g.arboreum_cottongen_reftransV1_0006389, g.arboreum_cottongen_reftransV1_0006389 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0006389
Unique Nameg.arboreum_cottongen_reftransV1_0006389
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length2025
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr8chromosomeg.arboreum_cottongen_reftransV1_0006389:7..2025 .
Chr8:94194797..94198598 +
Homology
BLAST of g.arboreum_cottongen_reftransV1_0006389 vs. ExPASy TrEMBL
Match: A0A0D2PLC1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G034600 PE=4 SV=1)

HSP 1 Score: 820.076 bits (2117), Expect = 0.000e+0
Identity = 440/579 (75.99%), Postives = 479/579 (82.73%), Query Frame = -2
Query:  291 LLEERRCSLEEWMTKLLSDIDLSRSVTVASFLELEAAARSAFQEVNKCSSEPNVAGNSTISSNEIHPSSNTSHIAGCSSVTSDYGSDTAYETSELGTPRLGRDDSSEIGSGDLTLDEDLTGSIEKIVKYGISNIDEGLFMGQAILEQLEDFPRHRTLAINMNSTSGNDIYNGNGSRASFVAGNGLELFSELEPAKVAGHARKLSTESFGSDVSFLRGGDMSICGIPNSSVNGFVDLPGTSEVLNTMGSLGNSDPQSSGDTKIVLPLDQRHKMNRVLLTMQRKLATAKTDMEDLVARLNQEIAVKGYLTTKVKDLEVELESTKQKSKETLQQAILIERERFTQMQWEMEELRQKSLEMELKLNPNQDEKQITETTNQLAEEEKDAMLQELNATKEQLNSISKRYEELELKSKADIKVLVKEVKSLRKSQKELKQEVGQSLSEKAEAEVQLVQERQIIKHVRNAREKLLNKCRLLHNHLLECSVNLS-TDDENLIKDSSFVQEALDLLTTSDNXXXXXXXXXXXXXXXEGSATGNDDIQLNNHYNSRTDDELRKIIAGIFTENANLKKEVNSHLRHKLKCD 2024
            LLEERR SLEEWMTKLLSD DLSRSVTVASFLELEAAARSAFQEVNKCSSEPNVAGNSTISSNEIHPSSNTSHIAGCSSVTSDYGSDTAYETSELG+PRLGR++SS+IG GDLTLDEDL+GSIE  VKYG+SNIDEGL MGQ ILEQLEDFPRH+T   N+N T   D YNGNGSRASF   +GLELFSE EPAK AGHARKLSTES GSDV+ LR                                    D Q SG T+IVLPLDQRHKMNR LLTMQ+ L TAKTDMEDL+ARLNQEIAVKGYLTTKVKDLEVELESTKQKSKE LQQA+LIERERFTQMQWEM ELR+K LEMEL LNP QDE QITETTN  A +E+DAMLQELNA+KEQLN ISK+YEELE KSKA+IKVLVKEVKSLRKS+KELKQEV QSLS+ +E EVQL  ERQI KHVR AREKLLN+C+LLHN LLEC+VNLS  DDENLIKDSS V+EALDLLT SD+KI +LL E QLLAKE+ SA G+ D   +NHY++R DDELRKIIA IFT+NA L+K+VNS L+H+LKCD
Sbjct:  112 LLEERRYSLEEWMTKLLSDFDLSRSVTVASFLELEAAARSAFQEVNKCSSEPNVAGNSTISSNEIHPSSNTSHIAGCSSVTSDYGSDTAYETSELGSPRLGRENSSDIGLGDLTLDEDLSGSIENFVKYGMSNIDEGLSMGQTILEQLEDFPRHKTHNRNINKTLEKDTYNGNGSRASFHGTDGLELFSEPEPAKAAGHARKLSTESVGSDVTSLR------------------------------------DLQFSGATQIVLPLDQRHKMNRFLLTMQQGLFTAKTDMEDLIARLNQEIAVKGYLTTKVKDLEVELESTKQKSKENLQQALLIERERFTQMQWEMAELRRKLLEMELNLNPKQDEMQITETTNHSAAKEEDAMLQELNASKEQLNIISKQYEELETKSKAEIKVLVKEVKSLRKSEKELKQEVDQSLSKISEVEVQLEHERQISKHVRTAREKLLNECQLLHNRLLECNVNLSIVDDENLIKDSSLVEEALDLLTKSDDKITVLLAEVQLLAKEDSSAIGDTDNVHDNHYDNRIDDELRKIIADIFTDNAKLRKQVNSQLQHRLKCD 654          
BLAST of g.arboreum_cottongen_reftransV1_0006389 vs. ExPASy TrEMBL
Match: B9IKY7_POPTR (Phox domain-containing family protein OS=Populus trichocarpa GN=POPTR_0018s01880g PE=4 SV=1)

HSP 1 Score: 673.315 bits (1736), Expect = 0.000e+0
Identity = 359/576 (62.33%), Postives = 447/576 (77.60%), Query Frame = -2
Query:  297 LLEERRCSLEEWMTKLLSDIDLSRSVTVASFLELEAAARSAFQEVNKCSSEPNVAGNSTISSNEIHPSSNTSHIAGCSSVTSDYGSDTAYETSELGTPRLGRDDSSEIGSGDLTLDEDLTGSIEKIVKYGISNIDEGLFMGQAILEQLEDFPRHRTLAINMNSTSGNDIYNGNGSRASFVAGNGLELFSELEPAKVAGHARKLSTESFGSDVSFLRGGDMSICGIPNSSVNGFVDLPGTSEVLNTMGSLGNSDPQSSGDTKIVLPLDQRHKMNRVLLTMQRKLATAKTDMEDLVARLNQEIAVKGYLTTKVKDLEVELESTKQKSKETLQQAILIERERFTQMQWEMEELRQKSLEMELKLNPNQDEKQITETTNQLAEEEKDAMLQELNATKEQLNSISKRYEELELKSKADIKVLVKEVKSLRKSQKELKQEVGQSLSEKAEAEVQLVQERQIIKHVRNAREKLLNKCRLLHNHLLECSVNLSTDDENLIKDSSFVQEALDLLTTSDNXXXXXXXXXXXXXXXEGSATGNDDIQLNNHYNSRTDDELRKIIAGIFTENANLKKEVNSHLRHKLK 2024
