g.arboreum_cottongen_reftransV1_0010846, g.arboreum_cottongen_reftransV1_0010846 (contig) Gossypium arboreum

Overview


Name	g.arboreum_cottongen_reftransV1_0010846
Unique Name	g.arboreum_cottongen_reftransV1_0010846
Type	contig
Organism	Gossypium arboreum (Tree cotton)
Sequence length	363

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Chr4	chromosome	g.arboreum_cottongen_reftransV1_0010846:1..363 . Chr4:135482029..135482391 -

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium arboreum CottonGen RefTrans V1	2016-11-14
InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1	2016-11-14
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL	2016-11-15
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt	2016-11-15

Homology

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy TrEMBL
Match: A0A067H4L1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g002814mg PE=4 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 1.144e-61
Identity = 102/121 (84.30%), Postives = 112/121 (92.56%), Query Frame = -1

Query:    1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363
            +LSIYAKLGRFEEAL +C+EME SG+R+D VTYNALLGGYGKQGKYDEVR +F++MKA  VSPNLLTYST+IDVYSKGGLY EAM +FREFK AGLKADVVLYSALIDALCKNGLVESAVS
Sbjct:  410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530

HSP 2 Score: 85.8853 bits (211), Expect = 1.084e-16
Identity = 45/120 (37.50%), Postives = 72/120 (60.00%), Query Frame = -1

Query:    4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363
            LL++ ++ G +E A ++  EM   G+ +D+ TYN LL    K  + D    +  EM A+ +SPN++TYSTMID Y+K G  D+A+++F E K+ G+  D V Y+ ++    K G  E A+
Sbjct:  305 LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424

HSP 3 Score: 72.0182 bits (175), Expect = 5.691e-12
Identity = 37/114 (32.46%), Postives = 67/114 (58.77%), Query Frame = -1

Query:   22 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 363
            LL    K  + + A +I  EM    +  +VVTY+ ++ GY K G+ D+   +F EMK   +  + ++Y+T++ +Y+K G ++EA+ V +E + +G++ D V Y+AL+    K G
Sbjct:  340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453

HSP 4 Score: 68.9366 bits (167), Expect = 6.729e-11
Identity = 35/120 (29.17%), Postives = 68/120 (56.67%), Query Frame = -1

Query:    7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGL-YDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363
            ++SI  +LG+ + A +I     + G    V  ++AL+  YG+ G   E  ++F+ MK   + PNL+TY+ +ID   KGG+ +   +++F +    G++ D + +++L+    + GL E+A
Sbjct:  199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318

HSP 5 Score: 68.5514 bits (166), Expect = 9.006e-11
Identity = 33/111 (29.73%), Postives = 63/111 (56.76%), Query Frame = -1

Query:    1 FEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 333
            F+  ++I  +M  +G++ D +T+N+LL    + G ++  R LF+EM  + +  ++ TY+T++D   KG   D A ++  E     +  +VV YS +ID   K G ++ A++
Sbjct:  280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390

HSP 6 Score: 66.2402 bits (160), Expect = 5.821e-10
Identity = 37/112 (33.04%), Postives = 67/112 (59.82%), Query Frame = -1

Query:   31 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAM-DVFREFKWAGLKADVVLYSALIDALC 363
            L+ +Y+K G ++EA+ I RE + +G++ DVV Y+AL+    K G  +   +L DEM  + + PN++TY+++ID + +    +  + DV R+    G + +    SA +DA+C
Sbjct:  480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDL---GKQKE----SANLDAMC 584

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy TrEMBL
Match: V4TW73_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10018807mg PE=4 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 1.167e-61
Identity = 102/121 (84.30%), Postives = 112/121 (92.56%), Query Frame = -1

Query:    1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363
            +LSIYAKLGRFEEAL +C+EME SG+R+D VTYNALLGGYGKQGKYDEVR +F++MKA  VSPNLLTYST+IDVYSKGGLY EAM +FREFK AGLKADVVLYSALIDALCKNGLVESAVS
Sbjct:  410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530

HSP 2 Score: 85.8853 bits (211), Expect = 1.105e-16
Identity = 45/120 (37.50%), Postives = 72/120 (60.00%), Query Frame = -1

Query:    4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363
            LL++ ++ G +E A ++  EM   G+ +D+ TYN LL    K  + D    +  EM A+ +SPN++TYSTMID Y+K G  D+A+++F E K+ G+  D V Y+ ++    K G  E A+
Sbjct:  305 LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424

HSP 3 Score: 72.0182 bits (175), Expect = 5.910e-12
Identity = 37/114 (32.46%), Postives = 67/114 (58.77%), Query Frame = -1

Query:   22 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 363
            LL    K  + + A +I  EM    +  +VVTY+ ++ GY K G+ D+   +F EMK   +  + ++Y+T++ +Y+K G ++EA+ V +E + +G++ D V Y+AL+    K G
Sbjct:  340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453

HSP 4 Score: 68.9366 bits (167), Expect = 6.987e-11
Identity = 35/120 (29.17%), Postives = 68/120 (56.67%), Query Frame = -1

Query:    7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGL-YDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363
            ++SI  +LG+ + A +I     + G    V  ++AL+  YG+ G   E  ++F+ MK   + PNL+TY+ +ID   KGG+ +   +++F +    G++ D + +++L+    + GL E+A
Sbjct:  199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYHLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318

HSP 5 Score: 68.5514 bits (166), Expect = 8.838e-11
Identity = 33/111 (29.73%), Postives = 63/111 (56.76%), Query Frame = -1

Query:    1 FEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 333
            F+  ++I  +M  +G++ D +T+N+LL    + G ++  R LF+EM  + +  ++ TY+T++D   KG   D A ++  E     +  +VV YS +ID   K G ++ A++
Sbjct:  280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390

HSP 6 Score: 66.2402 bits (160), Expect = 5.713e-10
Identity = 37/112 (33.04%), Postives = 67/112 (59.82%), Query Frame = -1

Query:   31 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAM-DVFREFKWAGLKADVVLYSALIDALC 363
            L+ +Y+K G ++EA+ I RE + +G++ DVV Y+AL+    K G  +   +L DEM  + + PN++TY+++ID + +    +  + DV R+    G + +    SA +DA+C
Sbjct:  480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDL---GKQKE----SANLDAMC 584

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy TrEMBL
Match: F6HZA9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g01660 PE=4 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 1.256e-61
Identity = 100/121 (82.64%), Postives = 115/121 (95.04%), Query Frame = -1

Query:    1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363
            LLSIYAKLGRFEEAL++C+EME SG+++D VTYNALLGGYGKQGKY+EV+ +F+EMKA+++ PNLLTYST+IDVYSKGGLY EAM+VFREFK AGLKADVVLYSALIDALCKNGLVESAVS
Sbjct:  402 LLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVS 522

HSP 2 Score: 83.5741 bits (205), Expect = 6.160e-16
Identity = 45/121 (37.19%), Postives = 71/121 (58.68%), Query Frame = -1

Query:    1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363
            LL++  + G +E A ++  EM   G+ +D+ TYN LL    K G+ D    +  EM  + + PN++TYST+ID Y+K G  DEA+++F E K+A +  D V Y+ L+    K G  E A++
Sbjct:  297 LLAVCGRGGLWEAARNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALN 417

HSP 3 Score: 80.8777 bits (198), Expect = 5.033e-15
Identity = 42/117 (35.90%), Postives = 70/117 (59.83%), Query Frame = -1

Query:   13 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVE 363
            LL    K G+ + A  I  EM    +  +VVTY+ ++ GY K G+ DE   LF+EMK   +  + ++Y+T++ +Y+K G ++EA++V +E + +G+K D V Y+AL+    K G  E
Sbjct:  332 LLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYE 448

HSP 4 Score: 73.9442 bits (180), Expect = 1.200e-12
Identity = 38/120 (31.67%), Postives = 70/120 (58.33%), Query Frame = -1

Query:    7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGL-YDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363
            ++SI  +LG+ E A ++     + G    V  ++AL+  YG+ G  DE   +F+ MK+  + PNL+TY+ +ID   KGG+ ++ A ++F E    G++ D + +++L+    + GL E+A
Sbjct:  191 MISILGRLGQVELAKNVFETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKSSGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAA 310

HSP 5 Score: 71.2478 bits (173), Expect = 9.593e-12
Identity = 37/111 (33.33%), Postives = 62/111 (55.86%), Query Frame = -1

Query:    1 FEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 333
            F  A +I  EM  +G++ D +T+N+LL   G+ G ++  R LF EM  + +  ++ TY+T++D   KGG  D A  +  E     +  +VV YS +ID   K G ++ A++
Sbjct:  272 FNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALN 382

HSP 6 Score: 65.855 bits (159), Expect = 6.564e-10
Identity = 28/86 (32.56%), Postives = 55/86 (63.95%), Query Frame = -1

Query:  106 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMD 363
            L+ +Y+K G ++EA+++ RE + +G++ DVV Y+AL+    K G  +   +  DEM  + + PN++TY+++ID + + G  +  +D
Sbjct:  472 LIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGSAECVID 557

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy TrEMBL
Match: A0A067HFZ0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g002814mg PE=4 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 1.432e-61
Identity = 102/121 (84.30%), Postives = 112/121 (92.56%), Query Frame = -1

Query:    1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363
            +LSIYAKLGRFEEAL +C+EME SG+R+D VTYNALLGGYGKQGKYDEVR +F++MKA  VSPNLLTYST+IDVYSKGGLY EAM +FREFK AGLKADVVLYSALIDALCKNGLVESAVS
Sbjct:  410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530

HSP 2 Score: 85.8853 bits (211), Expect = 1.176e-16
Identity = 45/120 (37.50%), Postives = 72/120 (60.00%), Query Frame = -1

Query:    4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363
            LL++ ++ G +E A ++  EM   G+ +D+ TYN LL    K  + D    +  EM A+ +SPN++TYSTMID Y+K G  D+A+++F E K+ G+  D V Y+ ++    K G  E A+
Sbjct:  305 LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424

