g.arboreum_cottongen_reftransV1_0004217, g.arboreum_cottongen_reftransV1_0004217 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0004217
Unique Nameg.arboreum_cottongen_reftransV1_0004217
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length938
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr8chromosomeg.arboreum_cottongen_reftransV1_0004217:1..938 .
Chr8:120629304..120630241 +
Homology
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BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy TrEMBL
Match: F6HQ94_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0063g00180 PE=4 SV=1)

HSP 1 Score: 417.542 bits (1072), Expect = 3.544e-141
Identity = 214/304 (70.39%), Postives = 261/304 (85.86%), Query Frame = 2 
Query:    5 SAVSSPFQPRLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFSDT--GSSELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPEDSIGNSDDFACSEIVPF 910
            S+ S+P   RLSA++RL+GLARDSDKNRS+I SH+ +EVL+ ++FSD+   S+EL  E+LA+LVMF L+ESEC  + S P+RV +L  +LFH+SIEVR+NSA+LIE V++GTRS DLRAQI N DEIFEG+  IL    +YPRAL++G++ALFALCL KQ+RHKAV AGA   LIDRLAD +KC+ ERALAT+ELLCR+P+GC AFAAHALTVPLLV+ ILK+SDRATEYAAGAL++LCS +E SQREAVSAGV+TQLLLLVQSDCTERAKRKAQ+LLKLLRDSWPEDS+ NSDDF CS++VPF
Sbjct:  112 SSQSNPSHTRLSAVKRLRGLARDSDKNRSIIGSHNVQEVLLPVIFSDSECDSAELKHESLALLVMFPLSESECAFVASQPDRVAHLVSLLFHASIEVRVNSAALIEIVVAGTRSLDLRAQISNVDEIFEGITGILNYPLAYPRALKVGIKALFALCLAKQSRHKAVAAGAVTALIDRLADFEKCDVERALATVELLCRVPAGCAAFAAHALTVPLLVRKILKVSDRATEYAAGALLSLCSAAEQSQREAVSAGVVTQLLLLVQSDCTERAKRKAQLLLKLLRDSWPEDSVVNSDDFGCSDVVPF 415
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BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy TrEMBL
Match: I1JE03_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 415.231 bits (1066), Expect = 2.133e-140
Identity = 218/306 (71.24%), Postives = 267/306 (87.25%), Query Frame = 2 
Query:    2 ASAVSSPFQPRLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFSDTGSSELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPEDSIG-NSDDFACSE--IVPF 910
            AS+ S+P   RLS++RRL+ LARDSDKNRS+I+SH+ R++L+ IVF++ GS EL  E+LA+LVMF L ESEC S+ SD  ++ YLSRML H+S +VR+NSA+LIE V++GT SP+LRA++ + DEI++GVVD+LR+  S+PRAL+IG++ALFALCLVK TR KAV AG PA+L+DRLAD +KC+AERALAT+ELLCRIP+GC AFA HALTVP+LVK ILKISDRATEYAAGAL++LCSESE  QREAV+AGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWP+DSIG NSDDFACS+  +VPF
Sbjct:  111 ASSGSAPAHLRLSSIRRLRQLARDSDKNRSLIASHNVRQILLPIVFNN-GSDELKNESLALLVMFPLGESECASLASDSVKIGYLSRMLTHNSFDVRVNSAALIEIVVAGTHSPELRAEVSSVDEIYDGVVDLLRSPISHPRALKIGIKALFALCLVKNTRQKAVDAGTPAVLVDRLADFEKCDAERALATVELLCRIPAGCEAFAGHALTVPMLVKIILKISDRATEYAAGALLSLCSESERCQREAVAAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPQDSIGNNSDDFACSQVVVVPF 415
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BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy TrEMBL
Match: A5B4U0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026443 PE=4 SV=1)

HSP 1 Score: 417.157 bits (1071), Expect = 2.780e-140
Identity = 214/304 (70.39%), Postives = 261/304 (85.86%), Query Frame = 2 
Query:    5 SAVSSPFQPRLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFSDT--GSSELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPEDSIGNSDDFACSEIVPF 910
            S+ S+P   RLSA++RL+GLARDSDKNRS+I SH+ +EVL+ ++FSD+   S+EL  E+LA+LVMF L+ESEC  + S P+RV +L  +LFH+SIEVR+NSA+LIE V++GTRS DLRAQI N DEIFEG+  IL    +YPRAL++G++ALFALCL KQ+RHKAV AGA   LIDRLAD +KC+ ERALAT+ELLCR+P+GC AFAAHALTVPLLV+ ILK+SDRATEYAAGAL++LCS +E SQREAVSAGV+TQLLLLVQSDCTERAKRKAQ+LLKLLRDSWPEDS+ NSDDF CS++VPF
Sbjct:  173 SSQSNPSHTRLSAVKRLRGLARDSDKNRSIIGSHNVQEVLLPVIFSDSECDSAELKHESLALLVMFPLSESECAFVASQPDRVAHLVSLLFHASIEVRVNSAALIEIVVAGTRSLDLRAQISNVDEIFEGITGILNYPLAYPRALKVGIKALFALCLAKQSRHKAVAAGAVTALIDRLADFEKCDVERALATVELLCRVPAGCAAFAAHALTVPLLVRKILKVSDRATEYAAGALLSLCSAAEQSQREAVSAGVVTQLLLLVQSDCTERAKRKAQLLLKLLRDSWPEDSVVNSDDFGCSDVVPF 476
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BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy TrEMBL
Match: A0A067EXD2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g014817mg PE=4 SV=1)

HSP 1 Score: 411.764 bits (1057), Expect = 6.789e-139
Identity = 224/308 (72.73%), Postives = 263/308 (85.39%), Query Frame = 2 
Query:    2 ASAVSSPFQPRLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFSDTG-----SSELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPEDSIGNSDDFACSEIVPF 910
            AS+ S+ +  RLSALRRL+GLARDSDKNRS+ISSH+ R +L  + F++       S EL+ E+LA+LVMF L E+EC  I SD +++  LS +LFHSSIEVR+NSA+LIE VL+G RS +LRAQI N DEIFEGV+DIL+NL+SYPR L++G++ALFALCLVKQTR+KAV AGA   L+DRLAD DKC+AERALAT+ELLCRIP+GC  FA HALTVPLLVKTILKISDRATEYAAGAL ALCS SE  QR+AVSAGVLTQLLLLVQSDCT+RAKRKAQ+LLKLLRDSWP+DSIGNSDDFACSE+VPF
Sbjct:  111 ASSESNTYGSRLSALRRLRGLARDSDKNRSLISSHNVRAILSQVFFTNINVKTASSPELAHESLALLVMFPLTETECMEIASDADKITSLSSLLFHSSIEVRVNSAALIEIVLAGMRSQELRAQISNLDEIFEGVIDILKNLSSYPRGLKVGIKALFALCLVKQTRYKAVAAGAAETLVDRLADFDKCDAERALATVELLCRIPAGCAEFAEHALTVPLLVKTILKISDRATEYAAGALAALCSASERCQRDAVSAGVLTQLLLLVQSDCTDRAKRKAQLLLKLLRDSWPQDSIGNSDDFACSEVVPF 418
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BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy TrEMBL
Match: V4SBN4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10028522mg PE=4 SV=1)

HSP 1 Score: 410.609 bits (1054), Expect = 1.551e-138
Identity = 223/308 (72.40%), Postives = 262/308 (85.06%), Query Frame = 2 
Query:    2 ASAVSSPFQPRLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFSDTG-----SSELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPEDSIGNSDDFACSEIVPF 910
            AS+ S+ +  R+SALRRL+GLARDSDKNR +ISSH+ R +L  + F++       S EL+ E+LA+LVMF L E+EC  I SD +++  LS +LFHSSIEVR+NSA+LIE VL+G RS +LRAQI N DEIFEGV+DIL+NL+SYPR L++G++ALFALCLVKQTRHKAV AGA   L+DRLAD DKC+AERALAT+ELLCRIP+GC  FA HALTVPLLVKTILKISDRATEYAAGAL ALCS SE  QR+AVSAGVLTQLLLLVQSDCT+RAKRKAQ+LLKLLRDSWP+DSIGNSDDFACSE+VPF
Sbjct:  111 ASSESNTYGSRMSALRRLRGLARDSDKNRCLISSHNVRAILSQVFFTNINVNTASSPELAHESLALLVMFPLTETECMEIASDADKITSLSSLLFHSSIEVRVNSAALIEIVLAGMRSQELRAQISNLDEIFEGVIDILKNLSSYPRGLKVGIKALFALCLVKQTRHKAVAAGAAETLVDRLADFDKCDAERALATVELLCRIPAGCAEFAEHALTVPLLVKTILKISDRATEYAAGALAALCSASERCQRDAVSAGVLTQLLLLVQSDCTDRAKRKAQLLLKLLRDSWPQDSIGNSDDFACSEVVPF 418
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BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy TrEMBL
Match: M1CFU1_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400025884 PE=4 SV=1)

HSP 1 Score: 405.601 bits (1041), Expect = 1.382e-136
Identity = 216/305 (70.82%), Postives = 257/305 (84.26%), Query Frame = 2 
