g.arboreum_cottongen_reftransV1_0022276, g.arboreum_cottongen_reftransV1_0022276 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0022276
Unique Nameg.arboreum_cottongen_reftransV1_0022276
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length1185
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr10chromosomeg.arboreum_cottongen_reftransV1_0022276:1..1185 .
Chr10:88327924..88329606 +
n/a
Homology
BLAST of g.arboreum_cottongen_reftransV1_0022276 vs. ExPASy TrEMBL
Match: A0A061FNK0_THECC (Pseudo response regulator, putative isoform 5 OS=Theobroma cacao GN=TCM_043038 PE=4 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 3.148e-42
Identity = 155/423 (36.64%), Postives = 214/423 (50.59%), Query Frame = 1
Query:    1 SSWTKRAAEGESSQPMSSLNRFPGAPNSTCAQVVHVKHEKRRSPWTCVTQRKECQEQHEQLLDATEGKDLEVRVESNNEWQCGNQCKNSPTHLA------------EAASKTFDRGWFEHQDENITG--KDRIPDIIATLQ-----QAECRASDAPGGPSDVPQLKDGACHGSEEKLSFELTLKRWQGASDGRNAANDGHNVLRHXXXXXXXXXXXXXXXKQALTGNVGSCSPLDHSSVTKKTEIMCTFPSHSNGILLNQSSVGSNNKNDMTTTAKFVGPKPKALVDKSGSISTFKCLH-SSSFQPM---HGCCICSSQEVSPETVGHDTS----LKIMAITDKQCRXXXXXXXXXXXXXXXXXXXXXXETGLRAEHAVMEDXXXXXXXXXXXXXXXE-DRVAQRAAALTKFRQKRKERCFEK 1185
            SSWTKRA E +SSQP+S  ++    P+STCAQV+H +HE     W  VT  +E  E   +L +   GKDLE+ V      Q  +  +   T++A            +   +  ++   E   E   G  +++  D+I  +        E    D P G   V   K+   + ++E    EL+LKR +   D   +A++  NVLRHSD SAFS+Y++ S+A QA TGNVGSCSPLD+SS   KT+ M  F S SN I   Q S GS+N NDM +T      KP  L DK    ++ K  H SS+FQP+   HG  +    + +P+    + S    ++  A      RS+S  N  ++G N  S   N     L +E+ V   G       SGG    + +R AQR AAL KFRQKRKERCFEK
Sbjct:  275 SSWTKRAVEVDSSQPISPWDQLADPPHSTCAQVIHSRHEVLGDSWVPVTATREYDELDNELENVVMGKDLEIGVPKITASQLEDPSEKVMTNIAGVNKDKLSAINPKKDDEKLEKAQLELNSEKSGGDLRNQAADLIGVITNNTEPHIESAVFDIPNGLPKVSDAKEKVNYDTKEMPFLELSLKRLRDVGDTGTSAHE-RNVLRHSDLSAFSRYNSGSTANQAPTGNVGSCSPLDNSSEAVKTDSMKNFQSTSNSIPPKQQSNGSSNNNDMGSTTNNAFSKPAVLSDKPAPKTSAKSFHPSSAFQPVQSGHGSALQPVAQAAPQCGSSNLSSLPHVEGNAANHSLTRSASGSNHGSNGQNGSSTVLNTRGMNLESENGVPGKGGAGGGIGSGGRNVVDQNRFAQREAALNKFRQKRKERCFEK 696          
BLAST of g.arboreum_cottongen_reftransV1_0022276 vs. ExPASy TrEMBL
Match: A0A061FMB9_THECC (Pseudo response regulator, putative isoform 7 (Fragment) OS=Theobroma cacao GN=TCM_043038 PE=4 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 7.152e-42
Identity = 156/424 (36.79%), Postives = 215/424 (50.71%), Query Frame = 1
Query:    1 SSWTKRAAEGESSQPMSSLNRFPGAPNSTCAQVVHVKHEKRRSPWTCVTQRKECQEQHEQLLDATEGKDLEVRVESNNEWQCGNQCKNSPTHLA------------EAASKTFDRGWFEHQDENITG--KDRIPDIIATLQ-----QAECRASDAPGGPSDVPQLKDGACHGSEEKLSFELTLKRWQGASDGRNAANDGHNVLRHXXXXXXXXXXXXXXXKQALTGNVGSCSPLDHSSVTKKTEIMCTFPSHSNGILLNQSSVGSNNKNDMTTTAKFVGPKPKALVDKSGSISTFKCLH-SSSFQPM---HGCCI-CSSQEVSPETVGHDTS----LKIMAITDKQCRXXXXXXXXXXXXXXXXXXXXXXETGLRAEHAVMEDXXXXXXXXXXXXXXXE-DRVAQRAAALTKFRQKRKERCFEK 1185
