g.arboreum_cottongen_reftransV1_0012644, g.arboreum_cottongen_reftransV1_0012644 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0012644
Unique Nameg.arboreum_cottongen_reftransV1_0012644
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length465
Alignments
The following features are aligned
Feature Name Type LocationAnalysis
Chr8chromosomeg.arboreum_cottongen_reftransV1_0012644:1..465 .
Chr8:103563427..103563891 +
Homology
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0012644 vs. ExPASy TrEMBL
Match: W9SBT8_9ROSA (Histone H2B OS=Morus notabilis GN=L484_011774 PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 4.513e-46
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 2 
Query:  239 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELA 463
            SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELA
Sbjct:   55 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELA 129
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0012644 vs. ExPASy TrEMBL
Match: F4YF90_CAMSI (Histone H2B OS=Camellia sinensis PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 5.549e-46
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 2 
Query:  239 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELA 463
            SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELA
Sbjct:   47 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELA 121
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0012644 vs. ExPASy TrEMBL
Match: A0A068UKK4_COFCA (Histone H2B OS=Coffea canephora GN=GSCOC_T00028170001 PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 6.341e-46
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 2 
Query:  239 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELA 463
            SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELA
Sbjct:   57 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELA 131
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0012644 vs. ExPASy TrEMBL
Match: S8EFG8_9LAMI (Histone H2B (Fragment) OS=Genlisea aurea GN=M569_03437 PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 6.989e-46
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 2 
Query:  239 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELA 463
            SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELA
Sbjct:   57 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELA 131
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0012644 vs. ExPASy TrEMBL
Match: A0A0B2SXJ1_GLYSO (Histone H2B OS=Glycine soja GN=glysoja_025369 PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 7.331e-46
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 2 
Query:  239 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELA 463
            SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELA
Sbjct:   48 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELA 122
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0012644 vs. ExPASy TrEMBL
Match: F6GV41_VITVI (Histone H2B OS=Vitis vinifera GN=VIT_06s0004g04230 PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 7.501e-46
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 2 
Query:  239 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELA 463
            SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELA
Sbjct:   55 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELA 129
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0012644 vs. ExPASy TrEMBL
Match: A0A061FP74_THECC (Histone H2B OS=Theobroma cacao GN=TCM_043377 PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 7.567e-46
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 2 
Query:  239 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELA 463
            SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELA
Sbjct:   52 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELA 126
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0012644 vs. ExPASy TrEMBL
Match: Q9M3H6_CICAR (Histone H2B OS=Cicer arietinum PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 7.655e-46
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 2 
Query:  239 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELA 463
            SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELA
Sbjct:   48 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELA 122
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0012644 vs. ExPASy TrEMBL
Match: M1CM33_SOLTU (Histone H2B OS=Solanum tuberosum GN=PGSC0003DMG400027363 PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 9.068e-46
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 2 
Query:  239 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELA 463
            SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELA
Sbjct:   53 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELA 127
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0012644 vs. ExPASy TrEMBL
Match: A9PDD5_POPTR (Histone H2B OS=Populus trichocarpa GN=POPTR_0008s03050g PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 9.095e-46
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 2 
Query:  239 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELA 463
            SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELA
Sbjct:   52 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELA 126
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0012644 vs. ExPASy Swiss-Prot
Match: H2B7_ARATH (Histone H2B.7 OS=Arabidopsis thaliana GN=At3g46030 PE=1 SV=3)

