g.arboreum_cottongen_reftransV1_0011968, g.arboreum_cottongen_reftransV1_0011968 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0011968
Unique Nameg.arboreum_cottongen_reftransV1_0011968
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length1141
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr10chromosomeg.arboreum_cottongen_reftransV1_0011968:1..1141 .
Chr10:17965416..17967588 +		n/a
Homology
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy TrEMBL
Match: A0A0B0MYI8_GOSAR (Carbonic anhydrase OS=Gossypium arboreum GN=F383_29357 PE=3 SV=1)

HSP 1 Score: 660.988 bits (1704), Expect = 0.000e+0
Identity = 317/317 (100.00%), Postives = 317/317 (100.00%), Query Frame = 3 
Query:  135 MAWLIRFKARSLVSATRSLRDTLDSYRCSLSHFSGFTTDDSVRSFPRKWLCSKAMRLNDVDDIQSRSSSSPDITRRPSVSASSNSLGVGLQEVTGSKLNLFDELKLRFLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGPSETNAALEFAVKTLQVENILIIGHSCCGGIQTLMSMQDNSDSSFIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDFLNCTFEKWTLDFKGGSDEEKGRFFVKDQQLWC 1085
            MAWLIRFKARSLVSATRSLRDTLDSYRCSLSHFSGFTTDDSVRSFPRKWLCSKAMRLNDVDDIQSRSSSSPDITRRPSVSASSNSLGVGLQEVTGSKLNLFDELKLRFLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGPSETNAALEFAVKTLQVENILIIGHSCCGGIQTLMSMQDNSDSSFIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDFLNCTFEKWTLDFKGGSDEEKGRFFVKDQQLWC
Sbjct:    1 MAWLIRFKARSLVSATRSLRDTLDSYRCSLSHFSGFTTDDSVRSFPRKWLCSKAMRLNDVDDIQSRSSSSPDITRRPSVSASSNSLGVGLQEVTGSKLNLFDELKLRFLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGPSETNAALEFAVKTLQVENILIIGHSCCGGIQTLMSMQDNSDSSFIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDFLNCTFEKWTLDFKGGSDEEKGRFFVKDQQLWC 317
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy TrEMBL
Match: A0A0D2TU51_GOSRA (Carbonic anhydrase OS=Gossypium raimondii GN=B456_009G230100 PE=3 SV=1)

HSP 1 Score: 650.973 bits (1678), Expect = 0.000e+0
Identity = 312/317 (98.42%), Postives = 313/317 (98.74%), Query Frame = 3 
Query:  135 MAWLIRFKARSLVSATRSLRDTLDSYRCSLSHFSGFTTDDSVRSFPRKWLCSKAMRLNDVDDIQSRSSSSPDITRRPSVSASSNSLGVGLQEVTGSKLNLFDELKLRFLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGPSETNAALEFAVKTLQVENILIIGHSCCGGIQTLMSMQDNSDSSFIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDFLNCTFEKWTLDFKGGSDEEKGRFFVKDQQLWC 1085
            MAWLIRFKARSL SATR LRDTLDSYRCS SHFSGFTTDDSVRSFPRKWLCSKAMRLNDVDDIQSRSSSSP+ITRRPSVSASSNSLGVGLQEVTGSKLNLFDELK RFLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGPSETNAALEFAVKTLQVENILIIGHSCCGGIQTLMSMQDNSDSSFIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDFLNCTFEKWTLDFKGGSDEEKGRFFVKDQQLWC
Sbjct:    1 MAWLIRFKARSLASATRPLRDTLDSYRCSQSHFSGFTTDDSVRSFPRKWLCSKAMRLNDVDDIQSRSSSSPEITRRPSVSASSNSLGVGLQEVTGSKLNLFDELKQRFLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGPSETNAALEFAVKTLQVENILIIGHSCCGGIQTLMSMQDNSDSSFIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDFLNCTFEKWTLDFKGGSDEEKGRFFVKDQQLWC 317
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy TrEMBL
Match: A0A0D2TPM0_GOSRA (Carbonic anhydrase OS=Gossypium raimondii GN=B456_009G230100 PE=3 SV=1)

HSP 1 Score: 546.969 bits (1408), Expect = 0.000e+0
Identity = 261/263 (99.24%), Postives = 262/263 (99.62%), Query Frame = 3 