            SSWTKRA E +SSQP+S  ++    P+STCAQV+H +HE     W  VT  +E  E   +L +   GKDLE+ V      Q  +  +   T++A            +   +  ++   E   E   G  +++  D+I  +        E    D P G   V   K+   + ++E    EL+LKR +   D   +A++  NVLRHSD SAFS+Y++ S+A QA TGNVGSCSPLD+SS   KT+ M  F S SN I   Q S GS+N NDM +T      KP  L DK    ++ K  H SS+FQP+   HG  +   +Q  +P+    + S    ++  A      RS+S  N  ++G N  S   N     L +E+ V   G       SGG    + +R AQR AAL KFRQKRKERCFEK
Sbjct:  259 SSWTKRAVEVDSSQPISPWDQLADPPHSTCAQVIHSRHEVLGDSWVPVTATREYDELDNELENVVMGKDLEIGVPKITASQLEDPSEKVMTNIAGVNKDKLSAINPKKDDEKLEKAQLELNSEKSGGDLRNQAADLIGVITNNTEPHIESAVFDIPNGLPKVSDAKEKVNYDTKEMPFLELSLKRLRDVGDTGTSAHE-RNVLRHSDLSAFSRYNSGSTANQAPTGNVGSCSPLDNSSEAVKTDSMKNFQSTSNSIPPKQQSNGSSNNNDMGSTTNNAFSKPAVLSDKPAPKTSAKSFHPSSAFQPVQSGHGSALQPVAQAAAPQCGSSNLSSLPHVEGNAANHSLTRSASGSNHGSNGQNGSSTVLNTRGMNLESENGVPGKGGAGGGIGSGGRNVVDQNRFAQREAALNKFRQKRKERCFEK 681          
BLAST of g.arboreum_cottongen_reftransV1_0022276 vs. ExPASy TrEMBL
Match: A0A061FP64_THECC (Pseudo response regulator, putative isoform 4 OS=Theobroma cacao GN=TCM_043038 PE=4 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 8.556e-42
Identity = 156/424 (36.79%), Postives = 215/424 (50.71%), Query Frame = 1
Query:    1 SSWTKRAAEGESSQPMSSLNRFPGAPNSTCAQVVHVKHEKRRSPWTCVTQRKECQEQHEQLLDATEGKDLEVRVESNNEWQCGNQCKNSPTHLA------------EAASKTFDRGWFEHQDENITG--KDRIPDIIATLQ-----QAECRASDAPGGPSDVPQLKDGACHGSEEKLSFELTLKRWQGASDGRNAANDGHNVLRHXXXXXXXXXXXXXXXKQALTGNVGSCSPLDHSSVTKKTEIMCTFPSHSNGILLNQSSVGSNNKNDMTTTAKFVGPKPKALVDKSGSISTFKCLH-SSSFQPM---HGCCI-CSSQEVSPETVGHDTS----LKIMAITDKQCRXXXXXXXXXXXXXXXXXXXXXXETGLRAEHAVMEDXXXXXXXXXXXXXXXE-DRVAQRAAALTKFRQKRKERCFEK 1185
            SSWTKRA E +SSQP+S  ++    P+STCAQV+H +HE     W  VT  +E  E   +L +   GKDLE+ V      Q  +  +   T++A            +   +  ++   E   E   G  +++  D+I  +        E    D P G   V   K+   + ++E    EL+LKR +   D   +A++  NVLRHSD SAFS+Y++ S+A QA TGNVGSCSPLD+SS   KT+ M  F S SN I   Q S GS+N NDM +T      KP  L DK    ++ K  H SS+FQP+   HG  +   +Q  +P+    + S    ++  A      RS+S  N  ++G N  S   N     L +E+ V   G       SGG    + +R AQR AAL KFRQKRKERCFEK
Sbjct:  275 SSWTKRAVEVDSSQPISPWDQLADPPHSTCAQVIHSRHEVLGDSWVPVTATREYDELDNELENVVMGKDLEIGVPKITASQLEDPSEKVMTNIAGVNKDKLSAINPKKDDEKLEKAQLELNSEKSGGDLRNQAADLIGVITNNTEPHIESAVFDIPNGLPKVSDAKEKVNYDTKEMPFLELSLKRLRDVGDTGTSAHE-RNVLRHSDLSAFSRYNSGSTANQAPTGNVGSCSPLDNSSEAVKTDSMKNFQSTSNSIPPKQQSNGSSNNNDMGSTTNNAFSKPAVLSDKPAPKTSAKSFHPSSAFQPVQSGHGSALQPVAQAAAPQCGSSNLSSLPHVEGNAANHSLTRSASGSNHGSNGQNGSSTVLNTRGMNLESENGVPGKGGAGGGIGSGGRNVVDQNRFAQREAALNKFRQKRKERCFEK 697          
BLAST of g.arboreum_cottongen_reftransV1_0022276 vs. ExPASy TrEMBL
Match: A0A061FMB4_THECC (Pseudo response regulator, putative isoform 2 OS=Theobroma cacao GN=TCM_043038 PE=4 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.500e-41
Identity = 156/424 (36.79%), Postives = 215/424 (50.71%), Query Frame = 1
