g.arboreum_cottongen_reftransV1_0000804, g.arboreum_cottongen_reftransV1_0000804 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0000804
Unique Nameg.arboreum_cottongen_reftransV1_0000804
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length1010
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr11chromosomeg.arboreum_cottongen_reftransV1_0000804:1..1010 .
Chr11:74955841..74957800 +
Homology
BLAST of g.arboreum_cottongen_reftransV1_0000804 vs. ExPASy TrEMBL
Match: I1JNN1_SOYBN (Kinesin-like protein OS=Glycine max PE=3 SV=2)

HSP 1 Score: 384.03 bits (985), Expect = 5.116e-121
Identity = 226/344 (65.70%), Postives = 270/344 (78.49%), Query Frame = 2
Query:    2 EQQKILSGEVALHSSTLKRLSEEAARNPQNEQIHDKMKRISDEIRGKNERIALLEKQIADSIMVSSNMEKSEISQSTVAELVAQLNEKSFELEVKAADNRIIQEQLNRKICECEGLQETVASLKQQLSDALESPNVHSKASYSQQIK-----MNGLQMDKEVAAPKEISRDLLIKTQVTEIEELKHKVVGLTESKDQLESQNHKLAEESSYAKGLASAAAVELKELSEEVAKLMNKNERLMAELAAAKNPPTQRRTS-TVRNGRRES--LTKQHDQVGSSSYLKRELAMSKXXXXXXXXXXXXKDQREAELQRKVEESKQREAYLENELANMWVLVAKLKKSNG 1009
            EQ KILSGEVALHSS LKRLS+EA RNPQN  I  +MK++ DEI  K+E+I LLEKQI++S + S   E S   Q TVAEL+AQLNEKSFELEVKAADNR+IQEQLN+KICECE  QET+ASLKQQL+DAL+  N     ++SQ           L +DK        +  + ++ Q++EIE+LK +V  LTESK+QLE +N KLAEESSYAKGLASAAAVELK LSEEVAK MN+NERL AELAA+KN P +RRTS TV+NGRRES    +++DQ  S++ +KRELA+SKEREL YEA+LLEKD++EAELQRK+EESK+REAYLENELANMWVLVAKLKKS G
Sbjct:  648 EQHKILSGEVALHSSALKRLSDEATRNPQNGHIDVEMKKLKDEITAKSEQIDLLEKQISNSFIASDKTEHSGALQ-TVAELMAQLNEKSFELEVKAADNRVIQEQLNQKICECESQQETIASLKQQLADALDLRNFSHVVNHSQNFSGTKDYCGELHLDKGNVTINNSNEGIQLQAQISEIEDLKQRVAELTESKEQLEFRNQKLAEESSYAKGLASAAAVELKALSEEVAKFMNQNERLAAELAASKNSPAERRTSGTVQNGRRESHARVRRNDQGASNANIKRELALSKERELSYEASLLEKDEKEAELQRKIEESKKREAYLENELANMWVLVAKLKKSQG 990          
BLAST of g.arboreum_cottongen_reftransV1_0000804 vs. ExPASy TrEMBL
Match: V7CZL7_PHAVU (Kinesin-like protein OS=Phaseolus vulgaris GN=PHAVU_001G144600g PE=3 SV=1)

HSP 1 Score: 380.948 bits (977), Expect = 9.353e-120
Identity = 230/344 (66.86%), Postives = 272/344 (79.07%), Query Frame = 2
Query:    2 EQQKILSGEVALHSSTLKRLSEEAARNPQNEQIHDKMKRISDEIRGKNERIALLEKQIADSIMVSSNMEKSEISQSTVAELVAQLNEKSFELEVKAADNRIIQEQLNRKICECEGLQETVASLKQQLSDALE----SPNVHSKASYSQQIKMNG-LQMDKEVAAPKEISRDLLIKTQVTEIEELKHKVVGLTESKDQLESQNHKLAEESSYAKGLASAAAVELKELSEEVAKLMNKNERLMAELAAAKNPPTQRRTS-TVRNGRRES--LTKQHDQVGSSSYLKRELAMSKXXXXXXXXXXXXKDQREAELQRKVEESKQREAYLENELANMWVLVAKLKKSNG 1009
