g.arboreum_cottongen_reftransV1_0010846, g.arboreum_cottongen_reftransV1_0010846 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy TrEMBL
Match: A0A0B0NS02_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_16601 PE=4 SV=1) HSP 1 Score: 249.595 bits (636), Expect = 4.488e-75 Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS Sbjct: 398 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 518 HSP 2 Score: 90.8929 bits (224), Expect = 1.952e-18 Identity = 46/120 (38.33%), Postives = 73/120 (60.83%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 LL++ ++ G +E A ++ EM D G+ RD+ TYN L K G+ D + EM A+ + PN++TYSTM+D Y+K G +D+A+++F E K+ G+ D V Y+ L+ K G E A+ Sbjct: 293 LLAVCSRGGLWEAARNLFSEMVDRGIDRDIFTYNTFLDAVCKGGQMDLAFEIMAEMPAKNIFPNVITYSTMVDGYAKAGRFDDALNLFNEMKFLGIGLDRVSYNTLLSIYAKLGRFEEAL 412 HSP 3 Score: 80.8777 bits (198), Expect = 6.066e-15 Identity = 40/120 (33.33%), Postives = 75/120 (62.50%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQG-KYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L+S + + G +EAL + M++ G++ ++V YNA++ GK G ++ V +FDEM V P+ +T+++++ V S+GGL++ A ++F E G+ D+ Y+ +DA+CK G ++ A Sbjct: 222 LISAFGRSGYCDEALKVFDSMKNYGLKPNLVIYNAVIDACGKGGLEFKRVVEIFDEMLRSGVQPDRITFNSLLAVCSRGGLWEAARNLFSEMVDRGIDRDIFTYNTFLDAVCKGGQMDLA 341 HSP 4 Score: 80.4925 bits (197), Expect = 6.610e-15 Identity = 39/114 (34.21%), Postives = 71/114 (62.28%), Query Frame = -1 Query: 22 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 363 L K G+ + A +I EM + +V+TY+ ++ GY K G++D+ LF+EMK + + ++Y+T++ +Y+K G ++EA+D+ RE + +G++ DVV Y+AL+ K G Sbjct: 328 FLDAVCKGGQMDLAFEIMAEMPAKNIFPNVITYSTMVDGYAKAGRFDDALNLFNEMKFLGIGLDRVSYNTLLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQG 441 HSP 5 Score: 72.7886 bits (177), Expect = 2.802e-12 Identity = 38/120 (31.67%), Postives = 68/120 (56.67%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGL-YDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 ++SI +LG+ E A I + G + V ++AL+ +G+ G DE +FD MK + PNL+ Y+ +ID KGGL + +++F E +G++ D + +++L+ + GL E+A Sbjct: 187 MISILGRLGKVELARGIFHTALNEGYGKTVYAFSALISAFGRSGYCDEALKVFDSMKNYGLKPNLVIYNAVIDACGKGGLEFKRVVEIFDEMLRSGVQPDRITFNSLLAVCSRGGLWEAA 306 HSP 6 Score: 67.781 bits (164), Expect = 1.477e-10 Identity = 29/86 (33.72%), Postives = 55/86 (63.95%), Query Frame = -1 Query: 106 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMD 363 ++ +Y+K G ++EA+D+ RE + +G++ DVV Y+AL+ K G + +L DEM + + PN++TY+++ID + + + A D Sbjct: 468 MIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATSEHAFD 553
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy TrEMBL
Match: A0A0D2SBY3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G121300 PE=4 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 1.034e-71 Identity = 118/121 (97.52%), Postives = 119/121 (98.35%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYST+IDVYSKGGLYDEAMDVFREFK AGLKADVVLYSALIDALCKNGLVE AVS Sbjct: 398 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTVIDVYSKGGLYDEAMDVFREFKRAGLKADVVLYSALIDALCKNGLVEYAVS 518 HSP 2 Score: 90.5077 bits (223), Expect = 2.159e-18 Identity = 46/120 (38.33%), Postives = 73/120 (60.83%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 LL++ ++ G +E A ++ EM D G+ RD+ TYN L K G+ D + EM A+ + PN++TYSTM+D Y+K G +D+A+++F E K+ G+ D V Y+ L+ K G E A+ Sbjct: 293 LLAVCSRGGLWEAASNLFSEMVDRGIDRDIFTYNTFLDAVCKGGQMDLAFEIMAEMPAKNIFPNVITYSTMVDGYAKAGRFDDALNLFNEMKFLGIGLDRVSYNTLLSIYAKLGRFEEAL 412 HSP 3 Score: 80.4925 bits (197), Expect = 6.347e-15 Identity = 40/120 (33.33%), Postives = 75/120 (62.50%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQG-KYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L+S + + G +EAL + M++ G++ ++V YNA++ GK G ++ V +FDEM V P+ +T+++++ V S+GGL++ A ++F E G+ D+ Y+ +DA+CK G ++ A Sbjct: 222 LISAFGRSGYCDEALKVFDSMKNYGLKPNLVIYNAVIDACGKGGLEFKRVVEIFDEMLRSGVQPDRITFNSLLAVCSRGGLWEAASNLFSEMVDRGIDRDIFTYNTFLDAVCKGGQMDLA 341 HSP 4 Score: 80.4925 bits (197), Expect = 6.347e-15 Identity = 39/114 (34.21%), Postives = 71/114 (62.28%), Query Frame = -1 Query: 22 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 363 L K G+ + A +I EM + +V+TY+ ++ GY K G++D+ LF+EMK + + ++Y+T++ +Y+K G ++EA+D+ RE + +G++ DVV Y+AL+ K G Sbjct: 328 FLDAVCKGGQMDLAFEIMAEMPAKNIFPNVITYSTMVDGYAKAGRFDDALNLFNEMKFLGIGLDRVSYNTLLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQG 441 HSP 5 Score: 72.0182 bits (175), Expect = 5.144e-12 Identity = 37/120 (30.83%), Postives = 68/120 (56.67%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGL-YDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 ++SI +LG+ E A + + G + V ++AL+ +G+ G DE +FD MK + PNL+ Y+ +ID KGGL + +++F E +G++ D + +++L+ + GL E+A Sbjct: 187 MISILGRLGKVELARGVFHTALNEGYGKTVYAFSALISAFGRSGYCDEALKVFDSMKNYGLKPNLVIYNAVIDACGKGGLEFKRVVEIFDEMLRSGVQPDRITFNSLLAVCSRGGLWEAA 306 HSP 6 Score: 65.4698 bits (158), Expect = 8.374e-10 Identity = 28/86 (32.56%), Postives = 54/86 (62.79%), Query Frame = -1 Query: 106 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMD 363 ++ +Y+K G ++EA+D+ RE + +G++ DVV Y+AL+ K G + +L DEM + + PN++TY+++ID + + + D Sbjct: 468 VIDVYSKGGLYDEAMDVFREFKRAGLKADVVLYSALIDALCKNGLVEYAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATSEHVFD 553
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy TrEMBL
Match: A0A0D2QR84_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G121300 PE=4 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 2.192e-71 Identity = 118/121 (97.52%), Postives = 119/121 (98.35%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYST+IDVYSKGGLYDEAMDVFREFK AGLKADVVLYSALIDALCKNGLVE AVS Sbjct: 398 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTVIDVYSKGGLYDEAMDVFREFKRAGLKADVVLYSALIDALCKNGLVEYAVS 518 HSP 2 Score: 90.5077 bits (223), Expect = 2.211e-18 Identity = 46/120 (38.33%), Postives = 73/120 (60.83%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 LL++ ++ G +E A ++ EM D G+ RD+ TYN L K G+ D + EM A+ + PN++TYSTM+D Y+K G +D+A+++F E K+ G+ D V Y+ L+ K G E A+ Sbjct: 293 LLAVCSRGGLWEAASNLFSEMVDRGIDRDIFTYNTFLDAVCKGGQMDLAFEIMAEMPAKNIFPNVITYSTMVDGYAKAGRFDDALNLFNEMKFLGIGLDRVSYNTLLSIYAKLGRFEEAL 412 HSP 3 Score: 80.4925 bits (197), Expect = 6.423e-15 Identity = 40/120 (33.33%), Postives = 75/120 (62.50%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQG-KYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L+S + + G +EAL + M++ G++ ++V YNA++ GK G ++ V +FDEM V P+ +T+++++ V S+GGL++ A ++F E G+ D+ Y+ +DA+CK G ++ A Sbjct: 222 LISAFGRSGYCDEALKVFDSMKNYGLKPNLVIYNAVIDACGKGGLEFKRVVEIFDEMLRSGVQPDRITFNSLLAVCSRGGLWEAASNLFSEMVDRGIDRDIFTYNTFLDAVCKGGQMDLA 341 HSP 4 Score: 80.4925 bits (197), Expect = 6.547e-15 Identity = 39/114 (34.21%), Postives = 71/114 (62.28%), Query Frame = -1 Query: 22 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 363 L K G+ + A +I EM + +V+TY+ ++ GY K G++D+ LF+EMK + + ++Y+T++ +Y+K G ++EA+D+ RE + +G++ DVV Y+AL+ K G Sbjct: 328 FLDAVCKGGQMDLAFEIMAEMPAKNIFPNVITYSTMVDGYAKAGRFDDALNLFNEMKFLGIGLDRVSYNTLLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQG 441 HSP 5 Score: 72.4034 bits (176), Expect = 4.712e-12 Identity = 37/120 (30.83%), Postives = 68/120 (56.67%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGL-YDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 ++SI +LG+ E A + + G + V ++AL+ +G+ G DE +FD MK + PNL+ Y+ +ID KGGL + +++F E +G++ D + +++L+ + GL E+A Sbjct: 187 MISILGRLGKVELARGVFHTALNEGYGKTVYAFSALISAFGRSGYCDEALKVFDSMKNYGLKPNLVIYNAVIDACGKGGLEFKRVVEIFDEMLRSGVQPDRITFNSLLAVCSRGGLWEAA 306 HSP 6 Score: 65.4698 bits (158), Expect = 8.504e-10 Identity = 28/86 (32.56%), Postives = 54/86 (62.79%), Query Frame = -1 Query: 106 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMD 363 ++ +Y+K G ++EA+D+ RE + +G++ DVV Y+AL+ K G + +L DEM + + PN++TY+++ID + + + D Sbjct: 468 VIDVYSKGGLYDEAMDVFREFKRAGLKADVVLYSALIDALCKNGLVEYAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATSEHVFD 553
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy TrEMBL
Match: A0A0D2REW6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G138300 PE=4 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 1.629e-68 Identity = 113/121 (93.39%), Postives = 118/121 (97.52%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 LLSIYAKLGRFEEALDICREME SG+R+DVVTYNALLGGYGKQGKYDEVR LFDEMKAQ+VSPNLLTYST+IDVYSKGGLY+EAMDVFREFK AGLKADVVLYSALIDALCKNGLVESAVS Sbjct: 404 LLSIYAKLGRFEEALDICREMEGSGIRKDVVTYNALLGGYGKQGKYDEVRRLFDEMKAQRVSPNLLTYSTVIDVYSKGGLYEEAMDVFREFKRAGLKADVVLYSALIDALCKNGLVESAVS 524 HSP 2 Score: 88.9669 bits (219), Expect = 7.311e-18 Identity = 43/120 (35.83%), Postives = 79/120 (65.83%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQG-KYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L+S Y + G ++EA+ + M++ G++ + VTYNA++ GK G ++ V +FDEM + V P+ +T+++++ V S+GGL++ AM++F E G+ D+ Y+ L+DA+CK G ++ A Sbjct: 229 LISAYGRSGYYDEAIKVFDSMKNYGLKPNSVTYNAVIDACGKGGVEFKRVVEIFDEMLSGGVQPDRITFNSLLAVCSRGGLWEAAMNLFSEMVNRGIDRDIFTYNTLLDAVCKGGQMDLA 348 HSP 3 Score: 85.1149 bits (209), Expect = 1.494e-16 Identity = 46/120 (38.33%), Postives = 75/120 (62.50%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 LL++ ++ G +E A+++ EM + G+ RD+ TYN LL K G+ D + +EM A V PN++TYST+ID Y+K G +++A+++F E K+ G+ D V Y+ L+ K G E A+ Sbjct: 300 LLAVCSRGGLWEAAMNLFSEMVNRGIDRDIFTYNTLLDAVCKGGQMDLAFDIMEEMPAN-VLPNVVTYSTIIDGYAKAGRFNDALNLFNEMKFLGIGLDRVSYNTLLSIYAKLGRFEEAL 418 HSP 4 Score: 80.8777 bits (198), Expect = 4.744e-15 Identity = 41/114 (35.96%), Postives = 73/114 (64.04%), Query Frame = -1 Query: 22 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 363 LL K G+ + A DI EM + + +VVTY+ ++ GY K G++++ LF+EMK + + ++Y+T++ +Y+K G ++EA+D+ RE + +G++ DVV Y+AL+ K G Sbjct: 335 LLDAVCKGGQMDLAFDIMEEMP-ANVLPNVVTYSTIIDGYAKAGRFNDALNLFNEMKFLGIGLDRVSYNTLLSIYAKLGRFEEALDICREMEGSGIRKDVVTYNALLGGYGKQG 447 HSP 5 Score: 74.7146 bits (182), Expect = 5.673e-13 Identity = 39/122 (31.97%), Postives = 69/122 (56.56%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGL-YDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 ++SI +LG+ E A+ I G V ++AL+ YG+ G YDE +FD MK + PN +TY+ +ID KGG+ + +++F E G++ D + +++L+ + GL E+A++ Sbjct: 194 MISILGRLGKVELAMGIFETALREGYGNTVYAFSALISAYGRSGYYDEAIKVFDSMKNYGLKPNSVTYNAVIDACGKGGVEFKRVVEIFDEMLSGGVQPDRITFNSLLAVCSRGGLWEAAMN 315 HSP 6 Score: 66.2402 bits (160), Expect = 5.262e-10 Identity = 28/77 (36.36%), Postives = 52/77 (67.53%), Query Frame = -1 Query: 133 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSK 363 ++ +Y+K G +EEA+D+ RE + +G++ DVV Y+AL+ K G + +L DEM + + PN++TY+++ID + + Sbjct: 474 VIDVYSKGGLYEEAMDVFREFKRAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 550 HSP 7 Score: 65.0846 bits (157), Expect = 1.245e-9 Identity = 36/111 (32.43%), Postives = 60/111 (54.05%), Query Frame = -1 Query: 1 FEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 333 F+ ++I EM G++ D +T+N+LL + G ++ LF EM + + ++ TY+T++D KGG D A D+ E A + +VV YS +ID K G A++ Sbjct: 275 FKRVVEIFDEMLSGGVQPDRITFNSLLAVCSRGGLWEAAMNLFSEMVNRGIDRDIFTYNTLLDAVCKGGQMDLAFDIMEEMP-ANVLPNVVTYSTIIDGYAKAGRFNDALN 384
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy TrEMBL
Match: A0A0B0PW05_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_05807 PE=4 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 1.820e-68 Identity = 113/121 (93.39%), Postives = 118/121 (97.52%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 LLSIYAKLGRFEEALDICREME SG+R+DVVTYNALLGGYGKQGKYDEVR LFDEMKAQ+VSPNLLTYST+IDVYSKGGLY+EAMDVFREFK AGLKADVVLYSALIDALCKNGLVESAVS Sbjct: 404 LLSIYAKLGRFEEALDICREMEGSGIRKDVVTYNALLGGYGKQGKYDEVRRLFDEMKAQRVSPNLLTYSTVIDVYSKGGLYEEAMDVFREFKRAGLKADVVLYSALIDALCKNGLVESAVS 524 HSP 2 Score: 89.3521 bits (220), Expect = 6.238e-18 Identity = 43/120 (35.83%), Postives = 79/120 (65.83%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQG-KYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L+S Y + G ++EA+ + M++ G++ + VTYNA++ GK G ++ V +FDEM + V P+ +T+++++ V S+GGL++ AM++F E G+ D+ Y+ L+DA+CK G ++ A Sbjct: 229 LISAYGRSGYYDEAIKVFDSMKNYGLKPNSVTYNAVIDACGKGGVEFKRVVEIFDEMLSGGVQPDRITFNSLLAVCSRGGLWEAAMNLFSEMVNRGIDRDIFTYNTLLDAVCKGGQMDLA 348 HSP 3 Score: 83.5741 bits (205), Expect = 7.080e-16 Identity = 46/120 (38.33%), Postives = 73/120 (60.83%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 LL++ ++ G +E A+++ EM + G+ RD+ TYN LL K G+ D + EM A V PN++TYSTMID Y+K +++A+++F E K+ G+ D V Y+ L+ K G E A+ Sbjct: 300 LLAVCSRGGLWEAAMNLFSEMVNRGIDRDIFTYNTLLDAVCKGGQMDLAFDIMAEMPAN-VLPNVVTYSTMIDGYAKASRFNDALNLFNEMKFLGIGLDRVSYNTLLSIYAKLGRFEEAL 418 HSP 4 Score: 78.1814 bits (191), Expect = 4.154e-14 Identity = 40/114 (35.09%), Postives = 72/114 (63.16%), Query Frame = -1 Query: 22 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 363 LL K G+ + A DI EM + + +VVTY+ ++ GY K ++++ LF+EMK + + ++Y+T++ +Y+K G ++EA+D+ RE + +G++ DVV Y+AL+ K G Sbjct: 335 LLDAVCKGGQMDLAFDIMAEMP-ANVLPNVVTYSTMIDGYAKASRFNDALNLFNEMKFLGIGLDRVSYNTLLSIYAKLGRFEEALDICREMEGSGIRKDVVTYNALLGGYGKQG 447 HSP 5 Score: 75.0998 bits (183), Expect = 5.098e-13 Identity = 39/122 (31.97%), Postives = 69/122 (56.56%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGL-YDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 ++SI +LG+ E A+ I G V ++AL+ YG+ G YDE +FD MK + PN +TY+ +ID KGG+ + +++F E G++ D + +++L+ + GL E+A++ Sbjct: 194 MISILGRLGKVELAMGIFETALREGYGNTVYAFSALISAYGRSGYYDEAIKVFDSMKNYGLKPNSVTYNAVIDACGKGGVEFKRVVEIFDEMLSGGVQPDRITFNSLLAVCSRGGLWEAAMN 315 HSP 6 Score: 66.2402 bits (160), Expect = 4.589e-10 Identity = 28/77 (36.36%), Postives = 52/77 (67.53%), Query Frame = -1 Query: 133 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSK 363 ++ +Y+K G +EEA+D+ RE + +G++ DVV Y+AL+ K G + +L DEM + + PN++TY+++ID + + Sbjct: 474 VIDVYSKGGLYEEAMDVFREFKRAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 550 HSP 7 Score: 62.7734 bits (151), Expect = 6.975e-9 Identity = 34/102 (33.33%), Postives = 56/102 (54.90%), Query Frame = -1 Query: 28 FEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCK 333 F+ ++I EM G++ D +T+N+LL + G ++ LF EM + + ++ TY+T++D KGG D A D+ E A + +VV YS +ID K Sbjct: 275 FKRVVEIFDEMLSGGVQPDRITFNSLLAVCSRGGLWEAAMNLFSEMVNRGIDRDIFTYNTLLDAVCKGGQMDLAFDIMAEMP-ANVLPNVVTYSTMIDGYAK 375
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy TrEMBL
Match: A0A0D2PUG7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G138300 PE=4 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 2.411e-68 Identity = 113/121 (93.39%), Postives = 118/121 (97.52%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 LLSIYAKLGRFEEALDICREME SG+R+DVVTYNALLGGYGKQGKYDEVR LFDEMKAQ+VSPNLLTYST+IDVYSKGGLY+EAMDVFREFK AGLKADVVLYSALIDALCKNGLVESAVS Sbjct: 491 LLSIYAKLGRFEEALDICREMEGSGIRKDVVTYNALLGGYGKQGKYDEVRRLFDEMKAQRVSPNLLTYSTVIDVYSKGGLYEEAMDVFREFKRAGLKADVVLYSALIDALCKNGLVESAVS 611 HSP 2 Score: 89.3521 bits (220), Expect = 7.631e-18 Identity = 43/120 (35.83%), Postives = 79/120 (65.83%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQG-KYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L+S Y + G ++EA+ + M++ G++ + VTYNA++ GK G ++ V +FDEM + V P+ +T+++++ V S+GGL++ AM++F E G+ D+ Y+ L+DA+CK G ++ A Sbjct: 316 LISAYGRSGYYDEAIKVFDSMKNYGLKPNSVTYNAVIDACGKGGVEFKRVVEIFDEMLSGGVQPDRITFNSLLAVCSRGGLWEAAMNLFSEMVNRGIDRDIFTYNTLLDAVCKGGQMDLA 435 HSP 3 Score: 85.5001 bits (210), Expect = 1.385e-16 Identity = 46/120 (38.33%), Postives = 75/120 (62.50%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 LL++ ++ G +E A+++ EM + G+ RD+ TYN LL K G+ D + +EM A V PN++TYST+ID Y+K G +++A+++F E K+ G+ D V Y+ L+ K G E A+ Sbjct: 387 LLAVCSRGGLWEAAMNLFSEMVNRGIDRDIFTYNTLLDAVCKGGQMDLAFDIMEEMPAN-VLPNVVTYSTIIDGYAKAGRFNDALNLFNEMKFLGIGLDRVSYNTLLSIYAKLGRFEEAL 505 HSP 4 Score: 80.8777 bits (198), Expect = 4.998e-15 Identity = 41/114 (35.96%), Postives = 73/114 (64.04%), Query Frame = -1 Query: 22 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 363 LL K G+ + A DI EM + + +VVTY+ ++ GY K G++++ LF+EMK + + ++Y+T++ +Y+K G ++EA+D+ RE + +G++ DVV Y+AL+ K G Sbjct: 422 LLDAVCKGGQMDLAFDIMEEMP-ANVLPNVVTYSTIIDGYAKAGRFNDALNLFNEMKFLGIGLDRVSYNTLLSIYAKLGRFEEALDICREMEGSGIRKDVVTYNALLGGYGKQG 534 HSP 5 Score: 75.0998 bits (183), Expect = 5.867e-13 Identity = 39/122 (31.97%), Postives = 69/122 (56.56%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGL-YDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 ++SI +LG+ E A+ I G V ++AL+ YG+ G YDE +FD MK + PN +TY+ +ID KGG+ + +++F E G++ D + +++L+ + GL E+A++ Sbjct: 281 MISILGRLGKVELAMGIFETALREGYGNTVYAFSALISAYGRSGYYDEAIKVFDSMKNYGLKPNSVTYNAVIDACGKGGVEFKRVVEIFDEMLSGGVQPDRITFNSLLAVCSRGGLWEAAMN 402 HSP 6 Score: 66.2402 bits (160), Expect = 4.979e-10 Identity = 28/77 (36.36%), Postives = 52/77 (67.53%), Query Frame = -1 Query: 133 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSK 363 ++ +Y+K G +EEA+D+ RE + +G++ DVV Y+AL+ K G + +L DEM + + PN++TY+++ID + + Sbjct: 561 VIDVYSKGGLYEEAMDVFREFKRAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 637 HSP 7 Score: 65.4698 bits (158), Expect = 1.031e-9 Identity = 36/111 (32.43%), Postives = 60/111 (54.05%), Query Frame = -1 Query: 1 FEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 333 F+ ++I EM G++ D +T+N+LL + G ++ LF EM + + ++ TY+T++D KGG D A D+ E A + +VV YS +ID K G A++ Sbjct: 362 FKRVVEIFDEMLSGGVQPDRITFNSLLAVCSRGGLWEAAMNLFSEMVNRGIDRDIFTYNTLLDAVCKGGQMDLAFDIMEEMP-ANVLPNVVTYSTIIDGYAKAGRFNDALN 471
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy TrEMBL
Match: A0A061DZ63_THECC (S uncoupled 1 OS=Theobroma cacao GN=TCM_004835 PE=4 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 2.207e-67 Identity = 110/121 (90.91%), Postives = 116/121 (95.87%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 +LSIYAKLGRFEEALDICREME SG+R+DVVTYNALLGGYGKQGKYDEVR LF+EMK QKVSPNLLTYST+IDVYSKGGLY+EAMDVFREFK GLKADVVLYSALIDALCKNGLVESAVS Sbjct: 402 VLSIYAKLGRFEEALDICREMEGSGIRKDVVTYNALLGGYGKQGKYDEVRRLFEEMKTQKVSPNLLTYSTVIDVYSKGGLYEEAMDVFREFKRVGLKADVVLYSALIDALCKNGLVESAVS 522 HSP 2 Score: 87.0409 bits (214), Expect = 4.558e-17 Identity = 41/120 (34.17%), Postives = 78/120 (65.00%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQG-KYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L+S + + G +EA+ + M+++G++ ++VTYNA++ GK G ++ V +FDEM V P+ +T+++++ V S+GGL++ A ++F E G+ D+ Y+ L+DA+CK G ++ A Sbjct: 226 LISAFGRSGYSDEAIKVFDSMKNNGLKPNLVTYNAVIDACGKGGVEFKRVVEIFDEMLRSGVQPDRITFNSLLAVCSRGGLWEAARNLFSEMVHRGIDQDIFTYNTLLDAVCKGGQMDLA 345 HSP 3 Score: 87.0409 bits (214), Expect = 4.646e-17 Identity = 44/120 (36.67%), Postives = 72/120 (60.00%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 LL++ ++ G +E A ++ EM G+ +D+ TYN LL K G+ D + EM + + PN++TYSTMID Y+K G +D+A+++F E K+ G+ D V Y+ ++ K G E A+ Sbjct: 297 LLAVCSRGGLWEAARNLFSEMVHRGIDQDIFTYNTLLDAVCKGGQMDLAFEIMAEMPTKNILPNVVTYSTMIDGYAKAGRFDDALNLFNEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 416 HSP 4 Score: 86.2705 bits (212), Expect = 6.750e-17 Identity = 41/114 (35.96%), Postives = 72/114 (63.16%), Query Frame = -1 Query: 22 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 363 LL K G+ + A +I EM + +VVTY+ ++ GY K G++D+ LF+EMK + + ++Y+T++ +Y+K G ++EA+D+ RE + +G++ DVV Y+AL+ K G Sbjct: 332 LLDAVCKGGQMDLAFEIMAEMPTKNILPNVVTYSTMIDGYAKAGRFDDALNLFNEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALDICREMEGSGIRKDVVTYNALLGGYGKQG 445 HSP 5 Score: 73.559 bits (179), Expect = 1.718e-12 Identity = 38/120 (31.67%), Postives = 67/120 (55.83%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGL-YDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 ++SI +LG+ E A I G V ++AL+ +G+ G DE +FD MK + PNL+TY+ +ID KGG+ + +++F E +G++ D + +++L+ + GL E+A Sbjct: 191 MISILGRLGKVELAKGIFETALTEGYGNTVYAFSALISAFGRSGYSDEAIKVFDSMKNNGLKPNLVTYNAVIDACGKGGVEFKRVVEIFDEMLRSGVQPDRITFNSLLAVCSRGGLWEAA 310 HSP 6 Score: 70.8626 bits (172), Expect = 1.321e-11 Identity = 36/111 (32.43%), Postives = 62/111 (55.86%), Query Frame = -1 Query: 1 FEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 333 F+ ++I EM SG++ D +T+N+LL + G ++ R LF EM + + ++ TY+T++D KGG D A ++ E + +VV YS +ID K G + A++ Sbjct: 272 FKRVVEIFDEMLRSGVQPDRITFNSLLAVCSRGGLWEAARNLFSEMVHRGIDQDIFTYNTLLDAVCKGGQMDLAFEIMAEMPTKNILPNVVTYSTMIDGYAKAGRFDDALN 382 HSP 7 Score: 69.3218 bits (168), Expect = 4.327e-11 Identity = 30/86 (34.88%), Postives = 54/86 (62.79%), Query Frame = -1 Query: 106 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMD 363 ++ +Y+K G +EEA+D+ RE + G++ DVV Y+AL+ K G + +L DEM + + PN++TY+++ID + + + A D Sbjct: 472 VIDVYSKGGLYEEAMDVFREFKRVGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATSECAFD 557
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy TrEMBL
Match: B9GSV1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s19470g PE=4 SV=2) HSP 1 Score: 218.779 bits (556), Expect = 5.864e-64 Identity = 106/121 (87.60%), Postives = 115/121 (95.04%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 LLSIYAKLGRFEEA+D+CREME+SG+R+DVVTYNALLGGYGKQ KYD VR +F+EMKA+ VSPNLLTYST+IDVYSKGGLY EAMDVFREFK AGLKADVVLYSALIDALCKNGLVESAVS Sbjct: 410 LLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALCKNGLVESAVS 530 HSP 2 Score: 88.1965 bits (217), Expect = 1.663e-17 Identity = 43/107 (40.19%), Postives = 71/107 (66.36%), Query Frame = -1 Query: 43 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALI 363 LL K G+ + A +I EM + +VVTY+ ++ GY K G+ D+ R LF+EMK +S + ++Y+T++ +Y+K G ++EAMDV RE + +G++ DVV Y+AL+ Sbjct: 340 LLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALL 446 HSP 3 Score: 87.0409 bits (214), Expect = 3.512e-17 Identity = 47/120 (39.17%), Postives = 71/120 (59.17%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 LL++ +K G +E A + EM + G+ +D+ TYN LL K G+ D + EM A+ + PN++TYSTMID Y+K G D+A ++F E K+ G+ D V Y+ L+ K G E A+ Sbjct: 305 LLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAM 424 HSP 4 Score: 81.2629 bits (199), Expect = 3.494e-15 Identity = 42/120 (35.00%), Postives = 74/120 (61.67%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQG-KYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 ++S Y + G EA+ I M+D G++ ++VTYNA++ GK G ++ V +FDEM + P+ +T+++++ V SKGGL++ A + E G+ D+ Y+ L+DA+CK G ++ A Sbjct: 234 IISAYGRSGYCNEAIKIFYSMKDYGLKPNLVTYNAVIDACGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMA 353 HSP 5 Score: 70.0922 bits (170), Expect = 2.803e-11 Identity = 37/109 (33.94%), Postives = 61/109 (55.96%), Query Frame = -1 Query: 7 FEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 333 F+ L+I EM +GM+ D +T+N+LL K G ++ R+L EM + + ++ TY+T++D KGG D A ++ E + +VV YS +ID K G ++ A Sbjct: 280 FKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDA 388 HSP 6 Score: 67.3958 bits (163), Expect = 2.015e-10 Identity = 29/86 (33.72%), Postives = 54/86 (62.79%), Query Frame = -1 Query: 106 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMD 363 L+ +Y+K G + EA+D+ RE + +G++ DVV Y+AL+ K G + +L DEM + + PN++TY+++ID + + + +D Sbjct: 480 LIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRPATTESVVD 565 HSP 7 Score: 66.6254 bits (161), Expect = 4.425e-10 Identity = 36/122 (29.51%), Postives = 66/122 (54.10%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGL-YDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 ++S +LG+ E A + + G V ++A++ YG+ G +E +F MK + PNL+TY+ +ID KGG+ + +++F E G++ D + +++L+ K GL E+A S Sbjct: 199 MISTLGRLGKVEMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMKDYGLKPNLVTYNAVIDACGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAARS 320
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy TrEMBL
Match: U5GLV2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s19470g PE=4 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 6.062e-64 Identity = 106/121 (87.60%), Postives = 115/121 (95.04%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 LLSIYAKLGRFEEA+D+CREME+SG+R+DVVTYNALLGGYGKQ KYD VR +F+EMKA+ VSPNLLTYST+IDVYSKGGLY EAMDVFREFK AGLKADVVLYSALIDALCKNGLVESAVS Sbjct: 410 LLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALCKNGLVESAVS 530 HSP 2 Score: 88.1965 bits (217), Expect = 1.661e-17 Identity = 43/107 (40.19%), Postives = 71/107 (66.36%), Query Frame = -1 Query: 43 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALI 363 LL K G+ + A +I EM + +VVTY+ ++ GY K G+ D+ R LF+EMK +S + ++Y+T++ +Y+K G ++EAMDV RE + +G++ DVV Y+AL+ Sbjct: 340 LLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALL 446 HSP 3 Score: 87.4261 bits (215), Expect = 3.217e-17 Identity = 47/120 (39.17%), Postives = 71/120 (59.17%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 LL++ +K G +E A + EM + G+ +D+ TYN LL K G+ D + EM A+ + PN++TYSTMID Y+K G D+A ++F E K+ G+ D V Y+ L+ K G E A+ Sbjct: 305 LLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAM 424 HSP 4 Score: 81.6481 bits (200), Expect = 3.199e-15 Identity = 42/120 (35.00%), Postives = 74/120 (61.67%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQG-KYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 ++S Y + G EA+ I M+D G++ ++VTYNA++ GK G ++ V +FDEM + P+ +T+++++ V SKGGL++ A + E G+ D+ Y+ L+DA+CK G ++ A Sbjct: 234 IISAYGRSGYCNEAIKIFYSMKDYGLKPNLVTYNAVIDACGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMA 353 HSP 5 Score: 70.0922 bits (170), Expect = 2.589e-11 Identity = 37/109 (33.94%), Postives = 61/109 (55.96%), Query Frame = -1 Query: 7 FEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 333 F+ L+I EM +GM+ D +T+N+LL K G ++ R+L EM + + ++ TY+T++D KGG D A ++ E + +VV YS +ID K G ++ A Sbjct: 280 FKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDA 388 HSP 6 Score: 67.3958 bits (163), Expect = 1.915e-10 Identity = 29/86 (33.72%), Postives = 54/86 (62.79%), Query Frame = -1 Query: 106 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMD 363 L+ +Y+K G + EA+D+ RE + +G++ DVV Y+AL+ K G + +L DEM + + PN++TY+++ID + + + +D Sbjct: 480 LIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRPATTESVVD 565 HSP 7 Score: 66.6254 bits (161), Expect = 3.828e-10 Identity = 36/122 (29.51%), Postives = 66/122 (54.10%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGL-YDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 ++S +LG+ E A + + G V ++A++ YG+ G +E +F MK + PNL+TY+ +ID KGG+ + +++F E G++ D + +++L+ K GL E+A S Sbjct: 199 MISTLGRLGKVEMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMKDYGLKPNLVTYNAVIDACGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAARS 320
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy TrEMBL
Match: B9I9H0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s11380g PE=4 SV=2) HSP 1 Score: 216.853 bits (551), Expect = 2.570e-63 Identity = 105/121 (86.78%), Postives = 114/121 (94.21%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 LLSIYAKLGRF+EALD+CREME+ G+R+DVVTYNALLGGYGKQ KYDEVR +F EMKA +VSPNLLTYST+IDVYSKGGLY EAMDVFREFK AGLKADVVLYSA+IDALCKNGLVESAVS Sbjct: 412 LLSIYAKLGRFQEALDVCREMENCGIRKDVVTYNALLGGYGKQCKYDEVRRVFGEMKAGRVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSAVIDALCKNGLVESAVS 532 HSP 2 Score: 85.8853 bits (211), Expect = 9.512e-17 Identity = 44/120 (36.67%), Postives = 72/120 (60.00%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 LL++ ++ G +E A + EM + G+ +D+ TYN LL K G+ D + EM A+ + PN++TYSTMID Y+K G +D+A+++F E K+ + D V Y+ L+ K G + A+ Sbjct: 307 LLAVCSRGGLWEAARSLSSEMLNRGIDQDIFTYNTLLDAVCKGGQMDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRFDDALNLFNEMKFLCISLDRVSYNTLLSIYAKLGRFQEAL 426 HSP 3 Score: 83.5741 bits (205), Expect = 6.504e-16 Identity = 41/107 (38.32%), Postives = 69/107 (64.49%), Query Frame = -1 Query: 43 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALI 363 LL K G+ + A +I EM + +VVTY+ ++ GY K G++D+ LF+EMK +S + ++Y+T++ +Y+K G + EA+DV RE + G++ DVV Y+AL+ Sbjct: 342 LLDAVCKGGQMDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRFDDALNLFNEMKFLCISLDRVSYNTLLSIYAKLGRFQEALDVCREMENCGIRKDVVTYNALL 448 HSP 4 Score: 80.1073 bits (196), Expect = 9.057e-15 Identity = 40/120 (33.33%), Postives = 74/120 (61.67%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQG-KYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 ++S Y + G +EA+ + M+ G++ ++VTYNA++ GK G ++ V +FDEM V P+ +T+++++ V S+GGL++ A + E G+ D+ Y+ L+DA+CK G ++ A Sbjct: 236 IISAYGRSGYCDEAIKVFDSMKHYGLKPNLVTYNAVIDACGKGGVEFKRVVEIFDEMLRNGVQPDRITFNSLLAVCSRGGLWEAARSLSSEMLNRGIDQDIFTYNTLLDAVCKGGQMDMA 355 HSP 5 Score: 68.1662 bits (165), Expect = 1.022e-10 Identity = 37/122 (30.33%), Postives = 66/122 (54.10%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGL-YDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 ++S +LG+ E A + G V ++A++ YG+ G DE +FD MK + PNL+TY+ +ID KGG+ + +++F E G++ D + +++L+ + GL E+A S Sbjct: 201 MISTLGRLGKVEIAKSVFEAALIEGYGNTVYAFSAIISAYGRSGYCDEAIKVFDSMKHYGLKPNLVTYNAVIDACGKGGVEFKRVVEIFDEMLRNGVQPDRITFNSLLAVCSRGGLWEAARS 322 HSP 6 Score: 67.781 bits (164), Expect = 1.619e-10 Identity = 28/86 (32.56%), Postives = 55/86 (63.95%), Query Frame = -1 Query: 106 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMD 363 L+ +Y+K G + EA+D+ RE + +G++ DVV Y+A++ K G + +L DEM + + PN++TY+++ID + + + + +D Sbjct: 482 LIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSAVIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAITESVVD 567 HSP 7 Score: 67.0106 bits (162), Expect = 2.685e-10 Identity = 34/111 (30.63%), Postives = 62/111 (55.86%), Query Frame = -1 Query: 1 FEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 333 F+ ++I EM +G++ D +T+N+LL + G ++ R+L EM + + ++ TY+T++D KGG D A ++ E + +VV YS +ID K G + A++ Sbjct: 282 FKRVVEIFDEMLRNGVQPDRITFNSLLAVCSRGGLWEAARSLSSEMLNRGIDQDIFTYNTLLDAVCKGGQMDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRFDDALN 392
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy Swiss-Prot
Match: PP123_ARATH (Pentatricopeptide repeat-containing protein At1g74750 OS=Arabidopsis thaliana GN=At1g74750 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.097e-17 Identity = 40/119 (33.61%), Postives = 71/119 (59.66%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L+ I+AK G + A+D+ + M+++G+ D TY+ ++ GK G LF EM Q +PNL+T++ MI +++K Y+ A+ ++R+ + AG + D V YS +++ L G +E A Sbjct: 435 LIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEA 553 HSP 2 Score: 78.9518 bits (193), Expect = 3.243e-16 Identity = 41/120 (34.17%), Postives = 66/120 (55.00%), Query Frame = -1 Query: 7 SIYAKLGR---FEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 357 ++ LGR F E + EM G + + VTYN L+ YG+ E +F++M+ P+ +TY T+ID+++K G D AMD+++ + AGL D YS +I+ L K G + +A Sbjct: 364 TMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAA 483 HSP 3 Score: 68.5514 bits (166), Expect = 9.009e-13 Identity = 33/96 (34.38%), Postives = 51/96 (53.12%), Query Frame = -1 Query: 4 GMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 291 G + D TY ++G G+ ++ E+ L DEM PN +TY+ +I Y + EAM+VF + + AG + D V Y LID K G ++ A+ Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAM 449 HSP 4 Score: 61.2326 bits (147), Expect = 2.789e-10 Identity = 30/112 (26.79%), Postives = 63/112 (56.25%), Query Frame = -1 Query: 28 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCK 363 +++++AK +E AL + R+M+++G + D VTY+ ++ G G +E +F EM+ + P+ Y ++D++ K G D+A ++ AGL+ +V ++L+ + Sbjct: 505 MIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLR 616
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy Swiss-Prot
Match: PP344_ARATH (Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.319e-17 Identity = 45/115 (39.13%), Postives = 64/115 (55.65%), Query Frame = -1 Query: 4 AKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 348 +K GR EA + M D G R + YN L+ G+GK G+ D ALF M + V P+L TYS ++D G DE + F+E K +GL DVV Y+ +I+ L K+ +E A+ Sbjct: 902 SKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEAL 1016 HSP 2 Score: 79.337 bits (194), Expect = 2.629e-16 Identity = 41/120 (34.17%), Postives = 71/120 (59.17%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQK-VSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L+ +GR +E L +E+++SG+ DVV YN ++ G GK + +E LF+EMK + ++P+L TY+++I G+ +EA ++ E + AGL+ +V ++ALI +G E A Sbjct: 967 LVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHA 1086 HSP 3 Score: 75.485 bits (184), Expect = 4.375e-15 Identity = 37/120 (30.83%), Postives = 65/120 (54.17%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 ++ Y+K+G +EA+ + EM ++G DV+ N+L+ K + DE +F MK K+ P ++TY+T++ K G EA+++F G + + ++ L D LCKN V A+ Sbjct: 509 MMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLAL 628 HSP 4 Score: 71.2478 bits (173), Expect = 1.339e-13 Identity = 37/113 (32.74%), Postives = 60/113 (53.10%), Query Frame = -1 Query: 22 LSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 360 + + + G+ EA +I + M+D G DVVTY L+ K D + +F++MK + P+ +TY T++D +S D + E + G DVV ++ L+DALCK G Sbjct: 265 IRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAG 377 HSP 5 Score: 70.4774 bits (171), Expect = 2.420e-13 Identity = 41/115 (35.65%), Postives = 60/115 (52.17%), Query Frame = -1 Query: 4 AKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 348 AK GR EA I ++D G+ D VTYN ++ Y K G+ DE L EM P+++ +++I+ K DEA +F K LK VV Y+ L+ L KNG ++ A+ Sbjct: 479 AKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAI 593 HSP 6 Score: 69.707 bits (169), Expect = 4.055e-13 Identity = 38/103 (36.89%), Postives = 57/103 (55.34%), Query Frame = -1 Query: 31 RF-EEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALC 336 RF EA+++ R M G R + TY++L+ G GK+ D V L EM+ + PN+ T++ I V + G +EA ++ + G DVV Y+ LIDALC Sbjct: 202 RFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALC 304 HSP 7 Score: 68.9366 bits (167), Expect = 9.422e-13 Identity = 40/120 (33.33%), Postives = 61/120 (50.83%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 L++ K R +EA + M++ ++ VVTYN LL G GK GK E LF+ M + PN +T++T+ D K A+ + + G DV Y+ +I L KNG V+ A+ Sbjct: 544 LINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAM 663 HSP 8 Score: 62.7734 bits (151), Expect = 9.534e-11 Identity = 37/114 (32.46%), Postives = 56/114 (49.12%), Query Frame = -1 Query: 22 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 363 L+ K G F EA D M D G+ ++ TYN L+ G + + D+ LF M++ V P TY ID Y K G A++ F + K G+ ++V +A + +L K G Sbjct: 369 LVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAG 482 HSP 9 Score: 62.3882 bits (150), Expect = 1.393e-10 Identity = 36/105 (34.29%), Postives = 54/105 (51.43%), Query Frame = -1 Query: 22 FEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKW-AGLKADVVLYSALIDALCKNG 333 E A D+ +++ +G DV TYN LL YGK GK DE+ L+ EM + N +T++ +I K G D+A+D++ + Y LID L K+G Sbjct: 801 IEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSG 905 HSP 10 Score: 61.6178 bits (148), Expect = 2.149e-10 Identity = 37/121 (30.58%), Postives = 59/121 (48.76%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICRE-MEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 ++S K G ++ALD+ + M D TY L+ G K G+ E + LF+ M PN Y+ +I+ + K G D A +F+ G++ D+ YS L+D LC G V+ + Sbjct: 861 VISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGL 981 HSP 11 Score: 59.6918 bits (143), Expect = 1.157e-9 Identity = 37/115 (32.17%), Postives = 61/115 (53.04%), Query Frame = -1 Query: 7 YAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 351 Y K G AL+ +M+ G+ ++V NA L K G+ E + +F +K + P+ +TY+ M+ YSK G DEA+ + E G + DV++ ++LI+ L K V+ A Sbjct: 443 YGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEA 557 HSP 12 Score: 58.5362 bits (140), Expect = 2.811e-9 Identity = 36/122 (29.51%), Postives = 59/122 (48.36%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRAL-FDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 LL Y K G+ +E ++ +EM + +T+N ++ G K G D+ L +D M + SP TY +ID SK G EA +F G + + +Y+ LI+ K G ++A + Sbjct: 826 LLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACA 947 HSP 13 Score: 56.6102 bits (135), Expect = 1.083e-8 Identity = 36/120 (30.00%), Postives = 65/120 (54.17%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWA-GLKADVVLYSALIDALCKNGLVESA 363 L++ + K G + A + + M G+R D+ TY+ L+ G+ DE F E+K ++P+++ Y+ +I+ K +EA+ +F E K + G+ D+ Y++LI L G+VE A Sbjct: 932 LINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEA 1051 HSP 14 Score: 54.6842 bits (130), Expect = 4.491e-8 Identity = 35/116 (30.17%), Postives = 61/116 (52.59%), Query Frame = -1 Query: 4 KLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRAL--FDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 345 ++ R ++AL++ ME G++ TY + YGK G D V AL F++MK + ++PN++ + + +K G EA +F K GL D V Y+ ++ K G ++ A+ Sbjct: 410 RVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSG--DSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAI 523 HSP 15 Score: 53.5286 bits (127), Expect = 1.029e-7 Identity = 34/101 (33.66%), Postives = 50/101 (49.50%), Query Frame = -1 Query: 4 EMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 306 EME G DVVT+ L+ K G + E D M+ Q + PNL TY+T+I + D+A+++F + G+K Y ID K+G SA+ Sbjct: 353 EMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSAL 453 HSP 16 Score: 53.5286 bits (127), Expect = 1.243e-7 Identity = 27/99 (27.27%), Postives = 56/99 (56.57%), Query Frame = -1 Query: 4 EDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 300 +D G++ + TYN L+GG + + + +F ++K+ P++ TY+ ++D Y K G DE ++++E +A+ + ++ +I L K G V+ A+ Sbjct: 777 KDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDAL 875 HSP 17 Score: 53.1434 bits (126), Expect = 1.435e-7 Identity = 31/114 (27.19%), Postives = 54/114 (47.37%), Query Frame = -1 Query: 25 SIYAKLGR---FEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKN 357 S+ LG+ + + + +EME G++ +V T+ + G+ GK +E + M + P+++TY+ +ID D A +VF + K K D V Y L+D N Sbjct: 228 SLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDN 341 HSP 18 Score: 53.1434 bits (126), Expect = 1.570e-7 Identity = 31/102 (30.39%), Postives = 52/102 (50.98%), Query Frame = -1 Query: 46 AKLGRFEEALDICREMEDS-GMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSAL 348 K R EEAL + EM+ S G+ D+ TYN+L+ G G +E +++E++ + PN+ T++ +I YS G + A V++ G + Y L Sbjct: 1007 GKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy Swiss-Prot
Match: PPR91_ARATH (Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=3 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 1.383e-17 Identity = 40/117 (34.19%), Postives = 68/117 (58.12%), Query Frame = -1 Query: 13 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVE 363 L+ + K R EE +++ REM G+ + VTYN L+ G + G D + +F EM + V PN++TY+T++D K G ++AM VF + + ++ + Y+ +I+ +CK G VE Sbjct: 402 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 518 HSP 2 Score: 74.7146 bits (182), Expect = 6.465e-15 Identity = 37/111 (33.33%), Postives = 61/111 (54.95%), Query Frame = -1 Query: 7 GRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 339 G + A +I +EM G+ +++TYN LL G K GK ++ +F+ ++ K+ P + TY+ MI+ K G ++ D+F G+K DVV Y+ +I C+ G E A Sbjct: 445 GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 555 HSP 3 Score: 70.8626 bits (172), Expect = 1.314e-13 Identity = 34/114 (29.82%), Postives = 65/114 (57.02%), Query Frame = -1 Query: 7 AKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 348 K ++AL++ +EME G+R +VVTY++L+ G++ + L +M +K++P++ T+S +ID + K G EA ++ E + +V YS+LI+ C + ++ A Sbjct: 267 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA 380 HSP 4 Score: 70.8626 bits (172), Expect = 1.418e-13 Identity = 36/102 (35.29%), Postives = 60/102 (58.82%), Query Frame = -1 Query: 22 EALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 327 EA+ + M G + D+VTY ++ G K+G D L ++M+ K+ P +L Y+T+ID K D+A+++F+E + G++ +VV YS+LI LC G Sbjct: 204 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYG 305 HSP 5 Score: 69.3218 bits (168), Expect = 3.878e-13 Identity = 36/114 (31.58%), Postives = 63/114 (55.26%), Query Frame = -1 Query: 22 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 363 L+ + K G+ EA + EM + +VTY++L+ G+ + DE + +F+ M ++ P+++TY+T+I + K +E M+VFRE GL + V Y+ LI L + G Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 445 HSP 6 Score: 68.9366 bits (167), Expect = 6.287e-13 Identity = 38/120 (31.67%), Postives = 63/120 (52.50%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 L+S GR+ +A + +M + + DV T++AL+ + K+GK E L+DEM + + P+++TYS++I+ + DEA +F DVV Y+ LI CK VE + Sbjct: 297 LISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGM 416 HSP 7 Score: 68.9366 bits (167), Expect = 6.782e-13 Identity = 38/120 (31.67%), Postives = 65/120 (54.17%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 L++ + R +EA + M DVVTYN L+ G+ K + +E +F EM + + N +TY+ +I + G D A ++F+E G+ +++ Y+ L+D LCKNG +E A+ Sbjct: 367 LINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM 486 HSP 8 Score: 67.0106 bits (162), Expect = 2.935e-12 Identity = 36/112 (32.14%), Postives = 60/112 (53.57%), Query Frame = -1 Query: 28 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCK 363 LL+ Y R EA+ + +M +G + + VT+N L+ G K E AL D M A+ P+L+TY +++ K G D A ++ + + L+ V++Y+ +ID LCK Sbjct: 157 LLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCK 268 HSP 9 Score: 62.7734 bits (151), Expect = 8.546e-11 Identity = 36/114 (31.58%), Postives = 59/114 (51.75%), Query Frame = -1 Query: 10 AKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG-LVES 348 K G + A ++ +ME + V+ YN ++ G K D+ LF EM+ + + PN++TYS++I G + +A + + + DV +SALIDA K G LVE+ Sbjct: 232 CKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEA 345 HSP 10 Score: 58.5362 bits (140), Expect = 2.148e-9 Identity = 36/119 (30.25%), Postives = 64/119 (53.78%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 LL K G+ E+A+ + ++ S M + TYN ++ G K GK ++ LF + + V P+++ Y+TMI + + G +EA +F+E K G + Y+ LI A ++G E++ Sbjct: 472 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREAS 590 HSP 11 Score: 58.151 bits (139), Expect = 2.913e-9 Identity = 32/114 (28.07%), Postives = 55/114 (48.25%), Query Frame = -1 Query: 22 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 363 L++ + + + AL + +M G ++VT ++LL GY + E AL D+M PN +T++T+I EAM + G + D+V Y +++ LCK G Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRG 235 HSP 12 Score: 56.6102 bits (135), Expect = 9.814e-9 Identity = 28/94 (29.79%), Postives = 49/94 (52.13%), Query Frame = -1 Query: 67 AKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKAD 348 K G+ E+ D+ + G++ DVV YN ++ G+ ++G +E ALF EMK PN Y+T+I + G + + ++ +E + G D Sbjct: 512 CKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 605
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy Swiss-Prot
Match: PP306_ARATH (Pentatricopeptide repeat-containing protein At4g11690 OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.403e-17 Identity = 38/108 (35.19%), Postives = 66/108 (61.11%), Query Frame = -1 Query: 22 KLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 345 K GR ++A + EM + G+ ++VTYN L+GG ++ K +E + D+MK+ ++PNL+TY+T+ID + G +A+ + R+ K GL +V Y+ L+ C+ G Sbjct: 280 KDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKG 387 HSP 2 Score: 69.3218 bits (168), Expect = 4.359e-13 Identity = 33/119 (27.73%), Postives = 65/119 (54.62%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L+ + +G+ +AL +CR+++ G+ +VTYN L+ G+ ++G + EM+ + + P+ +TY+ +ID +++ ++A+ + + GL DV YS LI C G + A Sbjct: 344 LIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEA 462 HSP 3 Score: 65.4698 bits (158), Expect = 9.144e-12 Identity = 36/112 (32.14%), Postives = 60/112 (53.57%), Query Frame = -1 Query: 28 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCK 363 L+ +A+ E+A+ + ME+ G+ DV TY+ L+ G+ +G+ +E LF M + PN + Y+TMI Y K G A+ + +E + L +V Y +I+ LCK Sbjct: 414 LIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCK 525 HSP 4 Score: 61.6178 bits (148), Expect = 1.593e-10 Identity = 30/111 (27.03%), Postives = 63/111 (56.76%), Query Frame = -1 Query: 4 RFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 336 + EA + +M+ G+ +++TYN L+ G+ GK + +L ++K++ +SP+L+TY+ ++ + + G A + +E + G+K V Y+ LID ++ +E A+ Sbjct: 318 KLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAI 428 HSP 5 Score: 61.6178 bits (148), Expect = 1.851e-10 Identity = 33/115 (28.70%), Postives = 64/115 (55.65%), Query Frame = -1 Query: 1 KLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 345 K G ++ ++ +M++ G+ ++ TYN ++ K G+ + +FDEM+ + VS N++TY+T+I + +EA V + K G+ +++ Y+ LID C G + A+S Sbjct: 245 KNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALS 359 HSP 6 Score: 61.6178 bits (148), Expect = 1.868e-10 Identity = 34/106 (32.08%), Postives = 56/106 (52.83%), Query Frame = -1 Query: 28 KLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCK 345 K G E+A D+ EM G+ + TY L+ G K G + ++++M+ V PNL TY+ +++ K G +A VF E + G+ ++V Y+ LI LC+ Sbjct: 210 KKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCR 315 HSP 7 Score: 57.3806 bits (137), Expect = 4.249e-9 Identity = 29/111 (26.13%), Postives = 61/111 (54.95%), Query Frame = -1 Query: 7 GRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 339 G E++ D+ E+ + G +VV Y L+ G K+G+ ++ + LF EM + N TY+ +I+ K G+ + +++ + + G+ ++ Y+ +++ LCK+G + A Sbjct: 177 GEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDA 287 HSP 8 Score: 50.8322 bits (120), Expect = 6.366e-7 Identity = 30/87 (34.48%), Postives = 49/87 (56.32%), Query Frame = -1 Query: 19 DVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGL 279 DV ++ L+ G + G+ ++ L E+ SPN++ Y+T+ID K G ++A D+F E GL A+ Y+ LI+ L KNG+ Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGV 248
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy Swiss-Prot
Match: PPR49_ARATH (Pentatricopeptide repeat-containing protein At1g18900 OS=Arabidopsis thaliana GN=At1g18900 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.454e-17 Identity = 41/119 (34.45%), Postives = 69/119 (57.98%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L+ I+AK G + A+D+ + M+ G+ D TY+ ++ GK G LF EM Q +PNL+TY+ M+D+++K Y A+ ++R+ + AG + D V YS +++ L G +E A Sbjct: 440 LIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEA 558 HSP 2 Score: 75.8702 bits (185), Expect = 2.843e-15 Identity = 38/113 (33.63%), Postives = 63/113 (55.75%), Query Frame = -1 Query: 7 KLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 345 + G + LD EM G + + VTYN L+ YG+ +E +F++M+ P+ +TY T+ID+++K G D AMD+++ + GL D YS +I+ L K G + +A Sbjct: 379 QFGAINKLLD---EMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAA 488 HSP 3 Score: 68.5514 bits (166), Expect = 8.951e-13 Identity = 33/96 (34.38%), Postives = 51/96 (53.12%), Query Frame = -1 Query: 4 GMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 291 G + D TY ++G G+ ++ + L DEM PN +TY+ +I Y + +EAM+VF + + AG K D V Y LID K G ++ A+ Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAM 454 HSP 4 Score: 60.077 bits (144), Expect = 7.437e-10 Identity = 31/119 (26.05%), Postives = 66/119 (55.46%), Query Frame = -1 Query: 10 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCK-NGLVES 363 ++ ++AK ++ AL + R+M+++G D VTY+ ++ G G +E A+F EM+ + P+ Y ++D++ K G ++A ++ AGL+ +V ++L+ + N + E+ Sbjct: 510 MMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEA 628 HSP 5 Score: 59.3066 bits (142), Expect = 1.403e-9 Identity = 31/108 (28.70%), Postives = 56/108 (51.85%), Query Frame = -1 Query: 40 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALID 363 L+ Y + EA+++ +M+++G + D VTY L+ + K G D ++ M+A +SP+ TYS +I+ K G A +F E G ++V Y+ ++D Sbjct: 405 LIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD 512 HSP 6 Score: 56.9954 bits (136), Expect = 6.425e-9 Identity = 35/119 (29.41%), Postives = 56/119 (47.06%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 +++ K G A + EM D G ++VTYN ++ + K Y L+ +M+ P+ +TYS +++V G +EA VF E + D +Y L+D K G VE A Sbjct: 475 IINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKA 593 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0010846 ID=g.arboreum_cottongen_reftransV1_0010846; Name=g.arboreum_cottongen_reftransV1_0010846; organism=Gossypium arboreum; type=contig; length=363bpback to top |