Query:    1 SSWTKRAAEGESSQPMSSLNRFPGAPNSTCAQVVHVKHEKRRSPWTCVTQRKECQEQHEQLLDATEGKDLEVRVESNNEWQCGNQCKNSPTHLA------------EAASKTFDRGWFEHQDENITG--KDRIPDIIATLQ-----QAECRASDAPGGPSDVPQLKDGACHGSEEKLSFELTLKRWQGASDGRNAANDGHNVLRHXXXXXXXXXXXXXXXKQALTGNVGSCSPLDHSSVTKKTEIMCTFPSHSNGILLNQSSVGSNNKNDMTTTAKFVGPKPKALVDKSGSISTFKCLH-SSSFQPM---HGCCI-CSSQEVSPETVGHDTS----LKIMAITDKQCRXXXXXXXXXXXXXXXXXXXXXXETGLRAEHAVMEDXXXXXXXXXXXXXXXE-DRVAQRAAALTKFRQKRKERCFEK 1185
            SSWTKRA E +SSQP+S  ++    P+STCAQV+H +HE     W  VT  +E  E   +L +   GKDLE+ V      Q  +  +   T++A            +   +  ++   E   E   G  +++  D+I  +        E    D P G   V   K+   + ++E    EL+LKR +   D   +A++  NVLRHSD SAFS+Y++ S+A QA TGNVGSCSPLD+SS   KT+ M  F S SN I   Q S GS+N NDM +T      KP  L DK    ++ K  H SS+FQP+   HG  +   +Q  +P+    + S    ++  A      RS+S  N  ++G N  S   N     L +E+ V   G       SGG    + +R AQR AAL KFRQKRKERCFEK
Sbjct:  275 SSWTKRAVEVDSSQPISPWDQLADPPHSTCAQVIHSRHEVLGDSWVPVTATREYDELDNELENVVMGKDLEIGVPKITASQLEDPSEKVMTNIAGVNKDKLSAINPKKDDEKLEKAQLELNSEKSGGDLRNQAADLIGVITNNTEPHIESAVFDIPNGLPKVSDAKEKVNYDTKEMPFLELSLKRLRDVGDTGTSAHE-RNVLRHSDLSAFSRYNSGSTANQAPTGNVGSCSPLDNSSEAVKTDSMKNFQSTSNSIPPKQQSNGSSNNNDMGSTTNNAFSKPAVLSDKPAPKTSAKSFHPSSAFQPVQSGHGSALQPVAQAAAPQCGSSNLSSLPHVEGNAANHSLTRSASGSNHGSNGQNGSSTVLNTRGMNLESENGVPGKGGAGGGIGSGGRNVVDQNRFAQREAALNKFRQKRKERCFEK 697          
BLAST of g.arboreum_cottongen_reftransV1_0022276 vs. ExPASy TrEMBL
Match: A0A061FNK5_THECC (Pseudo response regulator, putative isoform 10 (Fragment) OS=Theobroma cacao GN=TCM_043038 PE=4 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.561e-36
Identity = 117/315 (37.14%), Postives = 163/315 (51.75%), Query Frame = 1
Query:    1 SSWTKRAAEGESSQPMSSLNRFPGAPNSTCAQVVHVKHEKRRSPWTCVTQRKECQEQHEQLLDATEGKDLEVRVESNNEWQCGNQCKNSPTHLA------------EAASKTFDRGWFEHQDENITG--KDRIPDIIATLQQ-----AECRASDAPGGPSDVPQLKDGACHGSEEKLSFELTLKRWQGASDGRNAANDGHNVLRHXXXXXXXXXXXXXXXKQALTGNVGSCSPLDHSSVTKKTEIMCTFPSHSNGILLNQSSVGSNNKNDMTTTAKFVGPKPKALVDKSGSISTFKCLH-SSSFQPM---HGCCI 876
            SSWTKRA E +SSQP+S  ++    P+STCAQV+H +HE     W  VT  +E  E   +L +   GKDLE+ V      Q  +  +   T++A            +   +  ++   E   E   G  +++  D+I  +        E    D P G   V   K+   + ++E    EL+LKR +   D   +A++  NVLRHSD SAFS+Y++ S+A QA TGNVGSCSPLD+SS   KT+ M  F S SN I   Q S GS+N NDM +T      KP  L DK    ++ K  H SS+FQP+   HG  +
Sbjct:   98 SSWTKRAVEVDSSQPISPWDQLADPPHSTCAQVIHSRHEVLGDSWVPVTATREYDELDNELENVVMGKDLEIGVPKITASQLEDPSEKVMTNIAGVNKDKLSAINPKKDDEKLEKAQLELNSEKSGGDLRNQAADLIGVITNNTEPHIESAVFDIPNGLPKVSDAKEKVNYDTKEMPFLELSLKRLRDVGDTGTSAHE-RNVLRHSDLSAFSRYNSGSTANQAPTGNVGSCSPLDNSSEAVKTDSMKNFQSTSNSIPPKQQSNGSSNNNDMGSTTNNAFSKPAVLSDKPAPKTSAKSFHPSSAFQPVQSGHGSAL 411          
BLAST of g.arboreum_cottongen_reftransV1_0022276 vs. ExPASy TrEMBL
Match: A0A061FP68_THECC (Pseudo response regulator, putative isoform 9 (Fragment) OS=Theobroma cacao GN=TCM_043038 PE=4 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 1.218e-35
