g.arboreum_cottongen_reftransV1_0011968, g.arboreum_cottongen_reftransV1_0011968 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0011968
Unique Nameg.arboreum_cottongen_reftransV1_0011968
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length1141
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr10chromosomeg.arboreum_cottongen_reftransV1_0011968:1..1141 .
Chr10:17965416..17967588 +
Homology
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy TrEMBL
Match: A0A0D2RJW7_GOSRA (Carbonic anhydrase OS=Gossypium raimondii GN=B456_005G225400 PE=3 SV=1)

HSP 1 Score: 338.576 bits (867), Expect = 6.537e-111
Identity = 159/230 (69.13%), Postives = 190/230 (82.61%), Query Frame = 3
Query:  399 GLQEVTGSKLNLFDELKLRFLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGPSETNAALEFAVKTLQVENILIIGHSCCGGIQTLMSMQDNSD-SSFIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDFLNCTFEKWTLDFKGGSDEEKGRFFVKDQQLWC 1085
            G+ E+  S  +LFD+LK  FLSFK HKY+E LE ++ L + Q PKFMVIACADSRVCPSTILGF PGEAFM+RNVAN+VP  + GPSETNAALEFAV +L+VEN+ IIGHSCCGGI+ LMSMQD ++ SSFI++WV  GKNAKL+T++A+++LSFDQQC  CEKESIN SL+NLLTYPWI+EKVKK ML +HGGYYDF+NCTFEKWTLD+KG     K R  VKD+  WC
Sbjct:   70 GIMEME-SGCDLFDKLKNGFLSFKSHKYMENLECYQALAKGQAPKFMVIACADSRVCPSTILGFEPGEAFMVRNVANMVPTYESGPSETNAALEFAVNSLEVENVFIIGHSCCGGIRALMSMQDKAESSSFIRSWVIVGKNAKLSTKAASSNLSFDQQCTHCEKESINNSLLNLLTYPWIEEKVKKGMLSLHGGYYDFVNCTFEKWTLDYKGSIMNGKNRVVVKDRLFWC 298          
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy TrEMBL
Match: A0A067H0S5_CITSI (Carbonic anhydrase OS=Citrus sinensis GN=CISIN_1g020134mg PE=3 SV=1)

HSP 1 Score: 336.65 bits (862), Expect = 1.960e-110
Identity = 168/279 (60.22%), Postives = 202/279 (72.40%), Query Frame = 3
Query:  297 MRLNDVDDIQSRSSSSPDITRRP--SVSASSNSLGVGLQE-------VTGSK----LNLFDELKLRFLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGPSETNAALEFAVKTLQVENILIIGHSCCGGIQTLMSMQDNSDS--SFIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDFLNCTFEKWTLDFKGG--SDEEKGRFFVKDQQLW 1082
            M+L  + D Q     +P + RR    +  SS+S    L           G+K    L+ F+E+K RFLSFK +KY EELEHF+ L +AQ+PKFMVIACADSRVCPS ILG +PGE FMIRNVANLVPPL+ GPSETNAALEFAV TL+V+NIL+IGHS CGGIQ LM MQD+ DS  S  + WV N K AK  T++   HLSFDQQCR CEKESI+ S++NLLTYPWI+E+V+KE+LF+HGGYYD LNCTFEKWTLD+KG    +EE GR  +KD   W
Sbjct:    1 MKLEKIRDAQQ--GFTPVLKRRSFSKLETSSSSTAAALTRDRTSYKVQDGAKSCGGLDYFEEMKQRFLSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSRVCPSYILGLQPGETFMIRNVANLVPPLENGPSETNAALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDDVDSRQSLTENWVVNAKVAKFRTKAYTAHLSFDQQCRHCEKESISRSILNLLTYPWIEERVRKELLFIHGGYYDLLNCTFEKWTLDYKGRKVDEEEVGRHSIKDHSFW 277          
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy TrEMBL
Match: D7TU30_VITVI (Carbonic anhydrase OS=Vitis vinifera GN=VIT_03s0017g00270 PE=3 SV=1)