            LLEERR SLE+WMTKLLSDIDLSRSV+VASFLELEAAARS+FQ+VN+ SSE +  G+S+ SS +I P  N S +A  SS+ SDYGSDTAYETS+LGTPRL RD++  IG GDL LDEDLT  +EK+VKYG+SNIDEGLFMGQ ILEQLE  PRHR   +++ + +  D+YNGN S+ASF  GNG+ELFSE  PAK  GH RKLS+ES GSD S LRG ++S  GIPNSS +G +DLPG +EVL++   +GN++ Q SGD  IVLP+DQRHKMNRVLLTMQR+L TAKTDMEDL++RLNQEIAVK YLTTKVKDLEVELE+ KQK+KE +QQAILIERER TQMQW+MEELR+KSLEMELKL   + E+  TE      + EKD +L+EL+AT++ L  +SKRYEELE KSKADIK L KE KSL+ SQ  LKQE+ QSL EK+E E  L +ER++ +H + AR+KLL+ CR+L + L EC+VNL ++D+N + D S   +ALDLLTTSD++I  LL EAQ L +++     +D+++        TDDELR ++A +FT+NA L+K+VNS +R  LK
Sbjct:  127 LLEERRYSLEQWMTKLLSDIDLSRSVSVASFLELEAAARSSFQDVNQQSSEASPTGDSSTSSLQIPP--NLSSLATGSSIASDYGSDTAYETSDLGTPRLERDENFGIGLGDLALDEDLTSPMEKLVKYGMSNIDEGLFMGQTILEQLEGLPRHRPHGVHIKNVTAKDVYNGNASKASFFPGNGMELFSEPGPAKAYGHVRKLSSESVGSDGSSLRGSELSNAGIPNSSGDGSLDLPGIAEVLSSAEVVGNAELQFSGDAHIVLPMDQRHKMNRVLLTMQRRLVTAKTDMEDLISRLNQEIAVKDYLTTKVKDLEVELETNKQKNKENMQQAILIERERLTQMQWDMEELRRKSLEMELKLKSKEGEQSSTEFQMASTDHEKDMVLEELDATRKLLEDLSKRYEELEAKSKADIKFLAKEFKSLKNSQTTLKQELSQSLKEKSEVEKLLHEEREMKEHGKIARKKLLHDCRILCDQLQECNVNLLSEDDNFVVDFSLA-DALDLLTTSDDQIGHLLTEAQQLFEDDKITAPDDNLR-------STDDELRNMLANLFTDNAMLRKQVNSTMRRALK 692          
BLAST of g.arboreum_cottongen_reftransV1_0006389 vs. ExPASy TrEMBL
Match: M5XK93_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002294mg PE=4 SV=1)

HSP 1 Score: 665.226 bits (1715), Expect = 0.000e+0
Identity = 365/578 (63.15%), Postives = 436/578 (75.43%), Query Frame = -2
Query:  291 LLEERRCSLEEWMTKLLSDIDLSRSVTVASFLELEAAARSAFQEVNKCSSEPNVAGNSTISSNEIHPSSNTSHIAGCSSVTSDYGSDTAYETSELGTPRLGRDDSSEIGSGDLTLDEDLTGSIEKIVKYGISNIDEGLFMGQAILEQLEDFPRHRTLAINMNSTSGNDIYNGNGSRASFVAGNGLELFSELEPAKVAGHARKLSTESFGSDVSFLRGGDMSICGIPNSSVNGFVDLPGTSEVLNTMGSLGNSDPQSSGDTKIVLPLDQRHKMNRVLLTMQRKLATAKTDMEDLVARLNQEIAVKGYLTTKVKDLEVELESTKQKSKETLQQAILIERERFTQMQWEMEELRQKSLEMELKLNPNQDEKQITETTNQLAEEEKDAMLQELNATKEQLNSISKRYEELELKSKADIKVLVKEVKSLRKSQKELKQEVGQSLSEKAEAEVQLVQERQIIKHVRNAREKLLNKCRLLHNHLLECSVNLSTDDENLIKDSSFVQEALDLLTTSDNXXXXXXXXXXXXXXXEGSATGNDDIQLNNHYNSRTDDELRKIIAGIFTENANLKKEVNSHLRHKLKCD 2024
            LLEERRCSLE WMTKLLSDID+SRSV VASFLELE+AARS+FQ+ ++ SSE        ++S +  P+S    I G SS+ SDYGSDTAYETSELGTPRL RDDSSEIG  DL LDEDLT  IEK+VKYG++NIDEGLFMGQ ILEQLE  P+H+  A N+N+  G D YNGN S+ S  A NG+ELFS  E +KV GH+RKLS ES GSDVS  RG +MS  G+PNSS +G  DL G +EV +    LGN++ Q+SG T++VLPLDQRHK++RVLLTMQR+L TAKTDMEDL+ARLNQEIAVK YLTTKVKDLEVELE+T+QKSKE LQQAILIERERFT+MQW+MEELR+KSLEMELKL   QD K   +TT     +EKD M QEL+  KEQL ++SKRYEELE KSKADIKVLVKEVK LR SQKELK E+ +SL EK+EAE  L QE+Q  K    AR++LL+ CR+LH  L EC++N         +D S + EA DLL TSDN+I LLL E QLLA++ G+ T   ++         TDDELRK++A IF+ENA+L+K+VNS +R   K D
