g.arboreum_cottongen_reftransV1_0004644, g.arboreum_cottongen_reftransV1_0004644 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0004644 vs. ExPASy TrEMBL
Match: A0A0D2RCE5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G251500 PE=4 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 1.667e-34 Identity = 65/67 (97.01%), Postives = 65/67 (97.01%), Query Frame = 1 Query: 1 AVTNFEPSTYEGELISESENGDQNRVLDLNLGIAPPCTSNLQKENENSSNFPFQHSYDGLPVASGAR 201 AVTNFEPSTYEGELISESENGDQNRVLDLNLGIAPPCTSNLQKENENSSNFPFQ YDGLPVASGAR Sbjct: 293 AVTNFEPSTYEGELISESENGDQNRVLDLNLGIAPPCTSNLQKENENSSNFPFQRGYDGLPVASGAR 359
BLAST of g.arboreum_cottongen_reftransV1_0004644 vs. ExPASy TrEMBL
Match: A0A067K9U1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16454 PE=4 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 9.189e-33 Identity = 94/181 (51.93%), Postives = 114/181 (62.98%), Query Frame = 1 Query: 1 AVTNFEPSTYEGELISESENGDQNRVLDLNLGIAPPCTSNLQKENENSSNFPFQHSYDGLPVASGARFENSASATMRVQPSLGQATAFKHVPNWNVANPSFFPVYRERAIEKRIEVDSTP---WQIQGPYGGTKEMXXXXXXXXXXXXXXXXXXXXXXXXQLRVPNATFLQHHFPPVIMNP 534 AVTNFEPSTYEG++ISE+ NGD N+ LDLNLGIAPP S QK N F FQ S+DG + G NSASAT + + A + W + +FFP+ +ERAI+KR+EVDS P WQ QGPYGG + L+ +AASSGFS S IT PSAA+GQ PN+ L HF P P Sbjct: 269 AVTNFEPSTYEGQIISEANNGDGNQNLDLNLGIAPPDISESQKINREMDTFHFQSSWDGRSIDRGPLIINSASATFKDELPYDPPMAPEPPALWGGLDTNFFPICKERAIDKRMEVDSLPNWTWQSQGPYGGANPLPLYSTAASSGFSPSTITVPSAASGQFHFPNSAILHRHFSPFRHQP 449
BLAST of g.arboreum_cottongen_reftransV1_0004644 vs. ExPASy TrEMBL
Match: I1JPI9_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 1.389e-32 Identity = 90/193 (46.63%), Postives = 115/193 (59.59%), Query Frame = 1 Query: 1 AVTNFEPSTYEGELISESENGDQNRVLDLNLGIAPPCTSNLQKEN--ENSSNFPFQHSYDGLPVASGARFENSASATMRVQPS-LGQATAFKHVPN-WNVANPSFFPVYRERAIEKRIEVDSTP---WQIQGPYGGTKEMXXXXXXXXXXXXXXXXXXXXXXXXQLRVPNATFLQHHFPPVIMNPSTPH-FYC 555 AVTNFEPS YEGE+IS+S+N D + LDLNLG+APP S+ Q +N N S HS+D +P+ FE+SAS ++ VQPS G + A P+ WN +N FFP+Y E AIEKR+E P WQ++GPYGG P + ++ PSAA Q+R PN TFL HFPP I N T F+C Sbjct: 269 AVTNFEPSFYEGEVISQSDNEDNKQSLDLNLGLAPPSYSDGQIKNTPSNGSGMITPHSWDNIPLDKRVMFEHSASRSLTVQPSHHGFSVASGQHPSVWNGSN--FFPIYEETAIEKRMEAAPVPNWAWQVKGPYGGA--TLTPPLSTAASSGFPSTILPSAADTQIRFPNMTFLHSHFPPSITNSGTISPFFC 457
BLAST of g.arboreum_cottongen_reftransV1_0004644 vs. ExPASy TrEMBL
Match: V7D0N2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G174400g PE=4 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.862e-31 Identity = 87/186 (46.77%), Postives = 108/186 (58.06%), Query Frame = 1 Query: 1 AVTNFEPSTYEGELISESENGDQNRVLDLNLGIAPPCTSNLQKEN--ENSSNFPFQHSYDGLPVASGARFENSASATMRVQPSLGQATAFKHVPN-WNVANPSFFPVYRERAIEKRIEVDSTP---WQIQGPYGGTKEMXXXXXXXXXXXXXXXXXXXXXXXXQLRVPNATFLQHHFPPVIMNPST 540 AVTNFEPS YEGE+IS+S+N D + LDLNLGIAPP S+ Q +N N S +D PV FE+S S ++ VQPS G + H P+ WN +N FFP+Y E AIEK++E P WQ+QGPYGG P + ++ PSAA Q+ PN TFL HFPP I N ST Sbjct: 270 AVTNFEPSIYEGEVISQSDNEDGKQNLDLNLGIAPPSYSDSQIKNTPSNGSGLKTPPCWDDSPVEKRFMFEHSGSRSLNVQPSHGISRVSGHHPSTWNGSN--FFPIYEETAIEKKLEAGPMPSWAWQVQGPYGGAS--LTPPFSTAASSGFPSTIIPSAADTQIHFPNMTFLHSHFPPSITNSST 451
