g.arboreum_cottongen_reftransV1_0011968, g.arboreum_cottongen_reftransV1_0011968 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy TrEMBL
Match: A0A0D2RJW7_GOSRA (Carbonic anhydrase OS=Gossypium raimondii GN=B456_005G225400 PE=3 SV=1) HSP 1 Score: 338.576 bits (867), Expect = 6.537e-111 Identity = 159/230 (69.13%), Postives = 190/230 (82.61%), Query Frame = 3 Query: 399 GLQEVTGSKLNLFDELKLRFLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGPSETNAALEFAVKTLQVENILIIGHSCCGGIQTLMSMQDNSD-SSFIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDFLNCTFEKWTLDFKGGSDEEKGRFFVKDQQLWC 1085 G+ E+ S +LFD+LK FLSFK HKY+E LE ++ L + Q PKFMVIACADSRVCPSTILGF PGEAFM+RNVAN+VP + GPSETNAALEFAV +L+VEN+ IIGHSCCGGI+ LMSMQD ++ SSFI++WV GKNAKL+T++A+++LSFDQQC CEKESIN SL+NLLTYPWI+EKVKK ML +HGGYYDF+NCTFEKWTLD+KG K R VKD+ WC Sbjct: 70 GIMEME-SGCDLFDKLKNGFLSFKSHKYMENLECYQALAKGQAPKFMVIACADSRVCPSTILGFEPGEAFMVRNVANMVPTYESGPSETNAALEFAVNSLEVENVFIIGHSCCGGIRALMSMQDKAESSSFIRSWVIVGKNAKLSTKAASSNLSFDQQCTHCEKESINNSLLNLLTYPWIEEKVKKGMLSLHGGYYDFVNCTFEKWTLDYKGSIMNGKNRVVVKDRLFWC 298
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy TrEMBL
Match: A0A067H0S5_CITSI (Carbonic anhydrase OS=Citrus sinensis GN=CISIN_1g020134mg PE=3 SV=1) HSP 1 Score: 336.65 bits (862), Expect = 1.960e-110 Identity = 168/279 (60.22%), Postives = 202/279 (72.40%), Query Frame = 3 Query: 297 MRLNDVDDIQSRSSSSPDITRRP--SVSASSNSLGVGLQE-------VTGSK----LNLFDELKLRFLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGPSETNAALEFAVKTLQVENILIIGHSCCGGIQTLMSMQDNSDS--SFIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDFLNCTFEKWTLDFKGG--SDEEKGRFFVKDQQLW 1082 M+L + D Q +P + RR + SS+S L G+K L+ F+E+K RFLSFK +KY EELEHF+ L +AQ+PKFMVIACADSRVCPS ILG +PGE FMIRNVANLVPPL+ GPSETNAALEFAV TL+V+NIL+IGHS CGGIQ LM MQD+ DS S + WV N K AK T++ HLSFDQQCR CEKESI+ S++NLLTYPWI+E+V+KE+LF+HGGYYD LNCTFEKWTLD+KG +EE GR +KD W Sbjct: 1 MKLEKIRDAQQ--GFTPVLKRRSFSKLETSSSSTAAALTRDRTSYKVQDGAKSCGGLDYFEEMKQRFLSFKKNKYFEELEHFQNLAKAQSPKFMVIACADSRVCPSYILGLQPGETFMIRNVANLVPPLENGPSETNAALEFAVNTLEVQNILVIGHSDCGGIQALMRMQDDVDSRQSLTENWVVNAKVAKFRTKAYTAHLSFDQQCRHCEKESISRSILNLLTYPWIEERVRKELLFIHGGYYDLLNCTFEKWTLDYKGRKVDEEEVGRHSIKDHSFW 277
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy TrEMBL
Match: D7TU30_VITVI (Carbonic anhydrase OS=Vitis vinifera GN=VIT_03s0017g00270 PE=3 SV=1) HSP 1 Score: 335.495 bits (859), Expect = 1.321e-109 Identity = 163/249 (65.46%), Postives = 193/249 (77.51%), Query Frame = 3 Query: 369 VSASSNSLGVGLQEVTGSKL----------NLFDELKLRFLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGPSETNAALEFAVKTLQVENILIIGHSCCGGIQTLMSMQDNSD-SSFIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDFLNCTFEKWTLDFKGGSDEEKGRFFVKDQQLW 1082 + AS S G+ QE+T +L ++FDE+K RFLSFK HKYLE LE F+ L AQ PKFMVIACADSRVCPS ILGF PGEAFM+RNVANLVP + GP+ETNAALEFAV TL+VENIL+IGHSCCGGI+ LM M++ D SSFI++WV GKNAKL ++ A+ LSFDQQCR CEKESIN SL+NLLTYPWIKE+V++ ML +HGGYYDF+NCTFEKWTLD+K E GR+ VKD+ W Sbjct: 58 LKASRESPGL-TQELTSDRLESIAEIENRYDVFDEVKHRFLSFKKHKYLENLECFQNLATAQAPKFMVIACADSRVCPSKILGFEPGEAFMVRNVANLVPLYENGPTETNAALEFAVNTLEVENILVIGHSCCGGIRALMGMEEEVDSSSFIQSWVVVGKNAKLRAKATASKLSFDQQCRNCEKESINCSLLNLLTYPWIKERVERGMLSIHGGYYDFVNCTFEKWTLDYK-----ESGRYLVKDRVFW 300