HSP 1 Score: 151.369 bits (381), Expect = 3.326e-45
Identity = 72/75 (96.00%), Postives = 74/75 (98.67%), Query Frame = 2 
Query:  239 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELA 463
            SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA E+S+LARYNKKPTITSREIQTAVRLVLPGELA
Sbjct:   54 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREIQTAVRLVLPGELA 128
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0012644 vs. ExPASy Swiss-Prot
Match: H2B1_ORYSJ (Histone H2B.1 OS=Oryza sativa subsp. japonica GN=H2B1 PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 4.590e-45
Identity = 72/75 (96.00%), Postives = 74/75 (98.67%), Query Frame = 2 
Query:  239 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELA 463
            SVETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQEA+RLARYNKKPTITSREIQT+VRLVLPGELA
Sbjct:   61 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQEAARLARYNKKPTITSREIQTSVRLVLPGELA 135
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0012644 vs. ExPASy Swiss-Prot
Match: H2B1_ORYSI (Histone H2B.1 OS=Oryza sativa subsp. indica GN=OsI_010709 PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 4.590e-45
Identity = 72/75 (96.00%), Postives = 74/75 (98.67%), Query Frame = 2 
Query:  239 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELA 463
            SVETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQEA+RLARYNKKPTITSREIQT+VRLVLPGELA
Sbjct:   61 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQEAARLARYNKKPTITSREIQTSVRLVLPGELA 135
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0012644 vs. ExPASy Swiss-Prot
Match: H2B11_ORYSJ (Histone H2B.11 OS=Oryza sativa subsp. japonica GN=H2B.11 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 5.113e-45
Identity = 72/75 (96.00%), Postives = 74/75 (98.67%), Query Frame = 2 
Query:  239 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELA 463
            SVETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQEA+RLARYNKKPTITSREIQT+VRLVLPGELA
Sbjct:   48 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQEAARLARYNKKPTITSREIQTSVRLVLPGELA 122
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0012644 vs. ExPASy Swiss-Prot
Match: H2B11_ORYSI (Histone H2B.11 OS=Oryza sativa subsp. indica GN=H2B.11 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 5.113e-45
Identity = 72/75 (96.00%), Postives = 74/75 (98.67%), Query Frame = 2 
Query:  239 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELA 463
            SVETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQEA+RLARYNKKPTITSREIQT+VRLVLPGELA
Sbjct:   48 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQEAARLARYNKKPTITSREIQTSVRLVLPGELA 122
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0012644 vs. ExPASy Swiss-Prot
Match: H2B4_ARATH (Histone H2B.4 OS=Arabidopsis thaliana GN=At2g37470 PE=1 SV=3)

HSP 1 Score: 149.828 bits (377), Expect = 8.803e-45
Identity = 70/74 (94.59%), Postives = 73/74 (98.65%), Query Frame = 2 
Query:  242 VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELA 463
            VETYKIYIFKVLKQVHPD+GIS KAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSREIQTAVRLVLPGELA
Sbjct:   49 VETYKIYIFKVLKQVHPDVGISGKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELA 122
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0012644 vs. ExPASy Swiss-Prot
Match: H2B8_ARATH (Histone H2B.8 OS=Arabidopsis thaliana GN=At3g53650 PE=1 SV=3)

HSP 1 Score: 149.828 bits (377), Expect = 1.069e-44
Identity = 70/75 (93.33%), Postives = 74/75 (98.67%), Query Frame = 2 
Query:  239 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELA 463
            ++ETYKIYIFKVLKQVHPDIGIS KAMGIMNSFINDIFEKLAQE+SRLARYNKKPTITSREIQTAVRLVLPGEL+
Sbjct:   47 NIETYKIYIFKVLKQVHPDIGISGKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELS 121
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0012644 vs. ExPASy Swiss-Prot
Match: H2B1_SOLLC (Histone H2B.1 OS=Solanum lycopersicum GN=H2B-1 PE=2 SV=4)

HSP 1 Score: 148.673 bits (374), Expect = 2.976e-44
Identity = 71/74 (95.95%), Postives = 73/74 (98.65%), Query Frame = 2 
Query:  242 VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELA 463
            VETYKIYIFKVLKQVHPDIGISSK+MGIMNSFINDIFEKLAQE+SRLAR NKKPTITSREIQTAVRLVLPGELA
Sbjct:   52 VETYKIYIFKVLKQVHPDIGISSKSMGIMNSFINDIFEKLAQESSRLARINKKPTITSREIQTAVRLVLPGELA 125
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0012644 vs. ExPASy Swiss-Prot
Match: H2B10_ARATH (Histone H2B.10 OS=Arabidopsis thaliana GN=At5g22880 PE=1 SV=3)

HSP 1 Score: 148.673 bits (374), Expect = 3.353e-44
Identity = 71/75 (94.67%), Postives = 74/75 (98.67%), Query Frame = 2 
Query:  239 SVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELA 463
            +VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA E+S+LARYNKKPTITSREIQTAVRLVLPGELA
Sbjct:   54 NVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAGESSKLARYNKKPTITSREIQTAVRLVLPGELA 128
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0012644 vs. ExPASy Swiss-Prot
Match: H2B2_SOLLC (Histone H2B.2 OS=Solanum lycopersicum GN=H2B-2 PE=2 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 6.242e-44
Identity = 70/74 (94.59%), Postives = 73/74 (98.65%), Query Frame = 2 
Query:  242 VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELA 463
            +ETYKIYIFKVLKQVHPDIGISSK+MGIMNSFINDIFEKLAQE+SRLAR NKKPTITSREIQTAVRLVLPGELA
Sbjct:   50 IETYKIYIFKVLKQVHPDIGISSKSMGIMNSFINDIFEKLAQESSRLARINKKPTITSREIQTAVRLVLPGELA 123
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0012644 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
W9SBT8_9ROSA4.513e-46100.00Histone H2B OS=Morus notabilis GN=L484_011774 PE=3... [more]
F4YF90_CAMSI5.549e-46100.00Histone H2B OS=Camellia sinensis PE=2 SV=1[more]
A0A068UKK4_COFCA6.341e-46100.00Histone H2B OS=Coffea canephora GN=GSCOC_T00028170... [more]
S8EFG8_9LAMI6.989e-46100.00Histone H2B (Fragment) OS=Genlisea aurea GN=M569_0... [more]
A0A0B2SXJ1_GLYSO7.331e-46100.00Histone H2B OS=Glycine soja GN=glysoja_025369 PE=3... [more]
F6GV41_VITVI7.501e-46100.00Histone H2B OS=Vitis vinifera GN=VIT_06s0004g04230... [more]
A0A061FP74_THECC7.567e-46100.00Histone H2B OS=Theobroma cacao GN=TCM_043377 PE=3 ... [more]
Q9M3H6_CICAR7.655e-46100.00Histone H2B OS=Cicer arietinum PE=2 SV=1[more]
M1CM33_SOLTU9.068e-46100.00Histone H2B OS=Solanum tuberosum GN=PGSC0003DMG400... [more]
A9PDD5_POPTR9.095e-46100.00Histone H2B OS=Populus trichocarpa GN=POPTR_0008s0... [more]