Sbjct:  126 LLEERRCSLEAWMTKLLSDIDISRSVAVASFLELESAARSSFQDASQNSSE--------VNSLQSPPNSALPVIVGSSSIASDYGSDTAYETSELGTPRLARDDSSEIGIEDLLLDEDLTSPIEKLVKYGMANIDEGLFMGQTILEQLEGLPKHKVHARNVNNVIGKDTYNGNASKTSIQARNGMELFSAPEHSKVFGHSRKLSNESVGSDVSSQRGSEMSNSGVPNSSGDGSFDLVGGAEVSSITEILGNAELQTSGGTQVVLPLDQRHKLSRVLLTMQRRLVTAKTDMEDLIARLNQEIAVKDYLTTKVKDLEVELETTRQKSKENLQQAILIERERFTKMQWDMEELRRKSLEMELKLKSEQDNKSCADTTKDSTVQEKDIMPQELDPYKEQLENLSKRYEELEAKSKADIKVLVKEVKFLRSSQKELKYELSKSLKEKSEAEKLLQQEKQTSKLGETARKRLLHDCRILHKQLEECNINFP-------EDPSMLPEASDLLATSDNRISLLLSEVQLLAQDNGATTDVGEVDNFVDDTRTTDDELRKMLADIFSENASLRKQVNSVIRQACKMD 688          
BLAST of g.arboreum_cottongen_reftransV1_0006389 vs. ExPASy TrEMBL
Match: V4TSX6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10007589mg PE=4 SV=1)

HSP 1 Score: 662.144 bits (1707), Expect = 0.000e+0
Identity = 368/578 (63.67%), Postives = 452/578 (78.20%), Query Frame = -2
Query:  300 LLEERRCSLEEWMTKLLSDIDLSRSVTVASFLELEAAARSAFQEVNKCSSEPNVAGNSTISSNEIHPSSNTSHIAGCSSVTSDYGSDTAYETSELGTPRLGRDDSSEIGSGDLTLDEDLTGSIEKIVKYGISNIDEGLFMGQAILEQLEDFPRHRTLAI-NMNSTSGNDIYNGNGSRASFVAGNGLELFSELEPAKVAGHARKLSTESFGSDVSFLRGGDMSICGIPNSSVNGFVDLPGTSEVLNTMGSLGNSDPQSSGDTKIVLPLDQRHKMNRVLLTMQRKLATAKTDMEDLVARLNQEIAVKGYLTTKVKDLEVELESTKQKSKETLQQAILIERERFTQMQWEMEELRQKSLEMELKLNPNQDEKQITETTNQLAEEEKDAMLQELNATKEQLNSISKRYEELELKSKADIKVLVKEVKSLRKSQKELKQEVGQSLSEKAEAEVQLVQERQIIKHVRNAREKLLNKCRLLHNHLLECSVNLSTDDE-NLIKDSSFVQEALDLLTTSDNXXXXXXXXXXXXXXXEGSATGND-DIQLNNHYNSRTDDELRKIIAGIFTENANLKKEVNSHLRHKL 2024
            LLEERRCSLEEWMTKLLSDIDLSRSV+VASFLELEAAARS+FQ+VN+ +SE N + NSTISS ++ PS +   + G SSVTSDYGSDTAYETSELGTP+LGRD+ SEIG  DLTLDEDLT  IE +VKYG+SNIDEGLFMGQ ILEQLE FPRH+  A  + N+ +G ++ NGN S+A F++GNG++LFSE EP KV GHARKLS +S  SD S +RG ++S  GIPNSS +G  DL   +EV ++   LGNSD Q SGD ++V+PLDQRHK++RVLLTM+R+L TAKTDMEDL+ RLNQE+ VK YL TKVKDLEVELE+TKQKSKETLQQAIL ERER TQMQW+MEELRQKSLEME KL   QD     E+  +   ++K+ +LQEL+ATKEQL ++SKRYEELE KSKADIKVLVKEVKSLR SQ  LKQE+ Q L+EK++ E  L QERQI  H++  REKLL++CR+L N    C+ NL  ++E N+I +SS   +AL LLT+SD++I LL+ EAQLLA++  +A   D +   +N   +RTD+ELR++IA I  +NA L+K+VNS LR  L
Sbjct:  127 LLEERRCSLEEWMTKLLSDIDLSRSVSVASFLELEAAARSSFQDVNQNASEANPSSNSTISSLQM-PSDSGFTLIGSSSVTSDYGSDTAYETSELGTPKLGRDNGSEIGVEDLTLDEDLTSPIENLVKYGMSNIDEGLFMGQTILEQLEGFPRHKAHAQQHPNNATGKNVNNGNVSKALFLSGNGMDLFSEPEPGKVIGHARKLSADSVRSDASSIRGSEISNFGIPNSSADGSPDLHRCAEVSSSREILGNSDLQFSGDAELVIPLDQRHKLSRVLLTMERRLVTAKTDMEDLITRLNQEMTVKDYLMTKVKDLEVELETTKQKSKETLQQAILSERERLTQMQWDMEELRQKSLEMEWKLKSKQDGNPHAESMEESTVKDKN-VLQELDATKEQLENLSKRYEELEAKSKADIKVLVKEVKSLRSSQIGLKQELSQMLNEKSKTEELLQQERQIHNHMKTVREKLLHECRILLNRFQACNANLYAEEEDNVILESSSAADALALLTSSDDQISLLITEAQLLAEDSKAAASADVEKAHDNDVCTRTDNELREVIADILVDNAKLRKQVNSVLRRAL 702          
BLAST of g.arboreum_cottongen_reftransV1_0006389 vs. ExPASy TrEMBL
Match: A0A067F331_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g004913mg PE=4 SV=1)

HSP 1 Score: 655.596 bits (1690), Expect = 0.000e+0
Identity = 365/578 (63.15%), Postives = 449/578 (77.68%), Query Frame = -2
Query:  300 LLEERRCSLEEWMTKLLSDIDLSRSVTVASFLELEAAARSAFQEVNKCSSEPNVAGNSTISSNEIHPSSNTSHIAGCSSVTSDYGSDTAYETSELGTPRLGRDDSSEIGSGDLTLDEDLTGSIEKIVKYGISNIDEGLFMGQAILEQLEDFPRHRTLAI-NMNSTSGNDIYNGNGSRASFVAGNGLELFSELEPAKVAGHARKLSTESFGSDVSFLRGGDMSICGIPNSSVNGFVDLPGTSEVLNTMGSLGNSDPQSSGDTKIVLPLDQRHKMNRVLLTMQRKLATAKTDMEDLVARLNQEIAVKGYLTTKVKDLEVELESTKQKSKETLQQAILIERERFTQMQWEMEELRQKSLEMELKLNPNQDEKQITETTNQLAEEEKDAMLQELNATKEQLNSISKRYEELELKSKADIKVLVKEVKSLRKSQKELKQEVGQSLSEKAEAEVQLVQERQIIKHVRNAREKLLNKCRLLHNHLLECSVNLSTDDE-NLIKDSSFVQEALDLLTTSDNXXXXXXXXXXXXXXXEGSATGND-DIQLNNHYNSRTDDELRKIIAGIFTENANLKKEVNSHLRHKL 2024