HSP 1 Score: 335.495 bits (859), Expect = 1.321e-109
Identity = 163/249 (65.46%), Postives = 193/249 (77.51%), Query Frame = 3
Query:  369 VSASSNSLGVGLQEVTGSKL----------NLFDELKLRFLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGPSETNAALEFAVKTLQVENILIIGHSCCGGIQTLMSMQDNSD-SSFIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDFLNCTFEKWTLDFKGGSDEEKGRFFVKDQQLW 1082
            + AS  S G+  QE+T  +L          ++FDE+K RFLSFK HKYLE LE F+ L  AQ PKFMVIACADSRVCPS ILGF PGEAFM+RNVANLVP  + GP+ETNAALEFAV TL+VENIL+IGHSCCGGI+ LM M++  D SSFI++WV  GKNAKL  ++ A+ LSFDQQCR CEKESIN SL+NLLTYPWIKE+V++ ML +HGGYYDF+NCTFEKWTLD+K     E GR+ VKD+  W
Sbjct:   58 LKASRESPGL-TQELTSDRLESIAEIENRYDVFDEVKHRFLSFKKHKYLENLECFQNLATAQAPKFMVIACADSRVCPSKILGFEPGEAFMVRNVANLVPLYENGPTETNAALEFAVNTLEVENILVIGHSCCGGIRALMGMEEEVDSSSFIQSWVVVGKNAKLRAKATASKLSFDQQCRNCEKESINCSLLNLLTYPWIKERVERGMLSIHGGYYDFVNCTFEKWTLDYK-----ESGRYLVKDRVFW 300          
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy TrEMBL
Match: C6TIM7_SOYBN (Carbonic anhydrase OS=Glycine max PE=2 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 1.348e-109
Identity = 171/324 (52.78%), Postives = 216/324 (66.67%), Query Frame = 3
Query:  135 MAWLIRFKARSLVSATRSLRDTLDSYRCSLSHFSGFTTDDSVRSFPR--KWL----CSKAMRLNDVDDIQSRSSSSPDITRRPSVSASSNSLGVGLQEVTGSKLNLFDELKLRFLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGPSETNAALEFAVKTLQVENILIIGHSCCGGIQTLMSMQDNSDS-SFIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDFLNCTFEKWTLDFKGGSDEEKGRFFVKDQQLWC 1085
            M W IR +  SL+ +   L  +     C    FS  T+    R +P+   W+    C  A  L  + + Q    S+     R  +      L  G      S  NLF  +K  FLSFK  KY++ELEHFE L EAQ PKFMVIACADSRVCPS ILGF+PGE FMIRN+ANLVP ++ GPSE NAAL+FAV TLQVENIL+IGHS C GI+ LM+MQ++++S +FI  WV NGK AK  T++A  HLSFDQQC+ CEKESIN SL+NLL+YPWI+++V+KE+L +HGGYY+F NC+FEKWTLDFK  + EE   + VK+Q+ WC
Sbjct:    1 MVWPIRSRISSLLCSKAPLVGSYIYDSCGCLRFSAPTSSSITRHWPKIMDWVQMDRCRAAASLPSIKEKQPEGHSN-----RVRLGQEIKGLDEGNMAEIDSYQNLFGLMKQGFLSFKSQKYIKELEHFEALAEAQFPKFMVIACADSRVCPSNILGFQPGEVFMIRNIANLVPVMKNGPSECNAALQFAVTTLQVENILVIGHSSCAGIEALMNMQEDAESRNFIHKWVANGKLAKQRTKAATAHLSFDQQCKFCEKESINQSLLNLLSYPWIQDRVRKELLSLHGGYYNFSNCSFEKWTLDFKQCNVEEGSSYVVKEQEFWC 319          
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy TrEMBL
Match: F6H124_VITVI (Carbonic anhydrase OS=Vitis vinifera GN=VIT_18s0001g07400 PE=3 SV=1)

HSP 1 Score: 332.798 bits (852), Expect = 1.773e-108
Identity = 164/271 (60.52%), Postives = 203/271 (74.91%), Query Frame = 3
Query:  324 QSRSSSSPDITRR--PSVSASSNSLGVGLQ-------------EVTGSKLNLFDELKLRFLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGPSETNAALEFAVKTLQVENILIIGHSCCGGIQTLMSMQDN-SDSSFIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDFLNCTFEKWTLDFKGGSDEEKG-RFFVKDQQLWC 1085