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy TrEMBL
Match: C6TIM7_SOYBN (Carbonic anhydrase OS=Glycine max PE=2 SV=1) HSP 1 Score: 335.88 bits (860), Expect = 1.348e-109 Identity = 171/324 (52.78%), Postives = 216/324 (66.67%), Query Frame = 3 Query: 135 MAWLIRFKARSLVSATRSLRDTLDSYRCSLSHFSGFTTDDSVRSFPR--KWL----CSKAMRLNDVDDIQSRSSSSPDITRRPSVSASSNSLGVGLQEVTGSKLNLFDELKLRFLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGPSETNAALEFAVKTLQVENILIIGHSCCGGIQTLMSMQDNSDS-SFIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDFLNCTFEKWTLDFKGGSDEEKGRFFVKDQQLWC 1085 M W IR + SL+ + L + C FS T+ R +P+ W+ C A L + + Q S+ R + L G S NLF +K FLSFK KY++ELEHFE L EAQ PKFMVIACADSRVCPS ILGF+PGE FMIRN+ANLVP ++ GPSE NAAL+FAV TLQVENIL+IGHS C GI+ LM+MQ++++S +FI WV NGK AK T++A HLSFDQQC+ CEKESIN SL+NLL+YPWI+++V+KE+L +HGGYY+F NC+FEKWTLDFK + EE + VK+Q+ WC Sbjct: 1 MVWPIRSRISSLLCSKAPLVGSYIYDSCGCLRFSAPTSSSITRHWPKIMDWVQMDRCRAAASLPSIKEKQPEGHSN-----RVRLGQEIKGLDEGNMAEIDSYQNLFGLMKQGFLSFKSQKYIKELEHFEALAEAQFPKFMVIACADSRVCPSNILGFQPGEVFMIRNIANLVPVMKNGPSECNAALQFAVTTLQVENILVIGHSSCAGIEALMNMQEDAESRNFIHKWVANGKLAKQRTKAATAHLSFDQQCKFCEKESINQSLLNLLSYPWIQDRVRKELLSLHGGYYNFSNCSFEKWTLDFKQCNVEEGSSYVVKEQEFWC 319
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy TrEMBL
Match: F6H124_VITVI (Carbonic anhydrase OS=Vitis vinifera GN=VIT_18s0001g07400 PE=3 SV=1) HSP 1 Score: 332.798 bits (852), Expect = 1.773e-108 Identity = 164/271 (60.52%), Postives = 203/271 (74.91%), Query Frame = 3 Query: 324 QSRSSSSPDITRR--PSVSASSNSLGVGLQ-------------EVTGSKLNLFDELKLRFLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGPSETNAALEFAVKTLQVENILIIGHSCCGGIQTLMSMQDN-SDSSFIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDFLNCTFEKWTLDFKGGSDEEKG-RFFVKDQQLWC 1085 ++ S P + R + ASS+SLG G + T L+ F+ELK RFL FK KYLEE EHF+ L +AQ+PKFMVIACADSRVCPS ILGF+PGEAFMIRNVANLVPP++ GPSETNAALEFAV TL+VENIL+IGHS C GI+TL+ M+D+ + SSF++ WV NGK AKL T++AA HL F QQC+ CEKESIN SL+NLLTYPWI+++ +K +L +HGGYYDFLNCTFEKWT+DFK S E++G + VK++ WC Sbjct: 43 ETHLGSLPSVKRNLVSRLEASSDSLGCGQHLMSNKMGNEMESLDKTDQGLDFFEELKHRFLCFKKQKYLEEPEHFQALAKAQSPKFMVIACADSRVCPSNILGFQPGEAFMIRNVANLVPPVENGPSETNAALEFAVNTLEVENILVIGHSSCAGIETLVRMRDDVNSSSFVENWVANGKVAKLRTKAAAGHLGFYQQCKYCEKESINHSLLNLLTYPWIEDRERKGLLSIHGGYYDFLNCTFEKWTIDFKRSSIEKEGPKCLVKNRAFWC 313
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy Swiss-Prot