HSP 3 Score: 72.0182 bits (175), Expect = 6.079e-12
Identity = 37/114 (32.46%), Postives = 67/114 (58.77%), Query Frame = -1

Query:   22 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 363
            LL    K  + + A +I  EM    +  +VVTY+ ++ GY K G+ D+   +F EMK   +  + ++Y+T++ +Y+K G ++EA+ V +E + +G++ D V Y+AL+    K G
Sbjct:  340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453

HSP 4 Score: 68.9366 bits (167), Expect = 6.646e-11
Identity = 35/120 (29.17%), Postives = 68/120 (56.67%), Query Frame = -1

Query:    7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGL-YDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363
            ++SI  +LG+ + A +I     + G    V  ++AL+  YG+ G   E  ++F+ MK   + PNL+TY+ +ID   KGG+ +   +++F +    G++ D + +++L+    + GL E+A
Sbjct:  199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYNLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318

HSP 5 Score: 68.5514 bits (166), Expect = 9.952e-11
Identity = 33/111 (29.73%), Postives = 63/111 (56.76%), Query Frame = -1

Query:    1 FEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 333
            F+  ++I  +M  +G++ D +T+N+LL    + G ++  R LF+EM  + +  ++ TY+T++D   KG   D A ++  E     +  +VV YS +ID   K G ++ A++
Sbjct:  280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390

HSP 6 Score: 66.2402 bits (160), Expect = 5.372e-10
Identity = 37/112 (33.04%), Postives = 67/112 (59.82%), Query Frame = -1

Query:   31 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAM-DVFREFKWAGLKADVVLYSALIDALC 363
            L+ +Y+K G ++EA+ I RE + +G++ DVV Y+AL+    K G  +   +L DEM  + + PN++TY+++ID + +    +  + DV R+    G + +    SA +DA+C
Sbjct:  480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDL---GKQKE----SANLDAMC 584

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy TrEMBL
Match: V4TBU5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10018807mg PE=4 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 1.505e-61
Identity = 102/121 (84.30%), Postives = 112/121 (92.56%), Query Frame = -1

Query:    1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363
            +LSIYAKLGRFEEAL +C+EME SG+R+D VTYNALLGGYGKQGKYDEVR +F++MKA  VSPNLLTYST+IDVYSKGGLY EAM +FREFK AGLKADVVLYSALIDALCKNGLVESAVS
Sbjct:  410 VLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQGKYDEVRRMFEQMKADCVSPNLLTYSTLIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVS 530

HSP 2 Score: 85.5001 bits (210), Expect = 1.222e-16
Identity = 45/120 (37.50%), Postives = 72/120 (60.00%), Query Frame = -1

Query:    4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363
            LL++ ++ G +E A ++  EM   G+ +D+ TYN LL    K  + D    +  EM A+ +SPN++TYSTMID Y+K G  D+A+++F E K+ G+  D V Y+ ++    K G  E A+
Sbjct:  305 LLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 424

HSP 3 Score: 72.0182 bits (175), Expect = 6.136e-12
Identity = 37/114 (32.46%), Postives = 67/114 (58.77%), Query Frame = -1

Query:   22 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 363
            LL    K  + + A +I  EM    +  +VVTY+ ++ GY K G+ D+   +F EMK   +  + ++Y+T++ +Y+K G ++EA+ V +E + +G++ D V Y+AL+    K G
Sbjct:  340 LLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALNMFSEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALLVCKEMESSGIRKDAVTYNALLGGYGKQG 453

HSP 4 Score: 68.9366 bits (167), Expect = 6.584e-11
Identity = 35/120 (29.17%), Postives = 68/120 (56.67%), Query Frame = -1

Query:    7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGL-YDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363
            ++SI  +LG+ + A +I     + G    V  ++AL+  YG+ G   E  ++F+ MK   + PNL+TY+ +ID   KGG+ +   +++F +    G++ D + +++L+    + GL E+A
Sbjct:  199 MISILGRLGKVDLAKNIFETALNEGYGNTVYAFSALISAYGRSGYCQEAISVFNSMKRYHLKPNLVTYNAVIDACGKGGVDFKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAA 318

HSP 5 Score: 68.5514 bits (166), Expect = 9.859e-11
Identity = 33/111 (29.73%), Postives = 63/111 (56.76%), Query Frame = -1

Query:    1 FEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 333
            F+  ++I  +M  +G++ D +T+N+LL    + G ++  R LF+EM  + +  ++ TY+T++D   KG   D A ++  E     +  +VV YS +ID   K G ++ A++
Sbjct:  280 FKHVVEIFDDMLRNGVQPDRITFNSLLAVCSRGGLWEAARNLFNEMVHRGIDQDIFTYNTLLDAICKGAQMDLAFEIMAEMPAKNISPNVVTYSTMIDGYAKAGRLDDALN 390

HSP 6 Score: 66.2402 bits (160), Expect = 5.525e-10
Identity = 37/112 (33.04%), Postives = 67/112 (59.82%), Query Frame = -1

Query:   31 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAM-DVFREFKWAGLKADVVLYSALIDALC 363
            L+ +Y+K G ++EA+ I RE + +G++ DVV Y+AL+    K G  +   +L DEM  + + PN++TY+++ID + +    +  + DV R+    G + +    SA +DA+C
Sbjct:  480 LIDVYSKGGLYKEAMQIFREFKQAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATTECTVDDVERDL---GKQKE----SANLDAMC 584

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy TrEMBL
Match: A0A067JZS9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14049 PE=4 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 5.406e-61
Identity = 100/120 (83.33%), Postives = 112/120 (93.33%), Query Frame = -1

Query:    4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363
            LLSIY+KLGRFEEALD+C+EME+SG+R+DVVTYNALLGGYGKQ KYDEVR +F+EMK   +SPN+LTYST+IDVYSKGG Y EAM+VFREFK AGLKADVVLYSALIDALCKNGLVESAV
Sbjct:  408 LLSIYSKLGRFEEALDVCKEMENSGIRKDVVTYNALLGGYGKQCKYDEVRKVFEEMKGACISPNILTYSTLIDVYSKGGRYKEAMEVFREFKQAGLKADVVLYSALIDALCKNGLVESAV 527

HSP 2 Score: 84.3445 bits (207), Expect = 3.619e-16
Identity = 44/120 (36.67%), Postives = 71/120 (59.17%), Query Frame = -1

Query:    4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363
            LL++ ++ G +E A  +  EM + G+ +D+ TYN LL    K G+ D    +  EM  + + PN++TYSTMID Y+K G  D+A+++F E K+ G+  D + Y+ L+    K G  E A+
Sbjct:  303 LLAVCSRGGLWEAARGLFSEMVNRGIAQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPGKNILPNVVTYSTMIDGYAKAGRLDDALNLFSEMKFLGIGLDRISYNTLLSIYSKLGRFEEAL 422

HSP 3 Score: 84.3445 bits (207), Expect = 3.653e-16
Identity = 42/120 (35.00%), Postives = 76/120 (63.33%), Query Frame = -1

Query:    7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQG-KYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363
            L+S Y +     EA+ +   M+D G++ ++VTYNA++   GK G ++++V  +FDEM    V P+ +T+++++ V S+GGL++ A  +F E    G+  D+  Y+ L+DA+CK G ++ A
Sbjct:  232 LISAYGRSCYCNEAIKVFDSMKDYGLKPNLVTYNAVIDACGKGGVEFNKVVEIFDEMLKNGVQPDRITFNSLLAVCSRGGLWEAARGLFSEMVNRGIAQDIFTYNTLLDAVCKGGQMDLA 351

HSP 4 Score: 80.4925 bits (197), Expect = 6.407e-15
Identity = 40/107 (37.38%), Postives = 68/107 (63.55%), Query Frame = -1

Query:   43 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALI 363
            LL    K G+ + A +I  EM    +  +VVTY+ ++ GY K G+ D+   LF EMK   +  + ++Y+T++ +YSK G ++EA+DV +E + +G++ DVV Y+AL+
Sbjct:  338 LLDAVCKGGQMDLAFEIMSEMPGKNILPNVVTYSTMIDGYAKAGRLDDALNLFSEMKFLGIGLDRISYNTLLSIYSKLGRFEEALDVCKEMENSGIRKDVVTYNALL 444

HSP 5 Score: 71.633 bits (174), Expect = 7.888e-12
Identity = 35/111 (31.53%), Postives = 64/111 (57.66%), Query Frame = -1

Query:    1 FEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 333
            F + ++I  EM  +G++ D +T+N+LL    + G ++  R LF EM  + ++ ++ TY+T++D   KGG  D A ++  E     +  +VV YS +ID   K G ++ A++
Sbjct:  278 FNKVVEIFDEMLKNGVQPDRITFNSLLAVCSRGGLWEAARGLFSEMVNRGIAQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPGKNILPNVVTYSTMIDGYAKAGRLDDALN 388

HSP 6 Score: 65.0846 bits (157), Expect = 1.362e-9
Identity = 35/120 (29.17%), Postives = 66/120 (55.00%), Query Frame = -1

Query:    7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGL-YDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363
            ++S   +LG+ E A  +       G    V  ++AL+  YG+    +E   +FD MK   + PNL+TY+ +ID   KGG+ +++ +++F E    G++ D + +++L+    + GL E+A
Sbjct:  197 MISTLGRLGKVELAKAVFETALSEGYGNTVYAFSALISAYGRSCYCNEAIKVFDSMKDYGLKPNLVTYNAVIDACGKGGVEFNKVVEIFDEMLKNGVQPDRITFNSLLAVCSRGGLWEAA 316

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy TrEMBL
Match: B9RNC1_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_1346530 PE=4 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 2.676e-60
Identity = 98/121 (80.99%), Postives = 114/121 (94.21%), Query Frame = -1

