g.arboreum_cottongen_reftransV1_0004217, g.arboreum_cottongen_reftransV1_0004217 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy TrEMBL
Match: F6HQ94_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0063g00180 PE=4 SV=1) HSP 1 Score: 417.542 bits (1072), Expect = 3.544e-141 Identity = 214/304 (70.39%), Postives = 261/304 (85.86%), Query Frame = 2 Query: 5 SAVSSPFQPRLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFSDT--GSSELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPEDSIGNSDDFACSEIVPF 910 S+ S+P RLSA++RL+GLARDSDKNRS+I SH+ +EVL+ ++FSD+ S+EL E+LA+LVMF L+ESEC + S P+RV +L +LFH+SIEVR+NSA+LIE V++GTRS DLRAQI N DEIFEG+ IL +YPRAL++G++ALFALCL KQ+RHKAV AGA LIDRLAD +KC+ ERALAT+ELLCR+P+GC AFAAHALTVPLLV+ ILK+SDRATEYAAGAL++LCS +E SQREAVSAGV+TQLLLLVQSDCTERAKRKAQ+LLKLLRDSWPEDS+ NSDDF CS++VPF Sbjct: 112 SSQSNPSHTRLSAVKRLRGLARDSDKNRSIIGSHNVQEVLLPVIFSDSECDSAELKHESLALLVMFPLSESECAFVASQPDRVAHLVSLLFHASIEVRVNSAALIEIVVAGTRSLDLRAQISNVDEIFEGITGILNYPLAYPRALKVGIKALFALCLAKQSRHKAVAAGAVTALIDRLADFEKCDVERALATVELLCRVPAGCAAFAAHALTVPLLVRKILKVSDRATEYAAGALLSLCSAAEQSQREAVSAGVVTQLLLLVQSDCTERAKRKAQLLLKLLRDSWPEDSVVNSDDFGCSDVVPF 415
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy TrEMBL
Match: I1JE03_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 415.231 bits (1066), Expect = 2.133e-140 Identity = 218/306 (71.24%), Postives = 267/306 (87.25%), Query Frame = 2 Query: 2 ASAVSSPFQPRLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFSDTGSSELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPEDSIG-NSDDFACSE--IVPF 910 AS+ S+P RLS++RRL+ LARDSDKNRS+I+SH+ R++L+ IVF++ GS EL E+LA+LVMF L ESEC S+ SD ++ YLSRML H+S +VR+NSA+LIE V++GT SP+LRA++ + DEI++GVVD+LR+ S+PRAL+IG++ALFALCLVK TR KAV AG PA+L+DRLAD +KC+AERALAT+ELLCRIP+GC AFA HALTVP+LVK ILKISDRATEYAAGAL++LCSESE QREAV+AGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWP+DSIG NSDDFACS+ +VPF Sbjct: 111 ASSGSAPAHLRLSSIRRLRQLARDSDKNRSLIASHNVRQILLPIVFNN-GSDELKNESLALLVMFPLGESECASLASDSVKIGYLSRMLTHNSFDVRVNSAALIEIVVAGTHSPELRAEVSSVDEIYDGVVDLLRSPISHPRALKIGIKALFALCLVKNTRQKAVDAGTPAVLVDRLADFEKCDAERALATVELLCRIPAGCEAFAGHALTVPMLVKIILKISDRATEYAAGALLSLCSESERCQREAVAAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPQDSIGNNSDDFACSQVVVVPF 415
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy TrEMBL
Match: A5B4U0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026443 PE=4 SV=1) HSP 1 Score: 417.157 bits (1071), Expect = 2.780e-140 Identity = 214/304 (70.39%), Postives = 261/304 (85.86%), Query Frame = 2 Query: 5 SAVSSPFQPRLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFSDT--GSSELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPEDSIGNSDDFACSEIVPF 910 S+ S+P RLSA++RL+GLARDSDKNRS+I SH+ +EVL+ ++FSD+ S+EL E+LA+LVMF L+ESEC + S P+RV +L +LFH+SIEVR+NSA+LIE V++GTRS DLRAQI N DEIFEG+ IL +YPRAL++G++ALFALCL KQ+RHKAV AGA LIDRLAD +KC+ ERALAT+ELLCR+P+GC AFAAHALTVPLLV+ ILK+SDRATEYAAGAL++LCS +E SQREAVSAGV+TQLLLLVQSDCTERAKRKAQ+LLKLLRDSWPEDS+ NSDDF CS++VPF Sbjct: 173 SSQSNPSHTRLSAVKRLRGLARDSDKNRSIIGSHNVQEVLLPVIFSDSECDSAELKHESLALLVMFPLSESECAFVASQPDRVAHLVSLLFHASIEVRVNSAALIEIVVAGTRSLDLRAQISNVDEIFEGITGILNYPLAYPRALKVGIKALFALCLAKQSRHKAVAAGAVTALIDRLADFEKCDVERALATVELLCRVPAGCAAFAAHALTVPLLVRKILKVSDRATEYAAGALLSLCSAAEQSQREAVSAGVVTQLLLLVQSDCTERAKRKAQLLLKLLRDSWPEDSVVNSDDFGCSDVVPF 476