Match: BCA5_ARATH (Beta carbonic anhydrase 5, chloroplastic OS=Arabidopsis thaliana GN=BCA5 PE=2 SV=1) HSP 1 Score: 295.819 bits (756), Expect = 3.442e-96 Identity = 135/245 (55.10%), Postives = 181/245 (73.88%), Query Frame = 3 Query: 357 RRPSVSASSNSLGVGLQEVTGSKLNLFDELKLRFLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGPSETNAALEFAVKTLQVENILIIGHSCCGGIQTLMSMQDNSDS-SFIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDFLNCTFEKWTLDFKG--GSDEEKGRFFVKDQQLW 1082 + P ++ +N + + Q T ++FD++K RFL+FK KY+++ EH++ L +AQ PKF+VIACADSRVCPS +LGF+PG+AF +RN+ANLVPP + GP+ET AALEF+V TL VENIL+IGHS CGGIQ LM M+D DS SFI WV GK AK +T++ A++L FD QC+ CEK SIN SL LL YPWI+EKV++ L +HGGYY+F++CTFEKWT+D+ G +E VKD+ +W Sbjct: 60 KTPGLTQEANGVAIDRQNNT----DVFDDMKQRFLAFKKLKYMDDFEHYKNLADAQAPKFLVIACADSRVCPSAVLGFQPGDAFTVRNIANLVPPYESGPTETKAALEFSVNTLNVENILVIGHSRCGGIQALMKMEDEGDSRSFIHNWVVVGKKAKESTKAVASNLHFDHQCQHCEKASINHSLERLLGYPWIEEKVRQGSLSLHGGYYNFVDCTFEKWTVDYAASRGKKKEGSGIAVKDRSVW 300
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy Swiss-Prot
Match: BCA6_ARATH (Beta carbonic anhydrase 6, mitochondrial OS=Arabidopsis thaliana GN=BCA6 PE=2 SV=1) HSP 1 Score: 276.559 bits (706), Expect = 9.917e-89 Identity = 129/229 (56.33%), Postives = 169/229 (73.80%), Query Frame = 3 Query: 402 LQEVTGSKLNLFDELKLRFLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGPSETNAALEFAVKTLQVENILIIGHSCCGGIQTLMSMQDN--SDSSFIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDFLNCTFEKWTLDFKGGSDEEKGRFFVKDQQLW 1082 L T + + DE++ RFL FK KYL E+E F+ L AQ+PK MVI CADSRVCPS +LGF+PGEAF IRNVANLV P+Q GP+ETN+ALEFAV TLQVENI+++GHS CGGI LMS Q++ SS ++ WV NGK AKL T+ A++HLSFD+QCR CEKESI S+MNL+TY WI+++VK+ + +HG YY+ +C+ EKW L SD+ F++ D+++W Sbjct: 65 LNRETETSYDFLDEMRHRFLKFKRQKYLPEIEKFKALAIAQSPKVMVIGCADSRVCPSYVLGFQPGEAFTIRNVANLVTPVQNGPTETNSALEFAVTTLQVENIIVMGHSNCGGIAALMSHQNHQGQHSSLVERWVMNGKAAKLRTQLASSHLSFDEQCRNCEKESIKDSVMNLITYSWIRDRVKRGEVKIHGCYYNLSDCSLEKWRLS----SDKTNYGFYISDREIW 289
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy Swiss-Prot
Match: BCA4_ARATH (Beta carbonic anhydrase 4 OS=Arabidopsis thaliana GN=BCA4 PE=1 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 5.290e-69 Identity = 109/224 (48.66%), Postives = 152/224 (67.86%), Query Frame = 3 Query: 369 VSASSNSLGVGLQEVTGSKLNLFDELKLRFLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPL-QKGPSETNAALEFAVKTLQVENILIIGHSCCGGIQTLMSMQDNS---DSSFIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDFLNCTFEKWTLDFK 1028 +A +L L+E+ S + + +K F FK KYL+ F L + QTPKF+V AC+DSRVCPS IL F+PGEAF++RN+AN+VPP QK S AA+E+AV L+VENIL+IGHSCCGGI+ LMS++D++ S FI+ WV G +A+ + LS+D QC CEKE++N+SL NLL+YP+++ +V K L + GG+Y+F+ TF+ W LDFK Sbjct: 49 AAAKIKALTAELKELDSSNSDAIERIKTGFTQFKTEKYLKNSTLFNHLAKTQTPKFLVFACSDSRVCPSHILNFQPGEAFVVRNIANMVPPFDQKRHSGVGAAVEYAVVHLKVENILVIGHSCCGGIKGLMSIEDDAAPTQSDFIENWVKIGASARNKIKEEHKDLSYDDQCNKCEKEAVNVSLGNLLSYPFVRAEVVKNTLAIRGGHYNFVKGTFDLWELDFK 272
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy Swiss-Prot