            LLEERRCSLEEWMTKLLSDIDLSRSV+VASFLELEAAARS+FQ+VN+ +SE N + NSTISS ++ PS +   + G SSVTSDYGSDTAYETSELGTP+LGRD+ SEIG  DLTLDEDLT  IE +VKYG+SNIDEGLFMGQ ILEQLE FPRH+  A  + N+ +G ++ NGN S+A F++GNG++LFSE EP KV GHARKLS +S  SD S +RG ++S  GIPNSS +G   L   +EV ++   LGNSD Q SGD ++V+PLDQRHK++RVLLTM+R+L TAKTDMEDL+ RLNQE+ VK YL TKVKDLEVELE+TKQKSKETLQQAIL ERER TQMQW+MEELRQKSLEME KL   QD     E+  +   ++K+ +LQEL+ATKEQL ++SKRYEELE KSKADIKVLVKEVK LR SQ  LKQE+ Q L+EK++ E  L QERQ   H++  REKLL++CR+L N    C+ NL  ++E N+I +SS   +AL LLT+SD++I LL+ EAQLLA++  +A   D +   +N   +RTD+ELR++IA I  +NA L+K+VNS LR  L
Sbjct:  127 LLEERRCSLEEWMTKLLSDIDLSRSVSVASFLELEAAARSSFQDVNQNASEANPSSNSTISSLQM-PSDSGFTLIGSSSVTSDYGSDTAYETSELGTPKLGRDNGSEIGVEDLTLDEDLTSPIENLVKYGMSNIDEGLFMGQTILEQLEGFPRHKAHAQQHPNNATGKNVNNGNVSKALFLSGNGMDLFSEPEPGKVIGHARKLSADSVRSDASSIRGSEISNFGIPNSSADGSPGLHRCAEVSSSREILGNSDLQFSGDAELVIPLDQRHKLSRVLLTMERRLVTAKTDMEDLITRLNQEMTVKDYLMTKVKDLEVELETTKQKSKETLQQAILSERERLTQMQWDMEELRQKSLEMEWKLKSKQDGNPHAESMEESTVKDKN-VLQELDATKEQLENLSKRYEELEAKSKADIKVLVKEVKFLRSSQIGLKQELSQMLNEKSKTEELLQQERQTHNHMKTVREKLLHECRILLNRFQACNANLYAEEEDNVILESSSAADALALLTSSDDQISLLITEAQLLAEDSKAAASADVEKAHDNDVCTRTDNELREVIADILVDNAKLRKQVNSVLRRAL 702          
BLAST of g.arboreum_cottongen_reftransV1_0006389 vs. ExPASy TrEMBL
Match: B9RP25_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0923590 PE=4 SV=1)

HSP 1 Score: 650.203 bits (1676), Expect = 0.000e+0
Identity = 356/579 (61.49%), Postives = 434/579 (74.96%), Query Frame = -2
Query:  288 LLEERRCSLEEWMTKLLSDIDLSRSVTVASFLELEAAARSAFQEVNKCSSEPNVAGNSTISSNEIHPSSNTSHIAGCSSVTSDYGSDTAYETSELGTPRLGRDDSSEIGSGDLTLDEDLTGSIEKIVKYGISNIDEGLFMGQAILEQLEDFPRHRTLAINMNSTSGNDIYNGNGSRASFVAGNGLELFSELEPAKVAGHARKLSTESFGSDVSFLRGGDMSICGIPNSSVNGFVDLPGTSEVLNTMGSLGNSDPQSSGDTKIVLPLDQRHKMNRVLLTMQRKLATAKTDMEDLVARLNQEIAVKGYLTTKVKDLEVELESTKQKSKETLQQAILIERERFTQMQWEMEELRQKSLEMELKLNPNQDEKQITETTNQLAEEEKDAMLQELNATKEQLNSISKRYEELELKSKADIKVLVKEVKSLRKSQKELKQEVGQSLSEKAEAEVQLVQERQIIKHVRNAREKLLNKCRLLHNHLLECSVNLSTDDENLIKDSSFVQEALDLLTTSDNXXXXXXXXXXXXXXXEGSATGNDDIQLNNHYNSRTDDELRKIIAGIFTENANLKKEVNSHLRHKLKCDN 2024
            LLEERRCSLEEWMTKLLSDIDLSRS+ VASFLELEAAARS+FQ+VN+  SE + A +   SS +I  +S +S   G SSVTSDYGSDTAYETSELGTPRLGRD+  ++G  DLTLDEDLT  IEK+VKYG+SNIDEGLFMGQ ILEQLE  PRH+  A +MN+ +G D YNGN SR SF A NG+ELFSE EP KV GH RKLS+ES GSD S LRG ++S  G PN S +G +DLPG  +V +  G LG+++ Q SGD +I+LP DQR KMNR LLTMQR+L TAKTDMEDL+ARL+QEIAVK YLTTKVKDLE ELE+TKQK+KE LQQAILIERER TQMQW+MEELR+KS EMELKL   +D+    E      + EKD  LQEL+ATK+QL ++SK+YEELE KSKADIK L KE K+L+ SQ  LK+E+ QS+ EK E E  L +ER++  H +NAR+KLL  CR L N L EC++NLS+++E+     S + +ALDLL+TSD++I LLL EAQ L +++  A  +DD+Q           EL+K++A I T+N  L+K VNS +R  L   N