Identity = 117/315 (37.14%), Postives = 163/315 (51.75%), Query Frame = 1
Query:    1 SSWTKRAAEGESSQPMSSLNRFPGAPNSTCAQVVHVKHEKRRSPWTCVTQRKECQEQHEQLLDATEGKDLEVRVESNNEWQCGNQCKNSPTHLA------------EAASKTFDRGWFEHQDENITG--KDRIPDIIATLQ-----QAECRASDAPGGPSDVPQLKDGACHGSEEKLSFELTLKRWQGASDGRNAANDGHNVLRHXXXXXXXXXXXXXXXKQALTGNVGSCSPLDHSSVTKKTEIMCTFPSHSNGILLNQSSVGSNNKNDMTTTAKFVGPKPKALVDKSGSISTFKCLH-SSSFQPM---HGCCI 876
            SSWTKRA E +SSQP+S  ++    P+STCAQV+H +HE     W  VT  +E  E   +L +   GKDLE+ V      Q  +  +   T++A            +   +  ++   E   E   G  +++  D+I  +        E    D P G   V   K+   + ++E    EL+LKR +   D   +A++  NVLRHSD SAFS+Y++ S+A QA TGNVGSCSPLD+SS   KT+ M  F S SN I   Q S GS+N NDM +T      KP  L DK    ++ K  H SS+FQP+   HG  +
Sbjct:  259 SSWTKRAVEVDSSQPISPWDQLADPPHSTCAQVIHSRHEVLGDSWVPVTATREYDELDNELENVVMGKDLEIGVPKITASQLEDPSEKVMTNIAGVNKDKLSAINPKKDDEKLEKAQLELNSEKSGGDLRNQAADLIGVITNNTEPHIESAVFDIPNGLPKVSDAKEKVNYDTKEMPFLELSLKRLRDVGDTGTSAHE-RNVLRHSDLSAFSRYNSGSTANQAPTGNVGSCSPLDNSSEAVKTDSMKNFQSTSNSIPPKQQSNGSSNNNDMGSTTNNAFSKPAVLSDKPAPKTSAKSFHPSSAFQPVQSGHGSAL 572          
BLAST of g.arboreum_cottongen_reftransV1_0022276 vs. ExPASy TrEMBL
Match: A0A061FUI0_THECC (Pseudo response regulator, putative isoform 1 OS=Theobroma cacao GN=TCM_043038 PE=4 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.282e-35
Identity = 117/315 (37.14%), Postives = 163/315 (51.75%), Query Frame = 1
Query:    1 SSWTKRAAEGESSQPMSSLNRFPGAPNSTCAQVVHVKHEKRRSPWTCVTQRKECQEQHEQLLDATEGKDLEVRVESNNEWQCGNQCKNSPTHLA------------EAASKTFDRGWFEHQDENITG--KDRIPDIIATLQ-----QAECRASDAPGGPSDVPQLKDGACHGSEEKLSFELTLKRWQGASDGRNAANDGHNVLRHXXXXXXXXXXXXXXXKQALTGNVGSCSPLDHSSVTKKTEIMCTFPSHSNGILLNQSSVGSNNKNDMTTTAKFVGPKPKALVDKSGSISTFKCLH-SSSFQPM---HGCCI 876
            SSWTKRA E +SSQP+S  ++    P+STCAQV+H +HE     W  VT  +E  E   +L +   GKDLE+ V      Q  +  +   T++A            +   +  ++   E   E   G  +++  D+I  +        E    D P G   V   K+   + ++E    EL+LKR +   D   +A++  NVLRHSD SAFS+Y++ S+A QA TGNVGSCSPLD+SS   KT+ M  F S SN I   Q S GS+N NDM +T      KP  L DK    ++ K  H SS+FQP+   HG  +
Sbjct:  275 SSWTKRAVEVDSSQPISPWDQLADPPHSTCAQVIHSRHEVLGDSWVPVTATREYDELDNELENVVMGKDLEIGVPKITASQLEDPSEKVMTNIAGVNKDKLSAINPKKDDEKLEKAQLELNSEKSGGDLRNQAADLIGVITNNTEPHIESAVFDIPNGLPKVSDAKEKVNYDTKEMPFLELSLKRLRDVGDTGTSAHE-RNVLRHSDLSAFSRYNSGSTANQAPTGNVGSCSPLDNSSEAVKTDSMKNFQSTSNSIPPKQQSNGSSNNNDMGSTTNNAFSKPAVLSDKPAPKTSAKSFHPSSAFQPVQSGHGSAL 588          
BLAST of g.arboreum_cottongen_reftransV1_0022276 vs. ExPASy TrEMBL
Match: A0A061FN15_THECC (Pseudo response regulator isoform 3 OS=Theobroma cacao GN=TCM_043038 PE=4 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 1.412e-35
Identity = 117/315 (37.14%), Postives = 163/315 (51.75%), Query Frame = 1
Query:    1 SSWTKRAAEGESSQPMSSLNRFPGAPNSTCAQVVHVKHEKRRSPWTCVTQRKECQEQHEQLLDATEGKDLEVRVESNNEWQCGNQCKNSPTHLA------------EAASKTFDRGWFEHQDENITG--KDRIPDIIATLQ-----QAECRASDAPGGPSDVPQLKDGACHGSEEKLSFELTLKRWQGASDGRNAANDGHNVLRHXXXXXXXXXXXXXXXKQALTGNVGSCSPLDHSSVTKKTEIMCTFPSHSNGILLNQSSVGSNNKNDMTTTAKFVGPKPKALVDKSGSISTFKCLH-SSSFQPM---HGCCI 876