            E  KILSGEVALHSS LKRLS+EA RNPQN QIH +M+ + DEI  K+E+I LLEKQI++S + S   E+S   Q TVA+L+AQLNEKSFELEVKAADNRIIQEQLN+KICECE  QET+ASLKQQL+DALE    SP V+   ++S      G + +DK        +  + ++ Q +EIEELK K+  LTE K+QLE +N KLAEESSYAKGLASAAAVELK LSEEVAKLMN+NERL AEL A+KN  T+RRTS TV+NGRRES    +++DQ GS++ +KRELA+SKEREL YEAALLEKD +EAELQRK+EESKQ+EAYLENELANMWVLVAKLKKS G
Sbjct:  651 EHHKILSGEVALHSSALKRLSDEATRNPQNGQIHVEMENLKDEITAKSEQIDLLEKQISNSFIASDKTEQSGALQ-TVADLMAQLNEKSFELEVKAADNRIIQEQLNQKICECESQQETIASLKQQLADALEMRNFSPVVNHSQNFSVTKDYRGEIHLDKGNMINNS-NEGIHLQAQTSEIEELKQKLAELTELKEQLEFRNQKLAEESSYAKGLASAAAVELKALSEEVAKLMNQNERLAAELGASKNSTTERRTSGTVQNGRRESHVRVRRNDQGGSNTNIKRELALSKERELSYEAALLEKDHKEAELQRKIEESKQKEAYLENELANMWVLVAKLKKSQG 992          
BLAST of g.arboreum_cottongen_reftransV1_0000804 vs. ExPASy TrEMBL
Match: K7LD38_SOYBN (Kinesin-like protein OS=Glycine max PE=3 SV=1)

HSP 1 Score: 375.17 bits (962), Expect = 1.047e-119
Identity = 222/340 (65.29%), Postives = 267/340 (78.53%), Query Frame = 2
Query:    2 EQQKILSGEVALHSSTLKRLSEEAARNPQNEQIHDKMKRISDEIRGKNERIALLEKQIADSIMVSSNMEKSEISQSTVAELVAQLNEKSFELEVKAADNRIIQEQLNRKICECEGLQETVASLKQQLSDALESPNVHSKASYSQQIKMNG-LQMDKEVAAPKEISRDLLIKTQVTEIEELKHKVVGLTESKDQLESQNHKLAEESSYAKGLASAAAVELKELSEEVAKLMNKNERLMAELAAAKNPPTQRRTS---TVRNGRRESLTKQHDQVGSSSYLKRELAMSKXXXXXXXXXXXXKDQREAELQRKVEESKQREAYLENELANMWVLVAKLKKSNG 1009
            EQQ+ILSGEVALHSS LKRLS+EAARNPQ +QIH +M+R+ DEI+ K E+I LLE++IADS +V + +++S +S S + EL+ QLNEKSFELEVK ADN IIQ+QL++KI ECE LQET+ SLK QL+DALE  N+ S   +S     +G    DKE A     +  +L++ Q  EIE +  K+  LTESK+QLE  N KLAEESSYAKGLASAAAVELK LSEEV+KLMN+NERL AELAA+KN P Q R S   TVRNGRRES  +++DQ GS+S +KRELA+SKEREL YE+ALL+ D REAELQRK+EESKQRE YLENELANMWVLVAKLKKS G
Sbjct:  443 EQQEILSGEVALHSSALKRLSQEAARNPQKDQIHVEMERLKDEIKAKKEQIDLLERKIADSFIVKNKLDESGVSLS-LTELMTQLNEKSFELEVKTADNHIIQQQLSQKIHECESLQETIGSLKHQLADALELRNL-SPQPFSVTKDYHGEPHHDKESAMITNTNEKILLQEQAGEIEGMNQKLAELTESKEQLELLNQKLAEESSYAKGLASAAAVELKALSEEVSKLMNQNERLSAELAASKNSPAQCRNSGPGTVRNGRRESHVRRNDQGGSNSDIKRELALSKERELSYESALLDWDHREAELQRKIEESKQRETYLENELANMWVLVAKLKKSQG 780          
BLAST of g.arboreum_cottongen_reftransV1_0000804 vs. ExPASy TrEMBL
Match: G7KWB5_MEDTR (Kinesin-like protein OS=Medicago truncatula GN=MTR_7g093720 PE=3 SV=2)

HSP 1 Score: 378.252 bits (970), Expect = 7.546e-119
Identity = 229/344 (66.57%), Postives = 270/344 (78.49%), Query Frame = 2
