g.arboreum_cottongen_reftransV1_0009137, g.arboreum_cottongen_reftransV1_0009137 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0009137
Unique Nameg.arboreum_cottongen_reftransV1_0009137
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length413
Homology
BLAST of g.arboreum_cottongen_reftransV1_0009137 vs. ExPASy TrEMBL
Match: A0A059DB74_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03919 PE=4 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 2.810e-70
Identity = 108/137 (78.83%), Postives = 120/137 (87.59%), Query Frame = 2
Query:    2 NSEISPSQFEAHAGWPSRRKPFQNIYTSNGVSLHELSISLSKNRKFSTYENDDLCSICLDGGNLLCCDTCPRAFHLECISLPRIPIGTWHCRYCQNTFQKEKFVERNANALAAGRVAGIDPIEQITKRSIRIIKTPE 412
            +S +SPSQFEAHAGWP+RRKP+ NIYTSNGVSLHEL+ISLS++R+ ST ENDDLCSIC DGG+LLCCDTCPRAFHLECISL RIP  +W+CRYCQN  Q EK VE N NALAAGRVAG DPIEQITKR IRI+KT E
Sbjct:  684 DSLVSPSQFEAHAGWPTRRKPYLNIYTSNGVSLHELAISLSRSRRLSTNENDDLCSICFDGGDLLCCDTCPRAFHLECISLSRIPKDSWNCRYCQNIHQMEKLVEHNVNALAAGRVAGADPIEQITKRCIRIVKTLE 820          
BLAST of g.arboreum_cottongen_reftransV1_0009137 vs. ExPASy TrEMBL
Match: B9HQQ4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s00930g PE=4 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 8.109e-70
Identity = 107/137 (78.10%), Postives = 120/137 (87.59%), Query Frame = 2
Query:    2 NSEISPSQFEAHAGWPSRRKPFQNIYTSNGVSLHELSISLSKNRKFSTYENDDLCSICLDGGNLLCCDTCPRAFHLECISLPRIPIGTWHCRYCQNTFQKEKFVERNANALAAGRVAGIDPIEQITKRSIRIIKTPE 412
            N+E+SPSQFEAHAGW SRRKP+ +IYTSNGVSLHEL+ISLSK R+ ST ENDDLC IC DGG LLCCD CPRAFH EC+SLP IP G W+C+YC NTF+KEKFVERNANA+AAGRVAG DPIEQIT+R IRI+KT E
Sbjct:  525 NTEVSPSQFEAHAGWASRRKPYLHIYTSNGVSLHELAISLSKCRRHSTKENDDLCQICRDGGKLLCCDVCPRAFHQECLSLPSIPKGKWYCKYCLNTFEKEKFVERNANAIAAGRVAGTDPIEQITRRCIRIVKTFE 661          
BLAST of g.arboreum_cottongen_reftransV1_0009137 vs. ExPASy TrEMBL
Match: B9SCL9_RICCO (Protein binding protein, putative OS=Ricinus communis GN=RCOM_0475450 PE=4 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 8.023e-69
Identity = 101/135 (74.81%), Postives = 122/135 (90.37%), Query Frame = 2
Query:    2 NSEISPSQFEAHAGWPSRRKPFQNIYTSNGVSLHELSISLSKNRKFSTYENDDLCSICLDGGNLLCCDTCPRAFHLECISLPRIPIGTWHCRYCQNTFQKEKFVERNANALAAGRVAGIDPIEQITKRSIRIIKT 406
            N+E+SPSQFEAHAGW SRRKP+ +IYTSNGVSLHEL+ISLSK+RKFST++NDDLC IC DGG+LLCCD CPRA+H +C++LP IP G W+C++C N FQKEKFVE NANA+AAGRVAG+DPI+QIT+R IRI+KT
Sbjct:  617 NTEVSPSQFEAHAGWASRRKPYLHIYTSNGVSLHELAISLSKSRKFSTHQNDDLCQICRDGGDLLCCDVCPRAYHKDCLALPEIPTGRWYCKFCLNNFQKEKFVEHNANAIAAGRVAGVDPIDQITRRCIRIVKT 751          
BLAST of g.arboreum_cottongen_reftransV1_0009137 vs. ExPASy TrEMBL
Match: A0A0A0KBK0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G148350 PE=4 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 2.073e-68
Identity = 106/137 (77.37%), Postives = 119/137 (86.86%), Query Frame = 2