Sbjct:  126 LLEERRCSLEEWMTKLLSDIDLSRSMAVASFLELEAAARSSFQDVNQQLSEASPAADRATSSLQIPLNSTSSLNVGSSSVTSDYGSDTAYETSELGTPRLGRDEQCDVGIEDLTLDEDLTNPIEKLVKYGMSNIDEGLFMGQTILEQLEGLPRHKPHATHMNNVTGKDTYNGNASRISFPASNGMELFSETEPGKVFGHGRKLSSESVGSDGSSLRGSEISNSGTPNLSGDGSLDLPGGVDVSSVAGILGSAELQFSGDAQIILPSDQRQKMNRALLTMQRRLVTAKTDMEDLIARLHQEIAVKDYLTTKVKDLEAELETTKQKNKENLQQAILIERERLTQMQWDMEELRRKSFEMELKLKSKEDDNSSRELKMGSTDLEKDMALQELDATKKQLQNLSKQYEELEAKSKADIKFLAKEFKTLKSSQAVLKEELSQSVREKYEVEKLLQEEREMRMHEKNARKKLLYDCRTLCNRLKECNLNLSSEEEDEFIVESSLADALDLLSTSDDQIALLLAEAQGLFEDDKIAASDDDMQ-----------ELQKMLANIITDNVKLRKRVNSVMRCALHTGN 693          
BLAST of g.arboreum_cottongen_reftransV1_0006389 vs. ExPASy TrEMBL
Match: A0A067KBQ1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07148 PE=4 SV=1)

HSP 1 Score: 642.499 bits (1656), Expect = 0.000e+0
Identity = 352/582 (60.48%), Postives = 432/582 (74.23%), Query Frame = -2
Query:  288 LLEERRCSLEEWMTKLLSDIDLSRSVTVASFLELEAAARSAFQEVNKCSSEPNVAGNSTISSNEIHPSSNTSHIAGCSSVTSDYGSDTAYETSELGTPRLGRDDSSEIGSGDLTLDEDLTGSIEKIVKYGISNIDEGLFMGQAILEQLEDFPRHRTLAINMNSTSGNDIYNGNGSRASFVAGNGLELFSELEPAKVAGHARKLSTESFGSDVSFLRGGDMSICGIPNSSVNGFVDLPGTSEVLNTMGSLGNSDPQSSGDTKIVLPLDQRHKMNRVLLTMQRKLATAKTDMEDLVARLNQEIAVKGYLTTKVKDLEVELESTKQKSKETLQQAILIERERFTQMQWEMEELRQKSLEMELKLNPNQDEKQITETTNQLAEEEKDAMLQELNATKEQLNSISKRYEELELKSKADIKVLVKEVKSLRKSQKELKQEVGQSLSEKAEAEVQLVQERQIIKHVRNAREKLLNKCRLLHNHLLECSVNL-STDDENLIKDSSFVQEALDLLTTSDNXX--XXXXXXXXXXXXXEGSATGNDDIQLNNHYNSRTDDELRKIIAGIFTENANLKKEVNSHLRHKLKCDN 2024
            LLEERRC LEEWMTKLLSDIDLSRS+ VASFLELEAAARS+FQ+ N+  SE   A +ST+SS +  P S TS + G SSV SDYGSDT YETSELGTPRLGR++  E+G  DLTL+EDLT  IEK VKYG+SNIDEGLFMGQ ILEQLE FPRH+     +N+    D Y+GN S+ASF+AGNG+ELF+E E  KV GH RKLS+ES GSD S LRG ++S  G+PNS  +G +D+ G +EVL   G LG+++ Q +GD  +VLP+DQR+KMNR LLTMQR+L TAKTDMEDL+ARLNQE AVKGYL TKVKDLE ELE+TKQ++KE LQQAILIERER TQMQW+M+ELR+KSLEMELKL   +DE   TE     ++E+KD  LQEL+AT++QL S+SK+YEELE KSKADIK L KE KSL+ SQ ELKQE+ QSL EK+E E  L +ER+I    RNAR+KLL  C  + N L +C+  L S +D+  I +SS V +ALDLL+ SD++I  +L   +A  +  +  +A  +DD          TD +LR I+A +FT+NANL+K VNS LR  L   N
Sbjct:  127 LLEERRCLLEEWMTKLLSDIDLSRSMAVASFLELEAAARSSFQDANQQLSEAGPAVDSTLSSLQTPPHSTTSAVVGSSSVASDYGSDTVYETSELGTPRLGRNEHFELGVEDLTLEEDLTNPIEKFVKYGMSNIDEGLFMGQTILEQLEGFPRHKRHDTQVNNAIVKDTYDGNASKASFLAGNGMELFNEPEHGKVFGHTRKLSSESVGSDGSSLRGSELSNSGMPNSYGDGSLDVTGGTEVLGMAGILGSTELQFTGDAHVVLPVDQRNKMNRSLLTMQRRLVTAKTDMEDLIARLNQETAVKGYLATKVKDLEAELETTKQRNKENLQQAILIERERLTQMQWDMQELRRKSLEMELKLKSKEDENSSTELKMGSSDEDKDVALQELDATRKQLESLSKQYEELEAKSKADIKFLAKEFKSLKNSQAELKQELSQSLKEKSEVEKFLQEEREISTRERNARKKLLEDCNNICNLLQQCNSYLPSKEDDKSIMESS-VADALDLLSRSDDQIGLLLAEAQALFVDDKITAAVKDDDTWA-------TDQDLRNILANVFTDNANLRKRVNSILRKALHTGN 700          
BLAST of g.arboreum_cottongen_reftransV1_0006389 vs. ExPASy TrEMBL
Match: F6H3H8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g05630 PE=4 SV=1)

HSP 1 Score: 636.721 bits (1641), Expect = 0.000e+0
Identity = 360/584 (61.64%), Postives = 447/584 (76.54%), Query Frame = -2
Query:  291 LLEERRCSLEEWMTKLLSDIDLSRSVTVASFLELEAAARSAFQEVNKCSSEPNVAGNSTISSNEIHPSSNTSHIAGCSSVTSDYGSDTAYETSELGTPRLGRDDSSEIGSGDLTLDEDLTGSIEKIVKYGISNIDEGLFMGQAILEQLEDFPRHRTLAINMNSTSGNDIYNGNGSRASFVAGNGLELFSELEPAKVAGHARKLSTESFGSDVSFLRGGDMSICGIPNSSVNGFVDLPGTSEVLNTMGSLGNSDPQSSGDTKIVLPLDQRHKMNRVLLTMQRKLATAKTDMEDLVARLNQEIAVKGYLTTKVKDLEVELESTKQKSKETLQQAILIERERFTQMQWEMEELRQKSLEMELKLNPN--QDEKQITETTNQLAEEEKDAMLQELNATKEQLNSISKRYEELELKSKADIKVLVKEVKSLRKSQKELKQEVGQSLSEKAEAEVQLVQERQIIKHVRNAREKLLNKCRLLHNHLLECSVNLSTDD-ENLIKDSSFVQEALDLLTTSDNXXXXXXXXXXXXXXXEGSATGNDDIQLNNHYN---SRTDDELRKIIAGIFTENANLKKEVNSHLRHKLKCD 2024
