g.arboreum_cottongen_reftransV1_0010846, g.arboreum_cottongen_reftransV1_0010846 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy TrEMBL
Match: D7LDK6_ARALL (Pentatricopeptide repeat-containing protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_482072 PE=4 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 6.535e-56 Identity = 96/121 (79.34%), Postives = 106/121 (87.60%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 LLSIY K+GR EEALDI REM G+++DVVTYNALLGGYGKQGKYDEV+ +F EMK + V PNLLTYST+ID YSKGGLY EAM+VFREFK AGL+ADVVLYSALIDALCKNGLV SAVS Sbjct: 450 LLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFKSAGLRADVVLYSALIDALCKNGLVGSAVS 570 HSP 2 Score: 91.2781 bits (225), Expect = 1.524e-18 Identity = 44/120 (36.67%), Postives = 78/120 (65.00%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQG-KYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L+S Y + G EEA+ + M++ G+R ++VTYNA++ GK G ++ +V FDEM+ V P+ +T+++++ V S+GGL++ A ++F E ++ DV Y+ L+DA+CK G ++ A Sbjct: 274 LISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNCVQPDRITFNSLLAVCSRGGLWEAARNLFDEMSNRRIEQDVFSYNTLLDAICKGGQMDLA 393 HSP 3 Score: 82.0333 bits (201), Expect = 2.388e-15 Identity = 39/114 (34.21%), Postives = 69/114 (60.53%), Query Frame = -1 Query: 22 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 363 LL K G+ + A +I +M + +VV+Y+ ++ G+ K G++DE LF EM+ ++ + ++Y+T++ +Y+K G +EA+D+ RE G+K DVV Y+AL+ K G Sbjct: 380 LLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQG 493 HSP 4 Score: 81.2629 bits (199), Expect = 3.774e-15 Identity = 40/120 (33.33%), Postives = 73/120 (60.83%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 LL++ ++ G +E A ++ EM + + +DV +YN LL K G+ D + +M A+++ PN+++YST+ID ++K G +DEA+++F E ++ + D V Y+ L+ K G E A+ Sbjct: 345 LLAVCSRGGLWEAARNLFDEMSNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEAL 464 HSP 5 Score: 68.9366 bits (167), Expect = 7.456e-11 Identity = 30/86 (34.88%), Postives = 54/86 (62.79%), Query Frame = -1 Query: 106 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMD 363 L+ Y+K G ++EA+++ RE + +G+R DVV Y+AL+ K G +L DEM + +SPN++TY+++ID + + + + D Sbjct: 520 LIDGYSKGGLYKEAMEVFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMERSAD 605
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy TrEMBL
Match: R0HMT7_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10022597mg PE=4 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 1.388e-55 Identity = 95/121 (78.51%), Postives = 106/121 (87.60%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 LLSIY K+GR EEALDI REM G+++DVVTYNALLGGYGKQGKYDEV+ +F EMK + V PNLLTYST+ID YSKGGLY EAM++FREFK AGL+ADVVLYSALIDALCKNGLV SAVS Sbjct: 459 LLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVVPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVS 579 HSP 2 Score: 93.9745 bits (232), Expect = 1.922e-19 Identity = 45/120 (37.50%), Postives = 78/120 (65.00%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQG-KYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L+S Y + G EEA+ + M+D G+R ++VTYNA++ GK G ++ +V FDEM+ V P+ +T+++++ V S+GGL++ A ++F E ++ DV Y+ L+DA+CK G ++ A Sbjct: 283 LISAYGRSGLHEEAISVFSSMKDHGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQKNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMSNRRIEQDVFSYNTLLDAICKGGQMDLA 402 HSP 3 Score: 83.5741 bits (205), Expect = 5.993e-16 Identity = 41/120 (34.17%), Postives = 74/120 (61.67%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 LL++ ++ G +E A ++ EM + + +DV +YN LL K G+ D + +M A+++ PN+++YST+ID ++K G +DEA+++F E ++ G+ D V Y+ L+ K G E A+ Sbjct: 354 LLAVCSRGGLWEAARNLFDEMSNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEAL 473 HSP 4 Score: 81.2629 bits (199), Expect = 4.355e-15 Identity = 39/114 (34.21%), Postives = 69/114 (60.53%), Query Frame = -1 Query: 22 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 363 LL K G+ + A +I +M + +VV+Y+ ++ G+ K G++DE LF EM+ ++ + ++Y+T++ +Y+K G +EA+D+ RE G+K DVV Y+AL+ K G Sbjct: 389 LLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQG 502 HSP 5 Score: 69.3218 bits (168), Expect = 5.407e-11 Identity = 31/86 (36.05%), Postives = 54/86 (62.79%), Query Frame = -1 Query: 106 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMD 363 L+ Y+K G ++EA++I RE + +G+R DVV Y+AL+ K G +L DEM + +SPN++TY+++ID + + + + D Sbjct: 529 LIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMERSAD 614 HSP 6 Score: 64.3142 bits (155), Expect = 2.591e-9 Identity = 34/120 (28.33%), Postives = 63/120 (52.50%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGL-YDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 ++S + G+ A I G V ++AL+ YG+ G ++E ++F MK + PNL+TY+ +ID KGG+ + + F E + G++ D + +++L+ + GL E+A Sbjct: 248 MISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFSSMKDHGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQKNGVQPDRITFNSLLAVCSRGGLWEAA 367
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy TrEMBL
Match: A0A087GMW4_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA6G083500 PE=4 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 8.614e-55 Identity = 94/121 (77.69%), Postives = 106/121 (87.60%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 LLSIY KLGR EEALD+ REM G+++DVVTYNALLGGYGKQ KYDEV+ +F EMK + VSPNLLTYST+IDVYSKGGLY EAM++FREFK GL+ADVVLYSALIDALCKNGLV SAV+ Sbjct: 392 LLSIYTKLGRSEEALDVFREMASVGIKKDVVTYNALLGGYGKQRKYDEVKNVFAEMKREHVSPNLLTYSTLIDVYSKGGLYKEAMEIFREFKRVGLRADVVLYSALIDALCKNGLVGSAVT 512 HSP 2 Score: 95.1301 bits (235), Expect = 5.922e-20 Identity = 46/121 (38.02%), Postives = 82/121 (67.77%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQG-KYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 L+S Y + G FEEA+ + M++ G+R ++VTYNA++ GK G ++ +V A+FDEM+ V P+ +T+++++ V S+GGL++ A ++F E ++ DV Y+ L+DA+CK G ++ A+ Sbjct: 216 LISAYGRSGLFEEAIGVFNSMKNYGLRPNLVTYNAVIDACGKGGMEFKQVAAIFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMLNRRIEQDVFSYNTLLDAICKGGQMDLAL 336 HSP 3 Score: 83.1889 bits (204), Expect = 7.997e-16 Identity = 41/107 (38.32%), Postives = 70/107 (65.42%), Query Frame = -1 Query: 43 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALI 363 LL K G+ + AL+I +M + +VV+Y+ ++ G+ K G++DE LFDEM+ ++ + ++Y+T++ +Y+K G +EA+DVFRE G+K DVV Y+AL+ Sbjct: 322 LLDAICKGGQMDLALEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFDEMRYLGIALDRVSYNTLLSIYTKLGRSEEALDVFREMASVGIKKDVVTYNALL 428 HSP 4 Score: 80.4925 bits (197), Expect = 6.594e-15 Identity = 41/120 (34.17%), Postives = 74/120 (61.67%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 LL++ ++ G +E A ++ EM + + +DV +YN LL K G+ D + +M A+++ PN+++YST+ID ++K G +DEA+++F E ++ G+ D V Y+ L+ K G E A+ Sbjct: 287 LLAVCSRGGLWEAARNLFDEMLNRRIEQDVFSYNTLLDAICKGGQMDLALEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFDEMRYLGIALDRVSYNTLLSIYTKLGRSEEAL 406 HSP 5 Score: 71.2478 bits (173), Expect = 9.913e-12 Identity = 34/111 (30.63%), Postives = 65/111 (58.56%), Query Frame = -1 Query: 1 FEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 333 F++ I EM+ +G++ D +T+N+LL + G ++ R LFDEM +++ ++ +Y+T++D KGG D A+++ + + +VV YS +ID K G + A++ Sbjct: 262 FKQVAAIFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMLNRRIEQDVFSYNTLLDAICKGGQMDLALEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALN 372 HSP 6 Score: 68.1662 bits (165), Expect = 1.113e-10 Identity = 35/120 (29.17%), Postives = 66/120 (55.00%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGL-YDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 ++S +LG+ E A + G V ++AL+ YG+ G ++E +F+ MK + PNL+TY+ +ID KGG+ + + +F E + G++ D + +++L+ + GL E+A Sbjct: 181 MISTLGRLGKVEMAKSVFEIALAGGYGNTVYAFSALISAYGRSGLFEEAIGVFNSMKNYGLRPNLVTYNAVIDACGKGGMEFKQVAAIFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAA 300 HSP 7 Score: 65.4698 bits (158), Expect = 1.033e-9 Identity = 30/77 (38.96%), Postives = 50/77 (64.94%), Query Frame = -1 Query: 133 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSK 363 L+ +Y+K G ++EA++I RE + G+R DVV Y+AL+ K G L DEM + +SPN++TY+++ID + + Sbjct: 462 LIDVYSKGGLYKEAMEIFREFKRVGLRADVVLYSALIDALCKNGLVGSAVTLIDEMTKEGISPNVVTYNSIIDAFGR 538