Query:    2 EQQKILSGEVALHSSTLKRLSEEAARNPQNEQIHDKMKRISDEIRGKNERIALLEKQIADSIMVSSNMEKSEISQSTVAELVAQLNEKSFELEVKAADNRIIQEQLNRKICECEGLQETVASLKQQLSDALESPNVHSKASYSQQIKMNGLQMDKEVAAPKEISRDL-----LIKTQVTEIEELKHKVVGLTESKDQLESQNHKLAEESSYAKGLASAAAVELKELSEEVAKLMNKNERLMAELAAAKNPPTQRRTS-TVRNGRRESLT--KQHDQVGSSSYLKRELAMSKXXXXXXXXXXXXKDQREAELQRKVEESKQREAYLENELANMWVLVAKLKKSNG 1009
            EQ KILSGEVALHSS+LKRLS+E   NPQN Q+  +MKR+ DEI+ K+E+I LLEKQ+++  + S   ++S +SQ+ VAEL+ QLN+KSFELEVKAADNRIIQEQLN+KICECE LQETVASLKQQL+DA+E  N     ++SQ     G +       P + + D      L++ Q +EIEELK KV  LT SKDQLE +N KLAEESSYAKGLASAAAVELK LSEEVAKLMN NERL AELAA+KN PT RRTS T +NGRRES    +++DQ  S+S +KRELA+SK+REL YEAALLEKDQ+E ELQRK+EESKQREAYLENELANMWVLVAKLKKS G
Sbjct:  649 EQHKILSGEVALHSSSLKRLSDETRTNPQNSQLQVEMKRLKDEIKEKSEQIDLLEKQMSNYFIASEQTDQSGVSQA-VAELMEQLNDKSFELEVKAADNRIIQEQLNQKICECESLQETVASLKQQLTDAIELRNFSPVVNHSQHFP--GTKDYHGELYPDKGNMDSTNEGNLMQAQASEIEELKQKVEELTASKDQLEVRNQKLAEESSYAKGLASAAAVELKALSEEVAKLMNHNERLSAELAASKNSPTPRRTSGTAQNGRRESQVRLRRNDQGVSNSDVKRELALSKDRELSYEAALLEKDQKEVELQRKIEESKQREAYLENELANMWVLVAKLKKSQG 989          
BLAST of g.arboreum_cottongen_reftransV1_0000804 vs. ExPASy TrEMBL
Match: V7BKX9_PHAVU (Kinesin-like protein OS=Phaseolus vulgaris GN=PHAVU_007G261400g PE=3 SV=1)

HSP 1 Score: 375.17 bits (962), Expect = 1.044e-117
Identity = 222/344 (64.53%), Postives = 263/344 (76.45%), Query Frame = 2
Query:    2 EQQKILSGEVALHSSTLKRLSEEAARNPQNEQIHDKMKRISDEIRGKNERIALLEKQIADSIMVSSNMEKSEISQSTVAELVAQLNEKSFELEVKAADNRIIQEQLNRKICECEGLQETVASLKQQLSDALESPNVHSKASYSQQIKMNGLQMD-----KEVAAPKEISRDLLIKTQVTEIEELKHKVVGLTESKDQLESQNHKLAEESSYAKGLASAAAVELKELSEEVAKLMNKNERLMAELAAAKNPPTQRR---TSTVRNGRRESLTKQHDQVGSSSYLKRELAMSKXXXXXXXXXXXXKDQREAELQRKVEESKQREAYLENELANMWVLVAKLKKSNG 1009
            EQQKILS EV+LHSSTLKRLS EAARNPQ +QIH +M+R+ DEI+ K E+I  L+KQIADS + S+ +++S      +AEL+ QLNEKSFELEVK ADN IIQEQL++KI ECE LQETV SLKQQL+DALE  N+     +SQ   +     D     KE A        +L++ Q  EIEELKHK+  LTES++QLE +N KLAEESSYAKGLASAAAVELK LSEEVAKLMN+NERL+ E A  KN P QRR   T TVRNGRRES  +++DQ G +S +KRELA+SKEREL YE+ALL++D +E ELQR +EESKQREAYLENELANMWVLVAKLKKS G
Sbjct:  650 EQQKILSEEVSLHSSTLKRLSLEAARNPQMDQIHVEMERLKDEIKAKKEQINFLQKQIADSFIASNKLDES----GNLAELLTQLNEKSFELEVKTADNHIIQEQLHQKIRECESLQETVCSLKQQLADALELSNLRPILDHSQHFSVTKDYHDESYLEKESAMMTNSDEKILLQQQANEIEELKHKLAELTESEEQLELRNQKLAEESSYAKGLASAAAVELKALSEEVAKLMNQNERLLNEQAVLKNSPAQRRSSGTGTVRNGRRESHVRRNDQGGLNSDIKRELALSKERELSYESALLDRDHKEVELQRTIEESKQREAYLENELANMWVLVAKLKKSQG 989          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0000804 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