            SSWTKRA E +SSQP+S  ++    P+STCAQV+H +HE     W  VT  +E  E   +L +   GKDLE+ V      Q  +  +   T++A            +   +  ++   E   E   G  +++  D+I  +        E    D P G   V   K+   + ++E    EL+LKR +   D   +A++  NVLRHSD SAFS+Y++ S+A QA TGNVGSCSPLD+SS   KT+ M  F S SN I   Q S GS+N NDM +T      KP  L DK    ++ K  H SS+FQP+   HG  +
Sbjct:  275 SSWTKRAVEVDSSQPISPWDQLADPPHSTCAQVIHSRHEVLGDSWVPVTATREYDELDNELENVVMGKDLEIGVPKITASQLEDPSEKVMTNIAGVNKDKLSAINPKKDDEKLEKAQLELNSEKSGGDLRNQAADLIGVITNNTEPHIESAVFDIPNGLPKVSDAKEKVNYDTKEMPFLELSLKRLRDVGDTGTSAHE-RNVLRHSDLSAFSRYNSGSTANQAPTGNVGSCSPLDNSSEAVKTDSMKNFQSTSNSIPPKQQSNGSSNNNDMGSTTNNAFSKPAVLSDKPAPKTSAKSFHPSSAFQPVQSGHGSAL 588          
BLAST of g.arboreum_cottongen_reftransV1_0022276 vs. ExPASy TrEMBL
Match: F2Y9F4_POPTN (Aprr7 (Fragment) OS=Populus tremula GN=aprr7 PE=4 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.323e-35
Identity = 114/307 (37.13%), Postives = 165/307 (53.75%), Query Frame = 1
Query:    1 SSWTKRAAEGESSQPMSSLNR--FPGAPNSTCAQVVHVKHEKRRSPWTCVTQRKECQEQHEQLLDATEGKDLEVRVESNNEWQCGNQCKNSPTHLAEAASKTFDRGWFEHQDENITGKDRIPDIIATLQQAECRASDAPGGPS------------DVPQ-----LKDGACHGSEEKLSFELTLKRWQGASDGRNAANDGHNVLRHXXXXXXXXXXXXXXXKQALTGNVGSCSPLDHSSVTKKTEIMCTFPSHSNGILLNQSSVGSNNKNDMTTTAKFVGPKPKALVDKSGSISTFKCLHSSSFQPMH 864
            SSWTKRA E +S +PMS  ++      P+STCAQV+H + E   + W  +   K+C EQ ++L +   GKDLE+ V      Q  +  K  P ++A+   + F     +H   ++  + ++ +      +   + +D  GG +            DVP       K+   + ++E  SFEL+LKR +   D   +++D  NVLRHSD SAFS+Y++AS+A QA TGNVGSCSPLD+SS   KTE M    S+SN    NQ S GS+N NDM +T      KP  + DK    ST K  + S+FQP+ 
Sbjct:    1 SSWTKRAVEVDSPKPMSPWDQDHLSDPPDSTCAQVIHSRPEACDNSWVPLATTKKCGEQDDELENIVMGKDLEIGVPRIPILQLKDPIKKVPINIADNDGEKFPEIKSKHDGGHLEKRQQVLNSEKRNTELRNQDNDLKGGITNSANPRMDSLVLDVPNGLSSNRKNDVTYETKEVPSFELSLKRLRDIGDAGASSHD-RNVLRHSDLSAFSRYNSASTADQAPTGNVGSCSPLDNSSEAAKTESMQNLQSNSNSTPPNQRSNGSSNNNDMGSTNNITFAKPSVISDKPTLKSTVKSQYPSAFQPVQ 306          
BLAST of g.arboreum_cottongen_reftransV1_0022276 vs. ExPASy TrEMBL
Match: B9HM08_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s04610g PE=4 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 2.600e-35
Identity = 118/310 (38.06%), Postives = 164/310 (52.90%), Query Frame = 1
Query:    1 SSWTKRAAEGESSQPMSSLNR--FPGAPNSTCAQVVHVKHEKRRSPWTCVTQRKECQEQHEQLLDATEGKDLEVRVESNNEWQCGNQCKNSPTHLAEAASKTF-------DRGWFEHQDENIT-----------GKDRIPDII--ATLQQAECRASDAPGGPSDVPQLKDGACHGSEEKLSFELTLKRWQGASDGRNAANDGHNVLRHXXXXXXXXXXXXXXXKQALTGNVGSCSPLDHSSVTKKTEIMCTFPSHSNGILLNQSSVGSNNKNDMTTTAKFVGPKPKALVDKSGSISTFKCLHSSSFQPMH 864
            SSWTKRA E ES +PMS  ++      P+STCAQV+H + E   + W  +   K+C EQ ++L +   GKDLE+ V      Q  +  K  PT++A+   + F       D G  E + + +            G D     I  +   + +    D P G S     K+   + ++E  SFEL+LKR +   D   +++D  NVLRHSD SAFS+Y++AS+A QA TGNVGSCSPLD+SS   KTE M    S+SN    NQ S GS++ NDM +T      KP  + DK     T KC + S+FQP+ 
