g.arboreum_cottongen_reftransV1_0018408, g.arboreum_cottongen_reftransV1_0018408 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0018408
Unique Nameg.arboreum_cottongen_reftransV1_0018408
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length599
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr9chromosomeg.arboreum_cottongen_reftransV1_0018408:1..599 .
Chr9:63050052..63050650 -
Homology
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0018408 vs. ExPASy TrEMBL
Match: A0A0D2V2B9_GOSRA (Potassium transporter OS=Gossypium raimondii GN=B456_012G060500 PE=3 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 2.809e-89
Identity = 161/208 (77.40%), Postives = 177/208 (85.10%), Query Frame = 2 
Query:    2 IHTELVSGIPAIFSHFVTNLLAFHQVVVFLCIKSVPVPHVSPGERFLVGRVGPKGYRLYRCIARYGYRDIHKDDIEFEKDLACSIAEFIRSERPEH---ITRMENDEKMTVIGTSSSNSQGVSICADGGDDHEDSSEIVS------AKSPEKPRKRVRFVVPESPRIDNXXXXXXXXXXXXXXSGMAFILGHSYVRAKKGSNLMKRIV 598
            IHTELVSGIPAIFSHFVTNL AFHQVVVFLCIKSVPVPHVSP ERFLVGRVGPK YRLYRCIARYGYRD+HKDD+EFEKDL CSIAEFIRSERPE    I   ENDE+MTVIGTSSSN +G+ +  DG     DSS+IV       AKSPEK RKRVRF+VPES +I+N  +EEL+ELMEARE+GMAFILGHSYVRAKKGS+L+K+IV
Sbjct:  538 IHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVSPKERFLVGRVGPKEYRLYRCIARYGYRDVHKDDLEFEKDLICSIAEFIRSERPECSIPILDSENDERMTVIGTSSSNLEGIRMHEDG---DVDSSQIVGTSEPRVAKSPEKVRKRVRFIVPESSQINNGVKEELQELMEAREAGMAFILGHSYVRAKKGSSLIKKIV 742
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0018408 vs. ExPASy TrEMBL
Match: A0A0D2VW07_GOSRA (Potassium transporter OS=Gossypium raimondii GN=B456_012G060500 PE=3 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 3.112e-89
Identity = 161/208 (77.40%), Postives = 177/208 (85.10%), Query Frame = 2 
Query:    2 IHTELVSGIPAIFSHFVTNLLAFHQVVVFLCIKSVPVPHVSPGERFLVGRVGPKGYRLYRCIARYGYRDIHKDDIEFEKDLACSIAEFIRSERPEH---ITRMENDEKMTVIGTSSSNSQGVSICADGGDDHEDSSEIVS------AKSPEKPRKRVRFVVPESPRIDNXXXXXXXXXXXXXXSGMAFILGHSYVRAKKGSNLMKRIV 598
            IHTELVSGIPAIFSHFVTNL AFHQVVVFLCIKSVPVPHVSP ERFLVGRVGPK YRLYRCIARYGYRD+HKDD+EFEKDL CSIAEFIRSERPE    I   ENDE+MTVIGTSSSN +G+ +  DG     DSS+IV       AKSPEK RKRVRF+VPES +I+N  +EEL+ELMEARE+GMAFILGHSYVRAKKGS+L+K+IV
Sbjct:  539 IHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVSPKERFLVGRVGPKEYRLYRCIARYGYRDVHKDDLEFEKDLICSIAEFIRSERPECSIPILDSENDERMTVIGTSSSNLEGIRMHEDG---DVDSSQIVGTSEPRVAKSPEKVRKRVRFIVPESSQINNGVKEELQELMEAREAGMAFILGHSYVRAKKGSSLIKKIV 743
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0018408 vs. ExPASy TrEMBL
Match: A0A072U5F4_MEDTR (Potassium transporter OS=Medicago truncatula GN=MTR_6g007697 PE=3 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 2.376e-88
Identity = 146/205 (71.22%), Postives = 174/205 (84.88%), Query Frame = 2 
Query:    2 IHTELVSGIPAIFSHFVTNLLAFHQVVVFLCIKSVPVPHVSPGERFLVGRVGPKGYRLYRCIARYGYRDIHKDDIEFEKDLACSIAEFIRSERPEH---ITRMENDEKMTVIGTSSSNSQGVSICADGGDDH---EDSSEIVSAKSPEKPRKRVRFVVPESPRIDNXXXXXXXXXXXXXXSGMAFILGHSYVRAKKGSNLMKRIV 598
