g.arboreum_cottongen_reftransV1_0004217, g.arboreum_cottongen_reftransV1_0004217 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy TrEMBL
Match: F6HQ94_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0063g00180 PE=4 SV=1) HSP 1 Score: 417.542 bits (1072), Expect = 3.544e-141 Identity = 214/304 (70.39%), Postives = 261/304 (85.86%), Query Frame = 2 Query: 5 SAVSSPFQPRLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFSDT--GSSELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPEDSIGNSDDFACSEIVPF 910 S+ S+P RLSA++RL+GLARDSDKNRS+I SH+ +EVL+ ++FSD+ S+EL E+LA+LVMF L+ESEC + S P+RV +L +LFH+SIEVR+NSA+LIE V++GTRS DLRAQI N DEIFEG+ IL +YPRAL++G++ALFALCL KQ+RHKAV AGA LIDRLAD +KC+ ERALAT+ELLCR+P+GC AFAAHALTVPLLV+ ILK+SDRATEYAAGAL++LCS +E SQREAVSAGV+TQLLLLVQSDCTERAKRKAQ+LLKLLRDSWPEDS+ NSDDF CS++VPF Sbjct: 112 SSQSNPSHTRLSAVKRLRGLARDSDKNRSIIGSHNVQEVLLPVIFSDSECDSAELKHESLALLVMFPLSESECAFVASQPDRVAHLVSLLFHASIEVRVNSAALIEIVVAGTRSLDLRAQISNVDEIFEGITGILNYPLAYPRALKVGIKALFALCLAKQSRHKAVAAGAVTALIDRLADFEKCDVERALATVELLCRVPAGCAAFAAHALTVPLLVRKILKVSDRATEYAAGALLSLCSAAEQSQREAVSAGVVTQLLLLVQSDCTERAKRKAQLLLKLLRDSWPEDSVVNSDDFGCSDVVPF 415
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy TrEMBL
Match: I1JE03_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 415.231 bits (1066), Expect = 2.133e-140 Identity = 218/306 (71.24%), Postives = 267/306 (87.25%), Query Frame = 2 Query: 2 ASAVSSPFQPRLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFSDTGSSELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPEDSIG-NSDDFACSE--IVPF 910 AS+ S+P RLS++RRL+ LARDSDKNRS+I+SH+ R++L+ IVF++ GS EL E+LA+LVMF L ESEC S+ SD ++ YLSRML H+S +VR+NSA+LIE V++GT SP+LRA++ + DEI++GVVD+LR+ S+PRAL+IG++ALFALCLVK TR KAV AG PA+L+DRLAD +KC+AERALAT+ELLCRIP+GC AFA HALTVP+LVK ILKISDRATEYAAGAL++LCSESE QREAV+AGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWP+DSIG NSDDFACS+ +VPF Sbjct: 111 ASSGSAPAHLRLSSIRRLRQLARDSDKNRSLIASHNVRQILLPIVFNN-GSDELKNESLALLVMFPLGESECASLASDSVKIGYLSRMLTHNSFDVRVNSAALIEIVVAGTHSPELRAEVSSVDEIYDGVVDLLRSPISHPRALKIGIKALFALCLVKNTRQKAVDAGTPAVLVDRLADFEKCDAERALATVELLCRIPAGCEAFAGHALTVPMLVKIILKISDRATEYAAGALLSLCSESERCQREAVAAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPQDSIGNNSDDFACSQVVVVPF 415
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy TrEMBL