BLAST of g.arboreum_cottongen_reftransV1_0004644 vs. ExPASy TrEMBL
Match: G7L1P7_MEDTR (AP2 domain transcription factor OS=Medicago truncatula GN=MTR_7g100590 PE=4 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 3.132e-29 Identity = 84/194 (43.30%), Postives = 110/194 (56.70%), Query Frame = 1 Query: 1 AVTNFEPSTYEGELISESENGDQNRVLDLNLGIAPPCTSNLQKEN--ENSSNFPFQHSYDGLPVASGARFENSASATMRVQPSLGQATAFKHV-PNWNVANPSFFPVYRERAIEKRIEVDSTP---WQIQGPYGGTKEMXXXXXXXXXXXXXXXXXXXXXXXXQLRVPNATFLQHHFPPVIMNPS-TPHFYCRT 561 AVTNFE S+YEGEL S+++N D + LDLNLGIAPP S++Q N N S Q ++D +PV FE+S S ++ VQ S G A +H P W+ N +FPV +ERAIE R+E P WQ+Q PY + S +SS S +AA Q+ PN T+L HFP + N S P FYCR+ Sbjct: 283 AVTNFEASSYEGELTSQADNDDIKQNLDLNLGIAPPSNSDVQMMNMHHNGSGLQVQRNWDDMPVDKSVMFEDSGSRSLNVQSSYGFPIASEHQPPVWSGTN--YFPVCKERAIENRMESAPVPNWAWQLQSPYNNGSTL---ILPNFSAAASSGFPSTTAADSQIHFPNITYLHPHFPTPVTNSSPIPSFYCRS 471
BLAST of g.arboreum_cottongen_reftransV1_0004644 vs. ExPASy TrEMBL
Match: K7MYY3_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.673e-28 Identity = 86/193 (44.56%), Postives = 110/193 (56.99%), Query Frame = 1 Query: 1 AVTNFEPSTYEGELISESENGDQNRVLDLNLGIAPPCTSNLQKEN--ENSSNFPFQHSYDGLPVASGARFENSASATMRVQ-PSLGQATAFKHVPN-WNVANPSFFPVYRERAIEKRIEVDSTP---WQIQGPYGGTKEMXXXXXXXXXXXXXXXXXXXXXXXXQLRVPNATFLQHHFPPVIMNPST--PHFY 552 AVTNFEPS YEGE+IS+S+N D + LDLNLGIAPP S+ Q +N N S S+D +P+ FE+S S + +Q P G + A P+ WN +N FFP+Y E AIEKR+E P WQ+QGPYG + P + ++ PSAA Q+R PN TFL HFP I N T P F+ Sbjct: 298 AVTNFEPSLYEGEVISQSDNEDTKQSLDLNLGIAPPSYSDGQIKNTPSNGSGMIAPQSWDDIPLDKRVMFEHSGSRSRTIQPPHHGFSIASGQHPSVWNGSN--FFPIYEETAIEKRMEAAPVPNWAWQVQGPYG--RATLAPPFSTAASSGFPSTIIPSAADTQIRFPNMTFLHSHFPSSITNSGTISPFFF 486
BLAST of g.arboreum_cottongen_reftransV1_0004644 vs. ExPASy TrEMBL
Match: K7MYY2_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.955e-28 Identity = 86/193 (44.56%), Postives = 110/193 (56.99%), Query Frame = 1 Query: 1 AVTNFEPSTYEGELISESENGDQNRVLDLNLGIAPPCTSNLQKEN--ENSSNFPFQHSYDGLPVASGARFENSASATMRVQ-PSLGQATAFKHVPN-WNVANPSFFPVYRERAIEKRIEVDSTP---WQIQGPYGGTKEMXXXXXXXXXXXXXXXXXXXXXXXXQLRVPNATFLQHHFPPVIMNPST--PHFY 552 AVTNFEPS YEGE+IS+S+N D + LDLNLGIAPP S+ Q +N N S S+D +P+ FE+S S + +Q P G + A P+ WN +N FFP+Y E AIEKR+E P WQ+QGPYG + P + ++ PSAA Q+R PN TFL HFP I N T P F+ Sbjct: 304 AVTNFEPSLYEGEVISQSDNEDTKQSLDLNLGIAPPSYSDGQIKNTPSNGSGMIAPQSWDDIPLDKRVMFEHSGSRSRTIQPPHHGFSIASGQHPSVWNGSN--FFPIYEETAIEKRMEAAPVPNWAWQVQGPYG--RATLAPPFSTAASSGFPSTIIPSAADTQIRFPNMTFLHSHFPSSITNSGTISPFFF 492
BLAST of g.arboreum_cottongen_reftransV1_0004644 vs. ExPASy TrEMBL