            IHTELV+GIPAIFSHFVTNL AFHQVV+FLCIKSVPVPHV+P ERFLVGR+GPK YRLYRCIARYGYRDIHKDD+EFEKDL CSIAEFIRS+  E+   +   E+D KMTV+GTSSSNS+GV +  D  DD+   E +SE+   KSPE+ +KRVRFVVP+SPR+D + REEL ELMEA+E+GMAFI+ HSYVRAK+GS+ +K++V
Sbjct:  537 IHTELVAGIPAIFSHFVTNLPAFHQVVIFLCIKSVPVPHVAPRERFLVGRIGPKEYRLYRCIARYGYRDIHKDDMEFEKDLICSIAEFIRSDTSEYGLGLGSFEDDTKMTVVGTSSSNSEGVKMSEDDQDDNSQIEGTSELKEVKSPERVKKRVRFVVPDSPRMDIDTREELLELMEAKEAGMAFIMSHSYVRAKRGSSWIKKVV 741
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0018408 vs. ExPASy TrEMBL
Match: A0A059AGA0_EUCGR (Potassium transporter OS=Eucalyptus grandis GN=EUGRSUZ_J02183 PE=3 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 2.690e-88
Identity = 152/204 (74.51%), Postives = 174/204 (85.29%), Query Frame = 2 
Query:    2 IHTELVSGIPAIFSHFVTNLLAFHQVVVFLCIKSVPVPHVSPGERFLVGRVGPKGYRLYRCIARYGYRDIHKDDIEFEKDLACSIAEFIRSERPEHITRMEN--DEKMTVIGTSSSNSQGVSICADGGDDHE---DSSEIVSAKSPEKPRKRVRFVVPESPRIDNXXXXXXXXXXXXXXSGMAFILGHSYVRAKKGSNLMKRIV 598
            IHTELVSGIPAIFSHFVTNL AFHQVVVFLCIKSVPVPHV P ERFLVGRVGPK YR+YRCIARYGYRD+HKDD+EFE+DL CSIAE +RSERPE   RMEN  DEKMTV+GTSSSN +GV +C D     +    SSE+V   SP+K RKRVRF+VPESPR++ E REEL+ELMEARE+G+AFI+GHSYVRAK+GS+ MK++V
Sbjct:  535 IHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPKERFLVGRVGPKEYRVYRCIARYGYRDVHKDDLEFERDLFCSIAELVRSERPECTARMENTEDEKMTVVGTSSSNLEGVRLCEDDAGTSQKEGSSSELVEVISPQKLRKRVRFLVPESPRMERETREELKELMEAREAGLAFIMGHSYVRAKRGSSFMKKVV 738
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0018408 vs. ExPASy TrEMBL
Match: A0A067LKY5_JATCU (Potassium transporter OS=Jatropha curcas GN=JCGZ_09629 PE=3 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 1.747e-85
Identity = 148/204 (72.55%), Postives = 175/204 (85.78%), Query Frame = 2 
Query:    2 IHTELVSGIPAIFSHFVTNLLAFHQVVVFLCIKSVPVPHVSPGERFLVGRVGPKGYRLYRCIARYGYRDIHKDDIEFEKDLACSIAEFIRSERPEHITRME---NDEKMTVIGTSSSNSQGVSIC-ADGG-DDHEDSSEIVSAKSPEKPRKRVRFVVPESPRIDNXXXXXXXXXXXXXXSGMAFILGHSYVRAKKGSNLMKRIV 598
            IHT LVSGIPAIFSHFVTNL AFHQVV+FLCIKSVPVPHV P ERFLVGRVGPKGYRLYRCIARYGYRD+HKDD+EFEKDL CS+AEFIRSE+PE   R+E   +DE+MTV+GT SSN +GV +C AD    D   +SE+   +SP++ +KRVRF+VPESP+ID + +EELRELM+ARE+GMAFILGHSYVRAK+GS+ +K+IV
Sbjct:  537 IHTGLVSGIPAIFSHFVTNLPAFHQVVIFLCIKSVPVPHVRPEERFLVGRVGPKGYRLYRCIARYGYRDVHKDDVEFEKDLVCSVAEFIRSEKPETDIRIEDSADDERMTVVGTLSSNFEGVKLCEADANSSDMIGTSEMREIQSPKRSKKRVRFIVPESPQIDMDVQEELRELMQAREAGMAFILGHSYVRAKRGSSWLKKIV 740
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0018408 vs. ExPASy TrEMBL
Match: A0A0A0LFF8_CUCSA (Potassium transporter OS=Cucumis sativus GN=Csa_3G835810 PE=3 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 1.648e-84
Identity = 146/202 (72.28%), Postives = 174/202 (86.14%), Query Frame = 2 
Query:    2 IHTELVSGIPAIFSHFVTNLLAFHQVVVFLCIKSVPVPHVSPGERFLVGRVGPKGYRLYRCIARYGYRDIHKDDIEFEKDLACSIAEFIRSERPEHITRMEN---DEKMTVIGTSSSNSQGVSICADGGDDHEDSSEIVSAKSPEKPRKRVRFVVPESPRIDNXXXXXXXXXXXXXXSGMAFILGHSYVRAKKGSNLMKRIV 598