Match: A5B4U0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026443 PE=4 SV=1) HSP 1 Score: 417.157 bits (1071), Expect = 2.780e-140 Identity = 214/304 (70.39%), Postives = 261/304 (85.86%), Query Frame = 2 Query: 5 SAVSSPFQPRLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFSDT--GSSELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPEDSIGNSDDFACSEIVPF 910 S+ S+P RLSA++RL+GLARDSDKNRS+I SH+ +EVL+ ++FSD+ S+EL E+LA+LVMF L+ESEC + S P+RV +L +LFH+SIEVR+NSA+LIE V++GTRS DLRAQI N DEIFEG+ IL +YPRAL++G++ALFALCL KQ+RHKAV AGA LIDRLAD +KC+ ERALAT+ELLCR+P+GC AFAAHALTVPLLV+ ILK+SDRATEYAAGAL++LCS +E SQREAVSAGV+TQLLLLVQSDCTERAKRKAQ+LLKLLRDSWPEDS+ NSDDF CS++VPF Sbjct: 173 SSQSNPSHTRLSAVKRLRGLARDSDKNRSIIGSHNVQEVLLPVIFSDSECDSAELKHESLALLVMFPLSESECAFVASQPDRVAHLVSLLFHASIEVRVNSAALIEIVVAGTRSLDLRAQISNVDEIFEGITGILNYPLAYPRALKVGIKALFALCLAKQSRHKAVAAGAVTALIDRLADFEKCDVERALATVELLCRVPAGCAAFAAHALTVPLLVRKILKVSDRATEYAAGALLSLCSAAEQSQREAVSAGVVTQLLLLVQSDCTERAKRKAQLLLKLLRDSWPEDSVVNSDDFGCSDVVPF 476
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy TrEMBL
Match: A0A067EXD2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g014817mg PE=4 SV=1) HSP 1 Score: 411.764 bits (1057), Expect = 6.789e-139 Identity = 224/308 (72.73%), Postives = 263/308 (85.39%), Query Frame = 2 Query: 2 ASAVSSPFQPRLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFSDTG-----SSELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPEDSIGNSDDFACSEIVPF 910 AS+ S+ + RLSALRRL+GLARDSDKNRS+ISSH+ R +L + F++ S EL+ E+LA+LVMF L E+EC I SD +++ LS +LFHSSIEVR+NSA+LIE VL+G RS +LRAQI N DEIFEGV+DIL+NL+SYPR L++G++ALFALCLVKQTR+KAV AGA L+DRLAD DKC+AERALAT+ELLCRIP+GC FA HALTVPLLVKTILKISDRATEYAAGAL ALCS SE QR+AVSAGVLTQLLLLVQSDCT+RAKRKAQ+LLKLLRDSWP+DSIGNSDDFACSE+VPF Sbjct: 111 ASSESNTYGSRLSALRRLRGLARDSDKNRSLISSHNVRAILSQVFFTNINVKTASSPELAHESLALLVMFPLTETECMEIASDADKITSLSSLLFHSSIEVRVNSAALIEIVLAGMRSQELRAQISNLDEIFEGVIDILKNLSSYPRGLKVGIKALFALCLVKQTRYKAVAAGAAETLVDRLADFDKCDAERALATVELLCRIPAGCAEFAEHALTVPLLVKTILKISDRATEYAAGALAALCSASERCQRDAVSAGVLTQLLLLVQSDCTDRAKRKAQLLLKLLRDSWPQDSIGNSDDFACSEVVPF 418
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy TrEMBL
Match: V4SBN4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10028522mg PE=4 SV=1) HSP 1 Score: 410.609 bits (1054), Expect = 1.551e-138 Identity = 223/308 (72.40%), Postives = 262/308 (85.06%), Query Frame = 2 Query: 2 ASAVSSPFQPRLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFSDTG-----SSELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPEDSIGNSDDFACSEIVPF 910 AS+ S+ + R+SALRRL+GLARDSDKNR +ISSH+ R +L + F++ S EL+ E+LA+LVMF L E+EC I SD +++ LS +LFHSSIEVR+NSA+LIE VL+G RS +LRAQI N DEIFEGV+DIL+NL+SYPR L++G++ALFALCLVKQTRHKAV AGA L+DRLAD DKC+AERALAT+ELLCRIP+GC FA HALTVPLLVKTILKISDRATEYAAGAL ALCS SE QR+AVSAGVLTQLLLLVQSDCT+RAKRKAQ+LLKLLRDSWP+DSIGNSDDFACSE+VPF Sbjct: 111 ASSESNTYGSRMSALRRLRGLARDSDKNRCLISSHNVRAILSQVFFTNINVNTASSPELAHESLALLVMFPLTETECMEIASDADKITSLSSLLFHSSIEVRVNSAALIEIVLAGMRSQELRAQISNLDEIFEGVIDILKNLSSYPRGLKVGIKALFALCLVKQTRHKAVAAGAAETLVDRLADFDKCDAERALATVELLCRIPAGCAEFAEHALTVPLLVKTILKISDRATEYAAGALAALCSASERCQRDAVSAGVLTQLLLLVQSDCTDRAKRKAQLLLKLLRDSWPQDSIGNSDDFACSEVVPF 418