Match: BCA3_ARATH (Beta carbonic anhydrase 3 OS=Arabidopsis thaliana GN=BCA3 PE=2 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 3.513e-64 Identity = 102/213 (47.89%), Postives = 145/213 (68.08%), Query Frame = 3 Query: 402 LQEVTGSKLNLFDELKLRFLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGP-SETNAALEFAVKTLQVENILIIGHSCCGGIQTLMSMQDN---SDSSFIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDFLNCTFEKWTLDFK 1028 L+E+ +KL+ + +K FL FK + Y + + +L ++QTPKF+V ACADSRV PS IL F+ GEAF++RN+AN+VPP K S AALE+ + L VENIL+IGHSCCGGI+ LM+++DN + + FI+ W+ AK + LSF+ QC CEKE++N+SL NLL+YP+++E+V K L + G +YDF+ TF+ W LDFK Sbjct: 38 LEELDSNKLDAVERIKSGFLHFKTNNYEKNPTLYNSLAKSQTPKFLVFACADSRVSPSHILNFQLGEAFIVRNIANMVPPYDKTKHSNVGAALEYPITVLNVENILVIGHSCCGGIKGLMAIEDNTAPTKTEFIENWIQICAPAKNRIKQDCKDLSFEDQCTNCEKEAVNVSLGNLLSYPFVRERVVKNKLAIRGAHYDFVKGTFDLWELDFK 250
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy Swiss-Prot
Match: CAHC_TOBAC (Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 1.577e-60 Identity = 105/225 (46.67%), Postives = 146/225 (64.89%), Query Frame = 3 Query: 363 PSVSASSNSLGVGLQEVTGSK-LNLFDELKLRFLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGP-SETNAALEFAVKTLQVENILIIGHSCCGGIQTLMSM-QDNSDS-SFIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDFLNCTFEKWTLDF 1025 P +A + + LQ GSK + + +K F+ FK KY + + L + Q+PKFMV AC+DSRVCPS +L F+PGEAF++RN+AN+VP K S AA+E+AV L+VENI++IGHS CGGI+ LMS+ D S+S +FI+ WV G AK + F QC CEKE++N+SL NLLTYP+++E + K+ L + GG+YDF+N FE W L+F Sbjct: 89 PIAAARVDQITAELQSSDGSKPFDPVEHMKAGFIHFKTEKYEKNPALYGELSKGQSPKFMVFACSDSRVCPSHVLNFQPGEAFVVRNIANMVPAYDKTRYSGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSLPADGSESTAFIEDWVKIGLPAKAKVQGEHVDKCFADQCTACEKEAVNVSLGNLLTYPFVREGLVKKTLALKGGHYDFVNGGFELWGLEF 313
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy Swiss-Prot
Match: CAHX_FLABI (Carbonic anhydrase OS=Flaveria bidentis PE=2 SV=2) HSP 1 Score: 201.445 bits (511), Expect = 2.855e-59 Identity = 97/207 (46.86%), Postives = 136/207 (65.70%), Query Frame = 3 Query: 414 TGSKLNLFDELKLRFLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGP-SETNAALEFAVKTLQVENILIIGHSCCGGIQTLMSMQDNSDSS--FIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDFLNCTFEKWTLDF 1025 T + + + +K F+ FK K++ ++ L + Q+PKFMV AC+DSRVCPS +L F+PGEAF++RNVAN+VPP K S AA+E+AV L+V+ I +IGHS CGGI+ LM+ D S FI+ WV AK + N D QC LCEKE++N+SL NLLTYP++++ ++ + L + GG+YDF+N TFE W LDF Sbjct: 116 TKAPFDPVERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNKTLALKGGHYDFVNGTFELWALDF 322
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy Swiss-Prot
Match: CAHX_FLABR (Carbonic anhydrase OS=Flaveria brownii PE=2 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 6.110e-59 Identity = 97/207 (46.86%), Postives = 135/207 (65.22%), Query Frame = 3 Query: 414 TGSKLNLFDELKLRFLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGP-SETNAALEFAVKTLQVENILIIGHSCCGGIQTLMSMQDNSDSS--FIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDFLNCTFEKWTLDF 1025 T + + + +K F+ FK K++ ++ L + Q+PKFMV AC+DSRVCPS +L F+PGEAF++RNVAN+VPP K S AA+E+AV L+V+ I +IGHS CGGI+ LM+ D S FI+ WV AK + N D QC LCEKE++N+SL NLLTYP++++ ++ L + GG+YDF+N TFE W LDF Sbjct: 116 TKAPFDPVERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNNTLALKGGHYDFVNGTFELWALDF 322