Query:    2 NSEISPSQFEAHAGWPSRRKPFQNIYTSNGVSLHELSISLSKNRKFSTYENDDLCSICLDGGNLLCCDTCPRAFHLECISLPRIPIGTWHCRYCQNTFQKEKFVERNANALAAGRVAGIDPIEQITKRSIRIIKTPE 412
            NSE+SPSQFEAHAGW SRRKP+ +IYTSNGVSLHELSISLSK RKFS  +NDDLCSIC DGG+LLCCD CPR+FH +C+ L  IP G W+C+YCQN FQKEKFVE NANA+AAGRVAG+DPIEQIT R IRI+KT E
Sbjct:  549 NSEVSPSQFEAHAGWASRRKPYLHIYTSNGVSLHELSISLSKGRKFSLTDNDDLCSICADGGDLLCCDGCPRSFHRDCVPLQCIPTGIWYCKYCQNLFQKEKFVEHNANAVAAGRVAGVDPIEQITTRCIRIVKTME 685          
BLAST of g.arboreum_cottongen_reftransV1_0009137 vs. ExPASy TrEMBL
Match: D7SN93_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0061g00840 PE=4 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 2.895e-66
Identity = 102/135 (75.56%), Postives = 114/135 (84.44%), Query Frame = 2
Query:    2 NSEISPSQFEAHAGWPSRRKPFQNIYTSNGVSLHELSISLSKNRKFSTYENDDLCSICLDGGNLLCCDTCPRAFHLECISLPRIPIGTWHCRYCQNTFQKEKFVERNANALAAGRVAGIDPIEQITKRSIRIIKT 406
            NSE+SPSQFEAHAGW SRRKP+ +IYTSNGVSLHE SISLS+ R+ S  +NDDLCSICLDGGNLLCCD CPR FH EC+SL  IP G W C++C N  QKEKFVE NANA+AAGRVAG+DPIEQITKR IRI+ T
Sbjct:  414 NSEVSPSQFEAHAGWASRRKPYLHIYTSNGVSLHEFSISLSRGREISVSDNDDLCSICLDGGNLLCCDGCPRVFHKECVSLANIPKGKWFCKFCNNMLQKEKFVEHNANAVAAGRVAGVDPIEQITKRCIRIVNT 548          
BLAST of g.arboreum_cottongen_reftransV1_0009137 vs. ExPASy TrEMBL
Match: A5BY95_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017668 PE=4 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 3.303e-66
Identity = 102/135 (75.56%), Postives = 114/135 (84.44%), Query Frame = 2
Query:    2 NSEISPSQFEAHAGWPSRRKPFQNIYTSNGVSLHELSISLSKNRKFSTYENDDLCSICLDGGNLLCCDTCPRAFHLECISLPRIPIGTWHCRYCQNTFQKEKFVERNANALAAGRVAGIDPIEQITKRSIRIIKT 406
            NSE+SPSQFEAHAGW SRRKP+ +IYTSNGVSLHE SISLS+ R+ S  +NDDLCSICLDGGNLLCCD CPR FH EC+SL  IP G W C++C N  QKEKFVE NANA+AAGRVAG+DPIEQITKR IRI+ T
Sbjct:  449 NSEVSPSQFEAHAGWASRRKPYLHIYTSNGVSLHEFSISLSRGREISVSDNDDLCSICLDGGNLLCCDGCPRVFHKECVSLANIPKGKWFCKFCNNMLQKEKFVEHNANAVAAGRVAGVDPIEQITKRCIRIVNT 583          
BLAST of g.arboreum_cottongen_reftransV1_0009137 vs. ExPASy TrEMBL
Match: M0ZI39_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400000459 PE=4 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 1.368e-65
Identity = 100/137 (72.99%), Postives = 116/137 (84.67%), Query Frame = 2
Query:    2 NSEISPSQFEAHAGWPSRRKPFQNIYTSNGVSLHELSISLSKNRKFSTYENDDLCSICLDGGNLLCCDTCPRAFHLECISLPRIPIGTWHCRYCQNTFQKEKFVERNANALAAGRVAGIDPIEQITKRSIRIIKTPE 412
            N+E+SPSQFEAHAG  SRRKP+  IYTSNGVSLHELSI LSK R+ S  ENDDLCSIC DGG+LLCCD CPRAFH EC+ LP IP GTW+C+YC+N F KE+FVE NANA+AAGRVAG+D IEQIT+R IR+++T E
Sbjct:  635 NTEVSPSQFEAHAGCASRRKPYLYIYTSNGVSLHELSIKLSKERRSSAEENDDLCSICADGGDLLCCDNCPRAFHAECVCLPSIPTGTWYCKYCENMFAKERFVENNANAIAAGRVAGVDAIEQITRRCIRMVETLE 771          
BLAST of g.arboreum_cottongen_reftransV1_0009137 vs. ExPASy TrEMBL
Match: K4D9Q5_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc11g066480.1 PE=4 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 8.623e-65