Sbjct:  125 SSWTKRAVEVESPKPMSPWDQDHLSDPPDSTCAQVIHSRPEACDNSWVPLATMKKCGEQDDELDNIVMGKDLEIGVPRIPNLQLKDPIKRVPTNIADNDGEKFPEIKSKHDGGHLEKRQQELNSEKCNTELRNQGNDLKGGGITNSANPRMDSLVLDVPNGLSS--NRKNEVTYETKEVPSFELSLKRLRDIGDAGASSHD-RNVLRHSDLSAFSRYNSASTADQAPTGNVGSCSPLDNSSEAAKTESMQNLQSNSNSTPPNQRSNGSSHNNDMGSTNNITFAKPSVISDKPTLKPTVKCHYPSAFQPVQ 431          
BLAST of g.arboreum_cottongen_reftransV1_0022276 vs. ExPASy Swiss-Prot
Match: PRR37_ORYSI (Two-component response regulator-like PRR37 OS=Oryza sativa subsp. indica GN=PRR37 PE=2 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 2.626e-23
Identity = 108/301 (35.88%), Postives = 151/301 (50.17%), Query Frame = 1
Query:    1 SSWTKRAAEGESSQPMSSLNRFPGAPNSTCAQVVHVKHEKRRSPWTCVTQRKECQEQHEQLLDATEGKDLEVRVESNNEWQCGNQCKNSPTHLAEAASKTFDRGWFEHQD-------ENITGKD-RIPDIIATLQ-----QAECRASDAPGGPSDVPQLKDGACHGSEEKLSFELTLKRWQGASDGRNAANDGH-NVLRHXXXXXXXXXXXXXXXKQALTGNVGSCSPLDHSSVTKKTEIMCTFPSHSNGILLNQSSVGSNNKNDMTTTAKFVGPKPKALVDKSGSISTFKCL-HSSSFQP 858
            SSWTKRA E +S Q MS  ++    P+STCAQV+H+K +   + W   T  K  ++Q E   D  +GKDLE+    N         ++SP     +   T  R  +  Q+       EN+     R  D+I ++      Q   RA++AP   S VP+ KD   +      S EL+LKR +   D  NA  +   NVLR SD SAF++Y T  ++ Q  TG VGSCSP D+ S   KT+      S+S+   + Q S GS+N NDM +T K V  KP    ++  S S  K   H+S+F P
Sbjct:  245 SSWTKRAVEIDSPQAMSP-DQLADPPDSTCAQVIHLKSDICSNRWLPCTSNKNSKKQKE-TNDDFKGKDLEIGSPRN----LNTAYQSSPNE--RSIKPTDRRNEYPLQNNSKEAAMENLEESSVRAADLIGSMAKNMDAQQAARATNAPNCSSKVPEGKDK--NRDNIMPSLELSLKRSRSTGDDANAIQEEQRNVLRRSDLSAFTRYHTPVASNQGGTGFVGSCSPHDNISEAMKTDSAYNMKSNSDAAPIKQGSNGSSNNNDMGSTTKNVVTKPSTNKERVMSPSAVKANGHTSAFHP 535          
BLAST of g.arboreum_cottongen_reftransV1_0022276 vs. ExPASy Swiss-Prot
Match: PRR37_ORYSJ (Two-component response regulator-like PRR37 OS=Oryza sativa subsp. japonica GN=PRR37 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 3.446e-20
Identity = 106/307 (34.53%), Postives = 150/307 (48.86%), Query Frame = 1
Query:    1 SSWTKRAAEGESSQPMSSLNRFPGAPNSTCAQVVHVKHEKRRSPWTCVTQRKECQEQHEQLLDATEGKDLEVRVESNNEWQCGNQCKNSPTHLAEAASKTFDRGWFEHQDENITGKDRIPDIIATLQQAECRASD-------------------APGGPSDVPQLKDGACHGSEEKLSFELTLKRWQGASDGRNAANDGH-NVLRHXXXXXXXXXXXXXXXKQALTGNVGSCSPLDHSSVTKKTEIMCTFPSHSNGILLNQSSVGSNNKNDMTTTAKFVGPKPKALVDKSGSISTFKCL-HSSSFQP 858
            SSWTKRA E +S Q MS  ++    P+STCAQV+H+K +   + W   T  K  ++Q E   D  +GKDLE+    N         ++SP    E + K  DR     ++E     +     +  L+++  RA+D                   AP   S VP+ KD   +      S EL+LKR +   DG NA  +   NVLR SD SAF++Y T  ++ Q  TG +GSCS  D+SS   KT+      S+S+   + Q S GS+N NDM +T K V  KP    ++  S S  K   H+S+F P