Query:  297 MRLNDVDDIQSRSSSSPDITRRPSVSASSNSLGVGLQEVTGSKLNLFDELKLRFLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGPSETNAALEFAVKTLQVENILIIGHSCCGGIQTLMSMQDNSDSSFIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDFLNCTFEKWTLDFKGGSDEEKGRFFVKDQQLWC 1085
            MRLNDVDDIQSRSSSSP+ITRRPSVSASSNSLGVGLQEVTGSKLNLFDELK RFLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGPSETNAALEFAVKTLQVENILIIGHSCCGGIQTLMSMQDNSDSSFIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDFLNCTFEKWTLDFKGGSDEEKGRFFVKDQQLWC
Sbjct:    1 MRLNDVDDIQSRSSSSPEITRRPSVSASSNSLGVGLQEVTGSKLNLFDELKQRFLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGPSETNAALEFAVKTLQVENILIIGHSCCGGIQTLMSMQDNSDSSFIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDFLNCTFEKWTLDFKGGSDEEKGRFFVKDQQLWC 263
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy TrEMBL
Match: A0A061FED8_THECC (Carbonic anhydrase OS=Theobroma cacao GN=TCM_034497 PE=3 SV=1)

HSP 1 Score: 496.123 bits (1276), Expect = 2.263e-172
Identity = 252/330 (76.36%), Postives = 273/330 (82.73%), Query Frame = 3 
Query:  135 MAWLIRFKARSLVSATRSLRDTLDSYRCSLSHFSGFTTDDSVRSFPRKWLCSKAMRLNDVDDIQSRSSSSPDITRRPSVS---ASSNSLGVGLQEVTGS----------KLNLFDELKLRFLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGPSETNAALEFAVKTLQVENILIIGHSCCGGIQTLMSMQDNSDSSFIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDFLNCTFEKWTLDFKGGSDEEKGRFFVKDQQLWC 1085
            MAWLIR KAR LVSATR LR  +DS+ CS  HFS  T D SV S PRKWL SKAMRLNDVDD QSRSSSSP I RRP VS    SSNSL   L E TGS          +++LFDELK RFLSFK HKYLEELEHF+TLKEAQ+PKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPP + G SETNAALEFAVKTL+VENILIIGHSCCGGIQTLMSM+D+ DSSFIK+WVT GK AK  TE+AANHLSFDQQCRLCEKESIN SL+NLLTY WI++KV++ +LFVHGGYYDFLNC+FEKWTLDFKG S EE  R  VKDQ+LWC
Sbjct:    1 MAWLIRSKARLLVSATRPLRAPVDSFHCS--HFSDLT-DHSVCSSPRKWLRSKAMRLNDVDDTQSRSSSSPQINRRPPVSQLEVSSNSLA--LHEFTGSEVQNVNNSGVRVDLFDELKQRFLSFKRHKYLEELEHFQTLKEAQSPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPFENGLSETNAALEFAVKTLEVENILIIGHSCCGGIQTLMSMRDDGDSSFIKSWVTTGKVAKSRTEAAANHLSFDQQCRLCEKESINRSLLNLLTYSWIEDKVREGLLFVHGGYYDFLNCSFEKWTLDFKGSSGEEGARLLVKDQELWC 325
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy TrEMBL
Match: A0A0D2S6J6_GOSRA (Carbonic anhydrase OS=Gossypium raimondii GN=B456_009G230100 PE=3 SV=1)

HSP 1 Score: 382.104 bits (980), Expect = 1.276e-129
Identity = 185/190 (97.37%), Postives = 186/190 (97.89%), Query Frame = 3 
Query:  135 MAWLIRFKARSLVSATRSLRDTLDSYRCSLSHFSGFTTDDSVRSFPRKWLCSKAMRLNDVDDIQSRSSSSPDITRRPSVSASSNSLGVGLQEVTGSKLNLFDELKLRFLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGPSETNAALEFAVKTLQV 704
            MAWLIRFKARSL SATR LRDTLDSYRCS SHFSGFTTDDSVRSFPRKWLCSKAMRLNDVDDIQSRSSSSP+ITRRPSVSASSNSLGVGLQEVTGSKLNLFDELK RFLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGPSETNAALEFAVKTLQV
Sbjct:    1 MAWLIRFKARSLASATRPLRDTLDSYRCSQSHFSGFTTDDSVRSFPRKWLCSKAMRLNDVDDIQSRSSSSPEITRRPSVSASSNSLGVGLQEVTGSKLNLFDELKQRFLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGPSETNAALEFAVKTLQV 190
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy TrEMBL
Match: A0A067KZ65_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15879 PE=4 SV=1)

HSP 1 Score: 360.533 bits (924), Expect = 3.232e-119