Query:    1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363
            LLS+YAKLGRFE+ALD+C+EME++G+R+DVVTYNALL GYGKQ +YDEVR +F+EMK  +VSPNLLTYST+IDVYSKGGLY EAM+VFREFK AGLKADVVLYSALIDALCKNGLVES+V+
Sbjct:  407 LLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAGLKADVVLYSALIDALCKNGLVESSVT 527

HSP 2 Score: 83.1889 bits (204), Expect = 8.438e-16
Identity = 45/120 (37.50%), Postives = 70/120 (58.33%), Query Frame = -1

Query:    4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363
            LL++ ++ G +E A  +   M D G+ +D+ TYN LL    K G+ D    +  EM  + + PN++TYSTMID Y+K G  D+A+++F E K+ G+  D V Y+ L+    K G  E A+
Sbjct:  302 LLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQAL 421

HSP 3 Score: 79.7221 bits (195), Expect = 1.393e-14
Identity = 40/107 (37.38%), Postives = 69/107 (64.49%), Query Frame = -1

Query:   43 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALI 363
            LL    K G+ + A +I  EM    +  +VVTY+ ++ GY K G+ D+   +F+EMK   V  + ++Y+T++ VY+K G +++A+DV +E + AG++ DVV Y+AL+
Sbjct:  337 LLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALL 443

HSP 4 Score: 78.9518 bits (193), Expect = 2.514e-14
Identity = 40/120 (33.33%), Postives = 74/120 (61.67%), Query Frame = -1

Query:    7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQG-KYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363
            L+S Y + G   EA+ +   M+ +G+  ++VTYNA++   GK G ++ +V  +FD M +  V P+ +T+++++ V S+GGL++ A  +F      G+  D+  Y+ L+DA+CK G ++ A
Sbjct:  231 LISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNAVIDACGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLA 350

HSP 5 Score: 66.2402 bits (160), Expect = 5.177e-10
Identity = 35/120 (29.17%), Postives = 67/120 (55.83%), Query Frame = -1

Query:    7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGL-YDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363
            ++S   +LG+ E A  +       G  + V  ++AL+  YG+ G  +E   +FD MK+  + PNL+TY+ +ID   KGG+ + + +++F      G++ D + +++L+    + GL E+A
Sbjct:  196 MISTLGRLGKVELAKAVFDTALKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNAVIDACGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAA 315

HSP 6 Score: 64.6994 bits (156), Expect = 1.529e-9
Identity = 33/111 (29.73%), Postives = 62/111 (55.86%), Query Frame = -1

Query:    1 FEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 333
            F++ ++I   M  +G++ D +T+N+LL    + G ++  R LF  M  + +  ++ TY+T++D   KGG  D A ++  E     +  +VV YS +ID   K G ++ A++
Sbjct:  277 FKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALN 387

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy TrEMBL
Match: W9QXX4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_009725 PE=4 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 7.062e-60
Identity = 99/121 (81.82%), Postives = 111/121 (91.74%), Query Frame = -1

Query:    1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363
            LLSIYAKLGRFEEAL +C+EME SG+ RDVV+YNALLGGYGKQGKYDEV+ ++ +MKA  VSPNLLTYST+IDVYSKGGLY EAM+VFREFK AGLKADVVLYS LI+ALCKNG+VESAVS
Sbjct:  407 LLSIYAKLGRFEEALKVCKEMESSGIVRDVVSYNALLGGYGKQGKYDEVKRMYQDMKADHVSPNLLTYSTLIDVYSKGGLYREAMEVFREFKQAGLKADVVLYSELINALCKNGMVESAVS 527

HSP 2 Score: 90.1225 bits (222), Expect = 3.339e-18
Identity = 45/120 (37.50%), Postives = 76/120 (63.33%), Query Frame = -1

Query:    7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQG-KYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363
            L+S Y + G +EEA  +   M+DSG++ ++VTYNA++   GK G ++  V  +FDEM    V P+ +TY++++ V S+GGL++ A  +F E     +  D+  Y+ L+DA+CK G ++ A
Sbjct:  231 LISAYGRSGYWEEARRVVESMKDSGLKPNLVTYNAVIDACGKGGAEFKRVVEIFDEMLRNGVQPDRITYNSLLAVCSRGGLWEAARSLFSEMVERQIDQDIYTYNTLLDAICKGGQMDLA 350

HSP 3 Score: 87.0409 bits (214), Expect = 4.622e-17
Identity = 45/120 (37.50%), Postives = 73/120 (60.83%), Query Frame = -1

Query:    4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363
            LL++ ++ G +E A  +  EM +  + +D+ TYN LL    K G+ D  R +  EM ++K+ PN++TYSTMID Y+K G  ++A+++F E K+  +  D VLY+ L+    K G  E A+
Sbjct:  302 LLAVCSRGGLWEAARSLFSEMVERQIDQDIYTYNTLLDAICKGGQMDLARQIMSEMPSKKILPNVVTYSTMIDGYAKAGRLEDALNLFNEMKYLAIGLDRVLYNTLLSIYAKLGRFEEAL 421

HSP 4 Score: 75.0998 bits (183), Expect = 4.845e-13
Identity = 40/122 (32.79%), Postives = 69/122 (56.56%), Query Frame = -1

Query:    1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGL-YDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363
            ++S   +LG+ E A D+      +G    V TY+AL+  YG+ G ++E R + + MK   + PNL+TY+ +ID   KGG  +   +++F E    G++ D + Y++L+    + GL E+A S
Sbjct:  196 MISTLGRLGKVELARDVFETALFAGYGNTVYTYSALISAYGRSGYWEEARRVVESMKDSGLKPNLVTYNAVIDACGKGGAEFKRVVEIFDEMLRNGVQPDRITYNSLLAVCSRGGLWEAARS 317

HSP 5 Score: 72.4034 bits (176), Expect = 3.777e-12
Identity = 37/111 (33.33%), Postives = 64/111 (57.66%), Query Frame = -1

Query:    1 FEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 333
            F+  ++I  EM  +G++ D +TYN+LL    + G ++  R+LF EM  +++  ++ TY+T++D   KGG  D A  +  E     +  +VV YS +ID   K G +E A++
Sbjct:  277 FKRVVEIFDEMLRNGVQPDRITYNSLLAVCSRGGLWEAARSLFSEMVERQIDQDIYTYNTLLDAICKGGQMDLARQIMSEMPSKKILPNVVTYSTMIDGYAKAGRLEDALN 387

HSP 6 Score: 72.0182 bits (175), Expect = 5.832e-12
Identity = 39/114 (34.21%), Postives = 67/114 (58.77%), Query Frame = -1

Query:   22 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 363
            LL    K G+ + A  I  EM    +  +VVTY+ ++ GY K G+ ++   LF+EMK   +  + + Y+T++ +Y+K G ++EA+ V +E + +G+  DVV Y+AL+    K G
Sbjct:  337 LLDAICKGGQMDLARQIMSEMPSKKILPNVVTYSTMIDGYAKAGRLEDALNLFNEMKYLAIGLDRVLYNTLLSIYAKLGRFEEALKVCKEMESSGIVRDVVSYNALLGGYGKQG 450

HSP 7 Score: 66.6254 bits (161), Expect = 4.319e-10
Identity = 28/85 (32.94%), Postives = 53/85 (62.35%), Query Frame = -1

Query:  109 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAM 363
            L+ +Y+K G + EA+++ RE + +G++ DVV Y+ L+    K G  +   +L DEM  + + PN++TY+++ID + +    D A+
Sbjct:  477 LIDVYSKGGLYREAMEVFREFKQAGLKADVVLYSELINALCKNGMVESAVSLLDEMTKEGIMPNVITYNSIIDAFGRPATADSAL 561

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy TrEMBL
Match: A0A087HLC9_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA1G057100 PE=4 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 2.166e-57
Identity = 95/121 (78.51%), Postives = 110/121 (90.91%), Query Frame = -1

Query:    1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363
            LLSI+AKLG+FEEALDI +EM  +G+R+D VTYNALLGGYGKQG+YDEV+++F EMK + V PNLLTYST+IDVYSKGGLY EAM++FREFK  GL+ADVVLYSALIDALCKNGLVESAVS
Sbjct:  399 LLSIFAKLGKFEEALDIVKEMASAGIRKDAVTYNALLGGYGKQGRYDEVKSVFAEMKQEHVLPNLLTYSTLIDVYSKGGLYKEAMEIFREFKSVGLRADVVLYSALIDALCKNGLVESAVS 519

HSP 2 Score: 89.7373 bits (221), Expect = 5.045e-18
Identity = 41/120 (34.17%), Postives = 79/120 (65.83%), Query Frame = -1

Query:    7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQG-KYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363
            ++S Y + G +E+A+ + + M+  G+R ++VTYNA++   GK G ++ +V   FDEM+   V P+ +T+++++ V S+GG ++ A ++F E    G++ D+  Y+ L+DA+CK G ++ A
Sbjct:  223 IISAYGRSGYYEDAIKVFKSMKSYGLRPNLVTYNAVIDACGKGGMEFKQVAEFFDEMQRNGVQPDRITFNSLLAVCSRGGSWEAARNLFDEMLNRGIEQDIFTYNTLLDAICKGGQMDLA 342

HSP 3 Score: 83.9593 bits (206), Expect = 4.684e-16
Identity = 42/120 (35.00%), Postives = 72/120 (60.00%), Query Frame = -1

Query:    4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363
            LL++ ++ G +E A ++  EM + G+ +D+ TYN LL    K G+ D    +  +M  + + PN++TYST+ID Y+K G +++A+ +F E K+ G+  D V Y+ L+    K G  E A+
Sbjct:  294 LLAVCSRGGSWEAARNLFDEMLNRGIEQDIFTYNTLLDAICKGGQMDLAFEILAQMPTKNIMPNVVTYSTVIDGYAKAGRFNDALSLFGEMKYLGIPLDRVSYNTLLSIFAKLGKFEEAL 413