            ++   S P + R     + ASS+SLG G               + T   L+ F+ELK RFL FK  KYLEE EHF+ L +AQ+PKFMVIACADSRVCPS ILGF+PGEAFMIRNVANLVPP++ GPSETNAALEFAV TL+VENIL+IGHS C GI+TL+ M+D+ + SSF++ WV NGK AKL T++AA HL F QQC+ CEKESIN SL+NLLTYPWI+++ +K +L +HGGYYDFLNCTFEKWT+DFK  S E++G +  VK++  WC
Sbjct:   43 ETHLGSLPSVKRNLVSRLEASSDSLGCGQHLMSNKMGNEMESLDKTDQGLDFFEELKHRFLCFKKQKYLEEPEHFQALAKAQSPKFMVIACADSRVCPSNILGFQPGEAFMIRNVANLVPPVENGPSETNAALEFAVNTLEVENILVIGHSSCAGIETLVRMRDDVNSSSFVENWVANGKVAKLRTKAAAGHLGFYQQCKYCEKESINHSLLNLLTYPWIEDRERKGLLSIHGGYYDFLNCTFEKWTIDFKRSSIEKEGPKCLVKNRAFWC 313          
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy Swiss-Prot
Match: BCA5_ARATH (Beta carbonic anhydrase 5, chloroplastic OS=Arabidopsis thaliana GN=BCA5 PE=2 SV=1)

HSP 1 Score: 295.819 bits (756), Expect = 3.442e-96
Identity = 135/245 (55.10%), Postives = 181/245 (73.88%), Query Frame = 3
Query:  357 RRPSVSASSNSLGVGLQEVTGSKLNLFDELKLRFLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGPSETNAALEFAVKTLQVENILIIGHSCCGGIQTLMSMQDNSDS-SFIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDFLNCTFEKWTLDFKG--GSDEEKGRFFVKDQQLW 1082
            + P ++  +N + +  Q  T    ++FD++K RFL+FK  KY+++ EH++ L +AQ PKF+VIACADSRVCPS +LGF+PG+AF +RN+ANLVPP + GP+ET AALEF+V TL VENIL+IGHS CGGIQ LM M+D  DS SFI  WV  GK AK +T++ A++L FD QC+ CEK SIN SL  LL YPWI+EKV++  L +HGGYY+F++CTFEKWT+D+    G  +E     VKD+ +W
Sbjct:   60 KTPGLTQEANGVAIDRQNNT----DVFDDMKQRFLAFKKLKYMDDFEHYKNLADAQAPKFLVIACADSRVCPSAVLGFQPGDAFTVRNIANLVPPYESGPTETKAALEFSVNTLNVENILVIGHSRCGGIQALMKMEDEGDSRSFIHNWVVVGKKAKESTKAVASNLHFDHQCQHCEKASINHSLERLLGYPWIEEKVRQGSLSLHGGYYNFVDCTFEKWTVDYAASRGKKKEGSGIAVKDRSVW 300          
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy Swiss-Prot
Match: BCA6_ARATH (Beta carbonic anhydrase 6, mitochondrial OS=Arabidopsis thaliana GN=BCA6 PE=2 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 9.917e-89
Identity = 129/229 (56.33%), Postives = 169/229 (73.80%), Query Frame = 3
Query:  402 LQEVTGSKLNLFDELKLRFLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGPSETNAALEFAVKTLQVENILIIGHSCCGGIQTLMSMQDN--SDSSFIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDFLNCTFEKWTLDFKGGSDEEKGRFFVKDQQLW 1082
            L   T +  +  DE++ RFL FK  KYL E+E F+ L  AQ+PK MVI CADSRVCPS +LGF+PGEAF IRNVANLV P+Q GP+ETN+ALEFAV TLQVENI+++GHS CGGI  LMS Q++    SS ++ WV NGK AKL T+ A++HLSFD+QCR CEKESI  S+MNL+TY WI+++VK+  + +HG YY+  +C+ EKW L     SD+    F++ D+++W
Sbjct:   65 LNRETETSYDFLDEMRHRFLKFKRQKYLPEIEKFKALAIAQSPKVMVIGCADSRVCPSYVLGFQPGEAFTIRNVANLVTPVQNGPTETNSALEFAVTTLQVENIIVMGHSNCGGIAALMSHQNHQGQHSSLVERWVMNGKAAKLRTQLASSHLSFDEQCRNCEKESIKDSVMNLITYSWIRDRVKRGEVKIHGCYYNLSDCSLEKWRLS----SDKTNYGFYISDREIW 289          