Sbjct:  245 SSWTKRAVEIDSPQAMSP-DQLADPPDSTCAQVIHLKSDICSNRWLPCTSNKNSKKQKE-TNDDFKGKDLEIGSPRN----LNTAYQSSPN---ERSIKPTDR-----RNEYPLQNNSKEAAMENLEESSVRAADLIGSMAKNMDAQQAARAANAPNCSSKVPEGKDK--NRDNIMPSLELSLKRSRSTGDGANAIQEEQRNVLRRSDLSAFTRYHTPVASNQGGTGFMGSCSLHDNSSEAMKTDSAYNMKSNSDAAPIKQGSNGSSNNNDMGSTTKNVVTKPSTNKERVMSPSAVKANGHTSAFHP 535          
BLAST of g.arboreum_cottongen_reftransV1_0022276 vs. ExPASy Swiss-Prot
Match: PRR73_ORYSI (Two-component response regulator-like PRR73 OS=Oryza sativa subsp. indica GN=PRR73 PE=2 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 5.114e-17
Identity = 99/302 (32.78%), Postives = 149/302 (49.34%), Query Frame = 1
Query:    1 SSWTKRAAEGESSQPMSSLNRFPGAPNSTCAQVVHVKHEKRRSPWTCVTQRKECQEQHEQLLDATEGKDLEVRVESNN--EWQCG-NQCKNSPTH-----LAEAASKTFDRGWFEHQDENITGKDRIPDIIATLQQAE-----CRASDAPGGPSDVPQLKDGACHGSEEKLSFELTLKRWQGASDGRNAANDGHNVLRHXXXXXXXXXXXXXXXKQALTGNVGSCSPLDHSSVTKKTEIMCTFPSHSNGILLNQSSVGSNNKNDMTTTAKFVGPKPKALVDKSGSISTFKCL-HSSSFQPMH 864
            SSWTKRA E +S Q MS  ++    P+STCAQV+H   E   + W   T  K   ++H++  D + GK LE+    N+  E+Q    +   +PT      L   +  T +      Q+E  T   +  D+I+++ ++       R ++AP   S VP   D       +  S EL LKR +  +      +D  N+L+ SD SAF++Y T  ++ Q   G  GSCSP D+SS   KT+  C   S+S+   + Q S GS+N NDM ++ K    KP +   K  S S  K   H+S+F P+ 
Sbjct:  270 SSWTKRAVEIDSPQQMSP-DQPSDLPDSTCAQVIHPTSEICSNRW-LPTANKRSGKKHKENNDDSMGKYLEIGAPRNSSMEYQSSPREMSVNPTEKQHETLMPQSKTTRETDSRNTQNEPTT---QTVDLISSIARSTDDKQVVRINNAPDCSSKVPDGNDKNRDSLIDMTSEELGLKRLK-TTGSATEIHDERNILKRSDLSAFTRYHTTVASNQGGAGFGGSCSPQDNSSEALKTDSNCKVKSNSDAAEIKQGSNGSSNNNDMGSSTKNAITKPSSNRGKVISPSAVKATQHTSAFHPVQ 565          
BLAST of g.arboreum_cottongen_reftransV1_0022276 vs. ExPASy Swiss-Prot
Match: PRR73_ORYSJ (Two-component response regulator-like PRR73 OS=Oryza sativa subsp. japonica GN=PRR73 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 6.141e-17
Identity = 99/302 (32.78%), Postives = 149/302 (49.34%), Query Frame = 1
Query:    1 SSWTKRAAEGESSQPMSSLNRFPGAPNSTCAQVVHVKHEKRRSPWTCVTQRKECQEQHEQLLDATEGKDLEVRVESNN--EWQCG-NQCKNSPTH-----LAEAASKTFDRGWFEHQDENITGKDRIPDIIATLQQAE-----CRASDAPGGPSDVPQLKDGACHGSEEKLSFELTLKRWQGASDGRNAANDGHNVLRHXXXXXXXXXXXXXXXKQALTGNVGSCSPLDHSSVTKKTEIMCTFPSHSNGILLNQSSVGSNNKNDMTTTAKFVGPKPKALVDKSGSISTFKCL-HSSSFQPMH 864
            SSWTKRA E +S Q MS  ++    P+STCAQV+H   E   + W   T  K   ++H++  D + GK LE+    N+  E+Q    +   +PT      L   +  T +      Q+E  T   +  D+I+++ ++       R ++AP   S VP   D       +  S EL LKR +  +      +D  N+L+ SD SAF++Y T  ++ Q   G  GSCSP D+SS   KT+  C   S+S+   + Q S GS+N NDM ++ K    KP +   K  S S  K   H+S+F P+ 
Sbjct:  270 SSWTKRAVEIDSPQQMSP-DQPSDLPDSTCAQVIHPTSEICSNRW-LPTANKRSGKKHKENNDDSMGKYLEIGAPRNSSMEYQSSPREMSVNPTEKQHETLMPQSKTTRETDSRNTQNEPTT---QTVDLISSIARSTDDKQVVRINNAPDCSSKVPDGNDKNRDSLIDMTSEELGLKRLK-TTGSATEIHDERNILKRSDLSAFTRYHTTVASNQGGAGFGGSCSPQDNSSEALKTDSNCKVKSNSDAAEIKQGSNGSSNNNDMGSSTKNAITKPSSNRGKVISPSAVKATQHTSAFHPVQ 565          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0022276 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A061FNK0_THECC3.148e-4236.64Pseudo response regulator, putative isoform 5 OS=T... [more]