HSP 4 Score: 78.1814 bits (191), Expect = 4.823e-14
Identity = 37/114 (32.46%), Postives = 70/114 (61.40%), Query Frame = -1

Query:   22 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 363
            LL    K G+ + A +I  +M    +  +VVTY+ ++ GY K G++++  +LF EMK   +  + ++Y+T++ +++K G ++EA+D+ +E   AG++ D V Y+AL+    K G
Sbjct:  329 LLDAICKGGQMDLAFEILAQMPTKNIMPNVVTYSTVIDGYAKAGRFNDALSLFGEMKYLGIPLDRVSYNTLLSIFAKLGKFEEALDIVKEMASAGIRKDAVTYNALLGGYGKQG 442

HSP 5 Score: 72.7886 bits (177), Expect = 2.791e-12
Identity = 35/111 (31.53%), Postives = 62/111 (55.86%), Query Frame = -1

Query:    1 FEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 333
            F++  +   EM+ +G++ D +T+N+LL    + G ++  R LFDEM  + +  ++ TY+T++D   KGG  D A ++  +     +  +VV YS +ID   K G    A+S
Sbjct:  269 FKQVAEFFDEMQRNGVQPDRITFNSLLAVCSRGGSWEAARNLFDEMLNRGIEQDIFTYNTLLDAICKGGQMDLAFEILAQMPTKNIMPNVVTYSTVIDGYAKAGRFNDALS 379

HSP 6 Score: 68.9366 bits (167), Expect = 6.686e-11
Identity = 32/87 (36.78%), Postives = 55/87 (63.22%), Query Frame = -1

Query:  103 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDV 363
            L+ +Y+K G ++EA++I RE +  G+R DVV Y+AL+    K G  +   +L DEM  + +SPN++TY++MID + +    +   D+
Sbjct:  469 LIDVYSKGGLYKEAMEIFREFKSVGLRADVVLYSALIDALCKNGLVESAVSLLDEMTKEGISPNVVTYNSMIDSFGRSSTMECLADI 555

HSP 7 Score: 61.2326 bits (147), Expect = 2.336e-8
Identity = 32/120 (26.67%), Postives = 64/120 (53.33%), Query Frame = -1

Query:    7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGL-YDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363
            ++S   +LG+   A  +       G    V  ++A++  YG+ G Y++   +F  MK+  + PNL+TY+ +ID   KGG+ + +  + F E +  G++ D + +++L+    + G  E+A
Sbjct:  188 MISTLGRLGKVGIAKRVFETALADGYGNTVYAFSAIISAYGRSGYYEDAIKVFKSMKSYGLRPNLVTYNAVIDACGKGGMEFKQVAEFFDEMQRNGVQPDRITFNSLLAVCSRGGSWEAA 307

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy TrEMBL
Match: V4KY93_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10006755mg PE=4 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 1.953e-56
Identity = 95/121 (78.51%), Postives = 109/121 (90.08%), Query Frame = -1

Query:    1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363
            L+SIYAKLGRFEEALDI +EM  +G+R+D VTYNALLGGYGK  KYDEV+++F EMK ++V PNLLTYST+IDVYSKGGLY EAM++FREFK  GL+ADVVLYSALIDALCKNGLVESAVS
Sbjct:  423 LVSIYAKLGRFEEALDIVKEMAAAGIRKDAVTYNALLGGYGKHEKYDEVKSVFAEMKQERVLPNLLTYSTLIDVYSKGGLYKEAMEIFREFKSVGLRADVVLYSALIDALCKNGLVESAVS 543

HSP 2 Score: 89.3521 bits (220), Expect = 6.616e-18
Identity = 41/120 (34.17%), Postives = 78/120 (65.00%), Query Frame = -1

Query:    7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQG-KYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363
            ++S Y + G  E+A+ +   M+  G+R ++VTYNA++   GK G ++ +V   FDEM+  +V P+ +T+++++ V S+GG ++ A ++F E    G++ D+  Y+ L+DA+CK G ++ A
Sbjct:  247 IISAYGRSGYHEDAIKVFSSMKGHGLRPNLVTYNAVIDACGKGGMEFKQVAEFFDEMQRNRVQPDRITFNSLLAVCSRGGSWEAARNLFDEMLNRGIEQDIFTYNTLLDAICKGGQMDLA 366

HSP 3 Score: 85.1149 bits (209), Expect = 2.181e-16
Identity = 43/120 (35.83%), Postives = 73/120 (60.83%), Query Frame = -1

Query:    4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363
            LL++ ++ G +E A ++  EM + G+ +D+ TYN LL    K G+ D    +  +M A+ + PN++TYST+ID Y+K G +++A+ +F E K+ G+  D V Y+ L+    K G  E A+
Sbjct:  318 LLAVCSRGGSWEAARNLFDEMLNRGIEQDIFTYNTLLDAICKGGQMDLAFEILAQMPAKNIMPNVVTYSTVIDGYAKAGRFNDALTLFGEMKYLGIPLDRVSYNTLVSIYAKLGRFEEAL 437

HSP 4 Score: 77.411 bits (189), Expect = 7.886e-14
Identity = 37/113 (32.74%), Postives = 69/113 (61.06%), Query Frame = -1

Query:   25 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKN 363
            LL    K G+ + A +I  +M    +  +VVTY+ ++ GY K G++++   LF EMK   +  + ++Y+T++ +Y+K G ++EA+D+ +E   AG++ D V Y+AL+    K+
Sbjct:  353 LLDAICKGGQMDLAFEILAQMPAKNIMPNVVTYSTVIDGYAKAGRFNDALTLFGEMKYLGIPLDRVSYNTLVSIYAKLGRFEEALDIVKEMAAAGIRKDAVTYNALLGGYGKH 465

HSP 5 Score: 69.707 bits (169), Expect = 4.156e-11
Identity = 32/87 (36.78%), Postives = 55/87 (63.22%), Query Frame = -1

Query:  103 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDV 363
            L+ +Y+K G ++EA++I RE +  G+R DVV Y+AL+    K G  +   +L DEM  + +SPN++TY++MID + +    +   D+
Sbjct:  493 LIDVYSKGGLYKEAMEIFREFKSVGLRADVVLYSALIDALCKNGLVESAVSLLDEMTKEGISPNVVTYNSMIDAFGRSATTECLADI 579

HSP 6 Score: 68.5514 bits (166), Expect = 9.954e-11
Identity = 33/111 (29.73%), Postives = 61/111 (54.95%), Query Frame = -1

Query:    1 FEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 333
            F++  +   EM+ + ++ D +T+N+LL    + G ++  R LFDEM  + +  ++ TY+T++D   KGG  D A ++  +     +  +VV YS +ID   K G    A++
Sbjct:  293 FKQVAEFFDEMQRNRVQPDRITFNSLLAVCSRGGSWEAARNLFDEMLNRGIEQDIFTYNTLLDAICKGGQMDLAFEILAQMPAKNIMPNVVTYSTVIDGYAKAGRFNDALT 403

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy Swiss-Prot
Match: PP178_ARATH (Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidopsis thaliana GN=At2g31400 PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.203e-57
Identity = 95/121 (78.51%), Postives = 106/121 (87.60%), Query Frame = -1

Query:    1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363
            LLSIY K+GR EEALDI REM   G+++DVVTYNALLGGYGKQGKYDEV+ +F EMK + V PNLLTYST+ID YSKGGLY EAM++FREFK AGL+ADVVLYSALIDALCKNGLV SAVS
Sbjct:  450 LLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVS 570

HSP 2 Score: 91.2781 bits (225), Expect = 1.432e-20
Identity = 44/120 (36.67%), Postives = 78/120 (65.00%), Query Frame = -1

Query:    7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQG-KYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363
            L+S Y + G  EEA+ +   M++ G+R ++VTYNA++   GK G ++ +V   FDEM+   V P+ +T+++++ V S+GGL++ A ++F E     ++ DV  Y+ L+DA+CK G ++ A
Sbjct:  274 LISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLA 393

HSP 3 Score: 81.6481 bits (200), Expect = 3.166e-17
Identity = 40/120 (33.33%), Postives = 73/120 (60.83%), Query Frame = -1

Query:    4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363
            LL++ ++ G +E A ++  EM +  + +DV +YN LL    K G+ D    +  +M  +++ PN+++YST+ID ++K G +DEA+++F E ++ G+  D V Y+ L+    K G  E A+
Sbjct:  345 LLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEAL 464

HSP 4 Score: 80.8777 bits (198), Expect = 7.464e-17
Identity = 39/114 (34.21%), Postives = 69/114 (60.53%), Query Frame = -1

Query:   22 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 363
            LL    K G+ + A +I  +M    +  +VV+Y+ ++ G+ K G++DE   LF EM+   ++ + ++Y+T++ +Y+K G  +EA+D+ RE    G+K DVV Y+AL+    K G
Sbjct:  380 LLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQG 493

HSP 5 Score: 71.2478 bits (173), Expect = 1.435e-13
Identity = 32/86 (37.21%), Postives = 54/86 (62.79%), Query Frame = -1

Query:  106 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMD 363
            L+  Y+K G ++EA++I RE + +G+R DVV Y+AL+    K G      +L DEM  + +SPN++TY+++ID + +    D + D
Sbjct:  520 LIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSAD 605

HSP 6 Score: 70.0922 bits (170), Expect = 2.991e-13
Identity = 33/111 (29.73%), Postives = 63/111 (56.76%), Query Frame = -1

Query:    1 FEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 333
            F++      EM+ +G++ D +T+N+LL    + G ++  R LFDEM  +++  ++ +Y+T++D   KGG  D A ++  +     +  +VV YS +ID   K G  + A++
Sbjct:  320 FKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALN 430

HSP 7 Score: 64.6994 bits (156), Expect = 2.156e-11
Identity = 34/120 (28.33%), Postives = 64/120 (53.33%), Query Frame = -1