            I+TELV+GIPAIFSHFVTNL AFHQV+VFLCIKSVPVPHV PGERFLVGRVGPK YRLYRCIARYGYRDIHKDD+EFEKDL CSIAEFIRSE+ E   ++E+    E+MTV+GTSS+N  GV +C D G+  E +SE+   KSP+K RKRVRF+VPESP+++ EAR EL+ELMEARE+GMAFI+GHSYV+AK+GS  +K++V
Sbjct:  536 IYTELVAGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVRPGERFLVGRVGPKEYRLYRCIARYGYRDIHKDDMEFEKDLVCSIAEFIRSEKAETSVKLEDAEESERMTVVGTSSTNVDGVRMCEDEGETAE-TSEVREIKSPKKLRKRVRFLVPESPQMETEARRELQELMEAREAGMAFIMGHSYVKAKRGSGWVKKVV 736
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0018408 vs. ExPASy TrEMBL
Match: M0ZIA8_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400000501 PE=4 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 2.067e-84
Identity = 139/203 (68.47%), Postives = 168/203 (82.76%), Query Frame = 2 
Query:    2 IHTELVSGIPAIFSHFVTNLLAFHQVVVFLCIKSVPVPHVSPGERFLVGRVGPKGYRLYRCIARYGYRDIHKDDIEFEKDLACSIAEFIRSE----RPEHITRMENDEKMTVIGTSSSNSQGVSICADGGDDHEDSSEIVSAKSPEKPRKRVRFVVPESPRIDNXXXXXXXXXXXXXXSGMAFILGHSYVRAKKGSNLMKRIV 598
            IHTELV+GIPAIFSHF+TNL AFHQV+VFLCIKSVPVPHV P ERFLVGR+GPK YR+YRCIARYGYRDIH DD+EFEKDL CSIAEFIRSE      E +  ++ +E++TVIGT+S++  G+ IC D G      +E++   SPE PRKRVRF+VPESP++D   REEL+ELMEARE+GMAFILGH YVRAK+GS+L+K++V
Sbjct:  105 IHTELVTGIPAIFSHFITNLPAFHQVLVFLCIKSVPVPHVRPEERFLVGRIGPKEYRVYRCIARYGYRDIHMDDVEFEKDLVCSIAEFIRSEGRGQSFEAVEDIDANERLTVIGTTSTHIDGIRICEDNGGLTHVDTEMIEISSPEVPRKRVRFLVPESPQMDLSVREELQELMEAREAGMAFILGHCYVRAKRGSSLIKKLV 307
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0018408 vs. ExPASy TrEMBL
Match: M0ZIA7_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400000501 PE=4 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 2.632e-83
Identity = 139/203 (68.47%), Postives = 168/203 (82.76%), Query Frame = 2 
Query:    2 IHTELVSGIPAIFSHFVTNLLAFHQVVVFLCIKSVPVPHVSPGERFLVGRVGPKGYRLYRCIARYGYRDIHKDDIEFEKDLACSIAEFIRSE----RPEHITRMENDEKMTVIGTSSSNSQGVSICADGGDDHEDSSEIVSAKSPEKPRKRVRFVVPESPRIDNXXXXXXXXXXXXXXSGMAFILGHSYVRAKKGSNLMKRIV 598
            IHTELV+GIPAIFSHF+TNL AFHQV+VFLCIKSVPVPHV P ERFLVGR+GPK YR+YRCIARYGYRDIH DD+EFEKDL CSIAEFIRSE      E +  ++ +E++TVIGT+S++  G+ IC D G      +E++   SPE PRKRVRF+VPESP++D   REEL+ELMEARE+GMAFILGH YVRAK+GS+L+K++V
Sbjct:  223 IHTELVTGIPAIFSHFITNLPAFHQVLVFLCIKSVPVPHVRPEERFLVGRIGPKEYRVYRCIARYGYRDIHMDDVEFEKDLVCSIAEFIRSEGRGQSFEAVEDIDANERLTVIGTTSTHIDGIRICEDNGGLTHVDTEMIEISSPEVPRKRVRFLVPESPQMDLSVREELQELMEAREAGMAFILGHCYVRAKRGSSLIKKLV 425
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0018408 vs. ExPASy TrEMBL
Match: W0TR99_ACAMN (Potassium transporter OS=Acacia mangium PE=2 SV=1)

HSP 1 Score: 273.478 bits (698), Expect = 3.004e-83
Identity = 146/204 (71.57%), Postives = 170/204 (83.33%), Query Frame = 2 
Query:    2 IHTELVSGIPAIFSHFVTNLLAFHQVVVFLCIKSVPVPHVSPGERFLVGRVGPKGYRLYRCIARYGYRDIHKDDIEFEKDLACSIAEFIRSERPE---HITRMENDEKMTVIGTSSSNSQGVSICADGGD--DHEDSSEIVSAKSPEKPRKRVRFVVPESPRIDNXXXXXXXXXXXXXXSGMAFILGHSYVRAKKGSNLMKRIV 598