A0A061FMB9_THECC7.152e-4236.79Pseudo response regulator, putative isoform 7 (Fra... [more]
A0A061FP64_THECC8.556e-4236.79Pseudo response regulator, putative isoform 4 OS=T... [more]
A0A061FMB4_THECC1.500e-4136.79Pseudo response regulator, putative isoform 2 OS=T... [more]
A0A061FNK5_THECC3.561e-3637.14Pseudo response regulator, putative isoform 10 (Fr... [more]
A0A061FP68_THECC1.218e-3537.14Pseudo response regulator, putative isoform 9 (Fra... [more]
A0A061FUI0_THECC1.282e-3537.14Pseudo response regulator, putative isoform 1 OS=T... [more]
A0A061FN15_THECC1.412e-3537.14Pseudo response regulator isoform 3 OS=Theobroma c... [more]
F2Y9F4_POPTN2.323e-3537.13Aprr7 (Fragment) OS=Populus tremula GN=aprr7 PE=4 ... [more]
B9HM08_POPTR2.600e-3538.06Uncharacterized protein OS=Populus trichocarpa GN=... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0022276 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
PRR37_ORYSI2.626e-2335.88Two-component response regulator-like PRR37 OS=Ory... [more]
PRR37_ORYSJ3.446e-2034.53Two-component response regulator-like PRR37 OS=Ory... [more]
PRR73_ORYSI5.114e-1732.78Two-component response regulator-like PRR73 OS=Ory... [more]
PRR73_ORYSJ6.141e-1732.78Two-component response regulator-like PRR73 OS=Ory... [more]
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Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0022276 ID=g.arboreum_cottongen_reftransV1_0022276; Name=g.arboreum_cottongen_reftransV1_0022276; organism=Gossypium arboreum; type=contig; length=1185bp
AGTTCATGGACAAAAAGGGCAGCTGAAGGTGAGAGTTCTCAGCCGATGTC
TTCCTTAAATCGATTTCCTGGTGCTCCCAATAGCACTTGTGCCCAGGTGG
TTCATGTGAAGCATGAAAAACGTAGGAGCCCATGGACATGTGTTACTCAG
AGAAAAGAATGCCAAGAACAGCATGAACAACTTCTTGATGCCACTGAGGG
AAAGGACTTAGAAGTAAGAGTTGAAAGCAATAATGAATGGCAATGTGGCA
ATCAATGCAAAAATTCACCTACTCACCTGGCAGAAGCAGCCTCTAAGACA
TTTGACAGGGGATGGTTTGAGCACCAGGATGAGAACATTACTGGCAAGGA
TCGAATCCCTGATATAATTGCCACATTACAACAAGCTGAATGTAGAGCAT
CTGATGCTCCAGGCGGCCCTTCTGATGTCCCACAACTTAAAGATGGAGCT
TGCCATGGATCTGAAGAAAAGCTATCCTTTGAACTGACTCTTAAGAGGTG
GCAAGGAGCATCAGATGGTAGAAATGCTGCAAATGATGGGCATAATGTTT
TGAGACATTCTGATTCATCAGCTTTCTCAAAATACAGTACTGCATCTTCA
GCTAAGCAGGCTCTCACAGGGAATGTAGGAAGCTGTTCTCCACTTGATCA
TAGTTCTGTCACAAAGAAGACTGAAATAATGTGCACTTTTCCATCACATT
CCAATGGTATTCTTTTGAATCAGTCATCAGTAGGAAGCAACAACAAAAAT
GATATGACTACTACTGCTAAATTTGTCGGCCCAAAGCCAAAAGCTTTGGT
TGACAAGTCTGGGTCCATTTCAACATTTAAATGCCTTCACTCTTCTTCCT
TCCAACCAATGCATGGATGTTGTATTTGTTCATCTCAGGAAGTGTCACCT
GAAACGGTTGGTCATGATACCTCGCTGAAGATCATGGCAATAACTGATAA
ACAATGTAGATCATCCAGTAGTGTAAATGGGAGTGCCTCCGGGAGCAACT
ATGGTAGCAATGGACATAATGGGAGTGAAACCGGTTTACGTGCTGAACAT
GCAGTCATGGAAGATGGCAATGGGACAGCGAGTGGGAGAAGTGGTGGTAG
TGGCGCAAATGAAGACCGGGTTGCACAGAGAGCGGCTGCCTTGACCAAAT
TTCGCCAGAAAAGGAAAGAAAGATGTTTTGAAAAG
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