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy TrEMBL
Match: A0A067EXD2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g014817mg PE=4 SV=1) HSP 1 Score: 411.764 bits (1057), Expect = 6.789e-139 Identity = 224/308 (72.73%), Postives = 263/308 (85.39%), Query Frame = 2 Query: 2 ASAVSSPFQPRLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFSDTG-----SSELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPEDSIGNSDDFACSEIVPF 910 AS+ S+ + RLSALRRL+GLARDSDKNRS+ISSH+ R +L + F++ S EL+ E+LA+LVMF L E+EC I SD +++ LS +LFHSSIEVR+NSA+LIE VL+G RS +LRAQI N DEIFEGV+DIL+NL+SYPR L++G++ALFALCLVKQTR+KAV AGA L+DRLAD DKC+AERALAT+ELLCRIP+GC FA HALTVPLLVKTILKISDRATEYAAGAL ALCS SE QR+AVSAGVLTQLLLLVQSDCT+RAKRKAQ+LLKLLRDSWP+DSIGNSDDFACSE+VPF Sbjct: 111 ASSESNTYGSRLSALRRLRGLARDSDKNRSLISSHNVRAILSQVFFTNINVKTASSPELAHESLALLVMFPLTETECMEIASDADKITSLSSLLFHSSIEVRVNSAALIEIVLAGMRSQELRAQISNLDEIFEGVIDILKNLSSYPRGLKVGIKALFALCLVKQTRYKAVAAGAAETLVDRLADFDKCDAERALATVELLCRIPAGCAEFAEHALTVPLLVKTILKISDRATEYAAGALAALCSASERCQRDAVSAGVLTQLLLLVQSDCTDRAKRKAQLLLKLLRDSWPQDSIGNSDDFACSEVVPF 418
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy TrEMBL
Match: V4SBN4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10028522mg PE=4 SV=1) HSP 1 Score: 410.609 bits (1054), Expect = 1.551e-138 Identity = 223/308 (72.40%), Postives = 262/308 (85.06%), Query Frame = 2 Query: 2 ASAVSSPFQPRLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFSDTG-----SSELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPEDSIGNSDDFACSEIVPF 910 AS+ S+ + R+SALRRL+GLARDSDKNR +ISSH+ R +L + F++ S EL+ E+LA+LVMF L E+EC I SD +++ LS +LFHSSIEVR+NSA+LIE VL+G RS +LRAQI N DEIFEGV+DIL+NL+SYPR L++G++ALFALCLVKQTRHKAV AGA L+DRLAD DKC+AERALAT+ELLCRIP+GC FA HALTVPLLVKTILKISDRATEYAAGAL ALCS SE QR+AVSAGVLTQLLLLVQSDCT+RAKRKAQ+LLKLLRDSWP+DSIGNSDDFACSE+VPF Sbjct: 111 ASSESNTYGSRMSALRRLRGLARDSDKNRCLISSHNVRAILSQVFFTNINVNTASSPELAHESLALLVMFPLTETECMEIASDADKITSLSSLLFHSSIEVRVNSAALIEIVLAGMRSQELRAQISNLDEIFEGVIDILKNLSSYPRGLKVGIKALFALCLVKQTRHKAVAAGAAETLVDRLADFDKCDAERALATVELLCRIPAGCAEFAEHALTVPLLVKTILKISDRATEYAAGALAALCSASERCQRDAVSAGVLTQLLLLVQSDCTDRAKRKAQLLLKLLRDSWPQDSIGNSDDFACSEVVPF 418
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy TrEMBL