            IHTELVSGIPAIFSHFVTNL AFHQVVVFLCIKSVPVPHV P ERFLVGRVGPK YRLYRCIARYGYRDI KDD+EFE+DL CSIAEFIRS+  +    +  +E+D KMTV+GTS+S  +GV +C D  D    E +SE++  KSPEK RKRV FVVP+SP ID  A+EEL+ELMEARE+GMAFI+GHSYVRAK+GS+ +K++V
Sbjct:  537 IHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPAERFLVGRVGPKEYRLYRCIARYGYRDIQKDDMEFEQDLVCSIAEFIRSDTSKCGSELNNLEDDAKMTVVGTSASKLEGVRMCEDDLDSCQTEGTSEVMEFKSPEKVRKRVSFVVPDSPEIDLNAKEELQELMEAREAGMAFIMGHSYVRAKRGSSWIKKVV 740
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0018408 vs. ExPASy TrEMBL
Match: V7B7T1_PHAVU (Potassium transporter OS=Phaseolus vulgaris GN=PHAVU_008G152200g PE=3 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 8.255e-83
Identity = 147/207 (71.01%), Postives = 170/207 (82.13%), Query Frame = 2 
Query:    2 IHTELVSGIPAIFSHFVTNLLAFHQVVVFLCIKSVPVPHVSPGERFLVGRVGPKGYRLYRCIARYGYRDIHKDDIEFEKDLACSIAEFIRSERPEH---ITRMENDEKMTVIGTSSSNSQGVSICADGGDDH-----EDSSEIVSAKSPEKPRKRVRFVVPESPRIDNXXXXXXXXXXXXXXSGMAFILGHSYVRAKKGSNLMKRIV 598
            IHTELVSGIPAIFSHFVTNL AFHQVV+FLC+KSVPVPHV P ERFLVGR+GPK YRLYRCIARYGYRD HKDDIEFEKDL CSIAEFIRS+  E        E+D KMTVIGTS+SNS+G+ +C D  +++     EDS E+   KSPE  RKRVRFV+PESP ID  AREEL+ELM+ARE GMAFI+GHSYV+AK+GS+ +K++V
Sbjct:  537 IHTELVSGIPAIFSHFVTNLPAFHQVVIFLCVKSVPVPHVRPEERFLVGRIGPKEYRLYRCIARYGYRDFHKDDIEFEKDLICSIAEFIRSDTSESGPGFESFEDDTKMTVIGTSASNSEGIRMCEDDHNNNNSSQIEDSLEVRVVKSPEIVRKRVRFVLPESPLIDLGAREELQELMQAREGGMAFIMGHSYVKAKRGSSWIKKLV 743
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0018408 vs. ExPASy Swiss-Prot
Match: POT8_ARATH (Potassium transporter 8 OS=Arabidopsis thaliana GN=POT8 PE=2 SV=2)

HSP 1 Score: 256.529 bits (654), Expect = 9.887e-79
Identity = 139/206 (67.48%), Postives = 165/206 (80.10%), Query Frame = 2 
Query:    2 IHTELVSGIPAIFSHFVTNLLAFHQVVVFLCIKSVPVPHVSPGERFLVGRVGPKGYRLYRCIARYGYRDIHKDDIEFEKDLACSIAEFIRSERPEHIT-RMEN----DEKMTVIGTSSSNSQGVSICADGGDDHED---SSEIVSAKSPEKPRKRVRFVVPESPRIDNXXXXXXXXXXXXXXSGMAFILGHSYVRAKKGSNLMKRI 595
            I+TELVSGIPAIFSHF+TNL AFHQVVVFLC+KSVPVPHV P ERFLVGRVGPK YRLYRCIARYGYRD+HKDD+EFE DL CSIAEFIRS++P + +   EN    +E++TV+  SSSN +GV I  D G D ++   SSE++      + +KRVRFV+PES RID  A EEL EL EARE+GMAFI+GHSYVRAK GS++MK+I
Sbjct:  540 INTELVSGIPAIFSHFITNLPAFHQVVVFLCVKSVPVPHVKPEERFLVGRVGPKEYRLYRCIARYGYRDVHKDDVEFENDLICSIAEFIRSDKPLNYSPDPENESGINERLTVVAASSSNLEGVQIYEDDGSDKQEPSSSSEVIMVAPSPRFKKRVRFVLPESARIDRSAEEELTELTEAREAGMAFIMGHSYVRAKSGSSVMKKI 745
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0018408 vs. ExPASy Swiss-Prot
Match: POT6_ARATH (Potassium transporter 6 OS=Arabidopsis thaliana GN=POT6 PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 4.640e-64
Identity = 124/220 (56.36%), Postives = 157/220 (71.36%), Query Frame = 2 
Query:    2 IHTELVSGIPAIFSHFVTNLLAFHQVVVFLCIKSVPVPHVSPGERFLVGRVGPKGYRLYRCIARYGYRDIHKDDIEFEKDLACSIAEFIRSERPEHITRM----ENDEKMTVIGTSSSNSQGVSICADGGDDHEDSSEIVSAKSPEKP------------------RKRVRFVVPESPRIDNXXXXXXXXXXXXXXSGMAFILGHSYVRAKKGSNLMKRI 595