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy Swiss-Prot
Match: BCA4_ARATH (Beta carbonic anhydrase 4 OS=Arabidopsis thaliana GN=BCA4 PE=1 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 5.290e-69
Identity = 109/224 (48.66%), Postives = 152/224 (67.86%), Query Frame = 3
Query:  369 VSASSNSLGVGLQEVTGSKLNLFDELKLRFLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPL-QKGPSETNAALEFAVKTLQVENILIIGHSCCGGIQTLMSMQDNS---DSSFIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDFLNCTFEKWTLDFK 1028
             +A   +L   L+E+  S  +  + +K  F  FK  KYL+    F  L + QTPKF+V AC+DSRVCPS IL F+PGEAF++RN+AN+VPP  QK  S   AA+E+AV  L+VENIL+IGHSCCGGI+ LMS++D++    S FI+ WV  G +A+   +     LS+D QC  CEKE++N+SL NLL+YP+++ +V K  L + GG+Y+F+  TF+ W LDFK
Sbjct:   49 AAAKIKALTAELKELDSSNSDAIERIKTGFTQFKTEKYLKNSTLFNHLAKTQTPKFLVFACSDSRVCPSHILNFQPGEAFVVRNIANMVPPFDQKRHSGVGAAVEYAVVHLKVENILVIGHSCCGGIKGLMSIEDDAAPTQSDFIENWVKIGASARNKIKEEHKDLSYDDQCNKCEKEAVNVSLGNLLSYPFVRAEVVKNTLAIRGGHYNFVKGTFDLWELDFK 272          
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy Swiss-Prot
Match: BCA3_ARATH (Beta carbonic anhydrase 3 OS=Arabidopsis thaliana GN=BCA3 PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 3.513e-64
Identity = 102/213 (47.89%), Postives = 145/213 (68.08%), Query Frame = 3
Query:  402 LQEVTGSKLNLFDELKLRFLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGP-SETNAALEFAVKTLQVENILIIGHSCCGGIQTLMSMQDN---SDSSFIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDFLNCTFEKWTLDFK 1028
            L+E+  +KL+  + +K  FL FK + Y +    + +L ++QTPKF+V ACADSRV PS IL F+ GEAF++RN+AN+VPP  K   S   AALE+ +  L VENIL+IGHSCCGGI+ LM+++DN   + + FI+ W+     AK   +     LSF+ QC  CEKE++N+SL NLL+YP+++E+V K  L + G +YDF+  TF+ W LDFK
Sbjct:   38 LEELDSNKLDAVERIKSGFLHFKTNNYEKNPTLYNSLAKSQTPKFLVFACADSRVSPSHILNFQLGEAFIVRNIANMVPPYDKTKHSNVGAALEYPITVLNVENILVIGHSCCGGIKGLMAIEDNTAPTKTEFIENWIQICAPAKNRIKQDCKDLSFEDQCTNCEKEAVNVSLGNLLSYPFVRERVVKNKLAIRGAHYDFVKGTFDLWELDFK 250          
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy Swiss-Prot
Match: CAHC_TOBAC (Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 1.577e-60
Identity = 105/225 (46.67%), Postives = 146/225 (64.89%), Query Frame = 3
Query:  363 PSVSASSNSLGVGLQEVTGSK-LNLFDELKLRFLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGP-SETNAALEFAVKTLQVENILIIGHSCCGGIQTLMSM-QDNSDS-SFIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDFLNCTFEKWTLDF 1025
            P  +A  + +   LQ   GSK  +  + +K  F+ FK  KY +    +  L + Q+PKFMV AC+DSRVCPS +L F+PGEAF++RN+AN+VP   K   S   AA+E+AV  L+VENI++IGHS CGGI+ LMS+  D S+S +FI+ WV  G  AK   +       F  QC  CEKE++N+SL NLLTYP+++E + K+ L + GG+YDF+N  FE W L+F