Match: M1CFU1_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400025884 PE=4 SV=1) HSP 1 Score: 405.601 bits (1041), Expect = 1.382e-136 Identity = 216/305 (70.82%), Postives = 257/305 (84.26%), Query Frame = 2 Query: 2 ASAVSSPFQPRLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFS--DTGSSELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPEDSIGNSDDFACSEIVPF 910 A+A S+ R++ALRRL+GLARDSDKNRSVIS+++ARE+L+ IVFS D+ SSEL+ E+LA+L MF L+E EC + SDP RV YL MLFH SI+VR+NSA+LIE V++G RS +LRAQI NAD++FEGVV IL +YPRAL++G++ALFALCLVKQ R +AV AGA LIDRL D +KC+AERALATIELL RIPSGC A A+HALTVPLLVK ILKIS+RATEYAAGAL++LCS SE +Q+EAV+AGVL QLLLLVQSDCTERAKRKAQMLLK LRD WPEDSI NSDDFACS++VPF Sbjct: 111 AAAQSNHMNSRVAALRRLRGLARDSDKNRSVISANNAREILLAIVFSRMDSDSSELNHESLAILSMFPLSEPECVFVASDPERVSYLVAMLFHPSIDVRVNSAALIEIVVAGMRSSELRAQISNADDVFEGVVGILNYPLAYPRALKVGIKALFALCLVKQHRQRAVTAGAVEALIDRLQDFEKCDAERALATIELLSRIPSGCAALASHALTVPLLVKIILKISERATEYAAGALLSLCSASEQAQKEAVAAGVLIQLLLLVQSDCTERAKRKAQMLLKQLRDCWPEDSIANSDDFACSDVVPF 415
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy TrEMBL
Match: K4B314_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc01g107980.2 PE=4 SV=1) HSP 1 Score: 405.601 bits (1041), Expect = 1.645e-136 Identity = 213/305 (69.84%), Postives = 256/305 (83.93%), Query Frame = 2 Query: 2 ASAVSSPFQPRLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFS--DTGSSELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPEDSIGNSDDFACSEIVPF 910 A+A S+ R++ALRRL+GLARDS+KNRSVIS+++ARE+L+ IVFS D+ +SEL E+LA+L MF L+E EC + SDP RV YL MLFH SI+VR+NSA+LIE V++G RSP+ RAQI NAD++FEGVV IL +YPRAL++G++ALFALCLVKQ R +AV AGA LIDRL D +KC+AERALATIELL RIPSGC A A+HALTVPLLVK ILKIS+RATEYAAGAL++LCS SE +Q+EAV+AGVL QLLLLVQSDCTERAKRKAQMLLK LRD WPEDSI N+DDFACS++VPF Sbjct: 111 AAAQSNHMNSRVAALRRLRGLARDSEKNRSVISANNAREILLAIVFSRMDSDASELHHESLAILSMFPLSEPECVFVASDPGRVGYLVAMLFHPSIDVRVNSAALIETVVAGMRSPEFRAQISNADDVFEGVVGILNYPLAYPRALKVGIKALFALCLVKQHRQRAVSAGAVEALIDRLQDFEKCDAERALATIELLSRIPSGCAALASHALTVPLLVKIILKISERATEYAAGALLSLCSASEQAQKEAVAAGVLIQLLLLVQSDCTERAKRKAQMLLKQLRDCWPEDSIANTDDFACSDVVPF 415
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy TrEMBL
Match: V7C5W9_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G048200g PE=4 SV=1) HSP 1 Score: 404.831 bits (1039), Expect = 2.894e-136 Identity = 210/285 (73.68%), Postives = 252/285 (88.42%), Query Frame = 2 Query: 62 LARDSDKNRSVISSHDAREVLIDIVFSDTGSSELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPEDSIGNSDDFACSE--IVPF 910 LARDSDKNRS+ISSH+ R++L+ IVF G+SEL+ EALA+LV+F L ESEC ++ SD +V YLSR+L H+S++VR+NSA+LIE V++GT SP+LRA + DEI++GVVD+LR+ SYPRAL+IG++ALFALCLVKQTRHKAV AGAPA+L+DRLAD +KC+AERALAT+ELLCRIP+GC AFA HALTVP+LVK ILKIS RATEYAAGAL++LCSESE QREAV+AGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWP+D IGNSDDFACS+ +VPF Sbjct: 131 LARDSDKNRSLISSHNVRQILLPIVFH--GASELNHEALALLVLFPLGESECAALASDSEKVNYLSRLLSHNSLDVRVNSAALIEIVVAGTHSPELRACVSEVDEIYDGVVDLLRSPISYPRALKIGIKALFALCLVKQTRHKAVAAGAPAVLVDRLADFEKCDAERALATVELLCRIPAGCEAFAGHALTVPMLVKIILKISHRATEYAAGALLSLCSESERCQREAVTAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPQDCIGNSDDFACSQVVVVPF 413
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy TrEMBL