Query:    2 ASAVSSPFQPRLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFS--DTGSSELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPEDSIGNSDDFACSEIVPF 910
            A+A S+    R++ALRRL+GLARDSDKNRSVIS+++ARE+L+ IVFS  D+ SSEL+ E+LA+L MF L+E EC  + SDP RV YL  MLFH SI+VR+NSA+LIE V++G RS +LRAQI NAD++FEGVV IL    +YPRAL++G++ALFALCLVKQ R +AV AGA   LIDRL D +KC+AERALATIELL RIPSGC A A+HALTVPLLVK ILKIS+RATEYAAGAL++LCS SE +Q+EAV+AGVL QLLLLVQSDCTERAKRKAQMLLK LRD WPEDSI NSDDFACS++VPF
Sbjct:  111 AAAQSNHMNSRVAALRRLRGLARDSDKNRSVISANNAREILLAIVFSRMDSDSSELNHESLAILSMFPLSEPECVFVASDPERVSYLVAMLFHPSIDVRVNSAALIEIVVAGMRSSELRAQISNADDVFEGVVGILNYPLAYPRALKVGIKALFALCLVKQHRQRAVTAGAVEALIDRLQDFEKCDAERALATIELLSRIPSGCAALASHALTVPLLVKIILKISERATEYAAGALLSLCSASEQAQKEAVAAGVLIQLLLLVQSDCTERAKRKAQMLLKQLRDCWPEDSIANSDDFACSDVVPF 415
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BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy TrEMBL
Match: K4B314_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc01g107980.2 PE=4 SV=1)

HSP 1 Score: 405.601 bits (1041), Expect = 1.645e-136
Identity = 213/305 (69.84%), Postives = 256/305 (83.93%), Query Frame = 2 
Query:    2 ASAVSSPFQPRLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFS--DTGSSELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPEDSIGNSDDFACSEIVPF 910
            A+A S+    R++ALRRL+GLARDS+KNRSVIS+++ARE+L+ IVFS  D+ +SEL  E+LA+L MF L+E EC  + SDP RV YL  MLFH SI+VR+NSA+LIE V++G RSP+ RAQI NAD++FEGVV IL    +YPRAL++G++ALFALCLVKQ R +AV AGA   LIDRL D +KC+AERALATIELL RIPSGC A A+HALTVPLLVK ILKIS+RATEYAAGAL++LCS SE +Q+EAV+AGVL QLLLLVQSDCTERAKRKAQMLLK LRD WPEDSI N+DDFACS++VPF
Sbjct:  111 AAAQSNHMNSRVAALRRLRGLARDSEKNRSVISANNAREILLAIVFSRMDSDASELHHESLAILSMFPLSEPECVFVASDPGRVGYLVAMLFHPSIDVRVNSAALIETVVAGMRSPEFRAQISNADDVFEGVVGILNYPLAYPRALKVGIKALFALCLVKQHRQRAVSAGAVEALIDRLQDFEKCDAERALATIELLSRIPSGCAALASHALTVPLLVKIILKISERATEYAAGALLSLCSASEQAQKEAVAAGVLIQLLLLVQSDCTERAKRKAQMLLKQLRDCWPEDSIANTDDFACSDVVPF 415
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BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy TrEMBL
Match: V7C5W9_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G048200g PE=4 SV=1)

HSP 1 Score: 404.831 bits (1039), Expect = 2.894e-136
Identity = 210/285 (73.68%), Postives = 252/285 (88.42%), Query Frame = 2 
Query:   62 LARDSDKNRSVISSHDAREVLIDIVFSDTGSSELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPEDSIGNSDDFACSE--IVPF 910
            LARDSDKNRS+ISSH+ R++L+ IVF   G+SEL+ EALA+LV+F L ESEC ++ SD  +V YLSR+L H+S++VR+NSA+LIE V++GT SP+LRA +   DEI++GVVD+LR+  SYPRAL+IG++ALFALCLVKQTRHKAV AGAPA+L+DRLAD +KC+AERALAT+ELLCRIP+GC AFA HALTVP+LVK ILKIS RATEYAAGAL++LCSESE  QREAV+AGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWP+D IGNSDDFACS+  +VPF
Sbjct:  131 LARDSDKNRSLISSHNVRQILLPIVFH--GASELNHEALALLVLFPLGESECAALASDSEKVNYLSRLLSHNSLDVRVNSAALIEIVVAGTHSPELRACVSEVDEIYDGVVDLLRSPISYPRALKIGIKALFALCLVKQTRHKAVAAGAPAVLVDRLADFEKCDAERALATVELLCRIPAGCEAFAGHALTVPMLVKIILKISHRATEYAAGALLSLCSESERCQREAVTAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPQDCIGNSDDFACSQVVVVPF 413
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BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy TrEMBL
Match: I1KM13_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 400.208 bits (1027), Expect = 1.903e-134
Identity = 217/305 (71.15%), Postives = 268/305 (87.87%), Query Frame = 2 