Identity = 184/326 (56.44%), Postives = 224/326 (68.71%), Query Frame = 3 
Query:  135 MAWLIRFKARSLVSATRSLRDTLDSYRCSLSHFSGFTTDDSVRSFPRKWLCSKAMRLNDVDDIQSRSSSSPDITRRPSVSASSNSLG-------VGLQEV--TGSKLNLFDELKLRFLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGPSETNAALEFAVKTLQVENILIIGHSCCGGIQTLMSMQDNSDSSFIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDFLNCTFEKWTLDFKGGSDEEKGRFFVKDQQLWC 1085
            M W  R +  S+V+A  + R     +    S FS      ++  FPR WL S + +L  V+D++    SS        V AS +SLG       V +Q V  +G + N FDE+K RFL+FK +KYL+E EHF+ L E Q+PKFMVIAC DSRVCPS ILGF+PGEAF +RNVAN+VPPL+ GP+ETNAALEFAV TL+VENI +IGHS C GIQ LMS QD  +SSFI+ WV     AKL TE+ A+ LSFDQQC+ CEKESIN SL+NLLTYPWI+ +V+KEMLFVHGGYYDFLNCTFEKWTLDF  G+     RF  KD + WC
Sbjct:    1 MVWQTRLRTGSIVTAVVAFRHVSVKWGFHGSPFS------AIDGFPRNWLNSASEKLAKVNDVRLGFPSSHKENPILRVDASISSLGLVQEDRSVQVQNVPKSGGRQNSFDEMKQRFLNFKQYKYLKEAEHFKNLAELQSPKFMVIACVDSRVCPSNILGFQPGEAFTVRNVANIVPPLENGPTETNAALEFAVNTLEVENIFVIGHSNCAGIQALMSTQDEKNSSFIEKWVATADIAKLRTEADASGLSFDQQCKYCEKESINRSLLNLLTYPWIEVRVRKEMLFVHGGYYDFLNCTFEKWTLDFIEGN-----RFSAKDTEFWC 315
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy TrEMBL
Match: B9H6V9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s17860g PE=4 SV=2)

HSP 1 Score: 347.821 bits (891), Expect = 4.040e-114
Identity = 183/329 (55.62%), Postives = 225/329 (68.39%), Query Frame = 3 
Query:  135 MAWLIRFKARSLVSATRSLRDTLDSYRCSLSHFSGFTT-DDSVRSFPRKWLCSKAMRLNDVDDIQSRSSSSPDITRRPSVSASSNSLGVGL-QEV----------TGSKLNLFDELKLRFLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGPSETNAALEFAVKTLQVENILIIGHSCCGGIQTLMSMQDNSDSSFIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDFLNCTFEKWTLDFKGGSDEEKGRFFVKDQQLWC 1085
            M W IR K  S+++   SLR +  S +     FS F+   +S   F R WL S   +L  VD+   R S  P +  +  +   + S+  GL QE+          T  +++ FDE+K RF+SFK  KYL E+EHF+TL EAQ+PKFMVIAC DSRVCPS ILGF+PGEAFM+RNVANLVPPL+ G +ETNAALEFAVKTLQV+NI +IGHSCC GIQTLM+MQD+ +SSF + WV N K AKL T+ A   LSFDQQC+ CEKESIN SL+NLLTYPWI+E+V+K  L + GGYYDFL CTFE WTLDFK  +     R  VKD+  WC
Sbjct:    1 MIWGIRSKTSSIITTMASLRPS--SVKGDPVQFSPFSAITNSFMGFHRNWL-SLRTKLGRVDNTWLRLS--PSLKEKSVLRLDAWSISAGLAQELKKFKIQNMSETDGRVDFFDEMKQRFMSFKKQKYLGEVEHFKTLAEAQSPKFMVIACVDSRVCPSNILGFQPGEAFMVRNVANLVPPLENGRTETNAALEFAVKTLQVQNIFVIGHSCCAGIQTLMTMQDDENSSFTEKWVANAKVAKLRTKEAI-RLSFDQQCKHCEKESINCSLLNLLTYPWIEERVRKGTLSLQGGYYDFLRCTFEIWTLDFKESNVSHGSRISVKDKAFWC 323
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy TrEMBL
Match: A0A061E8X3_THECC (Carbonic anhydrase OS=Theobroma cacao GN=TCM_007383 PE=3 SV=1)

HSP 1 Score: 344.739 bits (883), Expect = 9.599e-114
Identity = 164/252 (65.08%), Postives = 197/252 (78.17%), Query Frame = 3 
Query:  333 SSSSPDITRRPSVSASSNSLGVGLQEVTGSKLNLFDELKLRFLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGPSETNAALEFAVKTLQVENILIIGHSCCGGIQTLMSMQDNSD-SSFIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDFLNCTFEKWTLDFKGGSDEEKGRFFVKDQQLWC 1085
            S+  P +TR P      + + +G      +  +LF+E+K  FLSFK HKY+E LE F+ L + Q PKFMVIACADSRVCPS ILGF+PGEAFM+RNVAN+VP  + GPSETNAALEFAV +L+VENILIIGHSCCGGI+ LMSMQD  D SSFI++WV  GKNAKL+T++AA++LSFDQQC  CEKESIN SL+NLLTYPWI+EKVKK  L +HGGYYDF++CTFEKWTLD+KG   E K R  VK+Q  WC