Identity = 100/137 (72.99%), Postives = 115/137 (83.94%), Query Frame = 2
Query:    2 NSEISPSQFEAHAGWPSRRKPFQNIYTSNGVSLHELSISLSKNRKFSTYENDDLCSICLDGGNLLCCDTCPRAFHLECISLPRIPIGTWHCRYCQNTFQKEKFVERNANALAAGRVAGIDPIEQITKRSIRIIKTPE 412
            N+E+SPSQFEAHAG  SRRKP+  IYTSNGVSLHELSI LSK R+ S  ENDDLCSIC DGG+LLCCD CPRAFH EC+ LP IP GTW+C+YC+N F KE+FVE NANA AAGRVAG+D IEQIT+R IR+++T E
Sbjct:  650 NTEVSPSQFEAHAGCASRRKPYLYIYTSNGVSLHELSIKLSKERRSSAEENDDLCSICADGGDLLCCDNCPRAFHTECVCLPSIPTGTWYCKYCENMFAKERFVENNANAKAAGRVAGVDAIEQITRRCIRMVETLE 786          
BLAST of g.arboreum_cottongen_reftransV1_0009137 vs. ExPASy TrEMBL
Match: F6HKE7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g04490 PE=4 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 1.785e-64
Identity = 99/131 (75.57%), Postives = 111/131 (84.73%), Query Frame = 2
Query:    8 EISPSQFEAHAGWPSRRKPFQNIYTSNGVSLHELSISLSKNRKFSTYENDDLCSICLDGGNLLCCDTCPRAFHLECISLPRIPIGTWHCRYCQNTFQKEKFVERNANALAAGRVAGIDPIEQITKRSIRII 400
            E+S SQFEAHAGW SR+KP+  IYTSNGVSLHEL+ISLSK RK+S  +NDDLCSIC DGGNLL CD CPRAFH  C SLP IP   W+CRYCQN FQ+EKFVE NANA+AAGRV+G+DPIEQITKR IRI+
Sbjct:   92 EVSASQFEAHAGWASRKKPYSYIYTSNGVSLHELAISLSKGRKYSARDNDDLCSICGDGGNLLLCDGCPRAFHRVCASLPSIPQDDWYCRYCQNMFQREKFVEHNANAVAAGRVSGVDPIEQITKRCIRIV 222          
BLAST of g.arboreum_cottongen_reftransV1_0009137 vs. ExPASy TrEMBL
Match: M5W7H1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001370mg PE=4 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 3.172e-64
Identity = 98/137 (71.53%), Postives = 117/137 (85.40%), Query Frame = 2
Query:    2 NSEISPSQFEAHAGWPSRRKPFQNIYTSNGVSLHELSISLSKNRKFSTYENDDLCSICLDGGNLLCCDTCPRAFHLECISLPRIPIGTWHCRYCQNTFQKEKFVERNANALAAGRVAGIDPIEQITKRSIRIIKTPE 412
            NSE+SPSQFEAHAGW SRRKP+  IYTSNGVSLHEL+ISLS+ RK+S+ +NDDLC IC DGGNL+ CD CPRAFH +C SLP +P G W+C++CQN FQ+EKFVE N NA+AAGR++GIDPIEQIT+R IRI+K  E
Sbjct:  425 NSEVSPSQFEAHAGWASRRKPYAYIYTSNGVSLHELAISLSRGRKYSSKDNDDLCIICADGGNLVLCDGCPRAFHRDCASLPNVPRGDWYCKFCQNMFQREKFVEHNENAVAAGRISGIDPIEQITQRCIRIVKDIE 561          
BLAST of g.arboreum_cottongen_reftransV1_0009137 vs. ExPASy Swiss-Prot
Match: AIRE_HUMAN (Autoimmune regulator OS=Homo sapiens GN=AIRE PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.017e-13
Identity = 31/54 (57.41%), Postives = 38/54 (70.37%), Query Frame = 2
Query:  149 ENDDLCSICLDGGNLLCCDTCPRAFHLECISLP--RIPIGTWHCRYC-QNTFQK 301
            +N+D C++C DGG L+CCD CPRAFHL C+S P   IP GTW C  C Q T Q+
Sbjct:  294 KNEDECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQATVQE 347          
BLAST of g.arboreum_cottongen_reftransV1_0009137 vs. ExPASy Swiss-Prot
Match: IDM1_ARATH (Increased DNA methylation 1 OS=Arabidopsis thaliana GN=IDM1 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.866e-12
Identity = 37/106 (34.91%), Postives = 53/106 (50.00%), Query Frame = 2
Query:    2 NSEISPSQFEAHAGWPSRRKPFQNIYTSNG-----VSLHELSISLSKNRKFSTYE-------NDDLCSICLDGGNLLCCDTCPRAFHLECISLPRIPIGTWHCRYC 283
