g.arboreum_cottongen_reftransV1_0009735, g.arboreum_cottongen_reftransV1_0009735 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0009735
Unique Nameg.arboreum_cottongen_reftransV1_0009735
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length303
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr7chromosomeg.arboreum_cottongen_reftransV1_0009735:1..303 .
Chr7:91525300..91525920 +
Homology
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BLAST of g.arboreum_cottongen_reftransV1_0009735 vs. ExPASy TrEMBL
Match: B9T6N4_RICCO (ATP binding protein, putative OS=Ricinus communis GN=RCOM_0254000 PE=4 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 1.419e-48
Identity = 81/100 (81.00%), Postives = 91/100 (91.00%), Query Frame = 3 
Query:    3 LHDGIKGGYDEEKFKPYIGFCSLREYLESELQKRYKEAAPATLALLEQRCSDVNIELARIDSKIQATSDVSHLRKSAMMHAAYISNHVGVLIDGAADPSP 302
            L DGIKGG+DEEKF+PYIGF SLR+YLESELQKRYKEAAPATLALLE+RC  V  ELA++DSKIQATSDV+HLR+SAM+H A ISNHVG LIDGAADP+P
Sbjct:  297 LCDGIKGGFDEEKFRPYIGFSSLRDYLESELQKRYKEAAPATLALLEERCCQVTTELAKMDSKIQATSDVAHLRRSAMLHTASISNHVGALIDGAADPAP 396
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BLAST of g.arboreum_cottongen_reftransV1_0009735 vs. ExPASy TrEMBL
Match: A0A0B2NRW3_GLYSO (Dynamin-related protein 5A OS=Glycine soja GN=glysoja_047974 PE=4 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 1.433e-48
Identity = 83/100 (83.00%), Postives = 92/100 (92.00%), Query Frame = 3 
Query:    3 LHDGIKGGYDEEKFKPYIGFCSLREYLESELQKRYKEAAPATLALLEQRCSDVNIELARIDSKIQATSDVSHLRKSAMMHAAYISNHVGVLIDGAADPSP 302
            L +G+KGG+DEEKFK YIGF  LR+YLESELQK+YKEAAPATLALLEQRCS++  ELAR+DSKIQATSDVSHLRKSAM+HAA ISNHVG LIDGAADPSP
Sbjct:  296 LQEGVKGGFDEEKFKSYIGFGRLRDYLESELQKKYKEAAPATLALLEQRCSELTSELARMDSKIQATSDVSHLRKSAMLHAASISNHVGALIDGAADPSP 395
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0009735 vs. ExPASy TrEMBL
Match: W9QV04_9ROSA (Dynamin-related protein 5A OS=Morus notabilis GN=L484_011321 PE=4 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 2.203e-48
Identity = 82/100 (82.00%), Postives = 93/100 (93.00%), Query Frame = 3 
Query:    3 LHDGIKGGYDEEKFKPYIGFCSLREYLESELQKRYKEAAPATLALLEQRCSDVNIELARIDSKIQATSDVSHLRKSAMMHAAYISNHVGVLIDGAADPSP 302
            L +G+KGG+DEEKFKPYIGF  LREYLESELQKRYKEAAPATLALLEQRCS+V+IELAR+DSKIQATSDV+ LR+ AM++AA ISNHVG LIDGAADP+P
Sbjct:  308 LREGVKGGFDEEKFKPYIGFGRLREYLESELQKRYKEAAPATLALLEQRCSEVSIELARMDSKIQATSDVAQLRRFAMLYAASISNHVGALIDGAADPAP 407
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0009735 vs. ExPASy TrEMBL
Match: A0A067JBZ4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08632 PE=4 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.015e-47
Identity = 79/100 (79.00%), Postives = 93/100 (93.00%), Query Frame = 3 
Query:    3 LHDGIKGGYDEEKFKPYIGFCSLREYLESELQKRYKEAAPATLALLEQRCSDVNIELARIDSKIQATSDVSHLRKSAMMHAAYISNHVGVLIDGAADPSP 302
            L DGIKGG+DE+KF+PYIGF SLR+YLESELQKRYKEAAPATLALLEQRC +V+ ELA++DSKIQATSDV+HLR+SAM++ A +SNHVG LIDGAADP+P
Sbjct:  302 LRDGIKGGFDEDKFRPYIGFSSLRDYLESELQKRYKEAAPATLALLEQRCGEVSNELAKMDSKIQATSDVAHLRRSAMLYTASVSNHVGALIDGAADPAP 401
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0009735 vs. ExPASy TrEMBL
