g.arboreum_cottongen_reftransV1_0000804, g.arboreum_cottongen_reftransV1_0000804 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0000804 vs. ExPASy TrEMBL
Match: I1JNN1_SOYBN (Kinesin-like protein OS=Glycine max PE=3 SV=2) HSP 1 Score: 384.03 bits (985), Expect = 5.116e-121 Identity = 226/344 (65.70%), Postives = 270/344 (78.49%), Query Frame = 2 Query: 2 EQQKILSGEVALHSSTLKRLSEEAARNPQNEQIHDKMKRISDEIRGKNERIALLEKQIADSIMVSSNMEKSEISQSTVAELVAQLNEKSFELEVKAADNRIIQEQLNRKICECEGLQETVASLKQQLSDALESPNVHSKASYSQQIK-----MNGLQMDKEVAAPKEISRDLLIKTQVTEIEELKHKVVGLTESKDQLESQNHKLAEESSYAKGLASAAAVELKELSEEVAKLMNKNERLMAELAAAKNPPTQRRTS-TVRNGRRES--LTKQHDQVGSSSYLKRELAMSKXXXXXXXXXXXXKDQREAELQRKVEESKQREAYLENELANMWVLVAKLKKSNG 1009 EQ KILSGEVALHSS LKRLS+EA RNPQN I +MK++ DEI K+E+I LLEKQI++S + S E S Q TVAEL+AQLNEKSFELEVKAADNR+IQEQLN+KICECE QET+ASLKQQL+DAL+ N ++SQ L +DK + + ++ Q++EIE+LK +V LTESK+QLE +N KLAEESSYAKGLASAAAVELK LSEEVAK MN+NERL AELAA+KN P +RRTS TV+NGRRES +++DQ S++ +KRELA+SKEREL YEA+LLEKD++EAELQRK+EESK+REAYLENELANMWVLVAKLKKS G Sbjct: 648 EQHKILSGEVALHSSALKRLSDEATRNPQNGHIDVEMKKLKDEITAKSEQIDLLEKQISNSFIASDKTEHSGALQ-TVAELMAQLNEKSFELEVKAADNRVIQEQLNQKICECESQQETIASLKQQLADALDLRNFSHVVNHSQNFSGTKDYCGELHLDKGNVTINNSNEGIQLQAQISEIEDLKQRVAELTESKEQLEFRNQKLAEESSYAKGLASAAAVELKALSEEVAKFMNQNERLAAELAASKNSPAERRTSGTVQNGRRESHARVRRNDQGASNANIKRELALSKERELSYEASLLEKDEKEAELQRKIEESKKREAYLENELANMWVLVAKLKKSQG 990
BLAST of g.arboreum_cottongen_reftransV1_0000804 vs. ExPASy TrEMBL
Match: V7CZL7_PHAVU (Kinesin-like protein OS=Phaseolus vulgaris GN=PHAVU_001G144600g PE=3 SV=1) HSP 1 Score: 380.948 bits (977), Expect = 9.353e-120 Identity = 230/344 (66.86%), Postives = 272/344 (79.07%), Query Frame = 2 Query: 2 EQQKILSGEVALHSSTLKRLSEEAARNPQNEQIHDKMKRISDEIRGKNERIALLEKQIADSIMVSSNMEKSEISQSTVAELVAQLNEKSFELEVKAADNRIIQEQLNRKICECEGLQETVASLKQQLSDALE----SPNVHSKASYSQQIKMNG-LQMDKEVAAPKEISRDLLIKTQVTEIEELKHKVVGLTESKDQLESQNHKLAEESSYAKGLASAAAVELKELSEEVAKLMNKNERLMAELAAAKNPPTQRRTS-TVRNGRRES--LTKQHDQVGSSSYLKRELAMSKXXXXXXXXXXXXKDQREAELQRKVEESKQREAYLENELANMWVLVAKLKKSNG 1009 E KILSGEVALHSS LKRLS+EA RNPQN QIH +M+ + DEI K+E+I LLEKQI++S + S E+S Q TVA+L+AQLNEKSFELEVKAADNRIIQEQLN+KICECE QET+ASLKQQL+DALE SP V+ ++S G + +DK + + ++ Q +EIEELK K+ LTE K+QLE +N KLAEESSYAKGLASAAAVELK LSEEVAKLMN+NERL AEL A+KN T+RRTS TV+NGRRES +++DQ GS++ +KRELA+SKEREL YEAALLEKD +EAELQRK+EESKQ+EAYLENELANMWVLVAKLKKS G Sbjct: 651 EHHKILSGEVALHSSALKRLSDEATRNPQNGQIHVEMENLKDEITAKSEQIDLLEKQISNSFIASDKTEQSGALQ-TVADLMAQLNEKSFELEVKAADNRIIQEQLNQKICECESQQETIASLKQQLADALEMRNFSPVVNHSQNFSVTKDYRGEIHLDKGNMINNS-NEGIHLQAQTSEIEELKQKLAELTELKEQLEFRNQKLAEESSYAKGLASAAAVELKALSEEVAKLMNQNERLAAELGASKNSTTERRTSGTVQNGRRESHVRVRRNDQGGSNTNIKRELALSKERELSYEAALLEKDHKEAELQRKIEESKQKEAYLENELANMWVLVAKLKKSQG 992