Query:    7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGL-YDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363
            ++S   + G+   A  I       G    V  ++AL+  YG+ G ++E  ++F+ MK   + PNL+TY+ +ID   KGG+ + +    F E +  G++ D + +++L+    + GL E+A
Sbjct:  239 MISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAA 358

HSP 8 Score: 53.9138 bits (128), Expect = 8.803e-8
Identity = 26/82 (31.71%), Postives = 46/82 (56.10%), Query Frame = -1

Query:   19 NALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGL 264
            +A++   G+ GK    + +F+   A      +  +S +I  Y + GL++EA+ VF   K  GL+ ++V Y+A+IDA  K G+
Sbjct:  237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGM 318

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy Swiss-Prot
Match: PP143_ARATH (Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.743e-21
Identity = 44/120 (36.67%), Postives = 72/120 (60.00%), Query Frame = -1

Query:    4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363
            ++    K G  E A  +  EM+  G+  D VTYN+++ G+GK G+ D+    F+EMK     P+++TY+ +I+ + K G     ++ +RE K  GLK +VV YS L+DA CK G+++ A+
Sbjct:  268 MIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAI 387

HSP 2 Score: 80.8777 bits (198), Expect = 4.897e-17
Identity = 42/114 (36.84%), Postives = 67/114 (58.77%), Query Frame = -1

Query:   22 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 363
            LL  +AKLG+ ++     ++M  +G R  V TYN ++    K+G  +  R LF+EMK + + P+ +TY++MID + K G  D+ +  F E K    + DV+ Y+ALI+  CK G
Sbjct:  233 LLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFG 346

HSP 3 Score: 79.337 bits (194), Expect = 1.832e-16
Identity = 39/115 (33.91%), Postives = 66/115 (57.39%), Query Frame = -1

Query:    7 YAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 351
            + K+GR ++ +    EM+D     DV+TYNAL+  + K GK       + EMK   + PN+++YST++D + K G+  +A+  + + +  GL  +   Y++LIDA CK G +  A
Sbjct:  307 FGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDA 421

HSP 4 Score: 70.8626 bits (172), Expect = 1.732e-13
Identity = 35/111 (31.53%), Postives = 64/111 (57.66%), Query Frame = -1

Query:   31 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALC 363
            L++ + K G+    L+  REM+ +G++ +VV+Y+ L+  + K+G   +    + +M+   + PN  TY+++ID   K G   +A  +  E    G++ +VV Y+ALID LC
Sbjct:  338 LINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLC 448

HSP 5 Score: 69.707 bits (169), Expect = 4.286e-13
Identity = 37/120 (30.83%), Postives = 62/120 (51.67%), Query Frame = -1

Query:    4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363
            L+  + K    + AL++  E++  G++ D++ Y   + G     K +  + + +EMK   +  N L Y+T++D Y K G   E + +  E K   ++  VV +  LID LCKN LV  AV
Sbjct:  478 LIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAV 597

HSP 6 Score: 69.3218 bits (168), Expect = 5.850e-13
Identity = 40/121 (33.06%), Postives = 60/121 (49.59%), Query Frame = -1

Query:    1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363
            L S+   LG  EEA+    +M+   +     + N LL  + K GK D+V+  F +M      P + TY+ MID   K G  + A  +F E K+ GL  D V Y+++ID   K G ++  V 
Sbjct:  198 LFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVC 318

HSP 7 Score: 68.9366 bits (167), Expect = 6.675e-13
Identity = 39/119 (32.77%), Postives = 60/119 (50.42%), Query Frame = -1

Query:    7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363
            L+    K+G   +A  +  EM   G+  +VVTY AL+ G     +  E   LF +M    V PNL +Y+ +I  + K    D A+++  E K  G+K D++LY   I  LC    +E+A
Sbjct:  408 LIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAA 526

HSP 8 Score: 66.6254 bits (161), Expect = 3.695e-12
Identity = 37/117 (31.62%), Postives = 62/117 (52.99%), Query Frame = -1

Query:    1 AKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKW-AGLKADVVLYSALIDALCKNGLVESAVS 348
              L + E A  +  EM++ G++ + + Y  L+  Y K G   E   L DEMK   +   ++T+  +ID   K  L  +A+D F       GL+A+  +++A+ID LCK+  VE+A +
Sbjct:  518 CSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATT 634

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy Swiss-Prot
Match: PP442_ARATH (Pentatricopeptide repeat-containing protein At5g61990, mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.015e-21
Identity = 46/121 (38.02%), Postives = 73/121 (60.33%), Query Frame = -1

Query:    1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363
            L++ ++KLG  ++A  I  EM + G+  +V+ YN LLGG+ + G+ ++ + L DEM  + + PN +TY T+ID Y K G   EA  +F E K  GL  D  +Y+ L+D  C+   VE A++
Sbjct:  633 LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAIT 753

HSP 2 Score: 78.1814 bits (191), Expect = 5.121e-16
Identity = 39/119 (32.77%), Postives = 66/119 (55.46%), Query Frame = -1

Query:    7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363
            L++ Y K G+  EA    R M D G+  D  TY  L+ G  K  K D+   +F EM+ + ++P++ +Y  +I+ +SK G   +A  +F E    GL  +V++Y+ L+   C++G +E A
Sbjct:  563 LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKA 681

HSP 3 Score: 72.4034 bits (176), Expect = 5.385e-14
Identity = 32/105 (30.48%), Postives = 60/105 (57.14%), Query Frame = -1

Query:   22 RFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 336
            + ++A +I REM   G+  DV +Y  L+ G+ K G   +  ++FDEM  + ++PN++ Y+ ++  + + G  ++A ++  E    GL  + V Y  +ID  CK+G
Sbjct:  607 KVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSG 711

HSP 4 Score: 69.3218 bits (168), Expect = 5.873e-13
Identity = 37/121 (30.58%), Postives = 61/121 (50.41%), Query Frame = -1

Query:    1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363
            L+  + +  RF +A+ + +EM++ G+  D+  YN+L+ G  K  + DE R+   EM    + PN  TY   I  Y +   +  A    +E +  G+  + VL + LI+  CK G V  A S
Sbjct:  458 LIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACS 578

HSP 5 Score: 63.5438 bits (153), Expect = 5.187e-11
Identity = 35/124 (28.23%), Postives = 65/124 (52.42%), Query Frame = -1

Query:    4 LLSIYAKLGRFEEALDICREMEDSGMRR----DVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363
            L++   K G+ E   ++   + D    R    + VTYN ++    K+G  +  + LF +M+   + P ++TY+++++ Y K G   E   VF E   AG++ D ++YS +I+A  K G+   A+
Sbjct:  772 LINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKAL 895

HSP 6 Score: 58.5362 bits (140), Expect = 2.338e-9
Identity = 36/117 (30.77%), Postives = 60/117 (51.28%), Query Frame = -1

Query:   13 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVE 363
            LL  + + G  E+A ++  EM   G+  + VTY  ++ GY K G   E   LFDEMK + + P+   Y+T++D   +    + A+ +F   K  G  +    ++ALI+ + K G  E
Sbjct:  668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK-KGCASSTAPFNALINWVFKFGKTE 783

HSP 7 Score: 57.3806 bits (137), Expect = 5.325e-9
Identity = 31/99 (31.31%), Postives = 50/99 (50.51%), Query Frame = -1

Query:   43 GRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALI 339
            G  + A +I +EM  SG R +VV Y  L+  + +  ++ +   +  EMK Q ++P++  Y+++I   SK    DEA     E    GLK +   Y A I
Sbjct:  431 GDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI 529

HSP 8 Score: 54.299 bits (129), Expect = 6.350e-8
Identity = 33/114 (28.95%), Postives = 55/114 (48.25%), Query Frame = -1

Query:    7 AKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 348
            +K  R +EA     EM ++G++ +  TY A + GY +  ++        EM+   V PN +  + +I+ Y K G   EA   +R     G+  D   Y+ L++ L KN  V+ A
Sbjct:  498 SKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDA 611

HSP 9 Score: 52.7582 bits (125), Expect = 1.975e-7
Identity = 31/121 (25.62%), Postives = 56/121 (46.28%), Query Frame = -1

Query:    1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363
            L+  Y +     +  ++  EM+   +     TY  ++ G    G  D    +  EM A    PN++ Y+T+I  + +   + +AM V +E K  G+  D+  Y++LI  L K   ++ A S
Sbjct:  388 LIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508

HSP 10 Score: 52.373 bits (124), Expect = 2.679e-7
Identity = 34/121 (28.10%), Postives = 58/121 (47.93%), Query Frame = -1

Query:    1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363
             +S Y +   F  A    +EM + G+  + V    L+  Y K+GK  E  + +  M  Q +  +  TY+ +++   K    D+A ++FRE +  G+  DV  Y  LI+   K G ++ A S
Sbjct:  528 FISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASS 648

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy Swiss-Prot
Match: PP413_ARATH (Pentatricopeptide repeat-containing protein At5g42310, mitochondrial OS=Arabidopsis thaliana GN=At5g42310 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.904e-21
Identity = 44/121 (36.36%), Postives = 74/121 (61.16%), Query Frame = -1

Query:    1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363
            L+  + K GR   A ++   ME  G      TYN ++  YG Q ++D+++ L  +MK+Q + PN++T++T++DVY K G +++A++   E K  GLK    +Y+ALI+A  + GL E AV+
Sbjct:  485 LIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVN 605

HSP 2 Score: 69.707 bits (169), Expect = 3.829e-13
Identity = 35/114 (30.70%), Postives = 60/114 (52.63%), Query Frame = -1

Query:   22 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 363
            L+  Y   GR+E A  + +EME   ++ +   ++ LL G+  +G++ +   +  EMK+  V P+   Y+ +ID + K    D AM  F      G++ D V ++ LID  CK+G
Sbjct:  380 LIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHG 493