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy TrEMBL
Match: M5X9I1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001263mg PE=4 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.420e-54 Identity = 89/120 (74.17%), Postives = 108/120 (90.00%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 LLS+Y KLGRFE+AL +C+EME G+ +DVV+YNALLGGYGKQGKYD+ + ++++MK ++VSPN+LTYST+IDVYSKGGLY EAM VFREFK AGLKADVVLYS L++ALCKNGLVESAV Sbjct: 403 LLSLYGKLGRFEDALKVCKEMESVGIAKDVVSYNALLGGYGKQGKYDDAKRMYNQMKEERVSPNILTYSTLIDVYSKGGLYMEAMKVFREFKQAGLKADVVLYSELVNALCKNGLVESAV 522 HSP 2 Score: 81.6481 bits (200), Expect = 2.761e-15 Identity = 43/120 (35.83%), Postives = 72/120 (60.00%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 LL++ ++ G +E A ++ EM D G+ +D+ TYN L+ K G+ D + EM ++ + PN++TYST+ID Y+K G ++A+ +F E K+ + D VLY+ L+ K G E A+ Sbjct: 298 LLAVCSRGGLWEMARNLFSEMVDRGIDQDIYTYNTLIDAICKGGQMDLAYQIMSEMPSKNILPNVVTYSTIIDGYAKAGRLEDALSLFNEMKFLAIGLDRVLYNTLLSLYGKLGRFEDAL 417 HSP 3 Score: 75.8702 bits (185), Expect = 2.843e-13 Identity = 39/120 (32.50%), Postives = 69/120 (57.50%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGL-YDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 ++S +LG+ E A ++ + + G + V TY+AL+ YG+ G +E +F+ MK + PNL+TY+ +ID Y KGG+ + +++F E G + D + Y++L+ + GL E A Sbjct: 192 MISTLGRLGKVELAKNVFQTAVNEGYGKTVYTYSALITAYGRNGYCEEAIRVFESMKDSGLKPNLVTYNAVIDAYGKGGVEFKRVVEIFNEMLRNGEQPDRITYNSLLAVCSRGGLWEMA 311 HSP 4 Score: 72.0182 bits (175), Expect = 5.198e-12 Identity = 46/157 (29.30%), Postives = 72/157 (45.86%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGK------------------------------------YDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 L++ Y + G EEA+ + M+DSG++ ++VTYNA++ YGK G ++ R LF EM + + ++ TY+T+ID KGG D A + E + +VV YS +ID K G +E A+S Sbjct: 227 LITAYGRNGYCEEAIRVFESMKDSGLKPNLVTYNAVIDAYGKGGVEFKRVVEIFNEMLRNGEQPDRITYNSLLAVCSRGGLWEMARNLFSEMVDRGIDQDIYTYNTLIDAICKGGQMDLAYQIMSEMPSKNILPNVVTYSTIIDGYAKAGRLEDALS 383 HSP 5 Score: 70.0922 bits (170), Expect = 2.558e-11 Identity = 37/114 (32.46%), Postives = 66/114 (57.89%), Query Frame = -1 Query: 22 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 363 L+ K G+ + A I EM + +VVTY+ ++ GY K G+ ++ +LF+EMK + + + Y+T++ +Y K G +++A+ V +E + G+ DVV Y+AL+ K G Sbjct: 333 LIDAICKGGQMDLAYQIMSEMPSKNILPNVVTYSTIIDGYAKAGRLEDALSLFNEMKFLAIGLDRVLYNTLLSLYGKLGRFEDALKVCKEMESVGIAKDVVSYNALLGGYGKQG 446 HSP 6 Score: 61.2326 bits (147), Expect = 2.466e-8 Identity = 28/86 (32.56%), Postives = 51/86 (59.30%), Query Frame = -1 Query: 106 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMD 363 L+ +Y+K G + EA+ + RE + +G++ DVV Y+ L+ K G + L DEM + + PN++TY+++ID + + + A D Sbjct: 473 LIDVYSKGGLYMEAMKVFREFKQAGLKADVVLYSELVNALCKNGLVESAVLLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECAAD 558
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy TrEMBL
Match: A0A0D6QYD1_ARACU (Uncharacterized protein OS=Araucaria cunninghamii PE=4 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 2.884e-54 Identity = 89/121 (73.55%), Postives = 106/121 (87.60%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 L+SIYAKLGRFEEAL +C EME +G+ +D VTYNALLGGYGKQG+YD+V+ALF EMK + V+PN+LTYST+ID +SKGGL DEAM + +EFK +GLK DVVLYSALIDALCKNGLVE A+S Sbjct: 414 LVSIYAKLGRFEEALAVCEEMERAGINKDAVTYNALLGGYGKQGRYDKVKALFQEMKTEAVAPNVLTYSTLIDTFSKGGLQDEAMQILKEFKHSGLKPDVVLYSALIDALCKNGLVEEALS 534 HSP 2 Score: 92.8189 bits (229), Expect = 4.482e-19 Identity = 46/122 (37.70%), Postives = 78/122 (63.93%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQG-KYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 L+S Y + G EA+D+ M+ G + ++VTYNA++ GK G + E +FDEM + V P+ +T++++I V S+GGL++EA +F+E + G+ D+ Y+ L+DA+CK G ++ A S Sbjct: 238 LISAYGRSGFCWEAMDVFEMMKSCGCKPNLVTYNAVIDACGKGGVDFKEALQVFDEMIREGVQPDRITFNSLIAVCSRGGLWEEAQGMFKEMLYRGIDQDIFTYNTLLDAVCKGGQMDLAAS 359 HSP 3 Score: 85.5001 bits (210), Expect = 1.539e-16 Identity = 44/121 (36.36%), Postives = 74/121 (61.16%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 L+++ ++ G +EEA + +EM G+ +D+ TYN LL K G+ D ++ M K+ PN++TYST++D Y+K G DEA++++ E K+AG+ D V Y+ L+ K G E A++ Sbjct: 309 LIAVCSRGGLWEEAQGMFKEMLYRGIDQDIFTYNTLLDAVCKGGQMDLAASIMSGMSHNKILPNVVTYSTVMDGYAKAGRLDEALELYHEMKYAGISLDRVSYNTLVSIYAKLGRFEEALA 429 HSP 4 Score: 73.9442 bits (180), Expect = 1.327e-12 Identity = 40/114 (35.09%), Postives = 66/114 (57.89%), Query Frame = -1 Query: 22 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 363 LL K G+ + A I M + + +VVTY+ ++ GY K G+ DE L+ EMK +S + ++Y+T++ +Y+K G ++EA+ V E + AG+ D V Y+AL+ K G Sbjct: 344 LLDAVCKGGQMDLAASIMSGMSHNKILPNVVTYSTVMDGYAKAGRLDEALELYHEMKYAGISLDRVSYNTLVSIYAKLGRFEEALAVCEEMERAGINKDAVTYNALLGGYGKQG 457 HSP 5 Score: 72.4034 bits (176), Expect = 4.456e-12 Identity = 41/120 (34.17%), Postives = 67/120 (55.83%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGL-YDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 ++SI +LGR E A + + + G V ++AL+ YG+ G E +F+ MK+ PNL+TY+ +ID KGG+ + EA+ VF E G++ D + +++LI + GL E A Sbjct: 203 MISILGRLGRVEVARRVFDKAKAEGYGNTVYAFSALISAYGRSGFCWEAMDVFEMMKSCGCKPNLVTYNAVIDACGKGGVDFKEALQVFDEMIREGVQPDRITFNSLIAVCSRGGLWEEA 322 HSP 6 Score: 68.9366 bits (167), Expect = 6.013e-11 Identity = 37/133 (27.82%), Postives = 71/133 (53.38%), Query Frame = -1 Query: 28 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYD---------------------EAMDVFREFKWAGLKADVVLYSALIDALCK 363 L+ ++K G +EA+ I +E + SG++ DVV Y+AL+ K G +E +L D+M + V PN++TY+++ID + + G + +++F + G+K +VV +SA+++A + Sbjct: 484 LIDTFSKGGLQDEAMQILKEFKHSGLKPDVVLYSALIDALCKNGLVEEALSLLDQMTNKGVKPNVVTYNSIIDAFGRSGQFGIERTLSMSFSEDTRQTSKEILYTVEMFHKMHELGIKPNVVTFSAILNACSR 616 HSP 7 Score: 65.0846 bits (157), Expect = 1.206e-9 Identity = 33/110 (30.00%), Postives = 61/110 (55.45%), Query Frame = -1 Query: 4 FEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 333 F+EAL + EM G++ D +T+N+L+ + G ++E + +F EM + + ++ TY+T++D KGG D A + + +VV YS ++D K G ++ A+ Sbjct: 284 FKEALQVFDEMIREGVQPDRITFNSLIAVCSRGGLWEEAQGMFKEMLYRGIDQDIFTYNTLLDAVCKGGQMDLAASIMSGMSHNKILPNVVTYSTVMDGYAKAGRLDEAL 393
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy Swiss-Prot
Match: PP123_ARATH (Pentatricopeptide repeat-containing protein At1g74750 OS=Arabidopsis thaliana GN=At1g74750 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.097e-17 Identity = 40/119 (33.61%), Postives = 71/119 (59.66%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L+ I+AK G + A+D+ + M+++G+ D TY+ ++ GK G LF EM Q +PNL+T++ MI +++K Y+ A+ ++R+ + AG + D V YS +++ L G +E A Sbjct: 435 LIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEA 553 HSP 2 Score: 78.9518 bits (193), Expect = 3.243e-16 Identity = 41/120 (34.17%), Postives = 66/120 (55.00%), Query Frame = -1 Query: 7 SIYAKLGR---FEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 357 ++ LGR F E + EM G + + VTYN L+ YG+ E +F++M+ P+ +TY T+ID+++K G D AMD+++ + AGL D YS +I+ L K G + +A Sbjct: 364 TMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAA 483 HSP 3 Score: 68.5514 bits (166), Expect = 9.009e-13 Identity = 33/96 (34.38%), Postives = 51/96 (53.12%), Query Frame = -1 Query: 4 GMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 291 G + D TY ++G G+ ++ E+ L DEM PN +TY+ +I Y + EAM+VF + + AG + D V Y LID K G ++ A+ Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAM 449 HSP 4 Score: 61.2326 bits (147), Expect = 2.789e-10 Identity = 30/112 (26.79%), Postives = 63/112 (56.25%), Query Frame = -1 Query: 28 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCK 363 +++++AK +E AL + R+M+++G + D VTY+ ++ G G +E +F EM+ + P+ Y ++D++ K G D+A ++ AGL+ +V ++L+ + Sbjct: 505 MIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLR 616
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy Swiss-Prot