Sbjct:   22 SAEPPALTREPKSDKQESIMEMG------NGCDLFNEMKNNFLSFKKHKYMENLELFQALSKGQAPKFMVIACADSRVCPSNILGFKPGEAFMVRNVANMVPTYESGPSETNAALEFAVNSLEVENILIIGHSCCGGIRALMSMQDEVDSSSFIRSWVIVGKNAKLSTKAAASNLSFDQQCTHCEKESINCSLLNLLTYPWIEEKVKKGELSLHGGYYDFVDCTFEKWTLDYKGSVMEGKNRVVVKNQSFWC 267
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy TrEMBL
Match: A0A061E269_THECC (Carbonic anhydrase OS=Theobroma cacao GN=TCM_007383 PE=3 SV=1)

HSP 1 Score: 345.51 bits (885), Expect = 1.099e-113
Identity = 169/272 (62.13%), Postives = 205/272 (75.37%), Query Frame = 3 
Query:  273 RKWLCSKAMRLNDVDDIQSRSSSSPDITRRPSVSASSNSLGVGLQEVTGSKLNLFDELKLRFLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGPSETNAALEFAVKTLQVENILIIGHSCCGGIQTLMSMQDNSD-SSFIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDFLNCTFEKWTLDFKGGSDEEKGRFFVKDQQLWC 1085
            R W C    R N    +++ S+  P +TR P      + + +G      +  +LF+E+K  FLSFK HKY+E LE F+ L + Q PKFMVIACADSRVCPS ILGF+PGEAFM+RNVAN+VP  + GPSETNAALEFAV +L+VENILIIGHSCCGGI+ LMSMQD  D SSFI++WV  GKNAKL+T++AA++LSFDQQC  CEKESIN SL+NLLTYPWI+EKVKK  L +HGGYYDF++CTFEKWTLD+KG   E K R  VK+Q  WC
Sbjct:   38 RLWTC---FRSNSGVKLKA-SAEPPALTREPKSDKQESIMEMG------NGCDLFNEMKNNFLSFKKHKYMENLELFQALSKGQAPKFMVIACADSRVCPSNILGFKPGEAFMVRNVANMVPTYESGPSETNAALEFAVNSLEVENILIIGHSCCGGIRALMSMQDEVDSSSFIRSWVIVGKNAKLSTKAAASNLSFDQQCTHCEKESINCSLLNLLTYPWIEEKVKKGELSLHGGYYDFVDCTFEKWTLDYKGSVMEGKNRVVVKNQSFWC 299
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy TrEMBL
Match: V7B641_PHAVU (Carbonic anhydrase OS=Phaseolus vulgaris GN=PHAVU_008G181400g PE=3 SV=1)

HSP 1 Score: 345.895 bits (886), Expect = 1.547e-113
Identity = 180/327 (55.05%), Postives = 229/327 (70.03%), Query Frame = 3 
Query:  135 MAWLIRFKARSLVSATRSLRDTLDSYRCSLSHFSGFTTDDSVRSFPRKWLCSKAMRLNDVDDIQSRSSSSPDI----TRRPSVSASSNSLGVGLQE----VTGSKLNLFDELKLRFLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGPSETNAALEFAVKTLQVENILIIGHSCCGGIQTLMSMQDNSDS-SFIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDFLNCTFEKWTLDFKGGSDEEKG-RFFVKDQQLWC 1085
            M W IR +A SL+ A   L  +        S FSG T     R++P      K M L  +D  ++ ++S P I    T  PS     +    GL E     T    NLF  +K RF+SFK+ KY++ELEHF+ L E Q+PKFMVIACADSRVCPS ILGF+PGEAFMIRN+ANLVPP++ GPSE NAAL+FAV TLQVENIL+IGHS C GI+TLM+MQD+++S +FI  WV NG+ AKL T +A  HLSFDQQCR+CEKESIN SL+NLL+YPWI+++V++E+L +HGGYY+F NC+FEKWTLDFK  + +E+G  + VK+Q  WC
Sbjct:    1 MVWSIRSRASSLLCANAPLVASHVYESWWFSRFSGLTGSSLTRAWP------KFMDLIQIDRCRA-AASLPSIKEKQTEGPSYCVRLDRENKGLDEGNMAETDGYQNLFGLMKQRFMSFKNQKYIKELEHFQGLAEVQSPKFMVIACADSRVCPSNILGFQPGEAFMIRNIANLVPPMKNGPSECNAALQFAVTTLQVENILVIGHSSCAGIETLMNMQDDAESRNFIHKWVGNGELAKLKTTAATAHLSFDQQCRVCEKESINQSLLNLLSYPWIEDRVRRELLSLHGGYYNFSNCSFEKWTLDFKRCNVKEEGSSYAVKEQDFWC 320
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy Swiss-Prot
Match: CAHC_SPIOL (Carbonic anhydrase, chloroplastic OS=Spinacia oleracea PE=1 SV=2)

HSP 1 Score: 197.593 bits (501), Expect = 5.830e-58
Identity = 94/197 (47.72%), Postives = 133/197 (67.51%), Query Frame = 3 
Query:  444 LKLRFLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGP-SETNAALEFAVKTLQVENILIIGHSCCGGIQTLMSMQDNSDSS--FIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDFLNCTFEKWTLDF 1025
            +K  F+ FK  KY +    +  L + Q PKFMV AC+DSRVCPS +L F+PGEAFM+RN+AN+VP   K   +   AA+E+AV  L+VENI++IGHS CGGI+ LMS  D   ++  FI+ WV     AK    +   + +F +QC  CEKE++N+SL NLLTYP++++ + K+ L + GGYYDF+N +FE W L++
Sbjct:  115 IKEGFIKFKKEKYEKNPALYGELSKGQAPKFMVFACSDSRVCPSHVLDFQPGEAFMVRNIANMVPVFDKDKYAGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPDAGPTTTDFIEDWVKICLPAKHKVLAEHGNATFAEQCTHCEKEAVNVSLGNLLTYPFVRDGLVKKTLALQGGYYDFVNGSFELWGLEY 311
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy Swiss-Prot
Match: BCA1_ARATH (Beta carbonic anhydrase 1, chloroplastic OS=Arabidopsis thaliana GN=BCA1 PE=1 SV=2)

HSP 1 Score: 197.593 bits (501), Expect = 1.219e-57
Identity = 100/224 (44.64%), Postives = 139/224 (62.05%), Query Frame = 3 
Query:  372 SASSNSLGVGLQEVTGSKLNLFDE---LKLRFLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGP-SETNAALEFAVKTLQVENILIIGHSCCGGIQTLMS--MQDNSDSSFIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDFLNCTFEKWTLDF 1025
            +A    +   LQ  T S    FD    +K  F+ FK  KY      +  L + Q+PK+MV AC+DSRVCPS +L F+PG+AF++RN+AN+VPP  K       AA+E+AV  L+VENI++IGHS CGGI+ LMS  +  N+ + FI+ WV     AK    S     +F+ QC  CE+E++N+SL NLLTYP+++E + K  L + GGYYDF+   FE W L+F
Sbjct:  105 AAKVEQITAALQTGTSSDKKAFDPVETIKQGFIKFKKEKYETNPALYGELAKGQSPKYMVFACSDSRVCPSHVLDFQPGDAFVVRNIANMVPPFDKVKYGGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPLDGNNSTDFIEDWVKICLPAKSKVISELGDSAFEDQCGRCEREAVNVSLANLLTYPFVREGLVKGTLALKGGYYDFVKGAFELWGLEF 328
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy Swiss-Prot
Match: CAH2_FLALI (Carbonic anhydrase 2 (Fragment) OS=Flaveria linearis PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 6.023e-57
Identity = 90/178 (50.56%), Postives = 125/178 (70.22%), Query Frame = 3 
Query:  501 FETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQK-GPSETNAALEFAVKTLQVENILIIGHSCCGGIQTLMSMQDNSD--SSFIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDFLNCTFEKWTLDF 1025
            +  L + Q+PKF+V AC+DSRVCPS IL F+PGEAF++RN+AN+VPP      S   AA+E+AV  L+VENI++IGHSCCGGI+ LMS+ D+    S FI+ WV  G  AK   ++  N+L F   C  CEKE++N+SL NLLTYP++++ +  + L + G +YDF+N  F+ W LDF
Sbjct:    5 YGELAKGQSPKFLVFACSDSRVCPSHILDFQPGEAFVVRNIANMVPPYDTIKHSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDDGTPASDFIEQWVKLGLPAKSKVKANCNNLEFADLCTKCEKEAVNVSLGNLLTYPFVRDALVNKKLSLKGAHYDFVNGAFDLWNLDF 182
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy Swiss-Prot
Match: CAHC_HORVU (Carbonic anhydrase, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 6.503e-57
Identity = 95/195 (48.72%), Postives = 129/195 (66.15%), Query Frame = 3 
Query:  438 DELKLRFLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGP-SETNAALEFAVKTLQVENILIIGHSCCGGIQTLMSMQDNSDSS--FIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDFLNCTFEKW 1013
            + LK  F  FK   Y ++ + FE LK  Q PK+MV ACADSRVCPS  LG  PGEAF IRN+AN+VP   K   +   +A+E+AV  L+VE I++IGHS CGGI+ L+S++D +D S  F++ WV  G  AK   ++    + FD QC + EKE++N+SL NLLTYP++KE V    L + GG+YDF++  FE W
Sbjct:  128 ERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANMVPAYCKNKYAGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDWVRIGFPAKKKVQTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFETW 322