HSP 3 Score: 68.9366 bits (167), Expect = 6.140e-13
Identity = 35/112 (31.25%), Postives = 62/112 (55.36%), Query Frame = -1

Query:   28 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCK 363
            L+ +Y K GRF +A++   EM+  G++     YNAL+  Y ++G  ++    F  M +  + P+LL  +++I+ + +     EA  V +  K  G+K DVV Y+ L+ AL +
Sbjct:  555 LVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIR 666

HSP 4 Score: 67.0106 bits (162), Expect = 2.747e-12
Identity = 36/121 (29.75%), Postives = 61/121 (50.41%), Query Frame = -1

Query:    1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363
            LL  Y K G  ++A  +  EME  G+  D  TY+ L+  Y   G+++  R +  EM+A  V PN   +S ++  +   G + +   V +E K  G+K D   Y+ +ID   K   ++ A++
Sbjct:  345 LLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMT 465

HSP 5 Score: 64.3142 bits (155), Expect = 2.536e-11
Identity = 35/107 (32.71%), Postives = 58/107 (54.21%), Query Frame = -1

Query:   43 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALI 363
            ++S  A  GR  EA  +  E+  SG++     YNALL GY K G   +  ++  EM+ + VSP+  TYS +ID Y   G ++ A  V +E +   ++ +  ++S L+
Sbjct:  310 IISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLL 416

HSP 6 Score: 62.7734 bits (151), Expect = 7.213e-11
Identity = 30/110 (27.27%), Postives = 65/110 (59.09%), Query Frame = -1

Query:   34 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDAL 363
            +++ Y    R+++   +  +M+  G+  +VVT+  L+  YGK G++++     +EMK+  + P+   Y+ +I+ Y++ GL ++A++ FR     GLK  ++  ++LI+A 
Sbjct:  520 MINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAF 629

HSP 7 Score: 55.0694 bits (131), Expect = 2.944e-8
Identity = 27/109 (24.77%), Postives = 57/109 (52.29%), Query Frame = -1

Query:   37 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDA 363
            LL+ +   G +++   + +EM+  G++ D   YN ++  +GK    D     FD M ++ + P+ +T++T+ID + K G +  A ++F   +  G       Y+ +I++
Sbjct:  415 LLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINS 523

HSP 8 Score: 51.6026 bits (122), Expect = 4.531e-7
Identity = 32/115 (27.83%), Postives = 53/115 (46.09%), Query Frame = -1

Query:    7 YAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 351
            +AK G   +AL +    + +G+     T  +++      G+  E  ALF+E++   + P    Y+ ++  Y K G   +A  +  E +  G+  D   YS LIDA    G  ESA
Sbjct:  279 FAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESA 393

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy Swiss-Prot
Match: PPR39_ARATH (Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.509e-20
Identity = 40/115 (34.78%), Postives = 68/115 (59.13%), Query Frame = -1

Query:    4 AKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 348
             K G  + A ++  EME  G + D++TYN L+GG+   G++D+   L  +M  +K+SPN++T+S +ID + K G   EA  + +E    G+  + + Y++LID  CK   +E A+
Sbjct:  274 CKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAI 388

HSP 2 Score: 80.4925 bits (197), Expect = 6.700e-17
Identity = 35/119 (29.41%), Postives = 70/119 (58.82%), Query Frame = -1

Query:    7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363
            L+  + K G+  EA  + +EM   G+  + +TYN+L+ G+ K+ + +E   + D M ++   P+++T++ +I+ Y K    D+ +++FRE    G+ A+ V Y+ L+   C++G +E A
Sbjct:  339 LIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVA 457

HSP 3 Score: 76.2554 bits (186), Expect = 2.119e-15
Identity = 39/116 (33.62%), Postives = 64/116 (55.17%), Query Frame = -1

Query:    4 YAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 351
            + K  R EEA+ +   M   G   D++T+N L+ GY K  + D+   LF EM  + V  N +TY+T++  + + G  + A  +F+E     ++ D+V Y  L+D LC NG +E A+
Sbjct:  378 FCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKAL 493

HSP 4 Score: 74.3294 bits (181), Expect = 7.847e-15
Identity = 34/119 (28.57%), Postives = 71/119 (59.66%), Query Frame = -1

Query:    7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363
            L++ Y K  R ++ L++ REM   G+  + VTYN L+ G+ + GK +  + LF EM +++V P++++Y  ++D     G  ++A+++F + + + ++ D+ +Y  +I  +C    V+ A
Sbjct:  409 LINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDA 527

HSP 5 Score: 70.8626 bits (172), Expect = 1.473e-13
Identity = 37/110 (33.64%), Postives = 59/110 (53.64%), Query Frame = -1

Query:    7 RFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 336
            R  EAL++   M + G +  ++T N L+ G    GK  +   L D M      PN +TY  +++V  K G    AM++ R+ +   +K D V YS +ID LCK+G +++A
Sbjct:  173 RVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNA 282

HSP 6 Score: 68.5514 bits (166), Expect = 7.809e-13
Identity = 34/119 (28.57%), Postives = 66/119 (55.46%), Query Frame = -1

Query:    7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363
            +L++  K G+   A+++ R+ME+  ++ D V Y+ ++ G  K G  D    LF+EM+ +    +++TY+T+I  +   G +D+   + R+     +  +VV +S LID+  K G +  A
Sbjct:  234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREA 352

HSP 7 Score: 63.5438 bits (153), Expect = 3.809e-11
Identity = 30/108 (27.78%), Postives = 59/108 (54.63%), Query Frame = -1

Query:   28 YAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCK 351
            +   GR+++   + R+M    +  +VVT++ L+  + K+GK  E   L  EM  + ++PN +TY+++ID + K    +EA+ +       G   D++ ++ LI+  CK
Sbjct:  308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCK 415

HSP 8 Score: 50.447 bits (119), Expect = 9.059e-7
Identity = 28/108 (25.93%), Postives = 53/108 (49.07%), Query Frame = -1

Query:   28 YAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCK 351
            + + G+ E A  + +EM    +R D+V+Y  LL G    G+ ++   +F +++  K+  ++  Y  +I         D+A D+F      G+K D   Y+ +I  LC+
Sbjct:  448 FCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCR 555

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy Swiss-Prot
Match: PP318_ARATH (Putative pentatricopeptide repeat-containing protein At4g17915 OS=Arabidopsis thaliana GN=At4g17915 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.026e-19
Identity = 47/121 (38.84%), Postives = 74/121 (61.16%), Query Frame = -1

Query:    4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDV-FREFKWAGLKADVVLYSALIDALCKNGLVESAV 363
            L+S Y +    EEA  + R M D+G+R DV TYN+L+ G  ++   D V  LFDEM    + P+L +Y+T++  Y K G ++EA  V +++ + AGL      Y+ L+DALCK G +++A+
Sbjct:   54 LISGYCRFVGIEEAYAVTRRMRDAGIRPDVATYNSLIAGAARRLMLDHVLYLFDEMLEWGIYPDLWSYNTLMCCYFKLGKHEEAFRVLYKDLQLAGLNPGPDTYNVLLDALCKCGYIDNAL 174

HSP 2 Score: 60.4622 bits (145), Expect = 3.168e-10
Identity = 36/119 (30.25%), Postives = 61/119 (51.26%), Query Frame = -1

Query:    7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363
            LL    K G  + AL++ +EM+ S  + +++TYN L+ G  K  +    + +  E+K    +PN +TY+T++ +Y K       + +F E K  G   D   Y A++ AL K G  + A
Sbjct:  160 LLDALCKCGYIDNALELFKEMQ-SRFKPELMTYNILINGLCKSRRVGTAKWMLTELKKSGYTPNAVTYTTILKLYFKTRRIRRGLQLFLEMKREGYTYDGYAYFAVVSALIKTGRTKEA 277

HSP 3 Score: 59.3066 bits (142), Expect = 7.598e-10
Identity = 36/120 (30.00%), Postives = 63/120 (52.50%), Query Frame = -1

Query:    4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363
            ++S   K GR +EA +  +E+   G R D+V+YN LL  Y K G  D V  L  E++ + +  +  T++ +++   + G    A + F      G+  ++V  + L+D LCK G V+ A+
Sbjct:  264 VVSALIKTGRTKEAYEYMQELVRKGRRHDIVSYNTLLNLYFKDGNLDAVDDLLGEIERRGMKADEYTHTIIVNGLLRTGQTRRAEEHFVSMGEMGIGLNLVTCNCLVDGLCKAGHVDRAM 383

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy Swiss-Prot
Match: PP247_ARATH (Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.529e-19
Identity = 42/114 (36.84%), Postives = 69/114 (60.53%), Query Frame = -1

Query:    7 AKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 348
             K G F++AL +  EME  G++ DVVTY++L+GG    GK+D+   +  EM  + + P+++T+S +IDV+ K G   EA +++ E    G+  D + Y++LID  CK   +  A
Sbjct:  256 CKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEA 369

HSP 2 Score: 82.4185 bits (202), Expect = 1.170e-17
Identity = 38/119 (31.93%), Postives = 68/119 (57.14%), Query Frame = -1

Query:    7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363
            L+ ++ K G+  EA ++  EM   G+  D +TYN+L+ G+ K+    E   +FD M ++   P+++TYS +I+ Y K    D+ M +FRE    GL  + + Y+ L+   C++G + +A
Sbjct:  321 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAA 439

HSP 3 Score: 74.7146 bits (182), Expect = 7.121e-15
Identity = 40/106 (37.74%), Postives = 60/106 (56.60%), Query Frame = -1

Query:   22 GRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 339
            GR  EAL +   M + G + D VTY  +L    K G       LF +M+ + +  +++ YS +ID   K G +D+A+ +F E +  G+KADVV YS+LI  LC +G
Sbjct:  189 GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDG 294

HSP 4 Score: 71.2478 bits (173), Expect = 1.100e-13
Identity = 35/104 (33.65%), Postives = 63/104 (60.58%), Query Frame = -1