Query:    2 ASAVSSPFQPRLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFSDTGSSELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPEDSIGNSDDFACSE--IVPF 910
            AS+ S+P   RLS+LRRL+ LARDSDKNRS+I+SH+  ++L+ IVF++ GS ELS E+LA+LVMF L ESEC S+ SD  ++ YLSRML H+S +VR+NSA+L+E V+ GT SP+LRA++ + DEI++GVVD+LR+  S+PRAL+IG++ALFALCLVK TR KAV AGAPA+L+DRLAD +KC+AERALAT+ELLCRIP+GC AFAAHALTVP+LVK ILKIS+RATEYAAGAL++LCSESE  QREAV+AGVLTQLLLL+QSDCTERAKRKAQMLLKLLRDSWP+DS+GNSDDFACS+  +VPF
Sbjct:  111 ASSDSAPAHLRLSSLRRLRQLARDSDKNRSLIASHNLLQILLPIVFNN-GSDELSHESLALLVMFPLGESECASLASDSMKIGYLSRMLAHNSFDVRVNSAALVEIVVVGTHSPELRAEVSSVDEIYDGVVDLLRSPISHPRALKIGIKALFALCLVKNTRQKAVAAGAPAVLVDRLADFEKCDAERALATVELLCRIPAGCAAFAAHALTVPMLVKIILKISNRATEYAAGALLSLCSESERCQREAVAAGVLTQLLLLMQSDCTERAKRKAQMLLKLLRDSWPQDSVGNSDDFACSQVVVVPF 414
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BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy TrEMBL
Match: S8DEF1_9LAMI (Uncharacterized protein OS=Genlisea aurea GN=M569_17045 PE=4 SV=1)

HSP 1 Score: 394.045 bits (1011), Expect = 5.783e-132
Identity = 199/303 (65.68%), Postives = 249/303 (82.18%), Query Frame = 2 
Query:    2 ASAVSSPFQPRLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFSDTGS--SELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPEDSIGNSDDFACSEIV 904
            AS+ S     R+SALRRL+GLARDS+KNRSVI++++ R+V I ++F+  GS  SEL++E+L +L MF L E EC  I SD +RV YL  +LFHSSI+VR+NSA+++E  ++G RSP+LRA+I + D +F G+V IL    +YP AL+IG++ALFALCL KQ RH+AV AGA   LIDRLA+ +KC+AERALAT+ELLCR+P GC AFA+HALTVPLLVK ILKISDRATEYAAGAL++LCS SE SQ EAV+AGVLTQL+LLVQSDCTERAKRKAQMLLKLLR+SWP +S+ NSDDFA S++V
Sbjct:  111 ASSGSGNLLSRVSALRRLRGLARDSEKNRSVIAANNGRQVFISLLFAGVGSEPSELNLESLGILSMFSLLEQECLYIASDLDRVRYLVNLLFHSSIDVRVNSAAVVEVTVAGIRSPELRARISSLDGVFRGIVGILNYPLAYPHALKIGIKALFALCLAKQHRHRAVSAGAVESLIDRLAEFEKCDAERALATVELLCRVPDGCAAFASHALTVPLLVKIILKISDRATEYAAGALLSLCSASEQSQGEAVAAGVLTQLILLVQSDCTERAKRKAQMLLKLLRNSWPLESMCNSDDFAGSDVV 413
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BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy Swiss-Prot
Match: PUB26_ARATH (U-box domain-containing protein 26 OS=Arabidopsis thaliana GN=PUB26 PE=2 SV=1)

HSP 1 Score: 361.688 bits (927), Expect = 3.469e-121
Identity = 187/298 (62.75%), Postives = 245/298 (82.21%), Query Frame = 2 
Query:   32 RLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFSDTGSSELSVEAL----AVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLA-DLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPEDSIGNSDDFACSEIVPF 910
            R +A+RRL+GLARDS+KNR +I+ H+ARE+L+ I+F+D  ++ LS E +    A+LV+  + E+ECE++ SDP+RV +++R+LF SSIE+R+N+A+LIE VL+G +S DL+  I  +D IFEGV+D+L+N  S  RAL+IG++A+FALCLVKQTRH A+ AGAP +LIDRLA D D+C+ ER LAT+ELLCR+P GC AF  HALTVPL+VKTIL++SDRATEYAAGAL+ALC+  E  + EA +AG++TQLLLLVQSDCTERAKRKAQMLLKLLRDSWP+DS  +SDDF  SE+ PF
Sbjct:  124 RAAAIRRLRGLARDSEKNRVLIAGHNAREILVRILFADIETTSLSSELVSESLALLVLLHMTETECEAVASDPSRVGFMTRLLFDSSIEIRVNAAALIEMVLTGAKSMDLKLIISGSDSIFEGVLDLLKNPISSRRALKIGIKAIFALCLVKQTRHLAISAGAPGILIDRLAADFDRCDTERGLATVELLCRLPEGCAAFGEHALTVPLMVKTILRVSDRATEYAAGALLALCTAEERCRDEAAAAGLVTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPDDSTVHSDDFNRSEVAPF 421
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BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy Swiss-Prot