Match: M5WGY8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001432mg PE=4 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.158e-47
Identity = 81/100 (81.00%), Postives = 90/100 (90.00%), Query Frame = 3 
Query:    3 LHDGIKGGYDEEKFKPYIGFCSLREYLESELQKRYKEAAPATLALLEQRCSDVNIELARIDSKIQATSDVSHLRKSAMMHAAYISNHVGVLIDGAADPSP 302
            L DG+KGG+DEEKF+PYIGF  LREYLESELQKRYKEAAPATLALLEQRCSDV  EL ++DSKIQATSDVS LR+SAM++AA ISNHV  LIDGAADP+P
Sbjct:  318 LRDGVKGGFDEEKFRPYIGFSCLREYLESELQKRYKEAAPATLALLEQRCSDVTSELDKMDSKIQATSDVSQLRRSAMLYAASISNHVATLIDGAADPAP 417
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0009735 vs. ExPASy TrEMBL
Match: F2EAZ2_HORVD (Predicted protein (Fragment) OS=Hordeum vulgare var. distichum PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.751e-47
Identity = 73/100 (73.00%), Postives = 89/100 (89.00%), Query Frame = 3 
Query:    3 LHDGIKGGYDEEKFKPYIGFCSLREYLESELQKRYKEAAPATLALLEQRCSDVNIELARIDSKIQATSDVSHLRKSAMMHAAYISNHVGVLIDGAADPSP 302
            LHDG+KGG++E+KF PYIGF  LR+YLESELQKRYKEAAPATLALLEQRCSDV+++L+R+DSK+QATSDVS LR+SAM+H A I  H+  L+DGA DP+P
Sbjct:    9 LHDGVKGGFNEDKFAPYIGFSCLRKYLESELQKRYKEAAPATLALLEQRCSDVSMDLSRLDSKLQATSDVSQLRRSAMLHVASICTHLRALLDGAVDPAP 108
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0009735 vs. ExPASy TrEMBL
Match: V7AM24_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G158800g PE=4 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 2.378e-47
Identity = 81/100 (81.00%), Postives = 90/100 (90.00%), Query Frame = 3 
Query:    3 LHDGIKGGYDEEKFKPYIGFCSLREYLESELQKRYKEAAPATLALLEQRCSDVNIELARIDSKIQATSDVSHLRKSAMMHAAYISNHVGVLIDGAADPSP 302
            L +G+KGG+DEEKFK YIGF  LR++LESELQK+YKEAAPATLALLEQRCS+V  ELAR+DSKIQATSDVSHLRK AM+H A ISNHVG LIDGAADPSP
Sbjct:  325 LREGVKGGFDEEKFKSYIGFGRLRDFLESELQKKYKEAAPATLALLEQRCSEVTSELARMDSKIQATSDVSHLRKFAMLHVASISNHVGALIDGAADPSP 424
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0009735 vs. ExPASy TrEMBL
Match: V7AIX7_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G158800g PE=4 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 3.290e-47
Identity = 81/100 (81.00%), Postives = 90/100 (90.00%), Query Frame = 3 
Query:    3 LHDGIKGGYDEEKFKPYIGFCSLREYLESELQKRYKEAAPATLALLEQRCSDVNIELARIDSKIQATSDVSHLRKSAMMHAAYISNHVGVLIDGAADPSP 302
            L +G+KGG+DEEKFK YIGF  LR++LESELQK+YKEAAPATLALLEQRCS+V  ELAR+DSKIQATSDVSHLRK AM+H A ISNHVG LIDGAADPSP
Sbjct:  325 LREGVKGGFDEEKFKSYIGFGRLRDFLESELQKKYKEAAPATLALLEQRCSEVTSELARMDSKIQATSDVSHLRKFAMLHVASISNHVGALIDGAADPSP 424
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0009735 vs. ExPASy TrEMBL
Match: A0A067F8N2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g003415mg PE=4 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 3.664e-47
Identity = 80/100 (80.00%), Postives = 90/100 (90.00%), Query Frame = 3 
Query:    3 LHDGIKGGYDEEKFKPYIGFCSLREYLESELQKRYKEAAPATLALLEQRCSDVNIELARIDSKIQATSDVSHLRKSAMMHAAYISNHVGVLIDGAADPSP 302
            L DGIKGGYDEEKFKPYIGF  LR+YLESELQKRYKEAAPATLALLEQRC++V  E++R+DSKIQATSDV+ LR+ AMM+AA IS HVG LIDGAADP+P
Sbjct:  304 LRDGIKGGYDEEKFKPYIGFGCLRDYLESELQKRYKEAAPATLALLEQRCNEVTTEMSRMDSKIQATSDVAQLRRFAMMYAASISTHVGALIDGAADPAP 403
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0009735 vs. ExPASy TrEMBL