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy Swiss-Prot
Match: CAHC_PEA (Carbonic anhydrase, chloroplastic OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 1.197e-56
Identity = 96/199 (48.24%), Postives = 132/199 (66.33%), Query Frame = 3 
Query:  438 DELKLRFLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPL-QKGPSETNAALEFAVKTLQVENILIIGHSCCGGIQTLMSMQ-DNSDSS-FIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDFLNCTFEKWTLDF 1025
            + +K  FL FK  KY +    +  L + Q+P FMV AC+DSRVCPS +L F+PGEAF++RNVANLVPP  Q   + T AA+E+AV  L+V NI++IGHS CGGI+ L+S   D + S+ FI+ WV  G  AK   ++      F + C  CEKE++N SL NLLTYP+++E +  + L + GGYYDF+  +FE W L+F
Sbjct:  122 ERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANLVPPYDQAKYAGTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGTYSTDFIEEWVKIGLPAKAKVKAQHGDAPFAELCTHCEKEAVNASLGNLLTYPFVREGLVNKTLALKGGYYDFVKGSFELWGLEF 320
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy Swiss-Prot
Match: CYNT_PSEAE (Carbonic anhydrase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=cynT PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.603e-25
Identity = 57/178 (32.02%), Postives = 90/178 (50.56%), Query Frame = 3 
Query:  456 FLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGPSETNAALEFAVKTLQVENILIIGHSCCGGIQTLMSMQDNSDSSFIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDF 989
            FL F+   Y    + F++L   Q PK + IAC+DSRV P  +    PGE F+IRN  N+VP     P   +A++E+AV  L V +I++ GHS CG +  + S         +  W+ + + A+    SA  H S   +     + ++   L NL T+P +   +++  L +HG  YD 
Sbjct:    8 FLRFQRDAYPARSQLFKSLATRQAPKALFIACSDSRVVPELLTQREPGELFVIRNAGNIVPGYGPQPGGVSASVEYAVAVLGVGDIVVCGHSDCGAMGAIASCACLDQLPAVAGWLHHAEAAR-AMNSAHEHASEAARLDALVRHNVIAQLANLRTHPCVARALEQGRLNLHGWVYDI 184
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy Swiss-Prot
Match: CYNT_ECOLI (Carbonic anhydrase 1 OS=Escherichia coli (strain K12) GN=cynT PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 4.048e-25
Identity = 53/178 (29.78%), Postives = 93/178 (52.25%), Query Frame = 3 
Query:  456 FLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGPSETNAALEFAVKTLQVENILIIGHSCCGGIQTLMSMQDNSDSSFIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDF 989
            FL F+   + +    F+ L   Q+P+ + I+C+DSR+ P  +    PG+ F+IRN  N+VP     P   +A++E+AV  L+V +I+I GHS CG +  + S Q       +  W+    +A++  E A  H     +     +E++   L NL T+P ++  +++  + +HG  YD 
Sbjct:    8 FLKFQREAFPKREALFKQLATQQSPRTLFISCSDSRLVPELVTQREPGDLFVIRNAGNIVPSYGPEPGGVSASVEYAVAALRVSDIVICGHSNCGAMTAIASCQCMDHMPAVSHWLRYADSARVVNE-ARPHSDLPSKAAAMVRENVIAQLANLQTHPSVRLALEEGRIALHGWVYDI 184
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy Swiss-Prot
Match: CYNT_ECO57 (Carbonic anhydrase 1 OS=Escherichia coli O157:H7 GN=cynT PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 4.048e-25
Identity = 53/178 (29.78%), Postives = 93/178 (52.25%), Query Frame = 3 
Query:  456 FLSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGPSETNAALEFAVKTLQVENILIIGHSCCGGIQTLMSMQDNSDSSFIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYDF 989
            FL F+   + +    F+ L   Q+P+ + I+C+DSR+ P  +    PG+ F+IRN  N+VP     P   +A++E+AV  L+V +I+I GHS CG +  + S Q       +  W+    +A++  E A  H     +     +E++   L NL T+P ++  +++  + +HG  YD 
Sbjct:    8 FLKFQREAFPKREALFKQLATQQSPRTLFISCSDSRLVPELVTQREPGDLFVIRNAGNIVPSYGPEPGGVSASVEYAVAALRVSDIVICGHSNCGAMTAIASCQCMDHMPAVSHWLRYADSARVVNE-ARPHSDLPSKAAAMVRENVIAQLANLQTHPSVRLALEEGRIALHGWVYDI 184
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy Swiss-Prot
Match: CYNT_HELPJ (Carbonic anhydrase OS=Helicobacter pylori (strain J99 / ATCC 700824) GN=cynT PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.008e-24
Identity = 62/184 (33.70%), Postives = 103/184 (55.98%), Query Frame = 3 
Query:  459 LSFKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPL--QKGPSETNAALEFAVKTLQVENILIIGHSCCGGIQTLMSMQDN---SDSSFIKTWVTNGKNAKLTTESAANHLSFD----QQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYY 983
            L F+ ++Y E  E +E+LK  Q P  + I+C DSRV P+ I G +PGE ++IRN+ N++PP    K    T A++E+A+  + V+N++I GHS CG   ++  + D    + + +I  W+   +  K   E   NH  F     ++  L E+ +  + L NLL+Y +I+E+V    L + G +Y
Sbjct:    8 LEFQENEYEEFKELYESLKTKQKPHTLFISCVDSRVVPNLITGTQPGELYVIRNMGNVIPPKTSYKESLSTIASVEYAIAHVGVQNLIICGHSDCGACGSIHLIHDETTKAKTPYIANWIQFLEPIK---EELKNHPQFSNHFAKRSWLTERLNARLQLNNLLSYDFIQERVINNELKIFGWHY 188
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy Swiss-Prot
Match: CYNT_SYNE7 (Carbonic anhydrase OS=Synechococcus elongatus (strain PCC 7942) GN=icfA PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.215e-21
Identity = 47/175 (26.86%), Postives = 87/175 (49.71%), Query Frame = 3 
Query:  465 FKHHKYLEELEHFETLKEAQTPKFMVIACADSRVCPSTILGFRPGEAFMIRNVANLVPPLQKGPSETNAALEFAVKTLQVENILIIGHSCCGGIQTLMSM-QDNSDSSFIKTWVTNGKNAKLTTESAANHLSFDQQCRLCEKESINMSLMNLLTYPWIKEKVKKEMLFVHGGYYD 986
            F+   Y    + FE   + Q P+ + I C+DSR+ P+ I     GE F+IRN  NL+PP         A++E+A+  L +E++++ GHS CG ++ L+ + Q   D   +  W+ + +  +       +    D    +   E++   + NL TYP ++ ++ +  L + G  Y+
Sbjct:   11 FRTSYYPSHRDLFEQFAKGQHPRVLFITCSDSRIDPNLITQSGMGELFVIRNAGNLIPPFGAANGGEGASIEYAIAALNIEHVVVCGHSHCGAMKGLLKLNQLQEDMPLVYDWLQHAQATRRLVLDNYSGYETDDLVEILVAENVLTQIENLKTYPIVRSRLFQGKLQIFGWIYE 185
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0B0MYI8_GOSAR0.000e+0100.00Carbonic anhydrase OS=Gossypium arboreum GN=F383_2... [more]
A0A0D2TU51_GOSRA0.000e+098.42Carbonic anhydrase OS=Gossypium raimondii GN=B456_... [more]
A0A0D2TPM0_GOSRA0.000e+099.24Carbonic anhydrase OS=Gossypium raimondii GN=B456_... [more]
A0A061FED8_THECC2.263e-17276.36Carbonic anhydrase OS=Theobroma cacao GN=TCM_03449... [more]
A0A0D2S6J6_GOSRA1.276e-12997.37Carbonic anhydrase OS=Gossypium raimondii GN=B456_... [more]
A0A067KZ65_JATCU3.232e-11956.44Uncharacterized protein OS=Jatropha curcas GN=JCGZ... [more]
B9H6V9_POPTR4.040e-11455.62Uncharacterized protein OS=Populus trichocarpa GN=... [more]
A0A061E8X3_THECC9.599e-11465.08Carbonic anhydrase OS=Theobroma cacao GN=TCM_00738... [more]
A0A061E269_THECC1.099e-11362.13Carbonic anhydrase OS=Theobroma cacao GN=TCM_00738... [more]
V7B641_PHAVU1.547e-11355.05Carbonic anhydrase OS=Phaseolus vulgaris GN=PHAVU_... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0011968 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
CAHC_SPIOL5.830e-5847.72Carbonic anhydrase, chloroplastic OS=Spinacia oler... [more]