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy TrEMBL
Match: M1CFU1_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400025884 PE=4 SV=1) HSP 1 Score: 405.601 bits (1041), Expect = 1.382e-136 Identity = 216/305 (70.82%), Postives = 257/305 (84.26%), Query Frame = 2 Query: 2 ASAVSSPFQPRLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFS--DTGSSELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPEDSIGNSDDFACSEIVPF 910 A+A S+ R++ALRRL+GLARDSDKNRSVIS+++ARE+L+ IVFS D+ SSEL+ E+LA+L MF L+E EC + SDP RV YL MLFH SI+VR+NSA+LIE V++G RS +LRAQI NAD++FEGVV IL +YPRAL++G++ALFALCLVKQ R +AV AGA LIDRL D +KC+AERALATIELL RIPSGC A A+HALTVPLLVK ILKIS+RATEYAAGAL++LCS SE +Q+EAV+AGVL QLLLLVQSDCTERAKRKAQMLLK LRD WPEDSI NSDDFACS++VPF Sbjct: 111 AAAQSNHMNSRVAALRRLRGLARDSDKNRSVISANNAREILLAIVFSRMDSDSSELNHESLAILSMFPLSEPECVFVASDPERVSYLVAMLFHPSIDVRVNSAALIEIVVAGMRSSELRAQISNADDVFEGVVGILNYPLAYPRALKVGIKALFALCLVKQHRQRAVTAGAVEALIDRLQDFEKCDAERALATIELLSRIPSGCAALASHALTVPLLVKIILKISERATEYAAGALLSLCSASEQAQKEAVAAGVLIQLLLLVQSDCTERAKRKAQMLLKQLRDCWPEDSIANSDDFACSDVVPF 415
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy TrEMBL
Match: K4B314_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc01g107980.2 PE=4 SV=1) HSP 1 Score: 405.601 bits (1041), Expect = 1.645e-136 Identity = 213/305 (69.84%), Postives = 256/305 (83.93%), Query Frame = 2 Query: 2 ASAVSSPFQPRLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFS--DTGSSELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPEDSIGNSDDFACSEIVPF 910 A+A S+ R++ALRRL+GLARDS+KNRSVIS+++ARE+L+ IVFS D+ +SEL E+LA+L MF L+E EC + SDP RV YL MLFH SI+VR+NSA+LIE V++G RSP+ RAQI NAD++FEGVV IL +YPRAL++G++ALFALCLVKQ R +AV AGA LIDRL D +KC+AERALATIELL RIPSGC A A+HALTVPLLVK ILKIS+RATEYAAGAL++LCS SE +Q+EAV+AGVL QLLLLVQSDCTERAKRKAQMLLK LRD WPEDSI N+DDFACS++VPF Sbjct: 111 AAAQSNHMNSRVAALRRLRGLARDSEKNRSVISANNAREILLAIVFSRMDSDASELHHESLAILSMFPLSEPECVFVASDPGRVGYLVAMLFHPSIDVRVNSAALIETVVAGMRSPEFRAQISNADDVFEGVVGILNYPLAYPRALKVGIKALFALCLVKQHRQRAVSAGAVEALIDRLQDFEKCDAERALATIELLSRIPSGCAALASHALTVPLLVKIILKISERATEYAAGALLSLCSASEQAQKEAVAAGVLIQLLLLVQSDCTERAKRKAQMLLKQLRDCWPEDSIANTDDFACSDVVPF 415
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy TrEMBL