            LLE+RR SLEEWM KLLSDIDLSRS++VASFLELEAAAR++FQ+VN+  SE N +GN TISS + HP+S+ S +AG SS+TSDYGSDTAYETSELGTPRLG+D+SSE+   DL LDEDLT  IEK+VKYG+SNIDEGLF+GQ ILEQLE FPRH+T    +NS  G D  NGN S+A F+AG+ ++   E +  KV  H RKLS  S GSD S LRG +MS  GI NS  +G +DLPG  EV  T   L N +   SGDT+IVLPLDQRHKMNR+L+TMQ++L TAKTDMEDL+ARL+QE+AVKGYLTTKVKDLEVELE+TKQKSKE LQQ+ILIERER TQMQW+MEELR+K+ EMELKL     QD+K   E+T   +++EKD +L+EL+ATK+QL ++ K++E+LE+KSK+DIKVLVKEVKSLR SQ ++KQE+ +SL EK+E E  L QER+  +    AR KLL +C +LHN L ECS+N  ++D +N+  +SS + +ALDLLTTSDN+I  LL EA LLA++         I  N++ N   SR DDELRK++  IF ENA L+K+VNS +R  LK D
Sbjct:  126 LLEQRRRSLEEWMAKLLSDIDLSRSISVASFLELEAAARASFQDVNQQISEANPSGNGTISSLQHHPNSSLSVVAGSSSITSDYGSDTAYETSELGTPRLGKDNSSELDLDDLILDEDLTSPIEKLVKYGMSNIDEGLFVGQTILEQLEGFPRHKTHGRQVNSLIGKDTENGNASKAEFLAGDRMDFLPEADDGKVISHGRKLSAGSVGSDTSSLRGSEMSNSGIINSIGDGSLDLPGGVEVSRTTEILNNIELHFSGDTQIVLPLDQRHKMNRILMTMQQRLVTAKTDMEDLIARLHQEVAVKGYLTTKVKDLEVELETTKQKSKENLQQSILIERERVTQMQWDMEELRRKTFEMELKLKSKCEQDDKLYPESTKVSSDQEKDMLLEELDATKKQLENLLKQHEKLEMKSKSDIKVLVKEVKSLRSSQTQMKQELSRSLKEKSETEKLLQQERERSELENTARRKLLYECEILHNQLRECSLNFPSEDGDNVAMNSSPLSDALDLLTTSDNRIGRLLAEAPLLAQDNEYVVSG--INKNDNSNNDVSRIDDELRKVLKDIFLENARLRKQVNSVIRRSLKMD 707          
BLAST of g.arboreum_cottongen_reftransV1_0006389 vs. ExPASy TrEMBL
Match: B9HAF8_POPTR (Phox domain-containing family protein OS=Populus trichocarpa GN=POPTR_0006s27210g PE=4 SV=2)

HSP 1 Score: 627.861 bits (1618), Expect = 0.000e+0
Identity = 351/576 (60.94%), Postives = 434/576 (75.35%), Query Frame = -2
Query:  297 LLEERRCSLEEWMTKLLSDIDLSRSVTVASFLELEAAARSAFQEVNKCSSEPNVAGNSTISSNEIHPSSNTSHIAGCSSVTSDYGSDTAYETSELGTPRLGRDDSSEIGSGDLTLDEDLTGSIEKIVKYGISNIDEGLFMGQAILEQLEDFPRHRTLAINMNSTSGNDIYNGNGSRASFVAGNGLELFSELEPAKVAGHARKLSTESFGSDVSFLRGGDMSICGIPNSSVNGFVDLPGTSEVLNTMGSLGNSDPQSSGDTKIVLPLDQRHKMNRVLLTMQRKLATAKTDMEDLVARLNQEIAVKGYLTTKVKDLEVELESTKQKSKETLQQAILIERERFTQMQWEMEELRQKSLEMELKLNPNQDEKQITETTNQLAEEEKDAMLQELNATKEQLNSISKRYEELELKSKADIKVLVKEVKSLRKSQKELKQEVGQSLSEKAEAEVQLVQERQIIKHVRNAREKLLNKCRLLHNHLLECSVNLSTDDENLIKDSSFVQEALDLLTTSDNXXXXXXXXXXXXXXXEGSATGNDDIQLNNHYNSRTDDELRKIIAGIFTENANLKKEVNSHLRHKLK 2024
            LLEERR SLE+WMTKLLSDIDLSRSV VAS+ ELEAAARS+FQ+ N+ SSE +  G+ + SS +I P+ ++S     SS+ SDYGSDTAYETS+LGTP+L RD +  IG GDL LDEDLTG IEK+VKYG++NIDEGLFMGQ ILEQLED                   YNGN S+ SF+ GNG+EL+SE EP KV GH RKLS +S  SD S LRG ++S  GIPNSS +G++DLPG +E+ ++   LGN++ Q SGD  IVLPLDQRHKMNRVLLTMQR+L T KTDMEDLV+RLNQEIAVK YLTTKVKDLEVE E+TKQK+KET+QQAILIERER TQMQW+MEELR+KSLEMELKL   + E++ TE      + EKD  L+EL+AT++QL  +SKRYEELE KSKAD K L KE KSL+ SQ  LKQE+ QSL EK+E E  L +ER++ +H +  R+KLLN C +L++ L EC+ NLS++D N I +SS + +ALDLLTTSD++I  LL EAQLL +++ +   N D +        TDDELR+++A IFT+NA L+K+VNS +RH LK