BCA1_ARATH1.219e-5744.64Beta carbonic anhydrase 1, chloroplastic OS=Arabid... [more]
CAH2_FLALI6.023e-5750.56Carbonic anhydrase 2 (Fragment) OS=Flaveria linear... [more]
CAHC_HORVU6.503e-5748.72Carbonic anhydrase, chloroplastic OS=Hordeum vulga... [more]
CAHC_PEA1.197e-5648.24Carbonic anhydrase, chloroplastic OS=Pisum sativum... [more]
CYNT_PSEAE2.603e-2532.02Carbonic anhydrase OS=Pseudomonas aeruginosa (stra... [more]
CYNT_ECOLI4.048e-2529.78Carbonic anhydrase 1 OS=Escherichia coli (strain K... [more]
CYNT_ECO574.048e-2529.78Carbonic anhydrase 1 OS=Escherichia coli O157:H7 G... [more]
CYNT_HELPJ1.008e-2433.70Carbonic anhydrase OS=Helicobacter pylori (strain ... [more]
CYNT_SYNE75.215e-2126.86Carbonic anhydrase OS=Synechococcus elongatus (str... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001765Carbonic anhydraseSMARTSM00947Pro_CA_2coord: 127..294
e-value: 3.3E-42
score: 156.2
IPR001765Carbonic anhydraseGENE3D3.40.1050.10coord: 100..298
e-value: 2.0E-64
score: 216.4
IPR001765Carbonic anhydrasePFAMPF00484Pro_CAcoord: 135..285
e-value: 6.1E-41
score: 140.2
IPR001765Carbonic anhydrasePANTHERPTHR11002CARBONIC ANHYDRASEcoord: 47..309
IPR001765Carbonic anhydraseSUPERFAMILY53056beta-carbonic anhydrase, cabcoord: 95..298
NoneNo IPR availablePANTHERPTHR11002:SF12SUBFAMILY NOT NAMEDcoord: 47..309
IPR015892Carbonic anhydrase, prokaryotic-like, conserved sitePROSITEPS00705PROK_CO2_ANHYDRASE_2coord: 182..202
IPR015892Carbonic anhydrase, prokaryotic-like, conserved sitePROSITEPS00704PROK_CO2_ANHYDRASE_1coord: 139..146

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0011968 ID=g.arboreum_cottongen_reftransV1_0011968; Name=g.arboreum_cottongen_reftransV1_0011968; organism=Gossypium arboreum; type=contig; length=1141bp
AAATAAAATAAAATAAAAATACAAAAACCCCCAATCTGAAAACTTTACGT
GATGATATGGAGAACACGATCATGGAAACAGAGCTATAAAAGGAAATTCA
TTATTACGAAGCAAATGCAAAGGTGGGAAGAGAAATGGCCTGGTTGATCC
GCTTTAAAGCTCGATCGCTTGTATCAGCGACAAGGTCACTACGCGATACC
CTCGATTCTTATCGCTGCTCACTGTCTCATTTCTCTGGGTTTACTACCGA
TGACTCTGTTCGCAGTTTCCCGAGGAAATGGCTTTGTTCAAAAGCGATGA
GATTGAATGATGTGGACGACATACAATCAAGGTCATCGTCTTCACCGGAT
ATCACTAGGAGGCCCTCGGTTTCTGCTTCTAGCAATTCCCTAGGTGTAGG
ACTACAAGAAGTTACAGGCTCCAAATTGAACTTGTTTGACGAGTTGAAAC
TGAGGTTTCTGAGTTTTAAACATCACAAATATTTGGAAGAATTGGAGCAT
TTTGAAACACTTAAAGAAGCTCAAACACCCAAGTTTATGGTGATTGCTTG
TGCAGATTCCAGGGTGTGTCCTTCTACAATCCTTGGGTTTCGACCAGGGG
AAGCCTTCATGATTCGAAATGTAGCTAATCTTGTTCCTCCACTCCAGAAG
GGACCTTCAGAAACTAACGCTGCCCTTGAATTTGCAGTAAAAACTCTTCA
AGTTGAAAACATATTAATTATCGGTCACAGTTGCTGCGGAGGAATTCAGA
CCCTTATGAGCATGCAAGATAATAGTGACTCCAGTTTTATCAAAACTTGG
GTTACTAATGGGAAAAATGCAAAGTTAACAACAGAATCTGCCGCAAACCA
CCTTAGCTTCGATCAACAATGCCGTCTCTGTGAGAAAGAATCCATAAATA
TGTCGCTAATGAACTTGCTAACATATCCGTGGATAAAAGAGAAGGTGAAG
AAAGAGATGCTGTTTGTTCATGGAGGATACTATGATTTTCTCAACTGTAC
ATTTGAGAAGTGGACGCTTGATTTCAAGGGAGGCAGTGATGAAGAAAAGG
GAAGGTTCTTCGTCAAAGATCAACAACTTTGGTGCTGACTGATGCGTTCT
TGGCCATTTTATATATATATATATATATATATTTGAAACCT
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR001765Carbonic_anhydrase
IPR015892Carbonic_anhydrase_CS
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0004089carbonate dehydratase activity
Vocabulary: Biological Process
TermDefinition
GO:0015976carbon utilization