Match: I1KM13_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 400.208 bits (1027), Expect = 1.903e-134 Identity = 217/305 (71.15%), Postives = 268/305 (87.87%), Query Frame = 2 Query: 2 ASAVSSPFQPRLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFSDTGSSELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPEDSIGNSDDFACSE--IVPF 910 AS+ S+P RLS+LRRL+ LARDSDKNRS+I+SH+ ++L+ IVF++ GS ELS E+LA+LVMF L ESEC S+ SD ++ YLSRML H+S +VR+NSA+L+E V+ GT SP+LRA++ + DEI++GVVD+LR+ S+PRAL+IG++ALFALCLVK TR KAV AGAPA+L+DRLAD +KC+AERALAT+ELLCRIP+GC AFAAHALTVP+LVK ILKIS+RATEYAAGAL++LCSESE QREAV+AGVLTQLLLL+QSDCTERAKRKAQMLLKLLRDSWP+DS+GNSDDFACS+ +VPF Sbjct: 111 ASSDSAPAHLRLSSLRRLRQLARDSDKNRSLIASHNLLQILLPIVFNN-GSDELSHESLALLVMFPLGESECASLASDSMKIGYLSRMLAHNSFDVRVNSAALVEIVVVGTHSPELRAEVSSVDEIYDGVVDLLRSPISHPRALKIGIKALFALCLVKNTRQKAVAAGAPAVLVDRLADFEKCDAERALATVELLCRIPAGCAAFAAHALTVPMLVKIILKISNRATEYAAGALLSLCSESERCQREAVAAGVLTQLLLLMQSDCTERAKRKAQMLLKLLRDSWPQDSVGNSDDFACSQVVVVPF 414
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy TrEMBL
Match: S8DEF1_9LAMI (Uncharacterized protein OS=Genlisea aurea GN=M569_17045 PE=4 SV=1) HSP 1 Score: 394.045 bits (1011), Expect = 5.783e-132 Identity = 199/303 (65.68%), Postives = 249/303 (82.18%), Query Frame = 2 Query: 2 ASAVSSPFQPRLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFSDTGS--SELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPEDSIGNSDDFACSEIV 904 AS+ S R+SALRRL+GLARDS+KNRSVI++++ R+V I ++F+ GS SEL++E+L +L MF L E EC I SD +RV YL +LFHSSI+VR+NSA+++E ++G RSP+LRA+I + D +F G+V IL +YP AL+IG++ALFALCL KQ RH+AV AGA LIDRLA+ +KC+AERALAT+ELLCR+P GC AFA+HALTVPLLVK ILKISDRATEYAAGAL++LCS SE SQ EAV+AGVLTQL+LLVQSDCTERAKRKAQMLLKLLR+SWP +S+ NSDDFA S++V Sbjct: 111 ASSGSGNLLSRVSALRRLRGLARDSEKNRSVIAANNGRQVFISLLFAGVGSEPSELNLESLGILSMFSLLEQECLYIASDLDRVRYLVNLLFHSSIDVRVNSAAVVEVTVAGIRSPELRARISSLDGVFRGIVGILNYPLAYPHALKIGIKALFALCLAKQHRHRAVSAGAVESLIDRLAEFEKCDAERALATVELLCRVPDGCAAFASHALTVPLLVKIILKISDRATEYAAGALLSLCSASEQSQGEAVAAGVLTQLILLVQSDCTERAKRKAQMLLKLLRNSWPLESMCNSDDFAGSDVV 413
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy Swiss-Prot
Match: PUB26_ARATH (U-box domain-containing protein 26 OS=Arabidopsis thaliana GN=PUB26 PE=2 SV=1) HSP 1 Score: 361.688 bits (927), Expect = 3.469e-121 Identity = 187/298 (62.75%), Postives = 245/298 (82.21%), Query Frame = 2 Query: 32 RLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFSDTGSSELSVEAL----AVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLA-DLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPEDSIGNSDDFACSEIVPF 910 R +A+RRL+GLARDS+KNR +I+ H+ARE+L+ I+F+D ++ LS E + A+LV+ + E+ECE++ SDP+RV +++R+LF SSIE+R+N+A+LIE VL+G +S DL+ I +D IFEGV+D+L+N S RAL+IG++A+FALCLVKQTRH A+ AGAP +LIDRLA D D+C+ ER LAT+ELLCR+P GC AF HALTVPL+VKTIL++SDRATEYAAGAL+ALC+ E + EA +AG++TQLLLLVQSDCTERAKRKAQMLLKLLRDSWP+DS +SDDF SE+ PF Sbjct: 124 RAAAIRRLRGLARDSEKNRVLIAGHNAREILVRILFADIETTSLSSELVSESLALLVLLHMTETECEAVASDPSRVGFMTRLLFDSSIEIRVNAAALIEMVLTGAKSMDLKLIISGSDSIFEGVLDLLKNPISSRRALKIGIKAIFALCLVKQTRHLAISAGAPGILIDRLAADFDRCDTERGLATVELLCRLPEGCAAFGEHALTVPLMVKTILRVSDRATEYAAGALLALCTAEERCRDEAAAAGLVTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPDDSTVHSDDFNRSEVAPF 421