Sbjct:  128 LLEERRYSLEQWMTKLLSDIDLSRSVAVASYFELEAAARSSFQDGNQQSSEASPTGDGSTSSLQIPPNLSSSLAT-SSSIASDYGSDTAYETSDLGTPKLARDGNFGIGLGDLALDEDLTGPIEKLVKYGMTNIDEGLFMGQTILEQLEDG------------------YNGNASKDSFLTGNGMELYSEPEPGKVFGHVRKLSCDSVESDGSSLRGSEISNSGIPNSSGDGYLDLPGVAEISSSTEILGNTEMQFSGDAHIVLPLDQRHKMNRVLLTMQRRLVTVKTDMEDLVSRLNQEIAVKDYLTTKVKDLEVEFETTKQKNKETMQQAILIERERLTQMQWDMEELRRKSLEMELKLKSKEGEQRSTEFQMAPTDHEKDIALEELDATRKQLEELSKRYEELEAKSKADFKFLAKEFKSLKSSQTTLKQELSQSLKEKSEVEKLLYEEREMKEHEKITRKKLLNDCSILYDQLQECNGNLSSED-NFIVNSS-LGDALDLLTTSDDQISHLLAEAQLLFEDDKTTAPNKDTRA-------TDDELREMLANIFTDNAKLRKQVNSIMRHALK 675          
BLAST of g.arboreum_cottongen_reftransV1_0006389 vs. ExPASy TrEMBL
Match: W9QL63_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_004509 PE=4 SV=1)

HSP 1 Score: 613.609 bits (1581), Expect = 0.000e+0
Identity = 344/586 (58.70%), Postives = 436/586 (74.40%), Query Frame = -2
Query:  291 LLEERRCSLEEWMTKLLSDIDLSRSVTVASFLELEAAARSAFQEVNKCSSEPNVAGNSTISSNEIHPSSNTSHIAGCSSVTSDYGSDTAYETSELGTPRLGRDDSSEIGSGDLTLDEDLTGSIEKIVKYGISNIDEGLFMGQAILEQLEDFPRHRTLAINMNSTSGNDIYNGNGSRASFVAGNGLELFSELEPAKVAGHARKLSTESFGSDVSFLRGGDMSICGIPNSSVNGFVDLPGTSEVLNTMGSLGNSDPQSSGDTKIVLPLDQRHKMNRVLLTMQRKLATAKTDMEDLVARLNQEIAVKGYLTTKVKDLEVELESTKQKSKETLQQAILIERERFTQMQWEMEELRQKSLEMELKL--NPNQDEKQITETTNQLAEEEKDAMLQELNATKEQLNSISKRYEELELKSKADIKVLVKEVKSLRKSQKELKQEVGQSLSEKAEAEVQLVQERQIIKHVRNAREKLLNKCRLLHNHLLECSVNLSTDDENLIK-DSSFVQEALDLLTTSDNXXXXXXXXXXXXXXXEGSATG--NDDIQLNNHYNSRTDDELRKIIAGIFTENAN---LKKEVNSHLRHKLKCD 2024
            LLEERRCSLEEWMTKLLSDID+SRSV VA+FLELEAAARS+FQ+VN  +SE N        S ++   S+   I G SS  SDYGSDTAYE SELGTPR+G DD+SE+G  DL LDEDLTG IEK+VKYG++NIDEGLFMGQ ILEQLE  PR++  A ++N+    D +NGN S+ S+++GNG++LFSE E  KV  HARKLS ES GSDVS LRG + S  GIPNSS NG +DL G +EV ++M  LGNS+  +SG  ++VLPLDQRHKM+R+LLTMQR+L TAKTDMEDL+ARLNQEIAVK YL TKVKDLEVELE+ +QKS+E LQQAILIERERFTQMQW+MEELRQKSLEMELKL    ++D    T++TN    +EKD +L+EL ++KEQL  +SK+YEELE +SKAD KVLVKEVKSLR SQ +L+ E+ +SL+EK+EAE  L QE+Q  K     ++KLL++C++L+N L EC+ N  T DE+ +    S   EALDLL TSD++I  LL  A+LL +E G++    ++D +  +   +  DDELR ++A IF +N +   +   V+ HL  + + +
Sbjct:  128 LLEERRCSLEEWMTKLLSDIDVSRSVAVATFLELEAAARSSFQDVNPQTSEAN--------SRDLPTQSSLPTIVGSSSAASDYGSDTAYEISELGTPRIGMDDNSELGIEDLALDEDLTGPIEKLVKYGMANIDEGLFMGQTILEQLEGLPRNKVRARHLNNVVVRDAHNGNSSKVSYLSGNGMDLFSEPEHGKVNAHARKLSNESVGSDVSSLRGSETSNFGIPNSSGNGSLDLLGGAEVSSSMEVLGNSELHTSGGAQLVLPLDQRHKMSRLLLTMQRRLVTAKTDMEDLIARLNQEIAVKDYLATKVKDLEVELETDRQKSRENLQQAILIERERFTQMQWDMEELRQKSLEMELKLKSKSDKDGDSCTKSTNNSTLQEKD-ILRELGSSKEQLEILSKQYEELEARSKADRKVLVKEVKSLRSSQAKLEHELSKSLTEKSEAEKLLEQEKQKSKQAEKTKKKLLHQCKILYNRLNECNRNSPTKDEDKVSLHPSSPGEALDLLKTSDDQINFLLNGAKLLTQENGASAPDLDEDHETMSEDAATADDELRNLLANIFIDNVSWVCITVLVDDHLLFRFRIE 704          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0006389 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0D2PLC1_GOSRA0.000e+075.99Uncharacterized protein OS=Gossypium raimondii GN=... [more]
B9IKY7_POPTR0.000e+062.33Phox domain-containing family protein OS=Populus t... [more]
M5XK93_PRUPE0.000e+063.15Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
V4TSX6_9ROSI0.000e+063.67Uncharacterized protein OS=Citrus clementina GN=CI... [more]
A0A067F331_CITSI0.000e+063.15Uncharacterized protein OS=Citrus sinensis GN=CISI... [more]
B9RP25_RICCO0.000e+061.49Putative uncharacterized protein OS=Ricinus commun... [more]
A0A067KBQ1_JATCU0.000e+060.48Uncharacterized protein OS=Jatropha curcas GN=JCGZ... [more]