Match: I1NA54_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.084e-28 Identity = 86/193 (44.56%), Postives = 110/193 (56.99%), Query Frame = 1 Query: 1 AVTNFEPSTYEGELISESENGDQNRVLDLNLGIAPPCTSNLQKEN--ENSSNFPFQHSYDGLPVASGARFENSASATMRVQ-PSLGQATAFKHVPN-WNVANPSFFPVYRERAIEKRIEVDSTP---WQIQGPYGGTKEMXXXXXXXXXXXXXXXXXXXXXXXXQLRVPNATFLQHHFPPVIMNPST--PHFY 552 AVTNFEPS YEGE+IS+S+N D + LDLNLGIAPP S+ Q +N N S S+D +P+ FE+S S + +Q P G + A P+ WN +N FFP+Y E AIEKR+E P WQ+QGPYG + P + ++ PSAA Q+R PN TFL HFP I N T P F+ Sbjct: 268 AVTNFEPSLYEGEVISQSDNEDTKQSLDLNLGIAPPSYSDGQIKNTPSNGSGMIAPQSWDDIPLDKRVMFEHSGSRSRTIQPPHHGFSIASGQHPSVWNGSN--FFPIYEETAIEKRMEAAPVPNWAWQVQGPYG--RATLAPPFSTAASSGFPSTIIPSAADTQIRFPNMTFLHSHFPSSITNSGTISPFFF 456
BLAST of g.arboreum_cottongen_reftransV1_0004644 vs. ExPASy TrEMBL
Match: D7TQA3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0040g03180 PE=4 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.939e-27 Identity = 88/202 (43.56%), Postives = 120/202 (59.41%), Query Frame = 1 Query: 1 AVTNFEPSTYEGELISESENGDQNRVLDLNL------GIAPPCT----SNLQKENENSSNFPFQHSYDGLPVASGARFENSASATMRVQPSLGQATAFKHVPNWNVANPSFFPVYRERAIEKRIEVDSTP---WQIQGPYGGTKEMXXXXXXXXXXXXXXXXXXXXXXXXQLRVPNATFLQHHFPPVIMNPS--TPHFYCRT 561 AVTNFEPSTYEGE+I ++NG ++ L+L G+AP + S+ N ++ P + +D +P G R ENS SAT+ V PS G A H P+W+ N FP+Y+ERAIEKRIEVD P WQ GPYGG LF +AASSGF SS+ T+ A Q + + T LQH++ P + N + +P++YCR+ Sbjct: 295 AVTNFEPSTYEGEIIFPADNGGSSQNLNLLPNLDLHLGVAPYFSDEPMSDEPVRNSKANGSPSRQGHDAMPDDRGERIENSTSATLGVHPSYGLVMASDHPPSWSGVNSRVFPIYKERAIEKRIEVDHLPNWAWQNHGPYGGATP-PLFSTAASSGFLSSVTTASPANPTQGSLQSTTVLQHYYSPSLTNTTSISPYYYCRS 495
BLAST of g.arboreum_cottongen_reftransV1_0004644 vs. ExPASy TrEMBL
Match: W9RE03_9ROSA (Floral homeotic protein APETALA 2 OS=Morus notabilis GN=L484_003848 PE=4 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.096e-22 Identity = 78/194 (40.21%), Postives = 100/194 (51.55%), Query Frame = 1 Query: 1 AVTNFEPSTYEGELISESENGDQNRVLDLNLGIAPPCTSNLQKENENSSNFPFQHSYDGLPVASGARFENSASATMRVQPSLGQATAFKHVPNWNVANPSFFPVYRERAIEKRIEVDSTP---WQIQG---PYGGTKEMXXXXXXXXXXXXXXXXXXXXXXXXQLRVPNATFLQHHFPPVIMNPST-PHFYCRT 561 AVTNFEP+ Y+ E++SE+E N+ LDLNLGIAP SN KEN +S F + V R EN ++A R + G A +H N SFFP ERA E+ ++VDS P WQIQG + +++ S+ SAA QL PN L HHFPP I N + PHFYCR+ Sbjct: 260 AVTNFEPALYDVEMMSEAECEGGNQNLDLNLGIAPLSLSNGPKENVETSGFYLEQ------VHMRERIENFSTA--RAKMPHGSRIASEHCSIIGGMNASFFPNDMERATERGVDVDSLPNWAWQIQGRAAAPPVPAPLFCTAASSGFPSPSATSLPSSAANSQLHFPNLPILHHHFPPSIANTTNLPHFYCRS 445 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0004644 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0004644 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 0
InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0004644 ID=g.arboreum_cottongen_reftransV1_0004644; Name=g.arboreum_cottongen_reftransV1_0004644; organism=Gossypium arboreum; type=contig; length=803bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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