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy Swiss-Prot
Match: PUB25_ARATH (U-box domain-containing protein 25 OS=Arabidopsis thaliana GN=PUB25 PE=2 SV=1) HSP 1 Score: 354.755 bits (909), Expect = 1.519e-118 Identity = 190/297 (63.97%), Postives = 239/297 (80.47%), Query Frame = 2 Query: 32 RLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFSDTGSSELSVEALAVLVMFQLNE-SECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLA-DLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPE-DSIGNSDDFAC-SEIVPF 910 R +ALRRL+G ARDSDKNR +I++H+A E+LI I+FS+T SSEL E+LA+LVM + E ++ SI SDP RV +L+R+LF SSIE R+N+A+LIE V +GT+S DL+ I N++ +FEGV+D+LRN S RAL+IG++ LFALC VK TRH A+ AGAP +LIDRLA D D+C+ ERALAT+ELLCR P GC AF HALTVPLLVKTIL++SDRATEYAAGAL+ALC+ E + EA AGV+ QLLL+VQS+CTERAK+KAQ LLKLLRDSWP+ +S NSDDF C S++VPF Sbjct: 125 RAAALRRLRGFARDSDKNRVLIAAHNATEILIKILFSETTSSELVSESLALLVMLPITEPNQFVSISSDPGRVEFLTRLLFDSSIETRVNAAALIEIVSTGTKSADLKGSISNSESVFEGVLDLLRNPISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAADFDRCDTERALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAGALLALCTAEERWREEAAGAGVVVQLLLMVQSECTERAKKKAQKLLKLLRDSWPDYNSFANSDDFGCSSQVVPF 421
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy Swiss-Prot
Match: PUB23_ARATH (E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana GN=PUB23 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 4.787e-18 Identity = 75/290 (25.86%), Postives = 147/290 (50.69%), Query Frame = 2 Query: 14 SSPFQPRLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFSDTGSSELSVEALAVLVMFQLNESECESIGSDPNR---VVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLAD----LDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMA---LCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSW 853 +S + ++ L+RL+ + ++ N+ + + E L +IV +D+ + L+ EAL +L + +E+ +++ ++ V L++++ E R+ + L++N+L D + E+F VV IL + S +A + + L +C + RHKAV+AG +++I+ L D ++ E A+ ++LLC+ G F H + ++ K IL++S A++ A L++ C+ + E + GV+ +L L++Q C + K KA+ LLKL W Sbjct: 111 ASSHENQVKCLKRLRQIVSENATNKRCLEAAGVPEFLANIVSNDSENGSLTDEALNLLYHLETSETVLKNLLNNKKDNNIVKSLTKIMQRGMYESRVYATLLLKNILEVA---DPMQSMTLKPEVFTEVVQILDDRISQ-KATKAAMHILVNICPWGRNRHKAVEAGVISVIIELLMDESFTSERRGPEMAMVVLDLLCQCAEGRAEFLNHGAAIAVVCKKILRVSQTASDRAVRVLLSVGRFCA-TPALLHEMLQLGVVAKLCLVLQVSCGGKTKEKAKELLKLHARVW 395
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy Swiss-Prot
Match: PUB31_ARATH (U-box domain-containing protein 31 OS=Arabidopsis thaliana GN=PUB31 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.451e-17 Identity = 84/284 (29.58%), Postives = 143/284 (50.35%), Query Frame = 2 Query: 35 LSALRRLKGLARD---SDKNRSVISSHDAREVLID--------IVFSDTGSSELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRA----LFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCS-ESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKL 838 L LR+ KG A+ S+ + V++ A++ ++D + S S + EA+A+LV +L+ S+ ++ P RV + ML SIE +IN A LI ++ RA++ ++ + G++ ++++ R R GV L ++ + KQ R+ V+ GA L+D L LD E AL ++ LC G +A T+P V+ ++K+S++ T YA L ++C SE AV G+ +LLL++QS C K+++ LLKL Sbjct: 149 LGTLRKAKGKAKVHALSELKQVVMAHAIAKKTVVDEGGVFVISSLLSPFTSHAVGSEAIAILVNLELD-SDSKAGLMQPARVSLMVDMLNDGSIETKINCARLIGRLV---EEKGFRAELVSSHSLLVGLMRLVKD-----RRRRNGVSPALTLLKSVSVHKQVRNLLVRIGAVPQLVDVLPCLDVECLESALFVLDSLCLESEGRIALKDSVNTIPHTVRLLMKVSEKCTNYAISILWSVCKLASEECSSLAVEVGLAAKLLLVIQSGCDPALKQRSAELLKL 423