F6H3H8_VITVI0.000e+061.64Putative uncharacterized protein OS=Vitis vinifera... [more]
B9HAF8_POPTR0.000e+060.94Phox domain-containing family protein OS=Populus t... [more]
W9QL63_9ROSA0.000e+058.70Uncharacterized protein OS=Morus notabilis GN=L484... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0006389 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 368..409
NoneNo IPR availableCOILSCoilCoilcoord: 414..448
NoneNo IPR availableCOILSCoilCoilcoord: 311..331
NoneNo IPR availablePANTHERPTHR10555:SF154SUBFAMILY NOT NAMEDcoord: 78..243
NoneNo IPR availablePANTHERPTHR10555:SF154SUBFAMILY NOT NAMEDcoord: 452..562
coord: 1..42
NoneNo IPR availablePANTHERPTHR10555SORTING NEXINcoord: 1..42
coord: 78..243
NoneNo IPR availablePANTHERPTHR10555SORTING NEXINcoord: 452..562

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0006389 ID=g.arboreum_cottongen_reftransV1_0006389; Name=g.arboreum_cottongen_reftransV1_0006389; organism=Gossypium arboreum; type=contig; length=2025bp
TTTTTTAACACATCAAACTTGGATGCTTTTGCTTTCATTTTTCTCCATTG
TTATTCAAAAGATAATATATAGAATACAGCAGTGTTATAAAAGGGCATCT
TCTCTGCATTAGCGGTATACATGTAACCCCAAAATTCGCAATGTAATTAA
TTACTGTGGGACTATAATGGAGATTGTGGGGGTTACCTTATCATAATCTA
AATGATAGAAAAATAACTACAATATTCAAACCCCATTGCATATTTTCTCA
AGACTTGGTTAACTCCTTATCATTATTCTTTGATATGATTATCACATTTC
AGTTTATGCCGTAGATGAGAATTTACCTCTTTTTTTAAGTTAGCATTCTC
GGTGAAAATGCCTGCTATGATCTTCCTTAACTCATCATCTGTTCTACTAT
TGTAGTGGTTGTTCAATTGGATATCATCATTGCCAGTGGCACTGCCTTCT
TCCTTGGCTAATAGTTGCGCCTCCTCAAGTAGGAGAATGATTTTATTATC
AGATGTAGTCAACAAATCCAGTGCTTCTTGAACAAAGGAAGAATCTTTGA
TTAAATTTTCATCATCTGTAGACAAATTCACACTGCATTCAAGAAGATGG
TTGTGAAGAAGCCGGCACTTGTTGAGCAGCTTTTCTCTAGCATTTCTTAC
ATGCTTAATTATTTGTCTTTCCTGTACTAGTTGTACCTCAGCTTCAGCTT
TTTCTGATAGTGACTGACCAACCTCCTGCTTCAGTTCCTTTTGGGATTTC
CTGAGAGACTTGACCTCTTTAACCAGAACTTTAATATCTGCTTTTGATTT
AAGCTCTAGCTCTTCATATCGCTTTGATATACTGTTCAGCTGTTCCTTAG
TAGCATTTAACTCTTGCAGCATTGCATCTTTCTCCTCTTCAGCCAATTGG
TTGGTTGTCTCTGTTATTTGCTTCTCATCCTGATTAGGATTCAACTTCAA
CTCCATTTCCAATGATTTCTGCCGAAGTTCTTCCATCTCCCACTGCATTT
GCGTAAACCTTTCCCTCTCAATCAGGATAGCTTGCTGCAGGGTTTCTTTA
CTTTTTTGTTTGGTGCTTTCAAGTTCCACTTCCAAATCCTTAACCTTTGT
GGTAAGATAACCTTTCACTGCTATTTCTTGATTTAATCTGGCTACAAGAT
CCTCCATGTCAGTTTTTGCAGTGGCTAGTTTCCGCTGCATGGTTAAAAGA
ACCCTATTCATCTTATGACGCTGATCCAATGGAAGAACAATTTTTGTATC
TCCAGAAGACTGAGGATCTGAGTTTCCAAGACTTCCCATTGTATTTAATA
CTTCGGAAGTTCCAGGAAGGTCAACAAAGCCATTAACAGATGAATTTGGA
ATCCCACAAATGGACATATCACCACCTCTCAGAAAACTTACATCACTTCC
AAAACTTTCAGTTGATAACTTCCGAGCATGACCAGCCACTTTAGCCGGCT
CTAGCTCAGAAAAGAGTTCCAATCCATTACCAGCAACAAATGAAGCTCTG
GACCCGTTTCCATTATAAATATCATTCCCTGAAGTACTATTCATGTTTAT
GGCCAATGTTCTATGCCTAGGAAAATCTTCTAGCTGCTCCAAAATTGCCT
GTCCCATAAATAGTCCCTCATCAATATTTGATATACCATACTTCACAATT
TTTTCTATTGAACCTGTTAAATCTTCATCCAGTGTCAGATCTCCTGAACC
AATTTCAGAACTGTCATCTCTCCCTAACCTAGGTGTCCCAAGCTCAGATG
TCTCATAAGCAGTATCACTACCATAATCTGATGTCACTGATGAACAACCA
GCAATATGAGATGTGTTTGAACTGGGATGAATCTCATTTGATGAAATTGT
GCTATTTCCAGCAACATTCGGTTCTGAGGAGCATTTATTTACCTCTTGGA
ATGCAGATCTTGCAGCAGCTTCTAGTTCAAGAAAGGACGCAACTGTGACA
CTTCTCGACAAATCAATGTCAGATAACAGCTTTGTCATCCACTCCTCCAA
TGAACACCTTCTCTCTTCCAACAAA
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