Sbjct:   89 PIAAARVDQITAELQSSDGSKPFDPVEHMKAGFIHFKTEKYEKNPALYGELSKGQSPKFMVFACSDSRVCPSHVLNFQPGEAFVVRNIANMVPAYDKTRYSGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSLPADGSESTAFIEDWVKIGLPAKAKVQGEHVDKCFADQCTACEKEAVNVSLGNLLTYPFVREGLVKKTLALKGGHYDFVNGGFELWGLEF 313          
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy Swiss-Prot
Match: CAHX_FLABI (Carbonic anhydrase OS=Flaveria bidentis PE=2 SV=2)

HSP 1 Score: 201.445 bits (511), Expect = 2.855e-59
Identity = 97/207 (46.86%), Postives = 136/207 (65.70%), Query Frame = 3
Query:  414 TGSKLNLFDELKLRFLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGP-SETNAALEFAVKTLQVENILIIGHSCCGGIQTLMSMQDNSDSS--FIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDFLNCTFEKWTLDF 1025
            T +  +  + +K  F+ FK  K++     ++ L + Q+PKFMV AC+DSRVCPS +L F+PGEAF++RNVAN+VPP  K   S   AA+E+AV  L+V+ I +IGHS CGGI+ LM+  D    S  FI+ WV     AK    +  N    D QC LCEKE++N+SL NLLTYP++++ ++ + L + GG+YDF+N TFE W LDF
Sbjct:  116 TKAPFDPVERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNKTLALKGGHYDFVNGTFELWALDF 322          
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy Swiss-Prot
Match: CAHX_FLABR (Carbonic anhydrase OS=Flaveria brownii PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 6.110e-59
Identity = 97/207 (46.86%), Postives = 135/207 (65.22%), Query Frame = 3
Query:  414 TGSKLNLFDELKLRFLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGP-SETNAALEFAVKTLQVENILIIGHSCCGGIQTLMSMQDNSDSS--FIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDFLNCTFEKWTLDF 1025
            T +  +  + +K  F+ FK  K++     ++ L + Q+PKFMV AC+DSRVCPS +L F+PGEAF++RNVAN+VPP  K   S   AA+E+AV  L+V+ I +IGHS CGGI+ LM+  D    S  FI+ WV     AK    +  N    D QC LCEKE++N+SL NLLTYP++++ ++   L + GG+YDF+N TFE W LDF
Sbjct:  116 TKAPFDPVERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNNTLALKGGHYDFVNGTFELWALDF 322          
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy Swiss-Prot
Match: CAHX_FLAPR (Carbonic anhydrase OS=Flaveria pringlei PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.170e-58
Identity = 97/207 (46.86%), Postives = 135/207 (65.22%), Query Frame = 3
Query:  414 TGSKLNLFDELKLRFLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGP-SETNAALEFAVKTLQVENILIIGHSCCGGIQTLMSMQDNSDSS--FIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDFLNCTFEKWTLDF 1025
            T +  +  + +K  F+ FK  K++     ++ L + Q+PKFMV AC+DSRVCPS +L F+PGEAF++RNVAN+VPP  K   S   AA+E+AV  L+V+ I +IGHS CGGI+ LM+  D    S  FI+ WV     AK    +  N    D QC LCEKE++N+SL NLLTYP++++ ++   L + GG+YDF+N TFE W LDF
Sbjct:  115 TKAPFDPVERIKSGFVKFKTEKFVTNPVLYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNNTLALKGGHYDFVNGTFELWALDF 321          
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy Swiss-Prot
Match: BCA2_ARATH (Beta carbonic anhydrase 2, chloroplastic OS=Arabidopsis thaliana GN=BCA2 PE=1 SV=3)