Match: V4UG24_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10007467mg PE=4 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 4.139e-47
Identity = 80/100 (80.00%), Postives = 90/100 (90.00%), Query Frame = 3 
Query:    3 LHDGIKGGYDEEKFKPYIGFCSLREYLESELQKRYKEAAPATLALLEQRCSDVNIELARIDSKIQATSDVSHLRKSAMMHAAYISNHVGVLIDGAADPSP 302
            L DGIKGGYDEEKFKPYIGF  LR+YLESELQKRYKEAAPATLALLEQRC++V  E++R+DSKIQATSDV+ LR+ AMM+AA IS HVG LIDGAADP+P
Sbjct:  304 LRDGIKGGYDEEKFKPYIGFGCLRDYLESELQKRYKEAAPATLALLEQRCNEVTTEMSRMDSKIQATSDVAQLRRFAMMYAASISTHVGALIDGAADPAP 403
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0009735 vs. ExPASy Swiss-Prot
Match: DRP5A_ARATH (Dynamin-related protein 5A OS=Arabidopsis thaliana GN=DRP5A PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 5.483e-44
Identity = 72/100 (72.00%), Postives = 89/100 (89.00%), Query Frame = 3 
Query:    3 LHDGIKGGYDEEKFKPYIGFCSLREYLESELQKRYKEAAPATLALLEQRCSDVNIELARIDSKIQATSDVSHLRKSAMMHAAYISNHVGVLIDGAADPSP 302
            L +G+KGG+DEEKF+  IGF SLR++LESELQKRYKEAAPATLALLE+RCS+V  ++ R+D KIQATSDV+HLRK+AM++ A ISNHVG LIDGAA+P+P
Sbjct:  307 LREGVKGGFDEEKFRSCIGFGSLRDFLESELQKRYKEAAPATLALLEERCSEVTDDMLRMDMKIQATSDVAHLRKAAMLYTASISNHVGALIDGAANPAP 406
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0009735 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
B9T6N4_RICCO1.419e-4881.00ATP binding protein, putative OS=Ricinus communis ... [more]
A0A0B2NRW3_GLYSO1.433e-4883.00Dynamin-related protein 5A OS=Glycine soja GN=glys... [more]
W9QV04_9ROSA2.203e-4882.00Dynamin-related protein 5A OS=Morus notabilis GN=L... [more]
A0A067JBZ4_JATCU1.015e-4779.00Uncharacterized protein OS=Jatropha curcas GN=JCGZ... [more]
M5WGY8_PRUPE1.158e-4781.00Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
F2EAZ2_HORVD1.751e-4773.00Predicted protein (Fragment) OS=Hordeum vulgare va... [more]
V7AM24_PHAVU2.378e-4781.00Uncharacterized protein OS=Phaseolus vulgaris GN=P... [more]
V7AIX7_PHAVU3.290e-4781.00Uncharacterized protein OS=Phaseolus vulgaris GN=P... [more]
A0A067F8N2_CITSI3.664e-4780.00Uncharacterized protein OS=Citrus sinensis GN=CISI... [more]
V4UG24_9ROSI4.139e-4780.00Uncharacterized protein OS=Citrus clementina GN=CI... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0009735 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
DRP5A_ARATH5.483e-4472.00Dynamin-related protein 5A OS=Arabidopsis thaliana... [more]
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11566:SF44DYNAMIN-LIKE PROTEIN Ccoord: 5..98
IPR022812Dynamin superfamilyPANTHERPTHR11566DYNAMINcoord: 5..98

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0009735 ID=g.arboreum_cottongen_reftransV1_0009735; Name=g.arboreum_cottongen_reftransV1_0009735; organism=Gossypium arboreum; type=contig; length=303bp
ATTTGCATGATGGAATCAAGGGAGGTTATGATGAAGAAAAGTTCAAGCCC
TATATTGGTTTTTGTTCTTTGAGGGAGTATTTGGAATCAGAACTACAAAA
GAGATACAAAGAAGCTGCCCCAGCTACACTGGCATTGCTTGAGCAGCGCT
GCAGTGATGTTAACATTGAGCTGGCAAGAATTGACTCCAAAATACAAGCA
ACTTCCGATGTTTCTCATCTTCGAAAATCAGCCATGATGCATGCGGCATA
TATAAGCAATCATGTGGGGGTTTTGATCGATGGAGCAGCAGATCCTTCCC
CCG
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR022812Dynamin