Match: PP344_ARATH (Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.319e-17 Identity = 45/115 (39.13%), Postives = 64/115 (55.65%), Query Frame = -1 Query: 4 AKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 348 +K GR EA + M D G R + YN L+ G+GK G+ D ALF M + V P+L TYS ++D G DE + F+E K +GL DVV Y+ +I+ L K+ +E A+ Sbjct: 902 SKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEAL 1016 HSP 2 Score: 79.337 bits (194), Expect = 2.629e-16 Identity = 41/120 (34.17%), Postives = 71/120 (59.17%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQK-VSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L+ +GR +E L +E+++SG+ DVV YN ++ G GK + +E LF+EMK + ++P+L TY+++I G+ +EA ++ E + AGL+ +V ++ALI +G E A Sbjct: 967 LVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHA 1086 HSP 3 Score: 75.485 bits (184), Expect = 4.375e-15 Identity = 37/120 (30.83%), Postives = 65/120 (54.17%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 ++ Y+K+G +EA+ + EM ++G DV+ N+L+ K + DE +F MK K+ P ++TY+T++ K G EA+++F G + + ++ L D LCKN V A+ Sbjct: 509 MMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLAL 628 HSP 4 Score: 71.2478 bits (173), Expect = 1.339e-13 Identity = 37/113 (32.74%), Postives = 60/113 (53.10%), Query Frame = -1 Query: 22 LSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 360 + + + G+ EA +I + M+D G DVVTY L+ K D + +F++MK + P+ +TY T++D +S D + E + G DVV ++ L+DALCK G Sbjct: 265 IRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAG 377 HSP 5 Score: 70.4774 bits (171), Expect = 2.420e-13 Identity = 41/115 (35.65%), Postives = 60/115 (52.17%), Query Frame = -1 Query: 4 AKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 348 AK GR EA I ++D G+ D VTYN ++ Y K G+ DE L EM P+++ +++I+ K DEA +F K LK VV Y+ L+ L KNG ++ A+ Sbjct: 479 AKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAI 593 HSP 6 Score: 69.707 bits (169), Expect = 4.055e-13 Identity = 38/103 (36.89%), Postives = 57/103 (55.34%), Query Frame = -1 Query: 31 RF-EEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALC 336 RF EA+++ R M G R + TY++L+ G GK+ D V L EM+ + PN+ T++ I V + G +EA ++ + G DVV Y+ LIDALC Sbjct: 202 RFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALC 304 HSP 7 Score: 68.9366 bits (167), Expect = 9.422e-13 Identity = 40/120 (33.33%), Postives = 61/120 (50.83%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 L++ K R +EA + M++ ++ VVTYN LL G GK GK E LF+ M + PN +T++T+ D K A+ + + G DV Y+ +I L KNG V+ A+ Sbjct: 544 LINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAM 663 HSP 8 Score: 62.7734 bits (151), Expect = 9.534e-11 Identity = 37/114 (32.46%), Postives = 56/114 (49.12%), Query Frame = -1 Query: 22 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 363 L+ K G F EA D M D G+ ++ TYN L+ G + + D+ LF M++ V P TY ID Y K G A++ F + K G+ ++V +A + +L K G Sbjct: 369 LVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAG 482 HSP 9 Score: 62.3882 bits (150), Expect = 1.393e-10 Identity = 36/105 (34.29%), Postives = 54/105 (51.43%), Query Frame = -1 Query: 22 FEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKW-AGLKADVVLYSALIDALCKNG 333 E A D+ +++ +G DV TYN LL YGK GK DE+ L+ EM + N +T++ +I K G D+A+D++ + Y LID L K+G Sbjct: 801 IEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSG 905 HSP 10 Score: 61.6178 bits (148), Expect = 2.149e-10 Identity = 37/121 (30.58%), Postives = 59/121 (48.76%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICRE-MEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 ++S K G ++ALD+ + M D TY L+ G K G+ E + LF+ M PN Y+ +I+ + K G D A +F+ G++ D+ YS L+D LC G V+ + Sbjct: 861 VISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGL 981 HSP 11 Score: 59.6918 bits (143), Expect = 1.157e-9 Identity = 37/115 (32.17%), Postives = 61/115 (53.04%), Query Frame = -1 Query: 7 YAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 351 Y K G AL+ +M+ G+ ++V NA L K G+ E + +F +K + P+ +TY+ M+ YSK G DEA+ + E G + DV++ ++LI+ L K V+ A Sbjct: 443 YGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEA 557 HSP 12 Score: 58.5362 bits (140), Expect = 2.811e-9 Identity = 36/122 (29.51%), Postives = 59/122 (48.36%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRAL-FDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 LL Y K G+ +E ++ +EM + +T+N ++ G K G D+ L +D M + SP TY +ID SK G EA +F G + + +Y+ LI+ K G ++A + Sbjct: 826 LLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACA 947 HSP 13 Score: 56.6102 bits (135), Expect = 1.083e-8 Identity = 36/120 (30.00%), Postives = 65/120 (54.17%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWA-GLKADVVLYSALIDALCKNGLVESA 363 L++ + K G + A + + M G+R D+ TY+ L+ G+ DE F E+K ++P+++ Y+ +I+ K +EA+ +F E K + G+ D+ Y++LI L G+VE A Sbjct: 932 LINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEA 1051 HSP 14 Score: 54.6842 bits (130), Expect = 4.491e-8 Identity = 35/116 (30.17%), Postives = 61/116 (52.59%), Query Frame = -1 Query: 4 KLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRAL--FDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 345 ++ R ++AL++ ME G++ TY + YGK G D V AL F++MK + ++PN++ + + +K G EA +F K GL D V Y+ ++ K G ++ A+ Sbjct: 410 RVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSG--DSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAI 523 HSP 15 Score: 53.5286 bits (127), Expect = 1.029e-7 Identity = 34/101 (33.66%), Postives = 50/101 (49.50%), Query Frame = -1 Query: 4 EMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 306 EME G DVVT+ L+ K G + E D M+ Q + PNL TY+T+I + D+A+++F + G+K Y ID K+G SA+ Sbjct: 353 EMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSAL 453 HSP 16 Score: 53.5286 bits (127), Expect = 1.243e-7 Identity = 27/99 (27.27%), Postives = 56/99 (56.57%), Query Frame = -1 Query: 4 EDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 300 +D G++ + TYN L+GG + + + +F ++K+ P++ TY+ ++D Y K G DE ++++E +A+ + ++ +I L K G V+ A+ Sbjct: 777 KDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDAL 875 HSP 17 Score: 53.1434 bits (126), Expect = 1.435e-7 Identity = 31/114 (27.19%), Postives = 54/114 (47.37%), Query Frame = -1 Query: 25 SIYAKLGR---FEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKN 357 S+ LG+ + + + +EME G++ +V T+ + G+ GK +E + M + P+++TY+ +ID D A +VF + K K D V Y L+D N Sbjct: 228 SLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDN 341 HSP 18 Score: 53.1434 bits (126), Expect = 1.570e-7 Identity = 31/102 (30.39%), Postives = 52/102 (50.98%), Query Frame = -1 Query: 46 AKLGRFEEALDICREMEDS-GMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSAL 348 K R EEAL + EM+ S G+ D+ TYN+L+ G G +E +++E++ + PN+ T++ +I YS G + A V++ G + Y L Sbjct: 1007 GKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy Swiss-Prot
Match: PPR91_ARATH (Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=3 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 1.383e-17 Identity = 40/117 (34.19%), Postives = 68/117 (58.12%), Query Frame = -1 Query: 13 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVE 363 L+ + K R EE +++ REM G+ + VTYN L+ G + G D + +F EM + V PN++TY+T++D K G ++AM VF + + ++ + Y+ +I+ +CK G VE Sbjct: 402 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 518 HSP 2 Score: 74.7146 bits (182), Expect = 6.465e-15 Identity = 37/111 (33.33%), Postives = 61/111 (54.95%), Query Frame = -1 Query: 7 GRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 339 G + A +I +EM G+ +++TYN LL G K GK ++ +F+ ++ K+ P + TY+ MI+ K G ++ D+F G+K DVV Y+ +I C+ G E A Sbjct: 445 GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 555 HSP 3 Score: 70.8626 bits (172), Expect = 1.314e-13 Identity = 34/114 (29.82%), Postives = 65/114 (57.02%), Query Frame = -1 Query: 7 AKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 348 K ++AL++ +EME G+R +VVTY++L+ G++ + L +M +K++P++ T+S +ID + K G EA ++ E + +V YS+LI+ C + ++ A Sbjct: 267 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA 380 HSP 4 Score: 70.8626 bits (172), Expect = 1.418e-13 Identity = 36/102 (35.29%), Postives = 60/102 (58.82%), Query Frame = -1 Query: 22 EALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 327 EA+ + M G + D+VTY ++ G K+G D L ++M+ K+ P +L Y+T+ID K D+A+++F+E + G++ +VV YS+LI LC G Sbjct: 204 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYG 305 HSP 5 Score: 69.3218 bits (168), Expect = 3.878e-13 Identity = 36/114 (31.58%), Postives = 63/114 (55.26%), Query Frame = -1 Query: 22 