HSP 1 Score: 199.519 bits (506), Expect = 1.804e-58
Identity = 99/214 (46.26%), Postives = 139/214 (64.95%), Query Frame = 3
Query:  402 LQEVTGSKLNLFD---ELKLRFLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGP-SETNAALEFAVKTLQVENILIIGHSCCGGIQTLMS--MQDNSDSSFIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDFLNCTFEKWTLDF 1025
            LQ  + S    FD    +K  F++FK  KY      +  L + Q+PK+MV AC+DSRVCPS +L F PG+AF++RN+AN+VPP  K   +   AA+E+AV  L+VENI++IGHS CGGI+ LMS  +  N+ + FI+ WV     AK    + +   +F+ QC  CE+E++N+SL NLLTYP+++E V K  L + GGYYDF+N +FE W L F
Sbjct:  110 LQAASSSDSKSFDPVERIKEGFVTFKKEKYETNPALYGELAKGQSPKYMVFACSDSRVCPSHVLDFHPGDAFVVRNIANMVPPFDKVKYAGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPLDGNNSTDFIEDWVKICLPAKSKVLAESESSAFEDQCGRCEREAVNVSLANLLTYPFVREGVVKGTLALKGGYYDFVNGSFELWELQF 323          
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy Swiss-Prot
Match: CAH1_FLALI (Carbonic anhydrase 1 OS=Flaveria linearis PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 4.741e-58
Identity = 96/207 (46.38%), Postives = 134/207 (64.73%), Query Frame = 3
Query:  414 TGSKLNLFDELKLRFLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGP-SETNAALEFAVKTLQVENILIIGHSCCGGIQTLMSMQDNSDSS--FIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDFLNCTFEKWTLDF 1025
            T +  +  + +K  F+ FK  K++     ++ L + Q+PKFMV AC+DSRVCPS +L F+PGEAF++RNVAN+VPP  K   S   AA+E+AV  L+V+ I +IGHS CGGI+ LM+  D    S  FI+ WV     AK    +  N    D QC  CEKE++N+SL NLLTYP++++ ++   L + GG+YDF+N TFE W LDF
Sbjct:  116 TKAPFDPVERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVQCEKEAVNVSLGNLLTYPFVRDGLRNNTLALKGGHYDFVNGTFELWALDF 322          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0D2RJW7_GOSRA6.537e-11169.13Carbonic anhydrase OS=Gossypium raimondii GN=B456_... [more]
A0A067H0S5_CITSI1.960e-11060.22Carbonic anhydrase OS=Citrus sinensis GN=CISIN_1g0... [more]
D7TU30_VITVI1.321e-10965.46Carbonic anhydrase OS=Vitis vinifera GN=VIT_03s001... [more]
C6TIM7_SOYBN1.348e-10952.78Carbonic anhydrase OS=Glycine max PE=2 SV=1[more]
F6H124_VITVI1.773e-10860.52Carbonic anhydrase OS=Vitis vinifera GN=VIT_18s000... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
BCA5_ARATH3.442e-9655.10Beta carbonic anhydrase 5, chloroplastic OS=Arabid... [more]
BCA6_ARATH9.917e-8956.33Beta carbonic anhydrase 6, mitochondrial OS=Arabid... [more]
BCA4_ARATH5.290e-6948.66Beta carbonic anhydrase 4 OS=Arabidopsis thaliana ... [more]
BCA3_ARATH3.513e-6447.89Beta carbonic anhydrase 3 OS=Arabidopsis thaliana ... [more]
CAHC_TOBAC1.577e-6046.67Carbonic anhydrase, chloroplastic OS=Nicotiana tab... [more]
CAHX_FLABI2.855e-5946.86Carbonic anhydrase OS=Flaveria bidentis PE=2 SV=2[more]