            N  +S S+F+ HAG+ ++  P  N++  +G       L   S      R     E       NDD C +C DGG L+CCD CP  FH  C+S+  +P G+W+C  C
Sbjct:  664 NKTVSLSEFKNHAGF-NQNCPCLNLFMGSGKPFASCQLEAWSAEYKARRNGWRLEKASDDDPNDDSCGVCGDGGELICCDNCPSTFHQACLSMQVLPEGSWYCSSC 768          
BLAST of g.arboreum_cottongen_reftransV1_0009137 vs. ExPASy Swiss-Prot
Match: AIRE_MOUSE (Autoimmune regulator OS=Mus musculus GN=Aire PE=1 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 8.570e-12
Identity = 31/60 (51.67%), Postives = 37/60 (61.67%), Query Frame = 2
Query:  149 ENDDLCSICLDGGNLLCCDTCPRAFHLECISLP--RIPIGTWHCRYC------QNTFQKE 304
            +N+D C++C DGG L+CCD CPRAFHL C+S P   IP G W C  C      QN  Q E
Sbjct:  296 KNEDECAVCHDGGELICCDGCPRAFHLACLSPPLQEIPSGLWRCSCCLQGRVQQNLSQPE 355          
BLAST of g.arboreum_cottongen_reftransV1_0009137 vs. ExPASy Swiss-Prot
Match: TRI66_HUMAN (Tripartite motif-containing protein 66 OS=Homo sapiens GN=TRIM66 PE=2 SV=4)

HSP 1 Score: 64.6994 bits (156), Expect = 3.712e-11
Identity = 27/54 (50.00%), Postives = 35/54 (64.81%), Query Frame = 2
Query:  149 ENDDLCSICLDGGNLLCCDTCPRAFHLEC--ISLPRIPIGTWHCRYCQNTFQKE 304
            EN+D C++CL+GG LLCCD CP+ FHL C   +L   P G W C  C++  Q E
Sbjct:  968 ENEDFCAVCLNGGELLCCDRCPKVFHLSCHVPALLSFPGGEWVCTLCRSLTQPE 1021          
BLAST of g.arboreum_cottongen_reftransV1_0009137 vs. ExPASy Swiss-Prot
Match: RCO1_YEAST (Transcriptional regulatory protein RCO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RCO1 PE=1 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 3.925e-11
Identity = 26/58 (44.83%), Postives = 34/58 (58.62%), Query Frame = 2
Query:  125 KNRKFSTYENDDLCSICLDGGNLLCCDTCPRAFHLECISLP----RIPIGTWHCRYCQ 286
            KN     +EN+D CS C   G+ LCCDTCP++FH  C+  P     +P G WHC  C+
Sbjct:  250 KNNSTIDFENEDFCSACNQSGSFLCCDTCPKSFHFLCLDPPIDPNNLPKGDWHCNECK 307          
BLAST of g.arboreum_cottongen_reftransV1_0009137 vs. ExPASy Swiss-Prot
Match: CHD4_HUMAN (Chromodomain-helicase-DNA-binding protein 4 OS=Homo sapiens GN=CHD4 PE=1 SV=2)

HSP 1 Score: 63.1586 bits (152), Expect = 1.154e-10
Identity = 26/51 (50.98%), Postives = 32/51 (62.75%), Query Frame = 2
Query:  149 ENDD----LCSICLDGGNLLCCDTCPRAFHLECIS--LPRIPIGTWHCRYC 283
            E DD     C +C DGG LLCCDTCP ++H+ C++  LP IP G W C  C
Sbjct:  443 EEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRC 493          

HSP 2 Score: 58.151 bits (139), Expect = 4.892e-9
Identity = 22/51 (43.14%), Postives = 32/51 (62.75%), Query Frame = 2
Query:  146 YEND--DLCSICLDGGNLLCCDTCPRAFHLECI--SLPRIPIGTWHCRYCQ 286
            YE D  D C +C  GG ++ CDTCPRA+H+ C+   + + P G W C +C+
Sbjct:  365 YETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCE 415          
BLAST of g.arboreum_cottongen_reftransV1_0009137 vs. ExPASy Swiss-Prot
Match: CHD4_MOUSE (Chromodomain-helicase-DNA-binding protein 4 OS=Mus musculus GN=Chd4 PE=1 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 1.154e-10