BLAST of g.arboreum_cottongen_reftransV1_0000804 vs. ExPASy TrEMBL
Match: K7LD38_SOYBN (Kinesin-like protein OS=Glycine max PE=3 SV=1) HSP 1 Score: 375.17 bits (962), Expect = 1.047e-119 Identity = 222/340 (65.29%), Postives = 267/340 (78.53%), Query Frame = 2 Query: 2 EQQKILSGEVALHSSTLKRLSEEAARNPQNEQIHDKMKRISDEIRGKNERIALLEKQIADSIMVSSNMEKSEISQSTVAELVAQLNEKSFELEVKAADNRIIQEQLNRKICECEGLQETVASLKQQLSDALESPNVHSKASYSQQIKMNG-LQMDKEVAAPKEISRDLLIKTQVTEIEELKHKVVGLTESKDQLESQNHKLAEESSYAKGLASAAAVELKELSEEVAKLMNKNERLMAELAAAKNPPTQRRTS---TVRNGRRESLTKQHDQVGSSSYLKRELAMSKXXXXXXXXXXXXKDQREAELQRKVEESKQREAYLENELANMWVLVAKLKKSNG 1009 EQQ+ILSGEVALHSS LKRLS+EAARNPQ +QIH +M+R+ DEI+ K E+I LLE++IADS +V + +++S +S S + EL+ QLNEKSFELEVK ADN IIQ+QL++KI ECE LQET+ SLK QL+DALE N+ S +S +G DKE A + +L++ Q EIE + K+ LTESK+QLE N KLAEESSYAKGLASAAAVELK LSEEV+KLMN+NERL AELAA+KN P Q R S TVRNGRRES +++DQ GS+S +KRELA+SKEREL YE+ALL+ D REAELQRK+EESKQRE YLENELANMWVLVAKLKKS G Sbjct: 443 EQQEILSGEVALHSSALKRLSQEAARNPQKDQIHVEMERLKDEIKAKKEQIDLLERKIADSFIVKNKLDESGVSLS-LTELMTQLNEKSFELEVKTADNHIIQQQLSQKIHECESLQETIGSLKHQLADALELRNL-SPQPFSVTKDYHGEPHHDKESAMITNTNEKILLQEQAGEIEGMNQKLAELTESKEQLELLNQKLAEESSYAKGLASAAAVELKALSEEVSKLMNQNERLSAELAASKNSPAQCRNSGPGTVRNGRRESHVRRNDQGGSNSDIKRELALSKERELSYESALLDWDHREAELQRKIEESKQRETYLENELANMWVLVAKLKKSQG 780
BLAST of g.arboreum_cottongen_reftransV1_0000804 vs. ExPASy TrEMBL
Match: G7KWB5_MEDTR (Kinesin-like protein OS=Medicago truncatula GN=MTR_7g093720 PE=3 SV=2) HSP 1 Score: 378.252 bits (970), Expect = 7.546e-119 Identity = 229/344 (66.57%), Postives = 270/344 (78.49%), Query Frame = 2 Query: 2 EQQKILSGEVALHSSTLKRLSEEAARNPQNEQIHDKMKRISDEIRGKNERIALLEKQIADSIMVSSNMEKSEISQSTVAELVAQLNEKSFELEVKAADNRIIQEQLNRKICECEGLQETVASLKQQLSDALESPNVHSKASYSQQIKMNGLQMDKEVAAPKEISRDL-----LIKTQVTEIEELKHKVVGLTESKDQLESQNHKLAEESSYAKGLASAAAVELKELSEEVAKLMNKNERLMAELAAAKNPPTQRRTS-TVRNGRRESLT--KQHDQVGSSSYLKRELAMSKXXXXXXXXXXXXKDQREAELQRKVEESKQREAYLENELANMWVLVAKLKKSNG 1009 EQ KILSGEVALHSS+LKRLS+E NPQN Q+ +MKR+ DEI+ K+E+I LLEKQ+++ + S ++S +SQ+ VAEL+ QLN+KSFELEVKAADNRIIQEQLN+KICECE LQETVASLKQQL+DA+E N ++SQ G + P + + D L++ Q +EIEELK KV LT SKDQLE +N KLAEESSYAKGLASAAAVELK LSEEVAKLMN NERL AELAA+KN PT RRTS T +NGRRES +++DQ S+S +KRELA+SK+REL YEAALLEKDQ+E ELQRK+EESKQREAYLENELANMWVLVAKLKKS G Sbjct: 649 EQHKILSGEVALHSSSLKRLSDETRTNPQNSQLQVEMKRLKDEIKEKSEQIDLLEKQMSNYFIASEQTDQSGVSQA-VAELMEQLNDKSFELEVKAADNRIIQEQLNQKICECESLQETVASLKQQLTDAIELRNFSPVVNHSQHFP--GTKDYHGELYPDKGNMDSTNEGNLMQAQASEIEELKQKVEELTASKDQLEVRNQKLAEESSYAKGLASAAAVELKALSEEVAKLMNHNERLSAELAASKNSPTPRRTSGTAQNGRRESQVRLRRNDQGVSNSDVKRELALSKDRELSYEAALLEKDQKEVELQRKIEESKQREAYLENELANMWVLVAKLKKSQG 989
BLAST of g.arboreum_cottongen_reftransV1_0000804 vs. ExPASy TrEMBL
Match: V7BKX9_PHAVU (Kinesin-like protein OS=Phaseolus vulgaris GN=PHAVU_007G261400g PE=3 SV=1) HSP 1 Score: 375.17 bits (962), Expect = 1.044e-117 Identity = 222/344 (64.53%), Postives = 263/344 (76.45%), Query Frame = 2 Query: 2 EQQKILSGEVALHSSTLKRLSEEAARNPQNEQIHDKMKRISDEIRGKNERIALLEKQIADSIMVSSNMEKSEISQSTVAELVAQLNEKSFELEVKAADNRIIQEQLNRKICECEGLQETVASLKQQLSDALESPNVHSKASYSQQIKMNGLQMD-----KEVAAPKEISRDLLIKTQVTEIEELKHKVVGLTESKDQLESQNHKLAEESSYAKGLASAAAVELKELSEEVAKLMNKNERLMAELAAAKNPPTQRR---TSTVRNGRRESLTKQHDQVGSSSYLKRELAMSKXXXXXXXXXXXXKDQREAELQRKVEESKQREAYLENELANMWVLVAKLKKSNG 1009 EQQKILS EV+LHSSTLKRLS EAARNPQ +QIH +M+R+ DEI+ K E+I L+KQIADS + S+ +++S +AEL+ QLNEKSFELEVK ADN IIQEQL++KI ECE LQETV SLKQQL+DALE N+ +SQ + D KE A +L++ Q EIEELKHK+ LTES++QLE +N KLAEESSYAKGLASAAAVELK LSEEVAKLMN+NERL+ E A KN P QRR T TVRNGRRES +++DQ G +S +KRELA+SKEREL YE+ALL++D +E ELQR +EESKQREAYLENELANMWVLVAKLKKS G Sbjct: 650 EQQKILSEEVSLHSSTLKRLSLEAARNPQMDQIHVEMERLKDEIKAKKEQINFLQKQIADSFIASNKLDES----GNLAELLTQLNEKSFELEVKTADNHIIQEQLHQKIRECESLQETVCSLKQQLADALELSNLRPILDHSQHFSVTKDYHDESYLEKESAMMTNSDEKILLQQQANEIEELKHKLAELTESEEQLELRNQKLAEESSYAKGLASAAAVELKALSEEVAKLMNQNERLLNEQAVLKNSPAQRRSSGTGTVRNGRRESHVRRNDQGGLNSDIKRELALSKERELSYESALLDRDHKEVELQRTIEESKQREAYLENELANMWVLVAKLKKSQG 989 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0000804 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pages
BLAST of g.arboreum_cottongen_reftransV1_0000804 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 0
InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0000804 ID=g.arboreum_cottongen_reftransV1_0000804; Name=g.arboreum_cottongen_reftransV1_0000804; organism=Gossypium arboreum; type=contig; length=1010bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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