            IHTELVSG+PAIFSHFVTNL AFHQV+VFLC+KSVPVPHV P ERFLVGR+GPK +R+YRCI R+GYRD+HKDD EFE DL CSIAEFIR+E     T      E+D++M+V+GT S+  QG+       +DH +S        P+KP                  +KRVRFVVPE+P+I+ E R+EL EL EARE G+A+I+G++Y++AK GS L+KR+
Sbjct:  538 IHTELVSGVPAIFSHFVTNLPAFHQVLVFLCVKSVPVPHVRPQERFLVGRIGPKEFRIYRCIVRFGYRDVHKDDFEFEGDLVCSIAEFIRTEAETAATAAETNGEDDDRMSVVGTCSTYMQGI-------EDHYES----DIDDPDKPGTSEIRSPKPKKKSKSKVKKRVRFVVPETPKIEKETRQELMELTEAREGGVAYIMGNAYMKAKPGSGLLKRL 746
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0018408 vs. ExPASy Swiss-Prot
Match: HAK25_ORYSJ (Potassium transporter 25 OS=Oryza sativa subsp. japonica GN=HAK25 PE=2 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 2.849e-63
Identity = 123/206 (59.71%), Postives = 152/206 (73.79%), Query Frame = 2 
Query:    2 IHTELVSGIPAIFSHFVTNLLAFHQVVVFLCIKSVPVPHVSPGERFLVGRVGPKGYRLYRCIARYGYRDIHKDDIEFEKDLACSIAEFIRSERPEHITRMENDEKMTVIGTSSSNSQGVSICADGGD-------DHEDSSEIVSAKSPEKPRKRVRFVVPESPRIDNXXXXXXXXXXXXXXSGMAFILGHSYVRAKKGSNLMKRIV 598
            IHTELVSGIPAIFSHFVTNL AFHQV+VFLC+KSVPVPHV P ERFLVGR+GPK YRLYR I RYGYRD+ KDDIEFEKDL  SIAEFIRS    H   +E+ +K       SS S G+ +  + G+         E  ++I+S       RK+ RFV+P++ ++D+E R EL+ELM+ARE+GM+FILGHSY++AK GS+ +KRIV
Sbjct:  537 IHTELVSGIPAIFSHFVTNLPAFHQVLVFLCVKSVPVPHVQPEERFLVGRIGPKEYRLYRVIVRYGYRDVQKDDIEFEKDLVSSIAEFIRSGDSHHNGVLEDTDKSC--EKLSSISNGIPLWMEDGEVDASASPHKETDTQIISPN-----RKKARFVLPKNAQVDSEVRRELQELMDAREAGMSFILGHSYMKAKSGSSFIKRIV 735
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0018408 vs. ExPASy Swiss-Prot
Match: HAK10_ORYSJ (Potassium transporter 10 OS=Oryza sativa subsp. japonica GN=HAK10 PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.221e-56
Identity = 126/245 (51.43%), Postives = 152/245 (62.04%), Query Frame = 2 
Query:    2 IHTELVSGIPAIFSHFVTNLLAFHQVVVFLCIKSVPVPHVSPGERFLVGRVGPKGYRLYRCIARYGYRDIHKDDIEFEKDLACSIAEFIR-----------SERPEHIT-------RMENDEKMTVIGTSSSNSQGVSICADGGDDHEDSSEIV---------------------------SAKSPEKPRKRVRFVVP-ESPRIDNXXXXXXXXXXXXXXSGMAFILGHSYVRAKKGSNLMKRIV 598
            IHTEL SGIPAIFSHFVTNL AFHQV++FLCIK+VP+PHVSP ERFLVGR+GPK YR+YRCI RYGY D+HKDD EFEK+L CS+AEFIR           S +P+++          E +E+M+VI + S          DGG     S + V                                  PRKRVRFV+P  SPR D   REEL+ELM+ARE+GMAFILGHSYV+AK GS+  +R+V
Sbjct:  568 IHTELDSGIPAIFSHFVTNLPAFHQVLIFLCIKNVPIPHVSPEERFLVGRIGPKEYRIYRCIVRYGYHDVHKDDQEFEKELVCSVAEFIRSGAAAAADAAASSKPKNVCGGGAEESEKEEEERMSVIPSGSIRMME----EDGGAGAPSSEDTVGGSGSGSGRGSSRGGGGAREIMSPSPSPPPVVVAPRKRVRFVLPAASPRPDAGVREELQELMDAREAGMAFILGHSYVKAKSGSSFFRRLV 808
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0018408 vs. ExPASy Swiss-Prot
Match: HAK24_ORYSJ (Potassium transporter 24 OS=Oryza sativa subsp. japonica GN=HAK24 PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.088e-56
Identity = 120/213 (56.34%), Postives = 145/213 (68.08%), Query Frame = 2 