Query:   28 GRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCK 339
            G++++   + REM    +  DVVT++AL+  + K+GK  E + L++EM  + ++P+ +TY+++ID + K     EA  +F      G + D+V YS LI++ CK
Sbjct:  294 GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCK 397

HSP 5 Score: 70.8626 bits (172), Expect = 1.245e-13
Identity = 32/121 (26.45%), Postives = 69/121 (57.02%), Query Frame = -1

Query:    1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363
            L++ Y K  R ++ + + RE+   G+  + +TYN L+ G+ + GK +  + LF EM ++ V P+++TY  ++D     G  ++A+++F + + + +   + +Y+ +I  +C    V+ A S
Sbjct:  391 LINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWS 511

HSP 6 Score: 70.4774 bits (171), Expect = 2.021e-13
Identity = 39/113 (34.51%), Postives = 62/113 (54.87%), Query Frame = -1

Query:    1 GRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 339
            GR  EA+ +   M +   R D+VT + L+ G   +G+  E   L D M      P+ +TY  +++   K G    A+D+FR+ +   +KA VV YS +ID+LCK+G  + A+S
Sbjct:  154 GRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALS 266

HSP 7 Score: 69.707 bits (169), Expect = 3.573e-13
Identity = 37/114 (32.46%), Postives = 64/114 (56.14%), Query Frame = -1

Query:   22 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 363
            +L+   K G    ALD+ R+ME+  ++  VV Y+ ++    K G +D+  +LF+EM+ + +  +++TYS++I      G +D+   + RE     +  DVV +SALID   K G
Sbjct:  216 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEG 329

HSP 8 Score: 59.3066 bits (142), Expect = 1.004e-9
Identity = 31/101 (30.69%), Postives = 52/101 (51.49%), Query Frame = -1

Query:   34 RFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDAL 336
            + ++A  +   + D G++ DVVTYN ++GG  K+G   E   LF +MK    +P+  TY+ +I  +  G     ++++  E K  G  AD      +ID L
Sbjct:  505 KVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 605

HSP 9 Score: 59.3066 bits (142), Expect = 1.082e-9
Identity = 32/115 (27.83%), Postives = 58/115 (50.43%), Query Frame = -1

Query:    7 YAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 351
            + + G+   A ++ +EM   G+   VVTY  LL G    G+ ++   +F++M+  +++  +  Y+ +I         D+A  +F      G+K DVV Y+ +I  LCK G +  A
Sbjct:  430 FCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEA 544

HSP 10 Score: 56.6102 bits (135), Expect = 8.787e-9
Identity = 37/112 (33.04%), Postives = 57/112 (50.89%), Query Frame = -1

Query:    7 GRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDA-LCKNGLVESA 339
            G   +AL+I  +M+ S M   +  YN ++ G     K D+  +LF  +  + V P+++TY+ MI    K G   EA  +FR+ K  G   D   Y+ LI A L  +GL+ S 
Sbjct:  469 GELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSV 580

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy Swiss-Prot
Match: PP124_ARATH (Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidopsis thaliana GN=PTAC2 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.558e-19
Identity = 41/120 (34.17%), Postives = 75/120 (62.50%), Query Frame = -1

Query:    7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGL-YDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363
            ++S+  + G  ++ L++  EM   G+ R V +Y AL+  YG+ G+Y+    L D MK +K+SP++LTY+T+I+  ++GGL ++  + +F E +  G++ D+V Y+ L+ A    GL + A
Sbjct:  147 MISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEA 266

HSP 2 Score: 86.6557 bits (213), Expect = 5.739e-19
Identity = 43/119 (36.13%), Postives = 70/119 (58.82%), Query Frame = -1

Query:    7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363
            LL  YAK G  +EA+ +  +M+ +G   +  TY+ LL  +G+ G+YD+VR LF EMK+    P+  TY+ +I+V+ +GG + E + +F +     ++ D+  Y  +I A  K GL E A
Sbjct:  323 LLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDA 441

HSP 3 Score: 78.5666 bits (192), Expect = 4.215e-16
Identity = 38/121 (31.40%), Postives = 62/121 (51.24%), Query Frame = -1

Query:    1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363
            L+  + KL R E+  D+  EM   G   D+ +YN LL  Y K G   E   +F +M+A   +PN  TYS +++++ + G YD+   +F E K +    D   Y+ LI+   + G  +  V+
Sbjct:  288 LVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVT 408

HSP 4 Score: 65.0846 bits (157), Expect = 1.710e-11
Identity = 37/114 (32.46%), Postives = 63/114 (55.26%), Query Frame = -1

Query:   22 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 363
            LLS  A  G  +EA  + R M D G+  D+ TY+ L+  +GK  + ++V  L  EM +    P++ +Y+ +++ Y+K G   EAM VF + + AG   +   YS L++   ++G
Sbjct:  253 LLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSG 366

HSP 5 Score: 60.8474 bits (146), Expect = 4.524e-10
Identity = 33/110 (30.00%), Postives = 57/110 (51.82%), Query Frame = -1

Query:    4 FEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 333
            +E  L +  EM   G++ D+VTYN LL     +G  DE   +F  M    + P+L TYS +++ + K    ++  D+  E    G   D+  Y+ L++A  K+G ++ A+
Sbjct:  228 WEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAM 337

HSP 6 Score: 58.9214 bits (141), Expect = 1.800e-9
Identity = 27/119 (22.69%), Postives = 61/119 (51.26%), Query Frame = -1

Query:    7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363
            L+ ++ + G F+E + +  +M +  +  D+ TY  ++   GK G +++ R +   M A  + P+   Y+ +I+ + +  LY+EA+  F      G    +  + +L+ +  + GLV+ +
Sbjct:  393 LIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKES 511

HSP 7 Score: 53.1434 bits (126), Expect = 1.382e-7
Identity = 30/107 (28.04%), Postives = 56/107 (52.34%), Query Frame = -1

Query:   43 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALI 363
            LL  +A+ G  +E+  I   + DSG+ R+  T+NA +  Y + GK++E    + +M+  +  P+  T   ++ VYS   L DE  + F E K + +   ++ Y  ++
Sbjct:  498 LLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMML 604

HSP 8 Score: 51.6026 bits (122), Expect = 3.714e-7
Identity = 30/86 (34.88%), Postives = 45/86 (52.33%), Query Frame = -1

Query:   94 YAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFRE 351
            Y + G+FEEA+    +ME S    D  T  A+L  Y      DE R  F+EMKA  + P+++ Y  M+ VY K   +D+  ++  E
Sbjct:  537 YKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEE 622

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy Swiss-Prot
Match: PP362_ARATH (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 4.087e-19
Identity = 40/121 (33.06%), Postives = 74/121 (61.16%), Query Frame = -1

Query:    1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363
            LLS + + G+ E A+ I  EM ++G + ++ T+NA +  YG +GK+ E+  +FDE+    +SP+++T++T++ V+ + G+  E   VF+E K AG   +   ++ LI A  + G  E A++
Sbjct:  390 LLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMT 510

HSP 2 Score: 86.6557 bits (213), Expect = 6.355e-19
Identity = 41/121 (33.88%), Postives = 70/121 (57.85%), Query Frame = -1

Query:    1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363
            L+S YA+ G  +EA+++  +M + G + DV TY  LL G+ + GK +   ++F+EM+     PN+ T++  I +Y   G + E M +F E    GL  D+V ++ L+    +NG+ +S VS
Sbjct:  355 LISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGM-DSEVS 474

HSP 3 Score: 82.4185 bits (202), Expect = 1.543e-17
Identity = 40/119 (33.61%), Postives = 67/119 (56.30%), Query Frame = -1

Query:    7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363
             + +Y   G+F E + I  E+   G+  D+VT+N LL  +G+ G   EV  +F EMK     P   T++T+I  YS+ G +++AM V+R    AG+  D+  Y+ ++ AL + G+ E +
Sbjct:  425 FIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQS 543

HSP 4 Score: 82.4185 bits (202), Expect = 1.886e-17
Identity = 42/110 (38.18%), Postives = 65/110 (59.09%), Query Frame = -1

Query:    1 EEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 330
            +EA  +  EM+ +G   D VTYNALL  YGK  +  E   + +EM     SP+++TY+++I  Y++ G+ DEAM++  +    G K DV  Y+ L+    + G VESA+S
Sbjct:  296 QEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMS 405

HSP 5 Score: 78.5666 bits (192), Expect = 4.232e-16
Identity = 35/107 (32.71%), Postives = 61/107 (57.01%), Query Frame = -1

Query:   43 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALI 363
            LL +Y K  R +EA+ +  EM  +G    +VTYN+L+  Y + G  DE   L ++M  +   P++ TY+T++  + + G  + AM +F E + AG K ++  ++A I
Sbjct:  320 LLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFI 426

HSP 6 Score: 75.0998 bits (183), Expect = 6.062e-15
Identity = 42/156 (26.92%), Postives = 78/156 (50.00%), Query Frame = -1

Query:    4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQG-KYDEVRALFDEMKAQKVSPNLLTYSTMI-----------------------------------DVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363
            L+S +A  GR+ EA+++ ++ME+ G +  ++TYN +L  +GK G  ++++ +L ++MK+  ++P+  TY+T+I                                   DVY K     EAM V  E    G    +V Y++LI A  ++G+++ A+
Sbjct:  214 LISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAM 369

HSP 7 Score: 67.3958 bits (163), Expect = 2.090e-12
Identity = 28/112 (25.00%), Postives = 65/112 (58.04%), Query Frame = -1

Query:   28 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCK 363
            L+ ++++   F ++ +I RE+   G++ D+++YN ++  Y +  +  +   +F EM+   + P+++TY+T I  Y+   +++EA+ V R     G + +   Y++++D  CK
Sbjct:  670 LMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCK 781

HSP 8 Score: 62.003 bits (149), Expect = 1.473e-10
Identity = 39/156 (25.00%), Postives = 67/156 (42.95%), Query Frame = -1