Match: V7C5W9_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G048200g PE=4 SV=1) HSP 1 Score: 404.831 bits (1039), Expect = 2.894e-136 Identity = 210/285 (73.68%), Postives = 252/285 (88.42%), Query Frame = 2 Query: 62 LARDSDKNRSVISSHDAREVLIDIVFSDTGSSELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPEDSIGNSDDFACSE--IVPF 910 LARDSDKNRS+ISSH+ R++L+ IVF G+SEL+ EALA+LV+F L ESEC ++ SD +V YLSR+L H+S++VR+NSA+LIE V++GT SP+LRA + DEI++GVVD+LR+ SYPRAL+IG++ALFALCLVKQTRHKAV AGAPA+L+DRLAD +KC+AERALAT+ELLCRIP+GC AFA HALTVP+LVK ILKIS RATEYAAGAL++LCSESE QREAV+AGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWP+D IGNSDDFACS+ +VPF Sbjct: 131 LARDSDKNRSLISSHNVRQILLPIVFH--GASELNHEALALLVLFPLGESECAALASDSEKVNYLSRLLSHNSLDVRVNSAALIEIVVAGTHSPELRACVSEVDEIYDGVVDLLRSPISYPRALKIGIKALFALCLVKQTRHKAVAAGAPAVLVDRLADFEKCDAERALATVELLCRIPAGCEAFAGHALTVPMLVKIILKISHRATEYAAGALLSLCSESERCQREAVTAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPQDCIGNSDDFACSQVVVVPF 413
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy TrEMBL
Match: I1KM13_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 400.208 bits (1027), Expect = 1.903e-134 Identity = 217/305 (71.15%), Postives = 268/305 (87.87%), Query Frame = 2 Query: 2 ASAVSSPFQPRLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFSDTGSSELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPEDSIGNSDDFACSE--IVPF 910 AS+ S+P RLS+LRRL+ LARDSDKNRS+I+SH+ ++L+ IVF++ GS ELS E+LA+LVMF L ESEC S+ SD ++ YLSRML H+S +VR+NSA+L+E V+ GT SP+LRA++ + DEI++GVVD+LR+ S+PRAL+IG++ALFALCLVK TR KAV AGAPA+L+DRLAD +KC+AERALAT+ELLCRIP+GC AFAAHALTVP+LVK ILKIS+RATEYAAGAL++LCSESE QREAV+AGVLTQLLLL+QSDCTERAKRKAQMLLKLLRDSWP+DS+GNSDDFACS+ +VPF Sbjct: 111 ASSDSAPAHLRLSSLRRLRQLARDSDKNRSLIASHNLLQILLPIVFNN-GSDELSHESLALLVMFPLGESECASLASDSMKIGYLSRMLAHNSFDVRVNSAALVEIVVVGTHSPELRAEVSSVDEIYDGVVDLLRSPISHPRALKIGIKALFALCLVKNTRQKAVAAGAPAVLVDRLADFEKCDAERALATVELLCRIPAGCAAFAAHALTVPMLVKIILKISNRATEYAAGALLSLCSESERCQREAVAAGVLTQLLLLMQSDCTERAKRKAQMLLKLLRDSWPQDSVGNSDDFACSQVVVVPF 414
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy TrEMBL
Match: S8DEF1_9LAMI (Uncharacterized protein OS=Genlisea aurea GN=M569_17045 PE=4 SV=1) HSP 1 Score: 394.045 bits (1011), Expect = 5.783e-132 Identity = 199/303 (65.68%), Postives = 249/303 (82.18%), Query Frame = 2 Query: 2 ASAVSSPFQPRLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFSDTGS--SELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPEDSIGNSDDFACSEIV 904 AS+ S R+SALRRL+GLARDS+KNRSVI++++ R+V I ++F+ GS SEL++E+L +L MF L E EC I SD +RV YL +LFHSSI+VR+NSA+++E ++G RSP+LRA+I + D +F G+V IL +YP AL+IG++ALFALCL KQ RH+AV AGA LIDRLA+ +KC+AERALAT+ELLCR+P GC AFA+HALTVPLLVK ILKISDRATEYAAGAL++LCS SE SQ EAV+AGVLTQL+LLVQSDCTERAKRKAQMLLKLLR+SWP +S+ NSDDFA S++V Sbjct: 111 ASSGSGNLLSRVSALRRLRGLARDSEKNRSVIAANNGRQVFISLLFAGVGSEPSELNLESLGILSMFSLLEQECLYIASDLDRVRYLVNLLFHSSIDVRVNSAAVVEVTVAGIRSPELRARISSLDGVFRGIVGILNYPLAYPHALKIGIKALFALCLAKQHRHRAVSAGAVESLIDRLAEFEKCDAERALATVELLCRVPDGCAAFASHALTVPLLVKIILKISDRATEYAAGALLSLCSASEQSQGEAVAAGVLTQLILLVQSDCTERAKRKAQMLLKLLRNSWPLESMCNSDDFAGSDVV 413
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy Swiss-Prot
Match: PUB10_ARATH (U-box domain-containing protein 10 OS=Arabidopsis thaliana GN=PUB10 PE=2 SV=1) HSP 1 Score: 65.0846 bits (157), Expect = 2.433e-10 Identity = 84/287 (29.27%), Postives = 133/287 (46.34%), Query Frame = 2 Query: 14 SSPFQPRLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFSDTGSSELSVEALAVLVMFQLNESECESI---GSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAER-ALATIELLCRIPSGCLAFAA--HALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQ--SDCTERAKRKAQMLLKLLRDS 850 S + R +A+ ++ L++ S NR +I+ A VL+ ++ SD G +E A+ ++ + E E I G+ V + +L S+E R N+A+ L D I A +VD+L+ R + ALF LC+ + + +AV+AG L+ L D +ER A + +L + S +A A A +P L+ + K R E AA L+ LC + +S G L ++ L++ D TERAKRKA LL+LLR S Sbjct: 352 SQSIEDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSD-GDTETQENAVTCILNLSIYEHNKELIMLAGA----VTSIVLVLRAGSMEARENAAA----TLFSLSLADENKIIIGASGAIMALVDLLQY--GSVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTD---SSSERMADEALTILSVLASNQVAKTAILRANAIPPLIDCLQKDQPRNRENAAAILLCLCKRD---TEKLISIGRLGAVVPLMELSRDGTERAKRKANSLLELLRKS 621
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy Swiss-Prot
Match: PUB11_ARATH (U-box domain-containing protein 11 OS=Arabidopsis thaliana GN=PUB11 PE=2 SV=2) HSP 1 Score: 63.1586 bits (152), Expect = 1.020e-9 Identity = 73/277 (26.35%), Postives = 128/277 (46.21%), Query Frame = 2 Query: 26 QPRLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFS-DTGSSELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCE-AERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQL--LLLVQSDCTERAKRKAQMLLKLLR 844 + R +A+ ++ L++ S NR +I+ A VL++++ S D + E ++ + L +++ N+ G+ V + ++L ++E R N+A+ L D I +VD+L N PR + ALF LC+ + +AV+AG L+ L+D + + AL + +L A A T+P L+ + R E AA L++LC + ++ G L + L+ + + TER KRKA LL+LLR Sbjct: 346 EDRRNAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLLTSEDVATQENAITCVLNLSIYENNKELIMFAGA----VTSIVQVLRAGTMEARENAAA----TLFSLSLADENKIIIGGSGAIPALVDLLEN--GTPRGKKDAATALFNLCIYHGNKGRAVRAGIVTALVKMLSDSTRHRMVDEALTILSVLANNQDAKSAI-VKANTLPALIGILQTDQTRNRENAAAILLSLCKR---DTEKLITIGRLGAVVPLMDLSKNGTERGKRKAISLLELLR 608
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy Swiss-Prot