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 363 L+ + K G+ EA + EM + +VTY++L+ G+ + DE + +F+ M ++ P+++TY+T+I + K +E M+VFRE GL + V Y+ LI L + G Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 445 HSP 6 Score: 68.9366 bits (167), Expect = 6.287e-13 Identity = 38/120 (31.67%), Postives = 63/120 (52.50%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 L+S GR+ +A + +M + + DV T++AL+ + K+GK E L+DEM + + P+++TYS++I+ + DEA +F DVV Y+ LI CK VE + Sbjct: 297 LISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGM 416 HSP 7 Score: 68.9366 bits (167), Expect = 6.782e-13 Identity = 38/120 (31.67%), Postives = 65/120 (54.17%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 L++ + R +EA + M DVVTYN L+ G+ K + +E +F EM + + N +TY+ +I + G D A ++F+E G+ +++ Y+ L+D LCKNG +E A+ Sbjct: 367 LINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM 486 HSP 8 Score: 67.0106 bits (162), Expect = 2.935e-12 Identity = 36/112 (32.14%), Postives = 60/112 (53.57%), Query Frame = -1 Query: 28 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCK 363 LL+ Y R EA+ + +M +G + + VT+N L+ G K E AL D M A+ P+L+TY +++ K G D A ++ + + L+ V++Y+ +ID LCK Sbjct: 157 LLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCK 268 HSP 9 Score: 62.7734 bits (151), Expect = 8.546e-11 Identity = 36/114 (31.58%), Postives = 59/114 (51.75%), Query Frame = -1 Query: 10 AKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG-LVES 348 K G + A ++ +ME + V+ YN ++ G K D+ LF EM+ + + PN++TYS++I G + +A + + + DV +SALIDA K G LVE+ Sbjct: 232 CKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEA 345 HSP 10 Score: 58.5362 bits (140), Expect = 2.148e-9 Identity = 36/119 (30.25%), Postives = 64/119 (53.78%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 LL K G+ E+A+ + ++ S M + TYN ++ G K GK ++ LF + + V P+++ Y+TMI + + G +EA +F+E K G + Y+ LI A ++G E++ Sbjct: 472 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREAS 590 HSP 11 Score: 58.151 bits (139), Expect = 2.913e-9 Identity = 32/114 (28.07%), Postives = 55/114 (48.25%), Query Frame = -1 Query: 22 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 363 L++ + + + AL + +M G ++VT ++LL GY + E AL D+M PN +T++T+I EAM + G + D+V Y +++ LCK G Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRG 235 HSP 12 Score: 56.6102 bits (135), Expect = 9.814e-9 Identity = 28/94 (29.79%), Postives = 49/94 (52.13%), Query Frame = -1 Query: 67 AKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKAD 348 K G+ E+ D+ + G++ DVV YN ++ G+ ++G +E ALF EMK PN Y+T+I + G + + ++ +E + G D Sbjct: 512 CKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 605
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy Swiss-Prot
Match: PP306_ARATH (Pentatricopeptide repeat-containing protein At4g11690 OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.403e-17 Identity = 38/108 (35.19%), Postives = 66/108 (61.11%), Query Frame = -1 Query: 22 KLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 345 K GR ++A + EM + G+ ++VTYN L+GG ++ K +E + D+MK+ ++PNL+TY+T+ID + G +A+ + R+ K GL +V Y+ L+ C+ G Sbjct: 280 KDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKG 387 HSP 2 Score: 69.3218 bits (168), Expect = 4.359e-13 Identity = 33/119 (27.73%), Postives = 65/119 (54.62%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L+ + +G+ +AL +CR+++ G+ +VTYN L+ G+ ++G + EM+ + + P+ +TY+ +ID +++ ++A+ + + GL DV YS LI C G + A Sbjct: 344 LIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEA 462 HSP 3 Score: 65.4698 bits (158), Expect = 9.144e-12 Identity = 36/112 (32.14%), Postives = 60/112 (53.57%), Query Frame = -1 Query: 28 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCK 363 L+ +A+ E+A+ + ME+ G+ DV TY+ L+ G+ +G+ +E LF M + PN + Y+TMI Y K G A+ + +E + L +V Y +I+ LCK Sbjct: 414 LIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCK 525 HSP 4 Score: 61.6178 bits (148), Expect = 1.593e-10 Identity = 30/111 (27.03%), Postives = 63/111 (56.76%), Query Frame = -1 Query: 4 RFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 336 + EA + +M+ G+ +++TYN L+ G+ GK + +L ++K++ +SP+L+TY+ ++ + + G A + +E + G+K V Y+ LID ++ +E A+ Sbjct: 318 KLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAI 428 HSP 5 Score: 61.6178 bits (148), Expect = 1.851e-10 Identity = 33/115 (28.70%), Postives = 64/115 (55.65%), Query Frame = -1 Query: 1 KLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 345 K G ++ ++ +M++ G+ ++ TYN ++ K G+ + +FDEM+ + VS N++TY+T+I + +EA V + K G+ +++ Y+ LID C G + A+S Sbjct: 245 KNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALS 359 HSP 6 Score: 61.6178 bits (148), Expect = 1.868e-10 Identity = 34/106 (32.08%), Postives = 56/106 (52.83%), Query Frame = -1 Query: 28 KLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCK 345 K G E+A D+ EM G+ + TY L+ G K G + ++++M+ V PNL TY+ +++ K G +A VF E + G+ ++V Y+ LI LC+ Sbjct: 210 KKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCR 315 HSP 7 Score: 57.3806 bits (137), Expect = 4.249e-9 Identity = 29/111 (26.13%), Postives = 61/111 (54.95%), Query Frame = -1 Query: 7 GRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 339 G E++ D+ E+ + G +VV Y L+ G K+G+ ++ + LF EM + N TY+ +I+ K G+ + +++ + + G+ ++ Y+ +++ LCK+G + A Sbjct: 177 GEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDA 287 HSP 8 Score: 50.8322 bits (120), Expect = 6.366e-7 Identity = 30/87 (34.48%), Postives = 49/87 (56.32%), Query Frame = -1 Query: 19 DVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGL 279 DV ++ L+ G + G+ ++ L E+ SPN++ Y+T+ID K G ++A D+F E GL A+ Y+ LI+ L KNG+ Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGV 248
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy Swiss-Prot
Match: PPR49_ARATH (Pentatricopeptide repeat-containing protein At1g18900 OS=Arabidopsis thaliana GN=At1g18900 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.454e-17 Identity = 41/119 (34.45%), Postives = 69/119 (57.98%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L+ I+AK G + A+D+ + M+ G+ D TY+ ++ GK G LF EM Q +PNL+TY+ M+D+++K Y A+ ++R+ + AG + D V YS +++ L G +E A Sbjct: 440 LIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEA 558 HSP 2 Score: 75.8702 bits (185), Expect = 2.843e-15 Identity = 38/113 (33.63%), Postives = 63/113 (55.75%), Query Frame = -1 Query: 7 KLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 345 + G + LD EM G + + VTYN L+ YG+ +E +F++M+ P+ +TY T+ID+++K G D AMD+++ + GL D YS +I+ L K G + +A Sbjct: 379 QFGAINKLLD---EMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAA 488 HSP 3 Score: 68.5514 bits (166), Expect = 8.951e-13 Identity = 33/96 (34.38%), Postives = 51/96 (53.12%), Query Frame = -1 Query: 4 GMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 291 G + D TY ++G G+ ++ + L DEM PN +TY+ +I Y + +EAM+VF + + AG K D V Y LID K G ++ A+ Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAM 454 HSP 4 Score: 60.077 bits (144), Expect = 7.437e-10 Identity = 31/119 (26.05%), Postives = 66/119 (55.46%), Query Frame = -1 Query: 10 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCK-NGLVES 363 ++ ++AK ++ AL + R+M+++G D VTY+ ++ G G +E A+F EM+ + P+ Y ++D++ K G ++A ++ AGL+ +V ++L+ + N + E+ Sbjct: 510 MMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEA 628 HSP 5 Score: 59.3066 bits (142), Expect = 1.403e-9 Identity = 31/108 (28.70%), Postives = 56/108 (51.85%), Query Frame = -1 Query: 40 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALID 363 L+ Y + EA+++ +M+++G + D VTY L+ + K G D ++ M+A +SP+ TYS +I+ K G A +F E G ++V Y+ ++D Sbjct: 405 LIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD 512 HSP 6 Score: 56.9954 bits (136), Expect = 6.425e-9 Identity = 35/119 (29.41%), Postives = 56/119 (47.06%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 +++ K G A + EM D G ++VTYN ++ + K Y L+ +M+ P+ +TYS +++V G +EA VF E + D +Y L+D K G VE A Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKA 593 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0010846 ID=g.arboreum_cottongen_reftransV1_0010846; Name=g.arboreum_cottongen_reftransV1_0010846; organism=Gossypium arboreum; type=contig; length=363bpback to top |