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy Swiss-Prot
Match: CAHX_FLAPR (Carbonic anhydrase OS=Flaveria pringlei PE=2 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.170e-58 Identity = 97/207 (46.86%), Postives = 135/207 (65.22%), Query Frame = 3 Query: 414 TGSKLNLFDELKLRFLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGP-SETNAALEFAVKTLQVENILIIGHSCCGGIQTLMSMQDNSDSS--FIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDFLNCTFEKWTLDF 1025 T + + + +K F+ FK K++ ++ L + Q+PKFMV AC+DSRVCPS +L F+PGEAF++RNVAN+VPP K S AA+E+AV L+V+ I +IGHS CGGI+ LM+ D S FI+ WV AK + N D QC LCEKE++N+SL NLLTYP++++ ++ L + GG+YDF+N TFE W LDF Sbjct: 115 TKAPFDPVERIKSGFVKFKTEKFVTNPVLYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNNTLALKGGHYDFVNGTFELWALDF 321
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy Swiss-Prot
Match: BCA2_ARATH (Beta carbonic anhydrase 2, chloroplastic OS=Arabidopsis thaliana GN=BCA2 PE=1 SV=3) HSP 1 Score: 199.519 bits (506), Expect = 1.804e-58 Identity = 99/214 (46.26%), Postives = 139/214 (64.95%), Query Frame = 3 Query: 402 LQEVTGSKLNLFD---ELKLRFLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGP-SETNAALEFAVKTLQVENILIIGHSCCGGIQTLMS--MQDNSDSSFIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDFLNCTFEKWTLDF 1025 LQ + S FD +K F++FK KY + L + Q+PK+MV AC+DSRVCPS +L F PG+AF++RN+AN+VPP K + AA+E+AV L+VENI++IGHS CGGI+ LMS + N+ + FI+ WV AK + + +F+ QC CE+E++N+SL NLLTYP+++E V K L + GGYYDF+N +FE W L F Sbjct: 110 LQAASSSDSKSFDPVERIKEGFVTFKKEKYETNPALYGELAKGQSPKYMVFACSDSRVCPSHVLDFHPGDAFVVRNIANMVPPFDKVKYAGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPLDGNNSTDFIEDWVKICLPAKSKVLAESESSAFEDQCGRCEREAVNVSLANLLTYPFVREGVVKGTLALKGGYYDFVNGSFELWELQF 323
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy Swiss-Prot
Match: CAH1_FLALI (Carbonic anhydrase 1 OS=Flaveria linearis PE=2 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 4.741e-58 Identity = 96/207 (46.38%), Postives = 134/207 (64.73%), Query Frame = 3 Query: 414 TGSKLNLFDELKLRFLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGP-SETNAALEFAVKTLQVENILIIGHSCCGGIQTLMSMQDNSDSS--FIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDFLNCTFEKWTLDF 1025 T + + + +K F+ FK K++ ++ L + Q+PKFMV AC+DSRVCPS +L F+PGEAF++RNVAN+VPP K S AA+E+AV L+V+ I +IGHS CGGI+ LM+ D S FI+ WV AK + N D QC CEKE++N+SL NLLTYP++++ ++ L + GG+YDF+N TFE W LDF Sbjct: 116 TKAPFDPVERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVQCEKEAVNVSLGNLLTYPFVRDGLRNNTLALKGGHYDFVNGTFELWALDF 322 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0011968 ID=g.arboreum_cottongen_reftransV1_0011968; Name=g.arboreum_cottongen_reftransV1_0011968; organism=Gossypium arboreum; type=contig; length=1141bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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