Match: PUB25_ARATH (U-box domain-containing protein 25 OS=Arabidopsis thaliana GN=PUB25 PE=2 SV=1)

HSP 1 Score: 354.755 bits (909), Expect = 1.519e-118
Identity = 190/297 (63.97%), Postives = 239/297 (80.47%), Query Frame = 2 
Query:   32 RLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFSDTGSSELSVEALAVLVMFQLNE-SECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLA-DLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPE-DSIGNSDDFAC-SEIVPF 910
            R +ALRRL+G ARDSDKNR +I++H+A E+LI I+FS+T SSEL  E+LA+LVM  + E ++  SI SDP RV +L+R+LF SSIE R+N+A+LIE V +GT+S DL+  I N++ +FEGV+D+LRN  S  RAL+IG++ LFALC VK TRH A+ AGAP +LIDRLA D D+C+ ERALAT+ELLCR P GC AF  HALTVPLLVKTIL++SDRATEYAAGAL+ALC+  E  + EA  AGV+ QLLL+VQS+CTERAK+KAQ LLKLLRDSWP+ +S  NSDDF C S++VPF
Sbjct:  125 RAAALRRLRGFARDSDKNRVLIAAHNATEILIKILFSETTSSELVSESLALLVMLPITEPNQFVSISSDPGRVEFLTRLLFDSSIETRVNAAALIEIVSTGTKSADLKGSISNSESVFEGVLDLLRNPISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAADFDRCDTERALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAGALLALCTAEERWREEAAGAGVVVQLLLMVQSECTERAKKKAQKLLKLLRDSWPDYNSFANSDDFGCSSQVVPF 421
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy Swiss-Prot
Match: PUB23_ARATH (E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana GN=PUB23 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 4.787e-18
Identity = 75/290 (25.86%), Postives = 147/290 (50.69%), Query Frame = 2 
Query:   14 SSPFQPRLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFSDTGSSELSVEALAVLVMFQLNESECESIGSDPNR---VVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLAD----LDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMA---LCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSW 853
            +S  + ++  L+RL+ +  ++  N+  + +    E L +IV +D+ +  L+ EAL +L   + +E+  +++ ++      V  L++++     E R+ +  L++N+L      D    +    E+F  VV IL +  S  +A +  +  L  +C   + RHKAV+AG  +++I+ L D     ++   E A+  ++LLC+   G   F  H   + ++ K IL++S  A++ A   L++    C+ +     E +  GV+ +L L++Q  C  + K KA+ LLKL    W
Sbjct:  111 ASSHENQVKCLKRLRQIVSENATNKRCLEAAGVPEFLANIVSNDSENGSLTDEALNLLYHLETSETVLKNLLNNKKDNNIVKSLTKIMQRGMYESRVYATLLLKNILEVA---DPMQSMTLKPEVFTEVVQILDDRISQ-KATKAAMHILVNICPWGRNRHKAVEAGVISVIIELLMDESFTSERRGPEMAMVVLDLLCQCAEGRAEFLNHGAAIAVVCKKILRVSQTASDRAVRVLLSVGRFCA-TPALLHEMLQLGVVAKLCLVLQVSCGGKTKEKAKELLKLHARVW 395
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy Swiss-Prot
Match: PUB31_ARATH (U-box domain-containing protein 31 OS=Arabidopsis thaliana GN=PUB31 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.451e-17
Identity = 84/284 (29.58%), Postives = 143/284 (50.35%), Query Frame = 2 
Query:   35 LSALRRLKGLARD---SDKNRSVISSHDAREVLID--------IVFSDTGSSELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRA----LFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCS-ESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKL 838
            L  LR+ KG A+    S+  + V++   A++ ++D         + S   S  +  EA+A+LV  +L+ S+ ++    P RV  +  ML   SIE +IN A LI  ++        RA++ ++  +  G++ ++++     R  R GV      L ++ + KQ R+  V+ GA   L+D L  LD    E AL  ++ LC    G +A      T+P  V+ ++K+S++ T YA   L ++C   SE     AV  G+  +LLL++QS C    K+++  LLKL
Sbjct:  149 LGTLRKAKGKAKVHALSELKQVVMAHAIAKKTVVDEGGVFVISSLLSPFTSHAVGSEAIAILVNLELD-SDSKAGLMQPARVSLMVDMLNDGSIETKINCARLIGRLV---EEKGFRAELVSSHSLLVGLMRLVKD-----RRRRNGVSPALTLLKSVSVHKQVRNLLVRIGAVPQLVDVLPCLDVECLESALFVLDSLCLESEGRIALKDSVNTIPHTVRLLMKVSEKCTNYAISILWSVCKLASEECSSLAVEVGLAAKLLLVIQSGCDPALKQRSAELLKL 423
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy Swiss-Prot
Match: PUB30_ARATH (U-box domain-containing protein 30 OS=Arabidopsis thaliana GN=PUB30 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.978e-16
Identity = 84/283 (29.68%), Postives = 139/283 (49.12%), Query Frame = 2 
Query:   35 LSALRRLKGLARD---SDKNRSVISSHDAREVLID-----IVFSDTG---SSELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDIL---RNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCS-ESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKL 838
            L  L++ KG AR    S+  + VI+   AR+ +++     ++ S  G   S  +  E +A+LV   L+ S+ +S    P +V  +  ML   S E +IN A LI  ++        RA++ ++  +  G++ ++   R+ N    ALR+    L  + + KQ R   V  GA   L+D L  LD    E AL  ++ LC    G +A    A T+P  V+ ++++S+  T YA   L ++C    E     AV  G+  +LLL++QS C    K+++  LLKL
Sbjct:  153 LGTLKKAKGQARVHALSELKQIVIAHLMARKTVVEEGGVSVISSLLGPFTSHAVGSEVVAILVSLDLD-SDSKSGLMQPAKVSLIVDMLNDGSNETKINCARLIRGLV---EEKGFRAELVSSHSLLVGLMRLVKDKRHRNGVSPALRL----LKPISVHKQVRSLMVSIGAVPQLVDILPSLDPECLELALFVLDALCTDVEGRVAVKDSANTIPYTVRVLMRVSENCTNYALSILWSVCKLAPEECSPLAVEVGLAAKLLLVIQSGCDAALKQRSAELLKL 427
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy Swiss-Prot
Match: PUB22_ARATH (E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana GN=PUB22 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.129e-13
Identity = 54/170 (31.76%), Postives = 88/170 (51.76%), Query Frame = 2 
Query:  374 EIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAER-----ALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMA---LCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPE 859
            E+F  V+ IL +  S+ +A R  ++ L   C   + RHKAV+ G  +M+I+ L D D   +ER     A+  +++LC+   G   F  H   + ++ K IL++S   +E A   L++    C+     Q E +  GV+ +L L++Q  C  + K KA+ LLKL    W E
Sbjct:  255 ELFGEVIQILHDQISH-KATRSAMQILVITCPWGRNRHKAVEGGTISMIIELLMD-DTFSSERRNSEMAMVVLDMLCQCAEGRAEFLNHGAAIAVVSKKILRVSQITSERAVRVLLSVGRFCATPSLLQ-EMLQLGVVAKLCLVLQVSCGNKTKEKAKELLKLHARVWRE 421
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy Swiss-Prot
Match: PUB4_ARATH (U-box domain-containing protein 4 OS=Arabidopsis thaliana GN=PUB4 PE=1 SV=3)

HSP 1 Score: 72.7886 bits (177), Expect = 6.619e-13
Identity = 83/279 (29.75%), Postives = 137/279 (49.10%), Query Frame = 2 
Query:   14 SSPFQPRLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFS-DTGSSELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRD 847
            SS    +  A   L+ LA+ +  NR VI +  A  +L+++++S D+ + E    A+  L+   +N++  ++I +D   +  L  +L + S E + NSA+ +    S +   + + +I  +  I   +VD+L N    PR  +    ALF L + ++ +   VQ+GA   LID L D      ++A+A +  L  IP G  A       +PLLV+ +   S R  E AA AL+ L + S       +  G +  L+ L QS  T RA+ KAQ LL   R+
Sbjct:  552 SSSLDTQRQATAELRLLAKHNMDNRIVIGNSGAIVLLVELLYSTDSATQE---NAVTALLNLSINDNNKKAI-ADAGAIEPLIHVLENGSSEAKENSAATL---FSLSVIEENKIKIGQSGAIGP-LVDLLGN--GTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLID-LMDPAAGMVDKAVAVLANLATIPEGRNAIGQEG-GIPLLVEVVELGSARGKENAAAALLQLSTNSGRFCNMVLQEGAVPPLVALSQS-GTPRAREKAQALLSYFRN 817
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy Swiss-Prot
Match: PUB12_ORYSJ (U-box domain-containing protein 12 OS=Oryza sativa subsp. japonica GN=PUB12 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.472e-11
Identity = 81/275 (29.45%), Postives = 134/275 (48.73%), Query Frame = 2 
Query:   62 LARDSDKNRSVISSHDAREVLIDIVFS-DTGSSELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNL--NSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPEDSI-GN 874
            LA+ +  NR  I+   A  +L++++ S D  + E +V AL  L + + N++       D + +  +  +L   S+E R N+A+ +    S +   + +  I  A     G +  L NL  +  PR  +    A+F LC+ +  + +AV+AG    L++ L D      + AL+ + +L   P G +   A +  +P LV+ I   S R  E AA  L  LCS        A +AGV   L  L ++  T+RAKRKA  +L+L+  +  EDS+ GN
Sbjct:  350 LAKRNVNNRICIAEAGAIPLLVNLLSSSDPRTQEHAVTALLNLSIHENNKASI----VDSHAIPKIVEVLKTGSMETRENAAATL---FSLSVVDENKVTIGAA-----GAIPPLINLLCDGSPRGKKDAATAIFNLCIYQGNKVRAVKAGIVIHLMNFLVDPTGGMIDEALSLLSILAGNPEGKIVI-ARSEPIPPLVEVIKTGSPRNRENAAAILWLLCSADTEQTLAAKAAGVEDALKELSETG-TDRAKRKASSILELMHQA-NEDSLKGN 609
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy Swiss-Prot
Match: PUB2_ARATH (U-box domain-containing protein 2 OS=Arabidopsis thaliana GN=PUB2 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 6.803e-11
Identity = 76/278 (27.34%), Postives = 136/278 (48.92%), Query Frame = 2 
Query:   14 SSPFQPRLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFSDTGSSELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIE-VRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLR 844
            SS    +  A  R++ LAR+S  NR VI+  +A   L+ +++S      +  +A+  L+   +N++  +S+ ++   +V L  +L    +E  + NSA+    + S +   + + +I  A  I E +VD+L + +   +  +    ALF L +  + + K ++AGA   L++ L D      E+A+  +  L  +  G +A       +P+LV+ +   S R  E A  AL+ LC+ S       +  GV+  L+ L +S  T R K KAQ LLK  +
Sbjct:  432 SSSLDTQREATARIRILARNSTDNRIVIARCEAIPSLVSLLYST--DERIQADAVTCLLNLSINDNN-KSLIAESGAIVPLIHVLKTGYLEEAKANSAA---TLFSLSVIEEYKTEIGEAGAI-EPLVDLLGSGSLSGK--KDAATALFNLSIHHENKTKVIEAGAVRYLVE-LMDPAFGMVEKAVVVLANLATVREGKIAIGEEG-GIPVLVEVVELGSARGKENATAALLQLCTHSPKFCNNVIREGVIPPLVALTKSG-TARGKEKAQNLLKYFK 697
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy Swiss-Prot
Match: PUB12_ARATH (U-box domain-containing protein 12 OS=Arabidopsis thaliana GN=PUB12 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 9.354e-11
Identity = 75/279 (26.88%), Postives = 133/279 (47.67%), Query Frame = 2 
Query:   26 QP--RLSALRRLKGLARDSDKNRSVISSHDAREVLIDI--VFSDTGSSELSVEALAVLVMFQLNESE-CESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNL-----NSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLL 832
            QP  R SA   ++ LA+ ++ NR  I++  A  +L+++  + +D+ + E +V ++  L + Q N+ +   S G+ P  V  L +     S+E R N+A+ +               + + +++  G    +  L         R  +    ALF LC+ +  + KAV+AG   +L+  L + +    + +L+ + +L   P G     A A  VP+LV  I   S R  E +A  L+ LCS ++    EA   G++  LL+ +  + T+R KRKA  LL
Sbjct:  368 QPEDRRSAAGEIRLLAKQNNHNRVAIAASGAIPLLVNLLTISNDSRTQEHAVTSILNLSICQENKGKIVYSSGAVPGIVHVLQK----GSMEARENAAATL-----------FSLSVIDENKVTIGAAGAIPPLVTLLSEGSQRGKKDAATALFNLCIFQGNKGKAVRAGLVPVLMRLLTEPESGMVDESLSILAILSSHPDGKSEVGA-ADAVPVLVDFIRSGSPRNKENSAAVLVHLCSWNQQHLIEAQKLGIM-DLLIEMAENGTDRGKRKAAQLL 629
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
F6HQ94_VITVI3.544e-14170.39Putative uncharacterized protein OS=Vitis vinifera... [more]
I1JE03_SOYBN2.133e-14071.24Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
A5B4U0_VITVI2.780e-14070.39Putative uncharacterized protein OS=Vitis vinifera... [more]
A0A067EXD2_CITSI6.789e-13972.73Uncharacterized protein OS=Citrus sinensis GN=CISI... [more]
V4SBN4_9ROSI1.551e-13872.40Uncharacterized protein OS=Citrus clementina GN=CI... [more]
M1CFU1_SOLTU1.382e-13670.82Uncharacterized protein OS=Solanum tuberosum GN=PG... [more]
K4B314_SOLLC1.645e-13669.84Uncharacterized protein OS=Solanum lycopersicum GN... [more]
V7C5W9_PHAVU2.894e-13673.68Uncharacterized protein OS=Phaseolus vulgaris GN=P... [more]
I1KM13_SOYBN1.903e-13471.15Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
S8DEF1_9LAMI5.783e-13265.68Uncharacterized protein OS=Genlisea aurea GN=M569_... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
PUB26_ARATH3.469e-12162.75U-box domain-containing protein 26 OS=Arabidopsis ... [more]
PUB25_ARATH1.519e-11863.97U-box domain-containing protein 25 OS=Arabidopsis ... [more]
PUB23_ARATH4.787e-1825.86E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis t... [more]
PUB31_ARATH1.451e-1729.58U-box domain-containing protein 31 OS=Arabidopsis ... [more]
PUB30_ARATH3.978e-1629.68U-box domain-containing protein 30 OS=Arabidopsis ... [more]
PUB22_ARATH1.129e-1331.76E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis t... [more]
PUB4_ARATH6.619e-1329.75U-box domain-containing protein 4 OS=Arabidopsis t... [more]
PUB12_ORYSJ5.472e-1129.45U-box domain-containing protein 12 OS=Oryza sativa... [more]
PUB2_ARATH6.803e-1127.34U-box domain-containing protein 2 OS=Arabidopsis t... [more]
PUB12_ARATH9.354e-1126.88U-box domain-containing protein 12 OS=Arabidopsis ... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 4..266
e-value: 4.7E-18
score: 64.2
NoneNo IPR availablePANTHERPTHR22849WDSAM1 PROTEINcoord: 1..289
NoneNo IPR availablePANTHERPTHR22849:SF52E3 UBIQUITIN-PROTEIN LIGASE PUB24-RELATEDcoord: 1..289
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 4..267

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0004217 ID=g.arboreum_cottongen_reftransV1_0004217; Name=g.arboreum_cottongen_reftransV1_0004217; organism=Gossypium arboreum; type=contig; length=938bp
AGCTTCGGCGGTTTCCAGTCCGTTTCAGCCTCGTCTCTCGGCTCTGCGTC
GACTCAAGGGACTGGCAAGAGACTCGGATAAGAACCGGTCCGTTATTTCT
TCACATGACGCACGTGAGGTACTGATAGATATCGTGTTTTCGGATACAGG
CTCGTCGGAGTTGAGCGTGGAGGCGCTTGCGGTTTTAGTGATGTTTCAAC
TCAATGAATCCGAGTGCGAGTCGATTGGTTCGGATCCCAACAGAGTGGTC
TACCTGTCGCGTATGTTGTTCCATTCCTCAATCGAAGTACGAATTAACTC
GGCTTCACTCATCGAAAACGTTCTCTCCGGCACGAGATCGCCGGATCTTC
GAGCTCAGATATGCAATGCGGATGAGATCTTCGAAGGCGTCGTGGACATA
TTAAGGAACCTCAACTCTTATCCTCGCGCGCTGAGAATCGGCGTTCGGGC
TCTCTTCGCCTTGTGCTTAGTGAAGCAAACGAGGCACAAAGCCGTCCAAG
CCGGAGCGCCGGCGATGTTGATCGACCGGTTGGCCGATTTGGACAAGTGC
GAGGCCGAACGAGCTCTGGCGACGATAGAATTGTTGTGCCGGATCCCCTC
CGGGTGTTTGGCGTTCGCGGCGCACGCGCTGACTGTCCCGCTGCTGGTAA
AAACGATACTGAAGATCTCGGACAGGGCTACGGAGTACGCGGCGGGTGCA
CTGATGGCGCTGTGCTCGGAGTCGGAAGGGAGCCAGAGGGAGGCGGTGAG
CGCGGGGGTTCTGACACAGCTGCTATTGCTGGTTCAAAGTGATTGTACGG
AGAGGGCGAAGAGGAAGGCCCAAATGCTTCTTAAGTTGCTTCGGGATTCG
TGGCCCGAAGATTCCATCGGCAATTCGGATGATTTTGCTTGCAGTGAAAT
CGTACCCTTTTGACCATCCCTCTCGCCTCACACCGAAA
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding