Cys/His_dimer