Match: PUB21_ARATH (U-box domain-containing protein 21 OS=Arabidopsis thaliana GN=PUB21 PE=2 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 1.710e-9 Identity = 69/275 (25.09%), Postives = 133/275 (48.36%), Query Frame = 2 Query: 44 LRRLKGLARDSDKNRSVISSHDAREVLIDIVFSDTGSSELSV---EALAVLV-MFQLNESECESIGSDPN-RVVYLSRMLFHSSIEVRINSASLIENVLS--GTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVK-QTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEG-SQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLL 841 + ++K L +S+KNR ++ + VL D +G +L+ E L++L MF + + S + R V + +L + VR N+A +++ +LS TR + + + E +V ++R+ S + A++ + L K + + ++ G ++ ++ + D + E+ALA ++ +C G +AL +PLLVK I K+S+ AT + ++ L + +AV G ++LL++Q E K KA LLK++ Sbjct: 144 IEKIKKLGDESEKNRKCVNENSVGWVLCDCFDKFSGDEKLTFMLNEILSLLTWMFPIGLEGISKLASATSFRCV--AGLLKSTDDSVRQNAAFIMKEILSLDETRVHSFAVE----NGVAEALVKLIRDSVSSSSTKSSLI-AIYQMVLQKPEIASEFLEIGLVSITVEMIVDAENSVCEKALAVLDAICETEHGREEVRKNALVMPLLVKKIAKVSELATRSSMSMILKLWKTGNTVAVEDAVRLGAFQKVLLVLQVGYGEETKEKATELLKMM 411
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy Swiss-Prot
Match: PUB13_ARATH (U-box domain-containing protein 13 OS=Arabidopsis thaliana GN=PUB13 PE=1 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 3.252e-9 Identity = 78/282 (27.66%), Postives = 126/282 (44.68%), Query Frame = 2 Query: 8 AVSSPFQPRLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFS-DTGSSELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNL-----NSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLK 835 A +P R SA ++ LA+ + NR I+ A +L+ ++ + D+ E SV AL L + + N+ S G+ P V ++L S+E R N+A+ + + + +++ G + + L R + ALF LC+ + + KA++AG L L + + ALA + +L P G A + VP LV+ I S R E AA L+ LCS EA G++ L+ L + T+R KRKA LL+ Sbjct: 362 AYGNPEDQR-SAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTALLNLSICENNKGAIVSAGAIPGIV----QVLKKGSMEARENAAATL-----------FSLSVIDENKVTIGALGAIPPLVVLLNEGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGMVDEALAILAILSSHPEG-KAIIGSSDAVPSLVEFIRTGSPRNRENAAAVLVHLCSGDPQHLVEAQKLGLMGPLIDLA-GNGTDRGKRKAAQLLE 625
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy Swiss-Prot
Match: PUB20_ARATH (U-box domain-containing protein 20 OS=Arabidopsis thaliana GN=PUB20 PE=2 SV=1) HSP 1 Score: 56.9954 bits (136), Expect = 7.453e-8 Identity = 32/108 (29.63%), Postives = 56/108 (51.85%), Query Frame = 2 Query: 521 IDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQ-REAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLL 841 ++ L D + E+AL + ++C G + L +P+LVK ILKIS++ + +C +GS+ EA+ G +L++++Q C E K K LLK++ Sbjct: 299 VEMLVDSENSVCEKALTVLNVICETKEGREKVRRNKLVIPILVKKILKISEKKD--LVSVMWKVCKSGDGSEVEEALRLGAFKKLVVMLQVGCGEGTKEKVTELLKMM 404 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 15
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0004217 ID=g.arboreum_cottongen_reftransV1_0004217; Name=g.arboreum_cottongen_reftransV1_0004217; organism=Gossypium arboreum; type=contig; length=938bpback to top |