I1JNN1_SOYBN5.116e-12165.70Kinesin-like protein OS=Glycine max PE=3 SV=2[more]
V7CZL7_PHAVU9.353e-12066.86Kinesin-like protein OS=Phaseolus vulgaris GN=PHAV... [more]
K7LD38_SOYBN1.047e-11965.29Kinesin-like protein OS=Glycine max PE=3 SV=1[more]
G7KWB5_MEDTR7.546e-11966.57Kinesin-like protein OS=Medicago truncatula GN=MTR... [more]
V7BKX9_PHAVU1.044e-11764.53Kinesin-like protein OS=Phaseolus vulgaris GN=PHAV... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0000804 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 32..52
NoneNo IPR availableCOILSCoilCoilcoord: 101..128
NoneNo IPR availableCOILSCoilCoilcoord: 206..233
NoneNo IPR availableCOILSCoilCoilcoord: 171..198
NoneNo IPR availableCOILSCoilCoilcoord: 284..315
NoneNo IPR availablePANTHERPTHR24115:SF70KINESIN-RELATED PROTEIN 11coord: 1..331
IPR027640Kinesin-like proteinPANTHERPTHR24115FAMILY NOT NAMEDcoord: 1..331

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0000804 ID=g.arboreum_cottongen_reftransV1_0000804; Name=g.arboreum_cottongen_reftransV1_0000804; organism=Gossypium arboreum; type=contig; length=1010bp
GGAGCAGCAGAAGATTTTGTCTGGAGAGGTAGCACTTCATTCAAGCACTT
TAAAACGATTGTCTGAGGAGGCTGCAAGAAACCCCCAGAATGAACAGATT
CATGACAAGATGAAAAGGATAAGTGATGAAATCAGGGGAAAGAATGAACG
AATTGCTTTGCTAGAAAAGCAAATTGCTGATTCCATCATGGTTTCAAGCA
ATATGGAGAAATCAGAAATATCACAATCTACTGTTGCTGAATTGGTGGCG
CAATTAAATGAGAAATCCTTTGAACTTGAGGTTAAAGCTGCTGACAATCG
GATAATTCAAGAACAGCTTAACCGGAAGATTTGTGAATGCGAAGGATTGC
AAGAAACAGTTGCATCCTTAAAGCAGCAGCTATCTGATGCACTAGAATCA
CCCAATGTCCATTCTAAAGCCTCCTATTCCCAACAAATCAAAATGAATGG
CCTGCAGATGGACAAAGAAGTTGCGGCACCAAAAGAGATTAGTAGAGATT
TGCTTATAAAAACACAGGTGACCGAGATTGAGGAACTGAAGCACAAAGTT
GTGGGACTAACTGAGTCAAAAGACCAGCTAGAGTCGCAGAACCATAAACT
GGCAGAGGAGAGTTCATATGCCAAGGGGCTAGCCTCAGCCGCTGCTGTGG
AGCTTAAGGAATTGTCAGAAGAAGTTGCTAAACTAATGAATAAAAACGAG
AGACTAATGGCAGAACTCGCTGCAGCAAAGAATCCTCCCACACAACGTCG
AACAAGTACAGTACGGAATGGTCGAAGAGAGAGTCTGACCAAACAACATG
ACCAAGTTGGATCATCCTCTTATTTAAAGAGAGAACTGGCGATGAGCAAA
GAGAGAGAACTTTTGTATGAAGCTGCTCTTCTAGAGAAGGATCAACGTGA
AGCTGAGCTACAAAGAAAGGTTGAAGAATCAAAGCAAAGAGAAGCTTATC
TAGAAAATGAACTTGCAAATATGTGGGTTCTTGTTGCCAAATTAAAAAAA
TCCAATGGAG
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR027640Kinesin-like_fam
Vocabulary: Molecular Function
TermDefinition
GO:0003777microtubule motor activity
Vocabulary: Biological Process
TermDefinition
GO:0007018microtubule-based movement