CAHX_FLABR6.110e-5946.86Carbonic anhydrase OS=Flaveria brownii PE=2 SV=1[more]
CAHX_FLAPR1.170e-5846.86Carbonic anhydrase OS=Flaveria pringlei PE=2 SV=1[more]
BCA2_ARATH1.804e-5846.26Beta carbonic anhydrase 2, chloroplastic OS=Arabid... [more]
CAH1_FLALI4.741e-5846.38Carbonic anhydrase 1 OS=Flaveria linearis PE=2 SV=... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001765Carbonic anhydraseSMARTSM00947Pro_CA_2coord: 127..294
e-value: 3.3E-42
score: 156.2
IPR001765Carbonic anhydraseGENE3D3.40.1050.10coord: 100..298
e-value: 2.0E-64
score: 216.4
IPR001765Carbonic anhydrasePFAMPF00484Pro_CAcoord: 135..285
e-value: 6.1E-41
score: 140.2
IPR001765Carbonic anhydrasePANTHERPTHR11002CARBONIC ANHYDRASEcoord: 47..309
IPR001765Carbonic anhydraseSUPERFAMILY53056beta-carbonic anhydrase, cabcoord: 95..298
NoneNo IPR availablePANTHERPTHR11002:SF12SUBFAMILY NOT NAMEDcoord: 47..309
IPR015892Carbonic anhydrase, prokaryotic-like, conserved sitePROSITEPS00705PROK_CO2_ANHYDRASE_2coord: 182..202
IPR015892Carbonic anhydrase, prokaryotic-like, conserved sitePROSITEPS00704PROK_CO2_ANHYDRASE_1coord: 139..146

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0011968 ID=g.arboreum_cottongen_reftransV1_0011968; Name=g.arboreum_cottongen_reftransV1_0011968; organism=Gossypium arboreum; type=contig; length=1141bp
AAATAAAATAAAATAAAAATACAAAAACCCCCAATCTGAAAACTTTACGT
GATGATATGGAGAACACGATCATGGAAACAGAGCTATAAAAGGAAATTCA
TTATTACGAAGCAAATGCAAAGGTGGGAAGAGAAATGGCCTGGTTGATCC
GCTTTAAAGCTCGATCGCTTGTATCAGCGACAAGGTCACTACGCGATACC
CTCGATTCTTATCGCTGCTCACTGTCTCATTTCTCTGGGTTTACTACCGA
TGACTCTGTTCGCAGTTTCCCGAGGAAATGGCTTTGTTCAAAAGCGATGA
GATTGAATGATGTGGACGACATACAATCAAGGTCATCGTCTTCACCGGAT
ATCACTAGGAGGCCCTCGGTTTCTGCTTCTAGCAATTCCCTAGGTGTAGG
ACTACAAGAAGTTACAGGCTCCAAATTGAACTTGTTTGACGAGTTGAAAC
TGAGGTTTCTGAGTTTTAAACATCACAAATATTTGGAAGAATTGGAGCAT
TTTGAAACACTTAAAGAAGCTCAAACACCCAAGTTTATGGTGATTGCTTG
TGCAGATTCCAGGGTGTGTCCTTCTACAATCCTTGGGTTTCGACCAGGGG
AAGCCTTCATGATTCGAAATGTAGCTAATCTTGTTCCTCCACTCCAGAAG
GGACCTTCAGAAACTAACGCTGCCCTTGAATTTGCAGTAAAAACTCTTCA
AGTTGAAAACATATTAATTATCGGTCACAGTTGCTGCGGAGGAATTCAGA
CCCTTATGAGCATGCAAGATAATAGTGACTCCAGTTTTATCAAAACTTGG
GTTACTAATGGGAAAAATGCAAAGTTAACAACAGAATCTGCCGCAAACCA
CCTTAGCTTCGATCAACAATGCCGTCTCTGTGAGAAAGAATCCATAAATA
TGTCGCTAATGAACTTGCTAACATATCCGTGGATAAAAGAGAAGGTGAAG
AAAGAGATGCTGTTTGTTCATGGAGGATACTATGATTTTCTCAACTGTAC
ATTTGAGAAGTGGACGCTTGATTTCAAGGGAGGCAGTGATGAAGAAAAGG
GAAGGTTCTTCGTCAAAGATCAACAACTTTGGTGCTGACTGATGCGTTCT
TGGCCATTTTATATATATATATATATATATATTTGAAACCT
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR001765Carbonic_anhydrase
IPR015892Carbonic_anhydrase_CS
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0004089carbonate dehydratase activity
Vocabulary: Biological Process
TermDefinition
GO:0015976carbon utilization