Identity = 26/51 (50.98%), Postives = 32/51 (62.75%), Query Frame = 2
Query:  149 ENDD----LCSICLDGGNLLCCDTCPRAFHLECIS--LPRIPIGTWHCRYC 283
            E DD     C +C DGG LLCCDTCP ++H+ C++  LP IP G W C  C
Sbjct:  436 EEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRC 486          

HSP 2 Score: 60.077 bits (144), Expect = 1.081e-9
Identity = 28/80 (35.00%), Postives = 42/80 (52.50%), Query Frame = 2
Query:  146 YEND--DLCSICLDGGNLLCCDTCPRAFHLECI--SLPRIPIGTWHCRYCQNTFQKEKFVERNANALAAGRVAGIDPIEQ 373
            YE D  D C +C  GG ++ CDTCPRA+H+ C+   + + P G W C +C+    + +  E N+         G DP E+
Sbjct:  358 YETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQWEAKEDNSEGEEILEEVGGDPEEE 437          
BLAST of g.arboreum_cottongen_reftransV1_0009137 vs. ExPASy Swiss-Prot
Match: CHD3_DROME (Chromodomain-helicase-DNA-binding protein 3 OS=Drosophila melanogaster GN=Chd3 PE=2 SV=3)

HSP 1 Score: 62.7734 bits (151), Expect = 1.451e-10
Identity = 24/54 (44.44%), Postives = 33/54 (61.11%), Query Frame = 2
Query:  128 NRKFSTYENDDLCSICLDGGNLLCCDTCPRAFHLECISLP--RIPIGTWHCRYC 283
            N K   + +++ C +C DGG+LLCCD+CP  +H  C+S P   IP G W C  C
Sbjct:   26 NAKKQKFRDEEYCKVCSDGGDLLCCDSCPSVYHRTCLSPPLKSIPKGDWICPRC 79          
BLAST of g.arboreum_cottongen_reftransV1_0009137 vs. ExPASy Swiss-Prot
Match: TRI66_MOUSE (Tripartite motif-containing protein 66 OS=Mus musculus GN=Trim66 PE=1 SV=3)

HSP 1 Score: 62.3882 bits (150), Expect = 1.717e-10
Identity = 26/63 (41.27%), Postives = 38/63 (60.32%), Query Frame = 2
Query:  122 SKNRKFSTYENDDLCSICLDGGNLLCCDTCPRAFHLEC--ISLPRIPIGTWHCRYCQNTFQKE 304
            +K    +  EN+D C++C++GG LLCCD CP+ +HL C   +L   P G W C  C++  Q E
Sbjct:  985 AKKNTPAPIENEDFCAVCINGGELLCCDRCPKVYHLSCHVPALLSFPGGEWVCTLCRSLTQPE 1047          
BLAST of g.arboreum_cottongen_reftransV1_0009137 vs. ExPASy Swiss-Prot
Match: TRI33_XENLA (E3 ubiquitin-protein ligase TRIM33 OS=Xenopus laevis GN=trim33 PE=1 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 1.832e-10
Identity = 28/79 (35.44%), Postives = 47/79 (59.49%), Query Frame = 2
Query:  152 NDDLCSICLDGGNLLCCDTCPRAFHLEC--ISLPRIPIGTWHCRYCQ--NTFQKEKFVERNANALAAGRVAGIDPIEQI 376
            N+D C++C +GG+LLCC+ CP+ FHL C   +L   P G W C +C+  N  + E   + + ++     V G+ P++Q+
Sbjct:  849 NEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGEWICTFCRDLNKPEVEYDCDNSQHSKKGKTVQGLSPVDQM 927          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0009137 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A059DB74_EUCGR2.810e-7078.83Uncharacterized protein OS=Eucalyptus grandis GN=E... [more]
B9HQQ4_POPTR8.109e-7078.10Uncharacterized protein OS=Populus trichocarpa GN=... [more]
B9SCL9_RICCO8.023e-6974.81Protein binding protein, putative OS=Ricinus commu... [more]
A0A0A0KBK0_CUCSA2.073e-6877.37Uncharacterized protein OS=Cucumis sativus GN=Csa_... [more]