Pages

back to top
BLAST of g.arboreum_cottongen_reftransV1_0012644 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
H2B7_ARATH3.326e-4596.00Histone H2B.7 OS=Arabidopsis thaliana GN=At3g46030... [more]
H2B1_ORYSJ4.590e-4596.00Histone H2B.1 OS=Oryza sativa subsp. japonica GN=H... [more]
H2B1_ORYSI4.590e-4596.00Histone H2B.1 OS=Oryza sativa subsp. indica GN=OsI... [more]
H2B11_ORYSJ5.113e-4596.00Histone H2B.11 OS=Oryza sativa subsp. japonica GN=... [more]
H2B11_ORYSI5.113e-4596.00Histone H2B.11 OS=Oryza sativa subsp. indica GN=H2... [more]
H2B4_ARATH8.803e-4594.59Histone H2B.4 OS=Arabidopsis thaliana GN=At2g37470... [more]
H2B8_ARATH1.069e-4493.33Histone H2B.8 OS=Arabidopsis thaliana GN=At3g53650... [more]
H2B1_SOLLC2.976e-4495.95Histone H2B.1 OS=Solanum lycopersicum GN=H2B-1 PE=... [more]
H2B10_ARATH3.353e-4494.67Histone H2B.10 OS=Arabidopsis thaliana GN=At5g2288... [more]
H2B2_SOLLC6.242e-4494.59Histone H2B.2 OS=Solanum lycopersicum GN=H2B-2 PE=... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000558Histone H2BPRINTSPR00621HISTONEH2Bcoord: 60..78
score: 80.55
coord: 101..118
score: 79.1
coord: 79..99
score: 75.74
coord: 118..130
score: 85.44
IPR000558Histone H2BSMARTSM00427h2b3coord: 50..130
e-value: 3.7E-50
score: 182.6
IPR000558Histone H2BPANTHERPTHR23428HISTONE H2Bcoord: 13..130
IPR009072Histone-foldGENE3D1.10.20.10coord: 30..130
e-value: 3.3E-47
score: 159.1
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 39..130
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 2..123
e-value: 3.6E-23
score: 82.3

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0012644 ID=g.arboreum_cottongen_reftransV1_0012644; Name=g.arboreum_cottongen_reftransV1_0012644; organism=Gossypium arboreum; type=contig; length=465bp
CACCGCTCCCCCGCCACAGCTACCAAAATTTCCCAAACTAACTTTTAAAG
CAAACAAATTTTACCTTTACTAAATGGCCCCCAAAGCTGAGAAAAAGCCA
GCCGAAAAGAAACCGGCGGAGGAGAAAAAGACCACCGTTGCCGAGAAATC
CCCGGCGGAGAAGAAACCGAAGGCCGGCAAGAAGCTTCCAAAAGAAGGCG
GTGCCGCCGCTGACAAGAAGAAGAAGAAGGCCAAGAAGAGTGTGGAGACT
TACAAGATCTACATCTTCAAGGTTCTTAAACAAGTTCACCCTGATATCGG
GATCTCAAGCAAAGCTATGGGGATAATGAACAGTTTCATTAACGATATCT
TTGAGAAACTTGCTCAAGAAGCTTCGAGGCTCGCGAGGTACAACAAGAAG
CCCACGATTACTTCAAGGGAAATTCAGACCGCTGTTAGGCTCGTTCTTCC
CGGTGAGCTTGCGAA
back to top
Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR000558Histone_H2B
IPR009072Histone-fold
IPR007125Histone_H2A/H2B/H3
Vocabulary: Cellular Component
TermDefinition
GO:0000786nucleosome
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0046982protein heterodimerization activity