Query:    2 IHTELVSGIPAIFSHFVTNLLAFHQVVVFLCIKSVPVPHVSPGERFLVGRVGPKGYRLYRCIARYGYRDIHKDDIEFEKDLACSIAEFIRSERPEHITRMENDEKMTVIGTSSSNSQGVSICADG-----------GDDHEDSS---EIVSAKSPEKPRKRVRFVVPESPRIDNXXXXXXXXXXXXXXSGMAFILGHSYVRAKKGSNLMKRIV 598
            IHTEL+SGIPAIFSHFVTNL AFHQV+VFLCIKSV VPHV P ERFLVGR+GPK YR+YR I RYGYRD+ KDD+EFEKDL  SIAEFIR       + M+          +S + +G+S  + G           G D   SS   EI    +  KP KRVRF +P+  +ID E R EL+ELMEARE+GM+FI G S+++AK GS L+K+IV
Sbjct:  535 IHTELMSGIPAIFSHFVTNLPAFHQVLVFLCIKSVSVPHVQPEERFLVGRIGPKKYRIYRVIVRYGYRDVQKDDVEFEKDLVSSIAEFIRCADSNQNSFMDG---------ASHSCEGLSFISKGLPLEEEEGEFDGSDSTGSSAHKEINPNTTAPKP-KRVRFALPKDTKIDREVRGELQELMEAREAGMSFITGRSHMKAKSGSGLIKQIV 737
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0018408 vs. ExPASy Swiss-Prot
Match: HAK7_ORYSJ (Potassium transporter 7 OS=Oryza sativa subsp. japonica GN=HAK7 PE=2 SV=3)

HSP 1 Score: 179.104 bits (453), Expect = 1.167e-50
Identity = 98/214 (45.79%), Postives = 141/214 (65.89%), Query Frame = 2 
Query:    2 IHTELVSGIPAIFSHFVTNLLAFHQVVVFLCIKSVPVPHVSPGERFLVGRVGPKGYRLYRCIARYGYRDIHKDDIEFEKDLACSIAEFIRSERPE---HITRMENDEKMTVIGTSSSNSQGVSICADGGDDHEDSSEIVSAKSPE---------------KPRKRVRFVVPESPRIDNXXXXXXXXXXXXXXSGMAFILGHSYVRAKKGSNLMK 589
            I+TELV+G+P+IFSHFVTNL AFHQV+VF+C+KSVPVP V   ER+L+GR+GP+ YR+YRCI RYGY+D+ KDD  FE  L  SIA+FI+ E  E     +   ++ +M VI T  +   G+ +  D  ++   +S   S++S                   R+RVRF + E  RID + R+EL +L++A+E+G+ +I+GHSYV+A+K SN +K
Sbjct:  561 IYTELVTGVPSIFSHFVTNLPAFHQVLVFVCVKSVPVPFVPEDERYLIGRIGPREYRMYRCIVRYGYKDVQKDDENFENHLVMSIAKFIQMEAEEAASSGSYESSEGRMAVIHTEDTTGTGL-VMRDSNNEASGTSLTRSSRSETLRSLQSIYEQESGSLSRRRRVRFEIAEEERIDPQVRDELADLLDAKEAGVTYIIGHSYVKARKNSNFLK 773
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0018408 vs. ExPASy Swiss-Prot
Match: HAK2_ORYSJ (Probable potassium transporter 2 OS=Oryza sativa subsp. japonica GN=HAK2 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 1.964e-50
Identity = 95/216 (43.98%), Postives = 138/216 (63.89%), Query Frame = 2 
Query:    2 IHTELVSGIPAIFSHFVTNLLAFHQVVVFLCIKSVPVPHVSPGERFLVGRVGPKGYRLYRCIARYGYRDIHKDDIEFEKDLACSIAEFIRSERPEHITRME----NDEKMTVIGTSSSNSQGVSICADGGDDHEDSSEIVSAKSP-----------EKP----RKRVRFVVPESPRIDNXXXXXXXXXXXXXXSGMAFILGHSYVRAKKGSNLMKR 592
            I+TELV+G+P IF+HF TNL AFH+V+VFLC+KSVPVP+VSP ER+LVGR+GP+ YR+YRCI RYGY+D+ +DD  FE  L  +I +FI  E  +  +       N+ +M VI TS      +++     +D  DS  + S KS            E P    R+RVRF +PE   +D + ++EL  L+EA+ +G+ +++GH Y++A+K S+  KR
Sbjct:  533 IYTELVTGVPNIFTHFTTNLPAFHEVLVFLCVKSVPVPYVSPDERYLVGRIGPRAYRMYRCIVRYGYKDVQRDDDNFENMLVMNIGKFIMMEAEDASSSASYDTANEGRMAVITTSDDYDSPLAV--RDSNDLADSMTMRSTKSESLRSLQSSYEQESPNVSRRRRVRFELPEEDDMDQQVKDELLALVEAKHTGVTYVMGHVYIKARKNSSFFKR 746
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0018408 vs. ExPASy Swiss-Prot
Match: HAK9_ORYSJ (Probable potassium transporter 9 OS=Oryza sativa subsp. japonica GN=HAK9 PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.543e-49
Identity = 106/224 (47.32%), Postives = 141/224 (62.95%), Query Frame = 2 
Query:    2 IHTELVSGIPAIFSHFVTNLLAFHQVVVFLCIKSVPVPHVSPGERFLVGRVGPKGYRLYRCIARYGYRDIHKDDIEFEKDLACSIAEFIRSERPEHIT-------------RMENDEKMTVIGTSSSNSQGVSICADGGDDHEDSSEIVSAKSP----EKP--------RKRVRFVV-PESPRIDNXXXXXXXXXXXXXXSGMAFILGHSYVRAKKGSNLMKRI 595
            ++T+L SG+PA FS FVTNL AFH+V+VF+C+KSVPVPHV P ER+LVGRVGP G+R YRCI RYGYRD+H+D   FE +L  S+A FI+ +   H               R E +  +TVIGT+      +  C      H+  S + +A+SP    E P         K+VRFVV   SP ++    EEL+EL EARE+G AFILGHS+V+ K GS+L+K++
Sbjct:  534 VYTDLTSGVPANFSRFVTNLPAFHRVLVFVCVKSVPVPHVLPAERYLVGRVGPAGHRSYRCIVRYGYRDVHQDVDSFEAELVESLATFIKLDALYHRCSDAGSGSEQLDDGRYERENALTVIGTNP-----LRRCLSYEASHDGVSSVDAARSPNGIVEVPAAAAAAPVTKKVRFVVEAASPEVEKGVVEELQELCEAREAGTAFILGHSHVQTKPGSSLLKKL 752
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0018408 vs. ExPASy Swiss-Prot
Match: POT2_ARATH (Potassium transporter 2 OS=Arabidopsis thaliana GN=POT2 PE=1 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 1.974e-43
Identity = 103/227 (45.37%), Postives = 140/227 (61.67%), Query Frame = 2 
Query:    2 IHTELVSGIPAIFSHFVTNLLAFHQVVVFLCIKSVPVPHVSPGERFLVGRVGPKGYRLYRCIARYGYRDIHKDDIEFEKDLACSIAEFIRSERPEHITRMENDE-------------KMTVIGTSSS------NSQGVSICADGGDDHEDSSEIVSAKSPEKPRKRVRFVVPE----------SPRIDNXXXXXXXXXXXXXXSGMAFILGHSYVRAKKGSNLMKRI 595
            + T+L SGIPA FS FVTNL AFH+V+VF+C+KSVPVP V P ER+LVGRVGP  +R YRCI RYGYRD+H+D   FE +L   +A+FIR +  +  T+ E+D              ++ VIGT +         + VSI     +  ED  ++ +  +P    +RVRF V E          S   D E R ELR+L+ A+E+G AFILGHS+V+AK+GS++MKR+
Sbjct:  534 VFTDLTSGIPANFSRFVTNLPAFHRVLVFVCVKSVPVPFVPPAERYLVGRVGPVDHRSYRCIVRYGYRDVHQDVDSFETELVSKLADFIRYDWHKR-TQQEDDNARSVQSNESSSESRLAVIGTVAYEIEDNLQPESVSIGFSTVESMEDVIQM-AEPAPTATIRRVRFAVEENSYEDEGSTSSAEADAELRSELRDLLAAQEAGTAFILGHSHVKAKQGSSVMKRL 758
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0018408 vs. ExPASy Swiss-Prot
Match: HAK8_ORYSJ (Putative potassium transporter 8 OS=Oryza sativa subsp. japonica GN=HAK8 PE=3 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 1.968e-42
Identity = 97/237 (40.93%), Postives = 133/237 (56.12%), Query Frame = 2 
Query:    2 IHTELVSGIPAIFSHFVTNLLAFHQVVVFLCIKSVPVPHVSPGERFLVGRVGPKGYRLYRCIARYGYRDIHKDDIEFEKDLACSIAEFIRSERP-----------EHITRMENDEKMTVIGTSSSNSQGVSICADGGDDHEDSSEIVSAKSPEKPR---------------------KRVRFVV------PESPRIDNXXXXXXXXXXXXXX-SGMAFILGHSYVRAKKGSNLMKRI 595
            ++T+L SG+PA FS FVTNL AFHQV+VF+C+KSVPVP+V P ER+L+GRVGP G+R YRCI RYGYRD+H+D   FE +L  S+A FI+ +             +H    E   ++ VIG+S ++            D +DS +  SA S E                        K+VRF +      PE+   DN+   E  E + A   +G AFILGHS+V+ K GS+L+KR+
Sbjct:  534 VYTDLTSGVPANFSRFVTNLPAFHQVLVFVCVKSVPVPYVFPAERYLIGRVGPPGHRSYRCIVRYGYRDVHQDVDSFETELVESLATFIKLDASYRCSDASGGGGDHEPEEERGTRLAVIGSSHASY-----------DIQDSVQHSSAASVETTTTRRRSGGGDDDGSPGGGGGRAKQVRFFIDSHVASPEAA--DNKQVAEELEALAAARDAGTAFILGHSHVQCKPGSSLLKRL 757
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0018408 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0D2V2B9_GOSRA2.809e-8977.40Potassium transporter OS=Gossypium raimondii GN=B4... [more]
A0A0D2VW07_GOSRA3.112e-8977.40Potassium transporter OS=Gossypium raimondii GN=B4... [more]
A0A072U5F4_MEDTR2.376e-8871.22Potassium transporter OS=Medicago truncatula GN=MT... [more]
A0A059AGA0_EUCGR2.690e-8874.51Potassium transporter OS=Eucalyptus grandis GN=EUG... [more]
A0A067LKY5_JATCU1.747e-8572.55Potassium transporter OS=Jatropha curcas GN=JCGZ_0... [more]
A0A0A0LFF8_CUCSA1.648e-8472.28Potassium transporter OS=Cucumis sativus GN=Csa_3G... [more]
M0ZIA8_SOLTU2.067e-8468.47Uncharacterized protein OS=Solanum tuberosum GN=PG... [more]
M0ZIA7_SOLTU2.632e-8368.47Uncharacterized protein OS=Solanum tuberosum GN=PG... [more]
W0TR99_ACAMN3.004e-8371.57Potassium transporter OS=Acacia mangium PE=2 SV=1[more]
V7B7T1_PHAVU8.255e-8371.01Potassium transporter OS=Phaseolus vulgaris GN=PHA... [more]

Pages

back to top
BLAST of g.arboreum_cottongen_reftransV1_0018408 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
POT8_ARATH9.887e-7967.48Potassium transporter 8 OS=Arabidopsis thaliana GN... [more]
POT6_ARATH4.640e-6456.36Potassium transporter 6 OS=Arabidopsis thaliana GN... [more]
HAK25_ORYSJ2.849e-6359.71Potassium transporter 25 OS=Oryza sativa subsp. ja... [more]
HAK10_ORYSJ1.221e-5651.43Potassium transporter 10 OS=Oryza sativa subsp. ja... [more]
HAK24_ORYSJ3.088e-5656.34Potassium transporter 24 OS=Oryza sativa subsp. ja... [more]
HAK7_ORYSJ1.167e-5045.79Potassium transporter 7 OS=Oryza sativa subsp. jap... [more]
HAK2_ORYSJ1.964e-5043.98Probable potassium transporter 2 OS=Oryza sativa s... [more]
HAK9_ORYSJ4.543e-4947.32Probable potassium transporter 9 OS=Oryza sativa s... [more]
POT2_ARATH1.974e-4345.37Potassium transporter 2 OS=Arabidopsis thaliana GN... [more]
HAK8_ORYSJ1.968e-4240.93Putative potassium transporter 8 OS=Oryza sativa s... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR30540:SF18POTASSIUM TRANSPORTER 8coord: 1..100
NoneNo IPR availablePANTHERPTHR30540OSMOTIC STRESS POTASSIUM TRANSPORTERcoord: 1..100

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0018408 ID=g.arboreum_cottongen_reftransV1_0018408; Name=g.arboreum_cottongen_reftransV1_0018408; organism=Gossypium arboreum; type=contig; length=599bp
TATACATACTGAGCTTGTTTCCGGGATCCCGGCTATTTTTTCTCACTTTG
TCACCAACCTTCTAGCTTTCCACCAAGTAGTTGTGTTTCTTTGCATCAAA
TCAGTTCCAGTGCCCCATGTTAGTCCCGGGGAACGGTTCCTAGTCGGAAG
AGTTGGTCCAAAAGGGTATAGGCTTTATCGGTGTATTGCACGGTATGGAT
ATCGAGATATTCACAAAGATGATATTGAATTCGAGAAAGACCTCGCTTGC
AGCATTGCGGAATTCATCCGGTCAGAACGGCCCGAACATATTACCAGAAT
GGAGAACGATGAGAAAATGACAGTTATTGGGACATCATCATCGAATTCAC
AAGGTGTGTCAATTTGTGCAGATGGTGGTGATGATCATGAAGATTCATCC
GAAATAGTAAGCGCAAAGTCCCCCGAGAAGCCAAGGAAGAGGGTGAGGTT
TGTGGTCCCAGAAAGTCCCCGGATCGACAATGAGGCGAGAGAGGAATTGC
GGGAACTGATGGAAGCTAGGGAATCAGGCATGGCATTCATATTGGGGCAT
TCATATGTAAGAGCAAAGAAAGGATCAAATTTGATGAAGAGAATAGTGA
back to top