D7SN93_VITVI2.895e-6675.56Putative uncharacterized protein OS=Vitis vinifera... [more]
A5BY95_VITVI3.303e-6675.56Putative uncharacterized protein OS=Vitis vinifera... [more]
M0ZI39_SOLTU1.368e-6572.99Uncharacterized protein OS=Solanum tuberosum GN=PG... [more]
K4D9Q5_SOLLC8.623e-6572.99Uncharacterized protein OS=Solanum lycopersicum GN... [more]
F6HKE7_VITVI1.785e-6475.57Putative uncharacterized protein OS=Vitis vinifera... [more]
M5W7H1_PRUPE3.172e-6471.53Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0009137 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
AIRE_HUMAN3.017e-1357.41Autoimmune regulator OS=Homo sapiens GN=AIRE PE=1 ... [more]
IDM1_ARATH1.866e-1234.91Increased DNA methylation 1 OS=Arabidopsis thalian... [more]
AIRE_MOUSE8.570e-1251.67Autoimmune regulator OS=Mus musculus GN=Aire PE=1 ... [more]
TRI66_HUMAN3.712e-1150.00Tripartite motif-containing protein 66 OS=Homo sap... [more]
RCO1_YEAST3.925e-1144.83Transcriptional regulatory protein RCO1 OS=Sacchar... [more]
CHD4_HUMAN1.154e-1050.98Chromodomain-helicase-DNA-binding protein 4 OS=Hom... [more]
CHD4_MOUSE1.154e-1050.98Chromodomain-helicase-DNA-binding protein 4 OS=Mus... [more]
CHD3_DROME1.451e-1044.44Chromodomain-helicase-DNA-binding protein 3 OS=Dro... [more]
TRI66_MOUSE1.717e-1041.27Tripartite motif-containing protein 66 OS=Mus musc... [more]
TRI33_XENLA1.832e-1035.44E3 ubiquitin-protein ligase TRIM33 OS=Xenopus laev... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 19..60
e-value: 3.2E-10
score: 50.0
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 6..67
e-value: 2.5E-18
score: 64.9
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 20..61
e-value: 2.1E-8
score: 33.8
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 17..62
score: 10.033
NoneNo IPR availablePANTHERPTHR24098:SF5ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEINcoord: 1..67
NoneNo IPR availablePANTHERPTHR24098FAMILY NOT NAMEDcoord: 1..67
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 20..59
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 8..65

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0009137 ID=g.arboreum_cottongen_reftransV1_0009137; Name=g.arboreum_cottongen_reftransV1_0009137; organism=Gossypium arboreum; type=contig; length=413bp
TAATTCAGAGATAAGCCCCTCACAGTTTGAAGCTCATGCTGGTTGGCCAA
GTCGTCGCAAGCCTTTTCAAAACATTTACACATCAAATGGGGTATCTCTT
CATGAATTGTCAATATCCCTGTCGAAAAATCGGAAGTTCTCTACATATGA
GAATGATGACCTATGCAGCATCTGTTTGGATGGAGGGAATCTATTGTGTT
GTGACACATGTCCAAGGGCTTTTCACTTAGAGTGTATATCTCTTCCACGC
ATTCCAATTGGTACTTGGCACTGTAGATATTGCCAGAATACCTTCCAAAA
GGAAAAGTTTGTGGAACGTAATGCCAATGCTCTAGCTGCTGGAAGAGTTG
CGGGAATTGATCCAATAGAACAGATAACAAAGAGATCCATTCGAATCATC
AAAACTCCTGAGA
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR013083Znf_RING/FYVE/PHD
IPR019787Znf_PHD-finger
IPR019786Zinc_finger_PHD-type_CS
IPR011011Znf_FYVE_PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding