g.arboreum_cottongen_reftransV1_0010846, g.arboreum_cottongen_reftransV1_0010846 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy TrEMBL
Match: A0A0B0NS02_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_16601 PE=4 SV=1) HSP 1 Score: 249.595 bits (636), Expect = 4.488e-75 Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS Sbjct: 398 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 518 HSP 2 Score: 90.8929 bits (224), Expect = 1.952e-18 Identity = 46/120 (38.33%), Postives = 73/120 (60.83%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 LL++ ++ G +E A ++ EM D G+ RD+ TYN L K G+ D + EM A+ + PN++TYSTM+D Y+K G +D+A+++F E K+ G+ D V Y+ L+ K G E A+ Sbjct: 293 LLAVCSRGGLWEAARNLFSEMVDRGIDRDIFTYNTFLDAVCKGGQMDLAFEIMAEMPAKNIFPNVITYSTMVDGYAKAGRFDDALNLFNEMKFLGIGLDRVSYNTLLSIYAKLGRFEEAL 412 HSP 3 Score: 80.8777 bits (198), Expect = 6.066e-15 Identity = 40/120 (33.33%), Postives = 75/120 (62.50%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQG-KYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L+S + + G +EAL + M++ G++ ++V YNA++ GK G ++ V +FDEM V P+ +T+++++ V S+GGL++ A ++F E G+ D+ Y+ +DA+CK G ++ A Sbjct: 222 LISAFGRSGYCDEALKVFDSMKNYGLKPNLVIYNAVIDACGKGGLEFKRVVEIFDEMLRSGVQPDRITFNSLLAVCSRGGLWEAARNLFSEMVDRGIDRDIFTYNTFLDAVCKGGQMDLA 341 HSP 4 Score: 80.4925 bits (197), Expect = 6.610e-15 Identity = 39/114 (34.21%), Postives = 71/114 (62.28%), Query Frame = -1 Query: 22 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 363 L K G+ + A +I EM + +V+TY+ ++ GY K G++D+ LF+EMK + + ++Y+T++ +Y+K G ++EA+D+ RE + +G++ DVV Y+AL+ K G Sbjct: 328 FLDAVCKGGQMDLAFEIMAEMPAKNIFPNVITYSTMVDGYAKAGRFDDALNLFNEMKFLGIGLDRVSYNTLLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQG 441 HSP 5 Score: 72.7886 bits (177), Expect = 2.802e-12 Identity = 38/120 (31.67%), Postives = 68/120 (56.67%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGL-YDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 ++SI +LG+ E A I + G + V ++AL+ +G+ G DE +FD MK + PNL+ Y+ +ID KGGL + +++F E +G++ D + +++L+ + GL E+A Sbjct: 187 MISILGRLGKVELARGIFHTALNEGYGKTVYAFSALISAFGRSGYCDEALKVFDSMKNYGLKPNLVIYNAVIDACGKGGLEFKRVVEIFDEMLRSGVQPDRITFNSLLAVCSRGGLWEAA 306 HSP 6 Score: 67.781 bits (164), Expect = 1.477e-10 Identity = 29/86 (33.72%), Postives = 55/86 (63.95%), Query Frame = -1 Query: 106 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMD 363 ++ +Y+K G ++EA+D+ RE + +G++ DVV Y+AL+ K G + +L DEM + + PN++TY+++ID + + + A D Sbjct: 468 MIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATSEHAFD 553
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy TrEMBL
Match: A0A0D2SBY3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G121300 PE=4 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 1.034e-71 Identity = 118/121 (97.52%), Postives = 119/121 (98.35%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYST+IDVYSKGGLYDEAMDVFREFK AGLKADVVLYSALIDALCKNGLVE AVS Sbjct: 398 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTVIDVYSKGGLYDEAMDVFREFKRAGLKADVVLYSALIDALCKNGLVEYAVS 518 HSP 2 Score: 90.5077 bits (223), Expect = 2.159e-18 Identity = 46/120 (38.33%), Postives = 73/120 (60.83%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 LL++ ++ G +E A ++ EM D G+ RD+ TYN L K G+ D + EM A+ + PN++TYSTM+D Y+K G +D+A+++F E K+ G+ D V Y+ L+ K G E A+ Sbjct: 293 LLAVCSRGGLWEAASNLFSEMVDRGIDRDIFTYNTFLDAVCKGGQMDLAFEIMAEMPAKNIFPNVITYSTMVDGYAKAGRFDDALNLFNEMKFLGIGLDRVSYNTLLSIYAKLGRFEEAL 412 HSP 3 Score: 80.4925 bits (197), Expect = 6.347e-15 Identity = 40/120 (33.33%), Postives = 75/120 (62.50%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQG-KYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L+S + + G +EAL + M++ G++ ++V YNA++ GK G ++ V +FDEM V P+ +T+++++ V S+GGL++ A ++F E G+ D+ Y+ +DA+CK G ++ A Sbjct: 222 LISAFGRSGYCDEALKVFDSMKNYGLKPNLVIYNAVIDACGKGGLEFKRVVEIFDEMLRSGVQPDRITFNSLLAVCSRGGLWEAASNLFSEMVDRGIDRDIFTYNTFLDAVCKGGQMDLA 341 HSP 4 Score: 80.4925 bits (197), Expect = 6.347e-15 Identity = 39/114 (34.21%), Postives = 71/114 (62.28%), Query Frame = -1 Query: 22 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 363 L K G+ + A +I EM + +V+TY+ ++ GY K G++D+ LF+EMK + + ++Y+T++ +Y+K G ++EA+D+ RE + +G++ DVV Y+AL+ K G Sbjct: 328 FLDAVCKGGQMDLAFEIMAEMPAKNIFPNVITYSTMVDGYAKAGRFDDALNLFNEMKFLGIGLDRVSYNTLLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQG 441 HSP 5 Score: 72.0182 bits (175), Expect = 5.144e-12 Identity = 37/120 (30.83%), Postives = 68/120 (56.67%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGL-YDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 ++SI +LG+ E A + + G + V ++AL+ +G+ G DE +FD MK + PNL+ Y+ +ID KGGL + +++F E +G++ D + +++L+ + GL E+A Sbjct: 187 MISILGRLGKVELARGVFHTALNEGYGKTVYAFSALISAFGRSGYCDEALKVFDSMKNYGLKPNLVIYNAVIDACGKGGLEFKRVVEIFDEMLRSGVQPDRITFNSLLAVCSRGGLWEAA 306 HSP 6 Score: 65.4698 bits (158), Expect = 8.374e-10 Identity = 28/86 (32.56%), Postives = 54/86 (62.79%), Query Frame = -1 Query: 106 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMD 363 ++ +Y+K G ++EA+D+ RE + +G++ DVV Y+AL+ K G + +L DEM + + PN++TY+++ID + + + D Sbjct: 468 VIDVYSKGGLYDEAMDVFREFKRAGLKADVVLYSALIDALCKNGLVEYAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATSEHVFD 553
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy TrEMBL
Match: A0A0D2QR84_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G121300 PE=4 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 2.192e-71 Identity = 118/121 (97.52%), Postives = 119/121 (98.35%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYST+IDVYSKGGLYDEAMDVFREFK AGLKADVVLYSALIDALCKNGLVE AVS Sbjct: 398 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTVIDVYSKGGLYDEAMDVFREFKRAGLKADVVLYSALIDALCKNGLVEYAVS 518 HSP 2 Score: 90.5077 bits (223), Expect = 2.211e-18 Identity = 46/120 (38.33%), Postives = 73/120 (60.83%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 LL++ ++ G +E A ++ EM D G+ RD+ TYN L K G+ D + EM A+ + PN++TYSTM+D Y+K G +D+A+++F E K+ G+ D V Y+ L+ K G E A+ Sbjct: 293 LLAVCSRGGLWEAASNLFSEMVDRGIDRDIFTYNTFLDAVCKGGQMDLAFEIMAEMPAKNIFPNVITYSTMVDGYAKAGRFDDALNLFNEMKFLGIGLDRVSYNTLLSIYAKLGRFEEAL 412 HSP 3 Score: 80.4925 bits (197), Expect = 6.423e-15 Identity = 40/120 (33.33%), Postives = 75/120 (62.50%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQG-KYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L+S + + G +EAL + M++ G++ ++V YNA++ GK G ++ V +FDEM V P+ +T+++++ V S+GGL++ A ++F E G+ D+ Y+ +DA+CK G ++ A Sbjct: 222 LISAFGRSGYCDEALKVFDSMKNYGLKPNLVIYNAVIDACGKGGLEFKRVVEIFDEMLRSGVQPDRITFNSLLAVCSRGGLWEAASNLFSEMVDRGIDRDIFTYNTFLDAVCKGGQMDLA 341 HSP 4 Score: 80.4925 bits (197), Expect = 6.547e-15 Identity = 39/114 (34.21%), Postives = 71/114 (62.28%), Query Frame = -1 Query: 22 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 363 L K G+ + A +I EM + +V+TY+ ++ GY K G++D+ LF+EMK + + ++Y+T++ +Y+K G ++EA+D+ RE + +G++ DVV Y+AL+ K G Sbjct: 328 FLDAVCKGGQMDLAFEIMAEMPAKNIFPNVITYSTMVDGYAKAGRFDDALNLFNEMKFLGIGLDRVSYNTLLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQG 441 HSP 5 Score: 72.4034 bits (176), Expect = 4.712e-12 Identity = 37/120 (30.83%), Postives = 68/120 (56.67%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGL-YDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 ++SI +LG+ E A + + G + V ++AL+ +G+ G DE +FD MK + PNL+ Y+ +ID KGGL + +++F E +G++ D + +++L+ + GL E+A Sbjct: 187 MISILGRLGKVELARGVFHTALNEGYGKTVYAFSALISAFGRSGYCDEALKVFDSMKNYGLKPNLVIYNAVIDACGKGGLEFKRVVEIFDEMLRSGVQPDRITFNSLLAVCSRGGLWEAA 306 HSP 6 Score: 65.4698 bits (158), Expect = 8.504e-10 Identity = 28/86 (32.56%), Postives = 54/86 (62.79%), Query Frame = -1 Query: 106 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMD 363 ++ +Y+K G ++EA+D+ RE + +G++ DVV Y+AL+ K G + +L DEM + + PN++TY+++ID + + + D Sbjct: 468 VIDVYSKGGLYDEAMDVFREFKRAGLKADVVLYSALIDALCKNGLVEYAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATSEHVFD 553
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy TrEMBL
Match: A0A0D2REW6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G138300 PE=4 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 1.629e-68 Identity = 113/121 (93.39%), Postives = 118/121 (97.52%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 LLSIYAKLGRFEEALDICREME SG+R+DVVTYNALLGGYGKQGKYDEVR LFDEMKAQ+VSPNLLTYST+IDVYSKGGLY+EAMDVFREFK AGLKADVVLYSALIDALCKNGLVESAVS Sbjct: 404 LLSIYAKLGRFEEALDICREMEGSGIRKDVVTYNALLGGYGKQGKYDEVRRLFDEMKAQRVSPNLLTYSTVIDVYSKGGLYEEAMDVFREFKRAGLKADVVLYSALIDALCKNGLVESAVS 524 HSP 2 Score: 88.9669 bits (219), Expect = 7.311e-18 Identity = 43/120 (35.83%), Postives = 79/120 (65.83%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQG-KYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L+S Y + G ++EA+ + M++ G++ + VTYNA++ GK G ++ V +FDEM + V P+ +T+++++ V S+GGL++ AM++F E G+ D+ Y+ L+DA+CK G ++ A Sbjct: 229 LISAYGRSGYYDEAIKVFDSMKNYGLKPNSVTYNAVIDACGKGGVEFKRVVEIFDEMLSGGVQPDRITFNSLLAVCSRGGLWEAAMNLFSEMVNRGIDRDIFTYNTLLDAVCKGGQMDLA 348 HSP 3 Score: 85.1149 bits (209), Expect = 1.494e-16 Identity = 46/120 (38.33%), Postives = 75/120 (62.50%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 LL++ ++ G +E A+++ EM + G+ RD+ TYN LL K G+ D + +EM A V PN++TYST+ID Y+K G +++A+++F E K+ G+ D V Y+ L+ K G E A+ Sbjct: 300 LLAVCSRGGLWEAAMNLFSEMVNRGIDRDIFTYNTLLDAVCKGGQMDLAFDIMEEMPAN-VLPNVVTYSTIIDGYAKAGRFNDALNLFNEMKFLGIGLDRVSYNTLLSIYAKLGRFEEAL 418 HSP 4 Score: 80.8777 bits (198), Expect = 4.744e-15 Identity = 41/114 (35.96%), Postives = 73/114 (64.04%), Query Frame = -1 Query: 22 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 363 LL K G+ + A DI EM + + +VVTY+ ++ GY K G++++ LF+EMK + + ++Y+T++ +Y+K G ++EA+D+ RE + +G++ DVV Y+AL+ K G Sbjct: 335 LLDAVCKGGQMDLAFDIMEEMP-ANVLPNVVTYSTIIDGYAKAGRFNDALNLFNEMKFLGIGLDRVSYNTLLSIYAKLGRFEEALDICREMEGSGIRKDVVTYNALLGGYGKQG 447 HSP 5 Score: 74.7146 bits (182), Expect = 5.673e-13 Identity = 39/122 (31.97%), Postives = 69/122 (56.56%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGL-YDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 ++SI +LG+ E A+ I G V ++AL+ YG+ G YDE +FD MK + PN +TY+ +ID KGG+ + +++F E G++ D + +++L+ + GL E+A++ Sbjct: 194 MISILGRLGKVELAMGIFETALREGYGNTVYAFSALISAYGRSGYYDEAIKVFDSMKNYGLKPNSVTYNAVIDACGKGGVEFKRVVEIFDEMLSGGVQPDRITFNSLLAVCSRGGLWEAAMN 315 HSP 6 Score: 66.2402 bits (160), Expect = 5.262e-10 Identity = 28/77 (36.36%), Postives = 52/77 (67.53%), Query Frame = -1 Query: 133 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSK 363 ++ +Y+K G +EEA+D+ RE + +G++ DVV Y+AL+ K G + +L DEM + + PN++TY+++ID + + Sbjct: 474 VIDVYSKGGLYEEAMDVFREFKRAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 550 HSP 7 Score: 65.0846 bits (157), Expect = 1.245e-9 Identity = 36/111 (32.43%), Postives = 60/111 (54.05%), Query Frame = -1 Query: 1 FEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 333 F+ ++I EM G++ D +T+N+LL + G ++ LF EM + + ++ TY+T++D KGG D A D+ E A + +VV YS +ID K G A++ Sbjct: 275 FKRVVEIFDEMLSGGVQPDRITFNSLLAVCSRGGLWEAAMNLFSEMVNRGIDRDIFTYNTLLDAVCKGGQMDLAFDIMEEMP-ANVLPNVVTYSTIIDGYAKAGRFNDALN 384
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy TrEMBL
Match: A0A0B0PW05_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_05807 PE=4 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 1.820e-68 Identity = 113/121 (93.39%), Postives = 118/121 (97.52%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 LLSIYAKLGRFEEALDICREME SG+R+DVVTYNALLGGYGKQGKYDEVR LFDEMKAQ+VSPNLLTYST+IDVYSKGGLY+EAMDVFREFK AGLKADVVLYSALIDALCKNGLVESAVS Sbjct: 404 LLSIYAKLGRFEEALDICREMEGSGIRKDVVTYNALLGGYGKQGKYDEVRRLFDEMKAQRVSPNLLTYSTVIDVYSKGGLYEEAMDVFREFKRAGLKADVVLYSALIDALCKNGLVESAVS 524 HSP 2 Score: 89.3521 bits (220), Expect = 6.238e-18 Identity = 43/120 (35.83%), Postives = 79/120 (65.83%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQG-KYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L+S Y + G ++EA+ + M++ G++ + VTYNA++ GK G ++ V +FDEM + V P+ +T+++++ V S+GGL++ AM++F E G+ D+ Y+ L+DA+CK G ++ A Sbjct: 229 LISAYGRSGYYDEAIKVFDSMKNYGLKPNSVTYNAVIDACGKGGVEFKRVVEIFDEMLSGGVQPDRITFNSLLAVCSRGGLWEAAMNLFSEMVNRGIDRDIFTYNTLLDAVCKGGQMDLA 348 HSP 3 Score: 83.5741 bits (205), Expect = 7.080e-16 Identity = 46/120 (38.33%), Postives = 73/120 (60.83%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 LL++ ++ G +E A+++ EM + G+ RD+ TYN LL K G+ D + EM A V PN++TYSTMID Y+K +++A+++F E K+ G+ D V Y+ L+ K G E A+ Sbjct: 300 LLAVCSRGGLWEAAMNLFSEMVNRGIDRDIFTYNTLLDAVCKGGQMDLAFDIMAEMPAN-VLPNVVTYSTMIDGYAKASRFNDALNLFNEMKFLGIGLDRVSYNTLLSIYAKLGRFEEAL 418 HSP 4 Score: 78.1814 bits (191), Expect = 4.154e-14 Identity = 40/114 (35.09%), Postives = 72/114 (63.16%), Query Frame = -1 Query: 22 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 363 LL K G+ + A DI EM + + +VVTY+ ++ GY K ++++ LF+EMK + + ++Y+T++ +Y+K G ++EA+D+ RE + +G++ DVV Y+AL+ K G Sbjct: 335 LLDAVCKGGQMDLAFDIMAEMP-ANVLPNVVTYSTMIDGYAKASRFNDALNLFNEMKFLGIGLDRVSYNTLLSIYAKLGRFEEALDICREMEGSGIRKDVVTYNALLGGYGKQG 447 HSP 5 Score: 75.0998 bits (183), Expect = 5.098e-13 Identity = 39/122 (31.97%), Postives = 69/122 (56.56%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGL-YDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 ++SI +LG+ E A+ I G V ++AL+ YG+ G YDE +FD MK + PN +TY+ +ID KGG+ + +++F E G++ D + +++L+ + GL E+A++ Sbjct: 194 MISILGRLGKVELAMGIFETALREGYGNTVYAFSALISAYGRSGYYDEAIKVFDSMKNYGLKPNSVTYNAVIDACGKGGVEFKRVVEIFDEMLSGGVQPDRITFNSLLAVCSRGGLWEAAMN 315 HSP 6 Score: 66.2402 bits (160), Expect = 4.589e-10 Identity = 28/77 (36.36%), Postives = 52/77 (67.53%), Query Frame = -1 Query: 133 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSK 363 ++ +Y+K G +EEA+D+ RE + +G++ DVV Y+AL+ K G + +L DEM + + PN++TY+++ID + + Sbjct: 474 VIDVYSKGGLYEEAMDVFREFKRAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 550 HSP 7 Score: 62.7734 bits (151), Expect = 6.975e-9 Identity = 34/102 (33.33%), Postives = 56/102 (54.90%), Query Frame = -1 Query: 28 FEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCK 333 F+ ++I EM G++ D +T+N+LL + G ++ LF EM + + ++ TY+T++D KGG D A D+ E A + +VV YS +ID K Sbjct: 275 FKRVVEIFDEMLSGGVQPDRITFNSLLAVCSRGGLWEAAMNLFSEMVNRGIDRDIFTYNTLLDAVCKGGQMDLAFDIMAEMP-ANVLPNVVTYSTMIDGYAK 375
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy TrEMBL
Match: A0A0D2PUG7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G138300 PE=4 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 2.411e-68 Identity = 113/121 (93.39%), Postives = 118/121 (97.52%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 LLSIYAKLGRFEEALDICREME SG+R+DVVTYNALLGGYGKQGKYDEVR LFDEMKAQ+VSPNLLTYST+IDVYSKGGLY+EAMDVFREFK AGLKADVVLYSALIDALCKNGLVESAVS Sbjct: 491 LLSIYAKLGRFEEALDICREMEGSGIRKDVVTYNALLGGYGKQGKYDEVRRLFDEMKAQRVSPNLLTYSTVIDVYSKGGLYEEAMDVFREFKRAGLKADVVLYSALIDALCKNGLVESAVS 611 HSP 2 Score: 89.3521 bits (220), Expect = 7.631e-18 Identity = 43/120 (35.83%), Postives = 79/120 (65.83%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQG-KYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L+S Y + G ++EA+ + M++ G++ + VTYNA++ GK G ++ V +FDEM + V P+ +T+++++ V S+GGL++ AM++F E G+ D+ Y+ L+DA+CK G ++ A Sbjct: 316 LISAYGRSGYYDEAIKVFDSMKNYGLKPNSVTYNAVIDACGKGGVEFKRVVEIFDEMLSGGVQPDRITFNSLLAVCSRGGLWEAAMNLFSEMVNRGIDRDIFTYNTLLDAVCKGGQMDLA 435 HSP 3 Score: 85.5001 bits (210), Expect = 1.385e-16 Identity = 46/120 (38.33%), Postives = 75/120 (62.50%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 LL++ ++ G +E A+++ EM + G+ RD+ TYN LL K G+ D + +EM A V PN++TYST+ID Y+K G +++A+++F E K+ G+ D V Y+ L+ K G E A+ Sbjct: 387 LLAVCSRGGLWEAAMNLFSEMVNRGIDRDIFTYNTLLDAVCKGGQMDLAFDIMEEMPAN-VLPNVVTYSTIIDGYAKAGRFNDALNLFNEMKFLGIGLDRVSYNTLLSIYAKLGRFEEAL 505 HSP 4 Score: 80.8777 bits (198), Expect = 4.998e-15 Identity = 41/114 (35.96%), Postives = 73/114 (64.04%), Query Frame = -1 Query: 22 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 363 LL K G+ + A DI EM + + +VVTY+ ++ GY K G++++ LF+EMK + + ++Y+T++ +Y+K G ++EA+D+ RE + +G++ DVV Y+AL+ K G Sbjct: 422 LLDAVCKGGQMDLAFDIMEEMP-ANVLPNVVTYSTIIDGYAKAGRFNDALNLFNEMKFLGIGLDRVSYNTLLSIYAKLGRFEEALDICREMEGSGIRKDVVTYNALLGGYGKQG 534 HSP 5 Score: 75.0998 bits (183), Expect = 5.867e-13 Identity = 39/122 (31.97%), Postives = 69/122 (56.56%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGL-YDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 ++SI +LG+ E A+ I G V ++AL+ YG+ G YDE +FD MK + PN +TY+ +ID KGG+ + +++F E G++ D + +++L+ + GL E+A++ Sbjct: 281 MISILGRLGKVELAMGIFETALREGYGNTVYAFSALISAYGRSGYYDEAIKVFDSMKNYGLKPNSVTYNAVIDACGKGGVEFKRVVEIFDEMLSGGVQPDRITFNSLLAVCSRGGLWEAAMN 402 HSP 6 Score: 66.2402 bits (160), Expect = 4.979e-10 Identity = 28/77 (36.36%), Postives = 52/77 (67.53%), Query Frame = -1 Query: 133 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSK 363 ++ +Y+K G +EEA+D+ RE + +G++ DVV Y+AL+ K G + +L DEM + + PN++TY+++ID + + Sbjct: 561 VIDVYSKGGLYEEAMDVFREFKRAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGR 637 HSP 7 Score: 65.4698 bits (158), Expect = 1.031e-9 Identity = 36/111 (32.43%), Postives = 60/111 (54.05%), Query Frame = -1 Query: 1 FEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 333 F+ ++I EM G++ D +T+N+LL + G ++ LF EM + + ++ TY+T++D KGG D A D+ E A + +VV YS +ID K G A++ Sbjct: 362 FKRVVEIFDEMLSGGVQPDRITFNSLLAVCSRGGLWEAAMNLFSEMVNRGIDRDIFTYNTLLDAVCKGGQMDLAFDIMEEMP-ANVLPNVVTYSTIIDGYAKAGRFNDALN 471
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy TrEMBL
Match: A0A061DZ63_THECC (S uncoupled 1 OS=Theobroma cacao GN=TCM_004835 PE=4 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 2.207e-67 Identity = 110/121 (90.91%), Postives = 116/121 (95.87%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 +LSIYAKLGRFEEALDICREME SG+R+DVVTYNALLGGYGKQGKYDEVR LF+EMK QKVSPNLLTYST+IDVYSKGGLY+EAMDVFREFK GLKADVVLYSALIDALCKNGLVESAVS Sbjct: 402 VLSIYAKLGRFEEALDICREMEGSGIRKDVVTYNALLGGYGKQGKYDEVRRLFEEMKTQKVSPNLLTYSTVIDVYSKGGLYEEAMDVFREFKRVGLKADVVLYSALIDALCKNGLVESAVS 522 HSP 2 Score: 87.0409 bits (214), Expect = 4.558e-17 Identity = 41/120 (34.17%), Postives = 78/120 (65.00%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQG-KYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L+S + + G +EA+ + M+++G++ ++VTYNA++ GK G ++ V +FDEM V P+ +T+++++ V S+GGL++ A ++F E G+ D+ Y+ L+DA+CK G ++ A Sbjct: 226 LISAFGRSGYSDEAIKVFDSMKNNGLKPNLVTYNAVIDACGKGGVEFKRVVEIFDEMLRSGVQPDRITFNSLLAVCSRGGLWEAARNLFSEMVHRGIDQDIFTYNTLLDAVCKGGQMDLA 345 HSP 3 Score: 87.0409 bits (214), Expect = 4.646e-17 Identity = 44/120 (36.67%), Postives = 72/120 (60.00%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 LL++ ++ G +E A ++ EM G+ +D+ TYN LL K G+ D + EM + + PN++TYSTMID Y+K G +D+A+++F E K+ G+ D V Y+ ++ K G E A+ Sbjct: 297 LLAVCSRGGLWEAARNLFSEMVHRGIDQDIFTYNTLLDAVCKGGQMDLAFEIMAEMPTKNILPNVVTYSTMIDGYAKAGRFDDALNLFNEMKFLGIGLDRVSYNTVLSIYAKLGRFEEAL 416 HSP 4 Score: 86.2705 bits (212), Expect = 6.750e-17 Identity = 41/114 (35.96%), Postives = 72/114 (63.16%), Query Frame = -1 Query: 22 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 363 LL K G+ + A +I EM + +VVTY+ ++ GY K G++D+ LF+EMK + + ++Y+T++ +Y+K G ++EA+D+ RE + +G++ DVV Y+AL+ K G Sbjct: 332 LLDAVCKGGQMDLAFEIMAEMPTKNILPNVVTYSTMIDGYAKAGRFDDALNLFNEMKFLGIGLDRVSYNTVLSIYAKLGRFEEALDICREMEGSGIRKDVVTYNALLGGYGKQG 445 HSP 5 Score: 73.559 bits (179), Expect = 1.718e-12 Identity = 38/120 (31.67%), Postives = 67/120 (55.83%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGL-YDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 ++SI +LG+ E A I G V ++AL+ +G+ G DE +FD MK + PNL+TY+ +ID KGG+ + +++F E +G++ D + +++L+ + GL E+A Sbjct: 191 MISILGRLGKVELAKGIFETALTEGYGNTVYAFSALISAFGRSGYSDEAIKVFDSMKNNGLKPNLVTYNAVIDACGKGGVEFKRVVEIFDEMLRSGVQPDRITFNSLLAVCSRGGLWEAA 310 HSP 6 Score: 70.8626 bits (172), Expect = 1.321e-11 Identity = 36/111 (32.43%), Postives = 62/111 (55.86%), Query Frame = -1 Query: 1 FEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 333 F+ ++I EM SG++ D +T+N+LL + G ++ R LF EM + + ++ TY+T++D KGG D A ++ E + +VV YS +ID K G + A++ Sbjct: 272 FKRVVEIFDEMLRSGVQPDRITFNSLLAVCSRGGLWEAARNLFSEMVHRGIDQDIFTYNTLLDAVCKGGQMDLAFEIMAEMPTKNILPNVVTYSTMIDGYAKAGRFDDALN 382 HSP 7 Score: 69.3218 bits (168), Expect = 4.327e-11 Identity = 30/86 (34.88%), Postives = 54/86 (62.79%), Query Frame = -1 Query: 106 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMD 363 ++ +Y+K G +EEA+D+ RE + G++ DVV Y+AL+ K G + +L DEM + + PN++TY+++ID + + + A D Sbjct: 472 VIDVYSKGGLYEEAMDVFREFKRVGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSATSECAFD 557
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy TrEMBL
Match: B9GSV1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s19470g PE=4 SV=2) HSP 1 Score: 218.779 bits (556), Expect = 5.864e-64 Identity = 106/121 (87.60%), Postives = 115/121 (95.04%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 LLSIYAKLGRFEEA+D+CREME+SG+R+DVVTYNALLGGYGKQ KYD VR +F+EMKA+ VSPNLLTYST+IDVYSKGGLY EAMDVFREFK AGLKADVVLYSALIDALCKNGLVESAVS Sbjct: 410 LLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALCKNGLVESAVS 530 HSP 2 Score: 88.1965 bits (217), Expect = 1.663e-17 Identity = 43/107 (40.19%), Postives = 71/107 (66.36%), Query Frame = -1 Query: 43 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALI 363 LL K G+ + A +I EM + +VVTY+ ++ GY K G+ D+ R LF+EMK +S + ++Y+T++ +Y+K G ++EAMDV RE + +G++ DVV Y+AL+ Sbjct: 340 LLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALL 446 HSP 3 Score: 87.0409 bits (214), Expect = 3.512e-17 Identity = 47/120 (39.17%), Postives = 71/120 (59.17%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 LL++ +K G +E A + EM + G+ +D+ TYN LL K G+ D + EM A+ + PN++TYSTMID Y+K G D+A ++F E K+ G+ D V Y+ L+ K G E A+ Sbjct: 305 LLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAM 424 HSP 4 Score: 81.2629 bits (199), Expect = 3.494e-15 Identity = 42/120 (35.00%), Postives = 74/120 (61.67%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQG-KYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 ++S Y + G EA+ I M+D G++ ++VTYNA++ GK G ++ V +FDEM + P+ +T+++++ V SKGGL++ A + E G+ D+ Y+ L+DA+CK G ++ A Sbjct: 234 IISAYGRSGYCNEAIKIFYSMKDYGLKPNLVTYNAVIDACGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMA 353 HSP 5 Score: 70.0922 bits (170), Expect = 2.803e-11 Identity = 37/109 (33.94%), Postives = 61/109 (55.96%), Query Frame = -1 Query: 7 FEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 333 F+ L+I EM +GM+ D +T+N+LL K G ++ R+L EM + + ++ TY+T++D KGG D A ++ E + +VV YS +ID K G ++ A Sbjct: 280 FKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDA 388 HSP 6 Score: 67.3958 bits (163), Expect = 2.015e-10 Identity = 29/86 (33.72%), Postives = 54/86 (62.79%), Query Frame = -1 Query: 106 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMD 363 L+ +Y+K G + EA+D+ RE + +G++ DVV Y+AL+ K G + +L DEM + + PN++TY+++ID + + + +D Sbjct: 480 LIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRPATTESVVD 565 HSP 7 Score: 66.6254 bits (161), Expect = 4.425e-10 Identity = 36/122 (29.51%), Postives = 66/122 (54.10%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGL-YDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 ++S +LG+ E A + + G V ++A++ YG+ G +E +F MK + PNL+TY+ +ID KGG+ + +++F E G++ D + +++L+ K GL E+A S Sbjct: 199 MISTLGRLGKVEMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMKDYGLKPNLVTYNAVIDACGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAARS 320
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy TrEMBL
Match: U5GLV2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s19470g PE=4 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 6.062e-64 Identity = 106/121 (87.60%), Postives = 115/121 (95.04%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 LLSIYAKLGRFEEA+D+CREME+SG+R+DVVTYNALLGGYGKQ KYD VR +F+EMKA+ VSPNLLTYST+IDVYSKGGLY EAMDVFREFK AGLKADVVLYSALIDALCKNGLVESAVS Sbjct: 410 LLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALCKNGLVESAVS 530 HSP 2 Score: 88.1965 bits (217), Expect = 1.661e-17 Identity = 43/107 (40.19%), Postives = 71/107 (66.36%), Query Frame = -1 Query: 43 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALI 363 LL K G+ + A +I EM + +VVTY+ ++ GY K G+ D+ R LF+EMK +S + ++Y+T++ +Y+K G ++EAMDV RE + +G++ DVV Y+AL+ Sbjct: 340 LLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALL 446 HSP 3 Score: 87.4261 bits (215), Expect = 3.217e-17 Identity = 47/120 (39.17%), Postives = 71/120 (59.17%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 LL++ +K G +E A + EM + G+ +D+ TYN LL K G+ D + EM A+ + PN++TYSTMID Y+K G D+A ++F E K+ G+ D V Y+ L+ K G E A+ Sbjct: 305 LLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAM 424 HSP 4 Score: 81.6481 bits (200), Expect = 3.199e-15 Identity = 42/120 (35.00%), Postives = 74/120 (61.67%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQG-KYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 ++S Y + G EA+ I M+D G++ ++VTYNA++ GK G ++ V +FDEM + P+ +T+++++ V SKGGL++ A + E G+ D+ Y+ L+DA+CK G ++ A Sbjct: 234 IISAYGRSGYCNEAIKIFYSMKDYGLKPNLVTYNAVIDACGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMA 353 HSP 5 Score: 70.0922 bits (170), Expect = 2.589e-11 Identity = 37/109 (33.94%), Postives = 61/109 (55.96%), Query Frame = -1 Query: 7 FEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 333 F+ L+I EM +GM+ D +T+N+LL K G ++ R+L EM + + ++ TY+T++D KGG D A ++ E + +VV YS +ID K G ++ A Sbjct: 280 FKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDA 388 HSP 6 Score: 67.3958 bits (163), Expect = 1.915e-10 Identity = 29/86 (33.72%), Postives = 54/86 (62.79%), Query Frame = -1 Query: 106 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMD 363 L+ +Y+K G + EA+D+ RE + +G++ DVV Y+AL+ K G + +L DEM + + PN++TY+++ID + + + +D Sbjct: 480 LIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRPATTESVVD 565 HSP 7 Score: 66.6254 bits (161), Expect = 3.828e-10 Identity = 36/122 (29.51%), Postives = 66/122 (54.10%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGL-YDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 ++S +LG+ E A + + G V ++A++ YG+ G +E +F MK + PNL+TY+ +ID KGG+ + +++F E G++ D + +++L+ K GL E+A S Sbjct: 199 MISTLGRLGKVEMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMKDYGLKPNLVTYNAVIDACGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAARS 320
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy TrEMBL
Match: B9I9H0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s11380g PE=4 SV=2) HSP 1 Score: 216.853 bits (551), Expect = 2.570e-63 Identity = 105/121 (86.78%), Postives = 114/121 (94.21%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 LLSIYAKLGRF+EALD+CREME+ G+R+DVVTYNALLGGYGKQ KYDEVR +F EMKA +VSPNLLTYST+IDVYSKGGLY EAMDVFREFK AGLKADVVLYSA+IDALCKNGLVESAVS Sbjct: 412 LLSIYAKLGRFQEALDVCREMENCGIRKDVVTYNALLGGYGKQCKYDEVRRVFGEMKAGRVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSAVIDALCKNGLVESAVS 532 HSP 2 Score: 85.8853 bits (211), Expect = 9.512e-17 Identity = 44/120 (36.67%), Postives = 72/120 (60.00%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 LL++ ++ G +E A + EM + G+ +D+ TYN LL K G+ D + EM A+ + PN++TYSTMID Y+K G +D+A+++F E K+ + D V Y+ L+ K G + A+ Sbjct: 307 LLAVCSRGGLWEAARSLSSEMLNRGIDQDIFTYNTLLDAVCKGGQMDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRFDDALNLFNEMKFLCISLDRVSYNTLLSIYAKLGRFQEAL 426 HSP 3 Score: 83.5741 bits (205), Expect = 6.504e-16 Identity = 41/107 (38.32%), Postives = 69/107 (64.49%), Query Frame = -1 Query: 43 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALI 363 LL K G+ + A +I EM + +VVTY+ ++ GY K G++D+ LF+EMK +S + ++Y+T++ +Y+K G + EA+DV RE + G++ DVV Y+AL+ Sbjct: 342 LLDAVCKGGQMDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRFDDALNLFNEMKFLCISLDRVSYNTLLSIYAKLGRFQEALDVCREMENCGIRKDVVTYNALL 448 HSP 4 Score: 80.1073 bits (196), Expect = 9.057e-15 Identity = 40/120 (33.33%), Postives = 74/120 (61.67%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQG-KYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 ++S Y + G +EA+ + M+ G++ ++VTYNA++ GK G ++ V +FDEM V P+ +T+++++ V S+GGL++ A + E G+ D+ Y+ L+DA+CK G ++ A Sbjct: 236 IISAYGRSGYCDEAIKVFDSMKHYGLKPNLVTYNAVIDACGKGGVEFKRVVEIFDEMLRNGVQPDRITFNSLLAVCSRGGLWEAARSLSSEMLNRGIDQDIFTYNTLLDAVCKGGQMDMA 355 HSP 5 Score: 68.1662 bits (165), Expect = 1.022e-10 Identity = 37/122 (30.33%), Postives = 66/122 (54.10%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGL-YDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 ++S +LG+ E A + G V ++A++ YG+ G DE +FD MK + PNL+TY+ +ID KGG+ + +++F E G++ D + +++L+ + GL E+A S Sbjct: 201 MISTLGRLGKVEIAKSVFEAALIEGYGNTVYAFSAIISAYGRSGYCDEAIKVFDSMKHYGLKPNLVTYNAVIDACGKGGVEFKRVVEIFDEMLRNGVQPDRITFNSLLAVCSRGGLWEAARS 322 HSP 6 Score: 67.781 bits (164), Expect = 1.619e-10 Identity = 28/86 (32.56%), Postives = 55/86 (63.95%), Query Frame = -1 Query: 106 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMD 363 L+ +Y+K G + EA+D+ RE + +G++ DVV Y+A++ K G + +L DEM + + PN++TY+++ID + + + + +D Sbjct: 482 LIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSAVIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRSAITESVVD 567 HSP 7 Score: 67.0106 bits (162), Expect = 2.685e-10 Identity = 34/111 (30.63%), Postives = 62/111 (55.86%), Query Frame = -1 Query: 1 FEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 333 F+ ++I EM +G++ D +T+N+LL + G ++ R+L EM + + ++ TY+T++D KGG D A ++ E + +VV YS +ID K G + A++ Sbjct: 282 FKRVVEIFDEMLRNGVQPDRITFNSLLAVCSRGGLWEAARSLSSEMLNRGIDQDIFTYNTLLDAVCKGGQMDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRFDDALN 392
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy Swiss-Prot
Match: PPR38_ARATH (Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 2.050e-18 Identity = 40/119 (33.61%), Postives = 68/119 (57.14%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 LL ++ K G+ +EA ++ +EM G+ +++TYN L+ GY Q + E + D M K SP+++T++++I Y D+ M VFR GL A+ V YS L+ C++G ++ A Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLA 422 HSP 2 Score: 78.5666 bits (192), Expect = 2.422e-16 Identity = 36/111 (32.43%), Postives = 71/111 (63.96%), Query Frame = -1 Query: 10 GRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALC-KNGLVES 339 G + A+ + +EME G++ VVTYN+L+ G K GK+++ L +M ++++ PN++T++ ++DV+ K G EA ++++E G+ +++ Y+ L+D C +N L E+ Sbjct: 242 GCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 352 HSP 3 Score: 76.6406 bits (187), Expect = 1.195e-15 Identity = 37/106 (34.91%), Postives = 63/106 (59.43%), Query Frame = -1 Query: 22 GRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 339 G+ EA+ + M ++G + DVVTYN+++ G + G L +M+ + V ++ TYST+ID + G D A+ +F+E + G+K+ VV Y++L+ LCK G Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAG 277 HSP 4 Score: 72.4034 bits (176), Expect = 3.477e-14 Identity = 33/119 (27.73%), Postives = 67/119 (56.30%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L+ Y + R ++ + + R + G+ + VTY+ L+ G+ + GK LF EM + V P+++TY ++D G ++A+++F + + + + +V+Y+ +I+ +CK G VE A Sbjct: 374 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDA 492 HSP 5 Score: 70.8626 bits (172), Expect = 1.201e-13 Identity = 32/97 (32.99%), Postives = 57/97 (58.76%), Query Frame = -1 Query: 1 GMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 291 G D T+N L+ G +GK E L D M P+++TY+++++ + G A+D+ R+ + +KADV YS +ID+LC++G +++A+S Sbjct: 153 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249 HSP 6 Score: 69.3218 bits (168), Expect = 4.212e-13 Identity = 34/115 (29.57%), Postives = 66/115 (57.39%), Query Frame = -1 Query: 7 YAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 351 + + G+ + A ++ +EM G+ DV+TY LL G GK ++ +F++++ K+ ++ Y+T+I+ KGG ++A ++F G+K +V+ Y+ +I LCK G + A Sbjct: 413 FCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEA 527 HSP 7 Score: 59.3066 bits (142), Expect = 1.024e-9 Identity = 33/106 (31.13%), Postives = 56/106 (52.83%), Query Frame = -1 Query: 22 GRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 339 G+ E+AL+I +++ S M +V Y ++ G K GK ++ LF + + V PN++TY+ MI K G EA + R+ + G + Y+ LI A ++G Sbjct: 452 GKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDG 557 HSP 8 Score: 52.7582 bits (125), Expect = 1.795e-7 Identity = 29/105 (27.62%), Postives = 51/105 (48.57%), Query Frame = -1 Query: 34 AKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDAL 348 K G+ E+A ++ + G++ +V+TY ++ G K+G E L +M+ +PN TY+T+I + + G + + E K G AD +ID L Sbjct: 484 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy Swiss-Prot
Match: PPR26_ARATH (Putative pentatricopeptide repeat-containing protein At1g09680 OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.829e-18 Identity = 41/114 (35.96%), Postives = 67/114 (58.77%), Query Frame = -1 Query: 22 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 363 L++ Y K+G +E + +ME S R DV TY+AL+ K+ K D LFDEM + + PN + ++T+I +S+ G D + +++ GL+ D+VLY+ L++ CKNG Sbjct: 281 LINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNG 394 HSP 2 Score: 70.4774 bits (171), Expect = 2.023e-13 Identity = 34/101 (33.66%), Postives = 60/101 (59.41%), Query Frame = -1 Query: 7 REMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 309 ++M G++ D+V YN L+ G+ K G R + D M + + P+ +TY+T+ID + +GG + A+++ +E G++ D V +SAL+ +CK G V A Sbjct: 369 QKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDA 469 HSP 3 Score: 67.0106 bits (162), Expect = 2.957e-12 Identity = 36/119 (30.25%), Postives = 65/119 (54.62%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L+ + + G E AL+I +EM+ +G+ D V ++AL+ G K+G+ + EM + P+ +TY+ M+D + K G + +E + G VV Y+ L++ LCK G +++A Sbjct: 421 LIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNA 539 HSP 4 Score: 66.2402 bits (160), Expect = 5.017e-12 Identity = 31/100 (31.00%), Postives = 59/100 (59.00%), Query Frame = -1 Query: 7 EMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 306 E+ D+G +V +N L+ + K+G + + +FDE+ + + P +++++T+I+ Y K G DE + + + + + DV YSALI+ALCK ++ A Sbjct: 230 EILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGA 329
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy Swiss-Prot
Match: PPR92_ARATH (Pentatricopeptide repeat-containing protein At1g62680, mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 2.986e-18 Identity = 39/114 (34.21%), Postives = 66/114 (57.89%), Query Frame = -1 Query: 7 AKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 348 K R +A D +E+E G+R +VVTY AL+ G ++ + L +M +K++PN++TYS ++D + K G EA ++F E + D+V YS+LI+ LC + ++ A Sbjct: 201 CKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEA 314 HSP 2 Score: 73.9442 bits (180), Expect = 9.883e-15 Identity = 36/121 (29.75%), Postives = 67/121 (55.37%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 L++ + K R E+ + + REM G+ + VTYN L+ G+ + G D+ + F +M +SP++ TY+ ++ G ++A+ +F + + + D+V Y+ +I +CK G VE A S Sbjct: 336 LINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWS 456 HSP 3 Score: 70.4774 bits (171), Expect = 1.546e-13 Identity = 35/117 (29.91%), Postives = 67/117 (57.26%), Query Frame = -1 Query: 13 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVE 363 L+ + + G ++A + +M+ G+ D+ TYN LLGG G+ ++ +F++M+ +++ +++TY+T+I K G +EA +F GLK D+V Y+ ++ LC GL+ Sbjct: 371 LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLH 487 HSP 4 Score: 68.1662 bits (165), Expect = 8.520e-13 Identity = 36/111 (32.43%), Postives = 61/111 (54.95%), Query Frame = -1 Query: 4 RFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 336 R +EA + M G DVV+YN L+ G+ K + ++ LF EM + + N +TY+T+I + + G D+A + F + + G+ D+ Y+ L+ LC NG +E A+ Sbjct: 310 RIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL 420 HSP 5 Score: 67.0106 bits (162), Expect = 2.289e-12 Identity = 38/109 (34.86%), Postives = 59/109 (54.13%), Query Frame = -1 Query: 13 GRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVE 339 R+ +A + +M + +V+TY+ALL + K GK E + LF+EM + P+++TYS++I+ DEA +F G ADVV Y+ LI+ CK VE Sbjct: 239 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVE 347 HSP 6 Score: 66.2402 bits (160), Expect = 4.842e-12 Identity = 36/119 (30.25%), Postives = 65/119 (54.62%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 LL + K G+ EA ++ EM + D+VTY++L+ G + DE +FD M ++ ++++Y+T+I+ + K ++ M +FRE GL ++ V Y+ LI + G V+ A Sbjct: 266 LLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 384 HSP 7 Score: 62.003 bits (149), Expect = 1.251e-10 Identity = 30/119 (25.21%), Postives = 64/119 (53.78%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L++ + + R +A+ + +M + G + D+V YNA++ K + ++ F E++ + + PN++TY+ +++ + +A + + + +V+ YSAL+DA KNG V A Sbjct: 161 LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEA 279 HSP 8 Score: 60.4622 bits (145), Expect = 3.846e-10 Identity = 30/101 (29.70%), Postives = 56/101 (55.45%), Query Frame = -1 Query: 22 ALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 324 AL I +M G D VT +L+ G+ ++ + + +L D+M P+++ Y+ +ID K ++A D F+E + G++ +VV Y+AL++ LC + Sbjct: 139 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS 239 HSP 9 Score: 56.225 bits (134), Expect = 1.106e-8 Identity = 35/118 (29.66%), Postives = 57/118 (48.31%), Query Frame = -1 Query: 10 GRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGL--------KADVVLYSALIDALCKNGLVES 339 G E+AL I +M+ M D+VTY ++ G K GK +E +LF + + + P+++TY+TM+ GL E ++ + K GL D+ L + LI + G S Sbjct: 414 GELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPS 531 HSP 10 Score: 52.373 bits (124), Expect = 1.840e-7 Identity = 29/119 (24.37%), Postives = 62/119 (52.10%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 LLS KL +++ + + ++ME G+R D+ T+N ++ + + ++ +M P+ +T ++++ + + +A+ + + G K D+V Y+A+ID+LCK V A Sbjct: 91 LLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDA 209
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy Swiss-Prot
Match: PPR37_ARATH (Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.096e-18 Identity = 39/119 (32.77%), Postives = 69/119 (57.98%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L+ + K G+ EA ++ +EM G+ D VTY +L+ G+ K+ + D+ + D M ++ PN+ T++ +I+ Y K L D+ +++FR+ G+ AD V Y+ LI C+ G +E A Sbjct: 323 LIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVA 441 HSP 2 Score: 76.2554 bits (186), Expect = 1.783e-15 Identity = 35/114 (30.70%), Postives = 64/114 (56.14%), Query Frame = -1 Query: 7 AKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 348 K G + A ++ EME G + D++ Y L+ G+ G++D+ L +M +K++P+++ +S +ID + K G EA ++ +E G+ D V Y++LID CK ++ A Sbjct: 258 CKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKA 371 HSP 3 Score: 72.0182 bits (175), Expect = 4.596e-14 Identity = 39/111 (35.14%), Postives = 60/111 (54.05%), Query Frame = -1 Query: 7 GRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 339 GR EAL++ M + G + ++T NAL+ G GK + L D M PN +TY ++ V K G AM++ R+ + +K D V YS +ID LCK+G +++A Sbjct: 156 GRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNA 266 HSP 4 Score: 72.0182 bits (175), Expect = 5.153e-14 Identity = 33/119 (27.73%), Postives = 71/119 (59.66%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L++ Y K ++ L++ R+M G+ D VTYN L+ G+ + GK + + LF EM +++V P++++Y ++D G ++A+++F + + + ++ D+ +Y+ +I +C V+ A Sbjct: 393 LINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA 511 HSP 5 Score: 67.0106 bits (162), Expect = 2.690e-12 Identity = 35/119 (29.41%), Postives = 64/119 (53.78%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 +L + K G+ A+++ R+ME+ ++ D V Y+ ++ G K G D LF+EM+ + +++ Y+T+I + G +D+ + R+ + DVV +SALID K G + A Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREA 336 HSP 6 Score: 62.3882 bits (150), Expect = 1.020e-10 Identity = 34/119 (28.57%), Postives = 63/119 (52.94%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L+ + +LG+ E A ++ +EM +R D+V+Y LL G G+ ++ +F++++ K+ ++ Y+ +I D+A D+F G+K DV Y+ +I LCK G + A Sbjct: 428 LIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEA 546 HSP 7 Score: 59.6918 bits (143), Expect = 7.343e-10 Identity = 32/106 (30.19%), Postives = 56/106 (52.83%), Query Frame = -1 Query: 22 GRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 339 G+ +A+ + M ++G + + VTY +L K G+ L +M+ +K+ + + YS +ID K G D A ++F E + G KAD+++Y+ LI C G Sbjct: 191 GKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAG 296 HSP 8 Score: 52.7582 bits (125), Expect = 1.649e-7 Identity = 30/120 (25.00%), Postives = 61/120 (50.83%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 L S+ A+ +++ LD+C++ME G+ ++ T + ++ + K + ++ P+ +T+ST+I+ G EA+++ G K ++ +AL++ LC NG V AV Sbjct: 78 LFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAV 197 HSP 9 Score: 52.373 bits (124), Expect = 1.889e-7 Identity = 33/101 (32.67%), Postives = 51/101 (50.50%), Query Frame = -1 Query: 37 GRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDA 339 G E+AL+I ++E S M D+ YN ++ G K D+ LF + + V P++ TY+ MI K G EA +FR+ + G + Y+ LI A Sbjct: 471 GEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRA 571 HSP 10 Score: 51.6026 bits (122), Expect = 3.860e-7 Identity = 29/101 (28.71%), Postives = 49/101 (48.51%), Query Frame = -1 Query: 34 RFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDAL 336 + ++A D+ + G++ DV TYN ++GG K+G E LF +M+ SPN TY+ +I + G ++ + E K G D ++D L Sbjct: 507 KVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML 607
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy Swiss-Prot
Match: PP407_ARATH (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.451e-18 Identity = 40/108 (37.04%), Postives = 67/108 (62.04%), Query Frame = -1 Query: 28 YAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCK 351 +++ G EA + REM D+G VVTYNAL+ G+ GK ++ A+ ++MK + +SP++++YST++ + + DEA+ V RE G+K D + YS+LI C+ Sbjct: 390 FSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCE 497 HSP 2 Score: 82.4185 bits (202), Expect = 1.814e-17 Identity = 42/121 (34.71%), Postives = 65/121 (53.72%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 L+ Y K G F +AL + EM G+ V+TY +L+ K G + D+M+ + + PN TY+T++D +S+ G +EA V RE G VV Y+ALI+ C G +E A++ Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIA 436 HSP 3 Score: 72.0182 bits (175), Expect = 6.966e-14 Identity = 37/120 (30.83%), Postives = 68/120 (56.67%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 L++ + G+ E+A+ + +M++ G+ DVV+Y+ +L G+ + DE + EM + + P+ +TYS++I + + EA D++ E GL D Y+ALI+A C G +E A+ Sbjct: 421 LINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKAL 540 HSP 4 Score: 71.2478 bits (173), Expect = 1.140e-13 Identity = 34/101 (33.66%), Postives = 59/101 (58.42%), Query Frame = -1 Query: 22 ALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 324 A ++ +EM +S + +V TYN L+ G+ G D LFD+M+ + PN++TY+T+ID Y K D+ + R GL+ +++ Y+ +I+ LC+ G Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREG 289 HSP 5 Score: 70.0922 bits (170), Expect = 2.823e-13 Identity = 34/116 (29.31%), Postives = 65/116 (56.03%), Query Frame = -1 Query: 4 YAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 351 Y KL + ++ + R M G+ ++++YN ++ G ++G+ EV + EM + S + +TY+T+I Y K G + +A+ + E GL V+ Y++LI ++CK G + A+ Sbjct: 250 YCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAM 365 HSP 6 Score: 69.3218 bits (168), Expect = 5.363e-13 Identity = 38/119 (31.93%), Postives = 66/119 (55.46%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 +LS + + +EAL + REM + G++ D +TY++L+ G+ +Q + E L++EM + P+ TY+ +I+ Y G ++A+ + E G+ DVV YS LI+ L K A Sbjct: 456 VLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREA 574 HSP 7 Score: 62.7734 bits (151), Expect = 7.421e-11 Identity = 38/112 (33.93%), Postives = 54/112 (48.21%), Query Frame = -1 Query: 4 GRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 339 G + AL + +ME G +VVTYN L+ GY K K D+ L M + + PNL++Y+ +I+ + G E V E G D V Y+ LI CK G A+ Sbjct: 219 GNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQAL 330 HSP 8 Score: 61.6178 bits (148), Expect = 2.201e-10 Identity = 33/120 (27.50%), Postives = 62/120 (51.67%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 L+ K G A++ +M G+ + TY L+ G+ ++G +E + EM SP+++TY+ +I+ + G ++A+ V + K GL DVV YS ++ C++ V+ A+ Sbjct: 351 LIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEAL 470 HSP 9 Score: 56.225 bits (134), Expect = 1.133e-8 Identity = 40/134 (29.85%), Postives = 63/134 (47.01%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYS-----------KG----GLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L++ Y G E+AL + EM + G+ DVVTY+ L+ G KQ + E + L ++ ++ P+ +TY T+I+ S KG G+ EA VF K D Y+ +I C+ G + A Sbjct: 526 LINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKA 659 HSP 10 Score: 50.8322 bits (120), Expect = 7.034e-7 Identity = 36/121 (29.75%), Postives = 59/121 (48.76%), Query Frame = -1 Query: 1 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 363 L+ + + R +EA D+ EM G+ D TY AL+ Y +G ++ L +EM + V P+++TYS +I+ +K EA + + + V Y LI+ C N +S VS Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN-CSNIEFKSVVS 610
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy Swiss-Prot
Match: PPR36_ARATH (Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 3.529e-18 Identity = 38/113 (33.63%), Postives = 68/113 (60.18%), Query Frame = -1 Query: 7 KLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 345 K G + A ++ EME G+ +++TYN L+GG+ G++D+ L +M +K++PN++T+S +ID + K G EA ++ +E G+ D + Y++LID CK ++ A Sbjct: 275 KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKA 387 HSP 2 Score: 80.1073 bits (196), Expect = 9.535e-17 Identity = 37/119 (31.09%), Postives = 72/119 (60.50%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L++ Y K R ++ L++ R+M G+ D VTYN L+ G+ + GK + + LF EM ++KV PN++TY ++D G ++A+++F + + + ++ D+ +Y+ +I +C V+ A Sbjct: 409 LINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA 527 HSP 3 Score: 75.8702 bits (185), Expect = 2.957e-15 Identity = 36/119 (30.25%), Postives = 66/119 (55.46%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L+ + K G+ EA ++ +EM G+ D +TY +L+ G+ K+ D+ + D M ++ PN+ T++ +I+ Y K D+ +++FR+ G+ AD V Y+ LI C+ G + A Sbjct: 339 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVA 457 HSP 4 Score: 75.0998 bits (183), Expect = 4.679e-15 Identity = 40/111 (36.04%), Postives = 62/111 (55.86%), Query Frame = -1 Query: 7 GRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 339 GR EAL++ M + G + D++T N L+ G GK E L D+M PN +TY +++V K G AM++ R+ + +K D V YS +ID LCK+G +++A Sbjct: 172 GRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNA 282 HSP 5 Score: 71.2478 bits (173), Expect = 9.074e-14 Identity = 34/119 (28.57%), Postives = 67/119 (56.30%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 +L++ K G+ A+++ R+ME+ ++ D V Y+ ++ G K G D LF+EM+ + ++ N++TY+ +I + G +D+ + R+ + +VV +S LID+ K G + A Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREA 352 HSP 6 Score: 53.9138 bits (128), Expect = 6.545e-8 Identity = 31/119 (26.05%), Postives = 60/119 (50.42%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L+ + +LG+ A ++ +EM + ++VTY LL G G+ ++ +F++++ K+ ++ Y+ +I D+A D+F G+K V Y+ +I LCK G + A Sbjct: 444 LIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEA 562 HSP 7 Score: 52.373 bits (124), Expect = 1.910e-7 Identity = 36/112 (32.14%), Postives = 54/112 (48.21%), Query Frame = -1 Query: 4 GRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 339 G E+AL+I ++E S M D+ YN ++ G K D+ LF + + V P + TY+ MI K G EA +FR+ + G D Y+ LI A +G +V Sbjct: 487 GESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSV 598
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy Swiss-Prot
Match: PPR12_ARATH (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 4.655e-18 Identity = 43/119 (36.13%), Postives = 68/119 (57.14%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L++ Y K G ++A + M +G +VVTY L+ G K+G D L EM + PN+ TY+++++ K G +EA+ + EF+ AGL AD V Y+ L+DA CK+G ++ A Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545 HSP 2 Score: 76.6406 bits (187), Expect = 1.770e-15 Identity = 39/120 (32.50%), Postives = 67/120 (55.83%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 ++S + ++G EA + EM G+ D VT+ L+ GY K G + + + M SPN++TY+T+ID K G D A ++ E GL+ ++ Y+++++ LCK+G +E AV Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511 HSP 3 Score: 72.0182 bits (175), Expect = 5.467e-14 Identity = 33/112 (29.46%), Postives = 65/112 (58.04%), Query Frame = -1 Query: 13 AKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVE 348 K G + A ++ EM G++ ++ TYN+++ G K G +E L E +A ++ + +TY+T++D Y K G D+A ++ +E GL+ +V ++ L++ C +G++E Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 578 HSP 4 Score: 72.0182 bits (175), Expect = 6.422e-14 Identity = 40/119 (33.61%), Postives = 61/119 (51.26%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L+ + K G A EM + DV+TY A++ G+ + G E LF EM + + P+ +T++ +I+ Y K G +A V AG +VV Y+ LID LCK G ++SA Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475 HSP 5 Score: 70.8626 bits (172), Expect = 1.422e-13 Identity = 38/119 (31.93%), Postives = 64/119 (53.78%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 ++ +LGR +EA + ME G DV++Y+ ++ GY + G+ D+V L + MK + + PN Y ++I + + EA + F E G+ D V+Y+ LID CK G + +A Sbjct: 252 VIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370 HSP 6 Score: 67.3958 bits (163), Expect = 2.362e-12 Identity = 40/119 (33.61%), Postives = 61/119 (51.26%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 LL KL EEA EM G+ D V Y L+ G+ K+G F EM ++ ++P++LTY+ +I + + G EA +F E GL+ D V ++ LI+ CK G ++ A Sbjct: 325 LLCRICKLAEAEEAFS---EMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDA 440 HSP 7 Score: 57.3806 bits (137), Expect = 5.845e-9 Identity = 26/116 (22.41%), Postives = 59/116 (50.86%), Query Frame = -1 Query: 1 AKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAVS 348 K G EEA+ + E E +G+ D VTY L+ Y K G+ D+ + + EM + + P ++T++ +++ + G+ ++ + G+ + +++L+ C +++A + Sbjct: 502 CKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATA 617 HSP 8 Score: 56.9954 bits (136), Expect = 6.290e-9 Identity = 29/112 (25.89%), Postives = 57/112 (50.89%), Query Frame = -1 Query: 28 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCK 363 L+ Y K G ++A +I +EM G++ +VT+N L+ G+ G ++ L + M A+ ++PN T+++++ Y A ++++ G+ D Y L+ CK Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCK 643 HSP 9 Score: 55.4546 bits (132), Expect = 2.302e-8 Identity = 31/116 (26.72%), Postives = 56/116 (48.28%), Query Frame = -1 Query: 7 YAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG-LVESA 351 Y + G ++ + M+ G++ + Y +++G + K E F EM Q + P+ + Y+T+ID + K G A F E + DV+ Y+A+I C+ G +VE+ Sbjct: 291 YCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406 HSP 10 Score: 51.2174 bits (121), Expect = 5.264e-7 Identity = 26/99 (26.26%), Postives = 54/99 (54.55%), Query Frame = -1 Query: 28 ALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCK 324 A+ + RE + G+ +V +YN ++ + G+ E L M+ + +P++++YST+++ Y + G D+ + K GLK + +Y ++I LC+ Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCR 328
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy Swiss-Prot
Match: PPR93_ARATH (Pentatricopeptide repeat-containing protein At1g62720 OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 5.775e-18 Identity = 39/114 (34.21%), Postives = 68/114 (59.65%), Query Frame = -1 Query: 7 AKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 348 K+G +A+++ ME G+R D VTYN+L+ G G++ + L +M + + PN++T++ +IDV+ K G + EAM ++ E + DV Y++LI+ LC +G V+ A Sbjct: 185 CKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEA 298 HSP 2 Score: 76.6406 bits (187), Expect = 8.614e-16 Identity = 37/119 (31.09%), Postives = 65/119 (54.62%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 ++ ++ K G+F EA+ + EM + DV TYN+L+ G G+ DE + + D M + P+++TY+T+I+ + K DE +FRE GL D + Y+ +I + G ++A Sbjct: 250 VIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAA 368 HSP 3 Score: 65.4698 bits (158), Expect = 6.875e-12 Identity = 34/109 (31.19%), Postives = 61/109 (55.96%), Query Frame = -1 Query: 13 GRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVE 339 GR+ +A + R+M + +V+T+ A++ + K+GK+ E L++EM + V P++ TY+++I+ G DEA + G DVV Y+ LI+ CK+ V+ Sbjct: 223 GRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVD 331 HSP 4 Score: 64.6994 bits (156), Expect = 1.325e-11 Identity = 34/119 (28.57%), Postives = 64/119 (53.78%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L++ + K R +E + REM G+ D +TYN ++ GY + G+ D + +F M ++ PN+ TYS ++ ++A+ +F + + ++ D+ Y+ +I +CK G VE A Sbjct: 320 LINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDA 435 HSP 5 Score: 63.929 bits (154), Expect = 2.341e-11 Identity = 39/112 (34.82%), Postives = 58/112 (51.79%), Query Frame = -1 Query: 4 GRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 339 GR +EA + M G DVVTYN L+ G+ K + DE LF EM + + + +TY+T+I Y + G D A ++F + ++ YS L+ LC N VE A+ Sbjct: 293 GRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMD---SRPNIRTYSILLYGLCMNWRVEKAL 401 HSP 6 Score: 63.1586 bits (152), Expect = 4.501e-11 Identity = 33/114 (28.95%), Postives = 65/114 (57.02%), Query Frame = -1 Query: 22 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 363 +++ + RF AL + +M G DVVT ++L+ G+ + + + L +M+ P+++ Y+T+ID K GL ++A+++F + G++AD V Y++L+ LC +G Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSG 223 HSP 7 Score: 59.6918 bits (143), Expect = 6.351e-10 Identity = 32/120 (26.67%), Postives = 65/120 (54.17%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 +LS AK ++ + + ME G+ D+ +YN ++ + ++ ++ +M P+++T S++I+ + +G +A+D+ + + G + DVV+Y+ +ID CK GLV AV Sbjct: 75 VLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAV 194
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy Swiss-Prot
Match: PP421_ARATH (Pentatricopeptide repeat-containing protein At5g46680 OS=Arabidopsis thaliana GN=At5g46680 PE=2 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 9.429e-18 Identity = 43/121 (35.54%), Postives = 69/121 (57.02%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFRE-FKWAGLKADVVLYSALIDALCKNGLVESAV 363 L+ Y + +EA + R M ++G+ DV TYN+L+ G K + V LFDEM +SP++ +Y+T++ Y K G + EA + E AGL + Y+ L+DALCK+G ++A+ Sbjct: 54 LIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAI 174 HSP 2 Score: 60.4622 bits (145), Expect = 3.391e-10 Identity = 40/121 (33.06%), Postives = 63/121 (52.07%), Query Frame = -1 Query: 4 LLSIYAKLGRFEEALDICREMEDSGMR-RDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESAV 363 ++S K GR EEA + E+ SG R +D+V+YN LL Y K G D V L +E++ + + P+ T++ +++ G A G++ VV + LID LCK G V+ A+ Sbjct: 264 VVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAM 384 HSP 3 Score: 56.6102 bits (135), Expect = 6.774e-9 Identity = 34/119 (28.57%), Postives = 62/119 (52.10%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 LL K G + A+++ + ++ S ++ +++TYN L+ G K + V + E+K +PN +TY+TM+ +Y K ++ + +F + K G D A++ AL K G E A Sbjct: 160 LLDALCKSGHTDNAIELFKHLK-SRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEA 277
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy Swiss-Prot
Match: PP171_ARATH (Pentatricopeptide repeat-containing protein At2g26790, mitochondrial OS=Arabidopsis thaliana GN=At2g26790 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 9.464e-18 Identity = 39/106 (36.79%), Postives = 64/106 (60.38%), Query Frame = -1 Query: 31 AKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALC 348 +KLGR EEA ++ +EM+D G+ DV+ Y L+ GY QGK + L DEM +SP+L+TY+ ++ ++ G +E ++++ K G K + V S +I+ LC Sbjct: 399 SKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLC 504 HSP 2 Score: 67.781 bits (164), Expect = 2.025e-12 Identity = 36/114 (31.58%), Postives = 59/114 (51.75%), Query Frame = -1 Query: 22 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNG 363 +L Y K+ EAL+ +E D + D V YN K G+ +E L EMK + + P+++ Y+T+ID Y G +A+D+ E G+ D++ Y+ L+ L +NG Sbjct: 359 ILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNG 472 HSP 3 Score: 64.6994 bits (156), Expect = 1.988e-11 Identity = 38/132 (28.79%), Postives = 65/132 (49.24%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDE-------------AMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 ++ + KL EA + M + G+ D+ TY ++ Y + + + +LF++MK + + P+++TY+ ++D Y K A +V REF AG+ DVV Y+ LID CK +E A Sbjct: 597 MIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQA 728 HSP 4 Score: 58.151 bits (139), Expect = 3.385e-9 Identity = 34/113 (30.09%), Postives = 55/113 (48.67%), Query Frame = -1 Query: 40 SIYAKL-------GRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALID 357 S+Y KL G E+A D+ ++M + ++G + K E + LFD M + + P+L TY+ MI Y + +A +F + K G+K DVV Y+ L+D Sbjct: 557 SVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLD 669 HSP 5 Score: 57.3806 bits (137), Expect = 6.029e-9 Identity = 35/119 (29.41%), Postives = 59/119 (49.58%), Query Frame = -1 Query: 7 LLSIYAKLGRFEEALDICREMEDSGMRRDVVTYNALLGGYGKQGKYDEVRALFDEMKAQKVSPNLLTYSTMIDVYSKGGLYDEAMDVFREFKWAGLKADVVLYSALIDALCKNGLVESA 363 L+ Y G+ +ALD+ EM +GM D++TYN L+ G + G +EV +++ MKA+ PN +T S +I+ EA D F + + ++ + C+ GL + A Sbjct: 429 LIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENK----ASFVKGYCEAGLSKKA 543 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0010846 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0010846 ID=g.arboreum_cottongen_reftransV1_0010846; Name=g.arboreum_cottongen_reftransV1_0010846; organism=Gossypium arboreum; type=contig; length=363bpback to top |