Query:    4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSK------------------------------------GGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363
            ++S+  K GR   A ++   +++ G   DV +Y +L+  +   G+Y E   +F +M+     P L+TY+ +++V+ K                                    G L+ EA  VF E K AG   D V Y+AL+D   K+   + A+
Sbjct:  179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAM 334

HSP 9 Score: 62.003 bits (149), Expect = 1.756e-10
Identity = 29/119 (24.37%), Postives = 66/119 (55.46%), Query Frame = -1

Query:    7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363
            L+ + +K     EA     E+++ G   D+ T N+++  YG++    +   + D MK +  +P++ TY++++ ++S+   + ++ ++ RE    G+K D++ Y+ +I A C+N  +  A
Sbjct:  600 LVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDA 718

HSP 10 Score: 61.2326 bits (147), Expect = 2.950e-10
Identity = 26/78 (33.33%), Postives = 47/78 (60.26%), Query Frame = -1

Query:  130 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKG 363
            L+S Y++ G FE+A+ + R M D+G+  D+ TYN +L    + G +++   +  EM+  +  PN LTY +++  Y+ G
Sbjct:  495 LISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANG 572

HSP 11 Score: 57.3806 bits (137), Expect = 4.797e-9
Identity = 27/120 (22.50%), Postives = 63/120 (52.50%), Query Frame = -1

Query:    4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363
            ++SIY +     +A  +   M++ G    + TYN+L+  + +   + +   +  E+ A+ + P++++Y+T+I  Y +     +A  +F E + +G+  DV+ Y+  I +   + + E A+
Sbjct:  635 MVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAI 754

HSP 12 Score: 56.9954 bits (136), Expect = 6.371e-9
Identity = 27/109 (24.77%), Postives = 61/109 (55.96%), Query Frame = -1

Query:   37 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDA 363
            LL+++ + G   E   + +EM+ +G   +  T+N L+  Y + G +++   ++  M    V+P+L TY+T++   ++GG+++++  V  E +    K + + Y +L+ A
Sbjct:  460 LLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568

HSP 13 Score: 51.9878 bits (123), Expect = 3.113e-7
Identity = 27/80 (33.75%), Postives = 40/80 (50.00%), Query Frame = -1

Query:  112 YAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEA 351
            Y +  R  +A  I  EM +SG+  DV+TYN  +G Y     ++E   +   M      PN  TY++++D Y K    DEA
Sbjct:  709 YCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEA 788

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy Swiss-Prot
Match: PPR76_ARATH (Pentatricopeptide repeat-containing protein At1g51965, mitochondrial OS=Arabidopsis thaliana GN=At1g51965 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 6.124e-19
Identity = 40/120 (33.33%), Postives = 73/120 (60.83%), Query Frame = -1

Query:    4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363
            L++ + ++G  +EA++I  E+E S  + D+++YN+L+   GK G  DE    F EM+ + ++P+++TYST+++ + K    + A  +F E    G + ++V Y+ L+D L KNG    AV
Sbjct:  483 LIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAV 602

HSP 2 Score: 78.5666 bits (192), Expect = 2.888e-16
Identity = 40/121 (33.06%), Postives = 66/121 (54.55%), Query Frame = -1

Query:    1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363
            + S   KL +     D+  +M+  G   D+ TYN L+  +G+ G+ DE   +F+E++     P++++Y+++I+   K G  DEA   F+E +  GL  DVV YS L++   K   VE A S
Sbjct:  448 VFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYS 568

HSP 3 Score: 76.2554 bits (186), Expect = 1.962e-15
Identity = 35/111 (31.53%), Postives = 66/111 (59.46%), Query Frame = -1

Query:    7 GRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 339
            G+  EA+++  ++ + G+  D + YN +    GK  +   +  LF++MK    SP++ TY+ +I  + + G  DEA+++F E + +  K D++ Y++LI+ L KNG V+ A
Sbjct:  421 GKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEA 531

HSP 4 Score: 73.559 bits (179), Expect = 1.619e-14
Identity = 36/106 (33.96%), Postives = 62/106 (58.49%), Query Frame = -1

Query:   46 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSAL 363
            L++   K G  +EA    +EM++ G+  DVVTY+ L+  +GK  + +   +LF+EM  +   PN++TY+ ++D   K G   EA+D++ + K  GL  D + Y+ L
Sbjct:  518 LINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623

HSP 5 Score: 64.6994 bits (156), Expect = 1.778e-11
Identity = 34/107 (31.78%), Postives = 59/107 (55.14%), Query Frame = -1

Query:   22 LGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 342
            L + E+A  +  +M+    RRD  TY  ++   G+ GK DE   LF+EM  + ++ N++ Y+T++ V +KG + D+A+ VF      G + +   YS L++ L   G
Sbjct:  248 LAKDEKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEG 354

HSP 6 Score: 58.5362 bits (140), Expect = 1.752e-9
Identity = 38/120 (31.67%), Postives = 60/120 (50.00%), Query Frame = -1

Query:    4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363
            LL  Y +   + +A D+  E+   G + D+  YN LL    K  K  +V   F++MK +    +  TY+ MI    + G  DEA+ +F E    GL  +VV Y+ L+  L K  +V+ A+
Sbjct:  209 LLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEKACQV---FEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAI 325

The following BLAST results are available for this feature:

BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy TrEMBL
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy Swiss-Prot

BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
A0A067H4L1_CITSI	1.144e-61	84.30	Uncharacterized protein OS=Citrus sinensis GN=CISI...	[more]
V4TW73_9ROSI	1.167e-61	84.30	Uncharacterized protein OS=Citrus clementina GN=CI...	[more]
F6HZA9_VITVI	1.256e-61	82.64	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A0A067HFZ0_CITSI	1.432e-61	84.30	Uncharacterized protein OS=Citrus sinensis GN=CISI...	[more]
V4TBU5_9ROSI	1.505e-61	84.30	Uncharacterized protein OS=Citrus clementina GN=CI...	[more]
A0A067JZS9_JATCU	5.406e-61	83.33	Uncharacterized protein OS=Jatropha curcas GN=JCGZ...	[more]
B9RNC1_RICCO	2.676e-60	80.99	Pentatricopeptide repeat-containing protein, putat...	[more]
W9QXX4_9ROSA	7.062e-60	81.82	Uncharacterized protein OS=Morus notabilis GN=L484...	[more]
A0A087HLC9_ARAAL	2.166e-57	78.51	Uncharacterized protein OS=Arabis alpina GN=AALP_A...	[more]
V4KY93_EUTSA	1.953e-56	78.51	Uncharacterized protein OS=Eutrema salsugineum GN=...	[more]

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BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
PP178_ARATH	1.203e-57	78.51	Pentatricopeptide repeat-containing protein At2g31...	[more]
PP143_ARATH	1.743e-21	36.67	Putative pentatricopeptide repeat-containing prote...	[more]
PP442_ARATH	2.015e-21	38.02	Pentatricopeptide repeat-containing protein At5g61...	[more]
PP413_ARATH	2.904e-21	36.36	Pentatricopeptide repeat-containing protein At5g42...	[more]
PPR39_ARATH	4.509e-20	34.78	Pentatricopeptide repeat-containing protein At1g12...	[more]
PP318_ARATH	1.026e-19	38.84	Putative pentatricopeptide repeat-containing prote...	[more]
PP247_ARATH	1.529e-19	36.84	Pentatricopeptide repeat-containing protein At3g22...	[more]
PP124_ARATH	1.558e-19	34.17	Pentatricopeptide repeat-containing protein At1g74...	[more]
PP362_ARATH	4.087e-19	33.06	Pentatricopeptide repeat-containing protein At5g02...	[more]
PPR76_ARATH	6.124e-19	33.33	Pentatricopeptide repeat-containing protein At1g51...	[more]

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InterPro

Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 29..76 e-value: 1.3E-17 score: 63.6
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 95..120 e-value: 1.6E-8 score: 34.0
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 67..95 e-value: 4.1E-7 score: 27.8 coord: 1..29 e-value: 2.1E-6 score: 25.5 coord: 31..64 e-value: 9.6E-12 score: 42.3 coord: 101..120 e-value: 9.2E-4 score: 17.2
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 1..25 e-value: 2.1E-5 score: 24.3
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 99..121 score: 8.528
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 1..28 score: 9.591
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 29..63 score: 13.669
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 64..98 score: 11.29
IPR011990	Tetratricopeptide-like helical domain	GENE3D	1.25.40.10		coord: 3..90 e-value: 3.0E-7 score: 29.6
IPR011990	Tetratricopeptide-like helical domain	SUPERFAMILY	48452	TPR-like	coord: 4..90
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 1..119

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.arboreum_cottongen_reftransV1_0010846 ID=g.arboreum_cottongen_reftransV1_0010846; Name=g.arboreum_cottongen_reftransV1_0010846; organism=Gossypium arboreum; type=contig; length=363bp
GGATACAGCAGATTCCACCAACCCATTCTTGCATAAAGCATCAATTAATG
CACTGTATAGTACAACATCAGCCTTCAATCCTGCCCACTTAAACTCCCTA
AAAACATCCATAGCCTCGTCATACAAACCACCCTTCGAATACACATCAAT
CATTGTGGAGTAAGTTAATAAATTAGGTGACACCTTTTGAGCTTTCATTT
CATCAAACAGTGCTCTAACTTCATCATACTTTCCTTGTTTCCCGTATCCA
CCCAAAAGTGCATTGTAAGTAACAACATCCCTCCTCATCCCTGAATCCTC
CATCTCCCTGCAAATATCTAGAGCCTCCTCAAACCTACCAAGCTTTGCAT
AAATAGAAAGCAA

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR002885	Pentatricopeptide_rpt
IPR011990	TPR-like_helical_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Search form

g.arboreum_cottongen_reftransV1_0010846, g.arboreum_cottongen_reftransV1_0010846 (contig) Gossypium arboreum

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