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy Swiss-Prot
Match: PUB30_ARATH (U-box domain-containing protein 30 OS=Arabidopsis thaliana GN=PUB30 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.978e-16 Identity = 84/283 (29.68%), Postives = 139/283 (49.12%), Query Frame = 2 Query: 35 LSALRRLKGLARD---SDKNRSVISSHDAREVLID-----IVFSDTG---SSELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDIL---RNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCS-ESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKL 838 L L++ KG AR S+ + VI+ AR+ +++ ++ S G S + E +A+LV L+ S+ +S P +V + ML S E +IN A LI ++ RA++ ++ + G++ ++ R+ N ALR+ L + + KQ R V GA L+D L LD E AL ++ LC G +A A T+P V+ ++++S+ T YA L ++C E AV G+ +LLL++QS C K+++ LLKL Sbjct: 153 LGTLKKAKGQARVHALSELKQIVIAHLMARKTVVEEGGVSVISSLLGPFTSHAVGSEVVAILVSLDLD-SDSKSGLMQPAKVSLIVDMLNDGSNETKINCARLIRGLV---EEKGFRAELVSSHSLLVGLMRLVKDKRHRNGVSPALRL----LKPISVHKQVRSLMVSIGAVPQLVDILPSLDPECLELALFVLDALCTDVEGRVAVKDSANTIPYTVRVLMRVSENCTNYALSILWSVCKLAPEECSPLAVEVGLAAKLLLVIQSGCDAALKQRSAELLKL 427
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy Swiss-Prot
Match: PUB22_ARATH (E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana GN=PUB22 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.129e-13 Identity = 54/170 (31.76%), Postives = 88/170 (51.76%), Query Frame = 2 Query: 374 EIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAER-----ALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMA---LCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPE 859 E+F V+ IL + S+ +A R ++ L C + RHKAV+ G +M+I+ L D D +ER A+ +++LC+ G F H + ++ K IL++S +E A L++ C+ Q E + GV+ +L L++Q C + K KA+ LLKL W E Sbjct: 255 ELFGEVIQILHDQISH-KATRSAMQILVITCPWGRNRHKAVEGGTISMIIELLMD-DTFSSERRNSEMAMVVLDMLCQCAEGRAEFLNHGAAIAVVSKKILRVSQITSERAVRVLLSVGRFCATPSLLQ-EMLQLGVVAKLCLVLQVSCGNKTKEKAKELLKLHARVWRE 421
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy Swiss-Prot
Match: PUB4_ARATH (U-box domain-containing protein 4 OS=Arabidopsis thaliana GN=PUB4 PE=1 SV=3) HSP 1 Score: 72.7886 bits (177), Expect = 6.619e-13 Identity = 83/279 (29.75%), Postives = 137/279 (49.10%), Query Frame = 2 Query: 14 SSPFQPRLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFS-DTGSSELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRD 847 SS + A L+ LA+ + NR VI + A +L+++++S D+ + E A+ L+ +N++ ++I +D + L +L + S E + NSA+ + S + + + +I + I +VD+L N PR + ALF L + ++ + VQ+GA LID L D ++A+A + L IP G A +PLLV+ + S R E AA AL+ L + S + G + L+ L QS T RA+ KAQ LL R+ Sbjct: 552 SSSLDTQRQATAELRLLAKHNMDNRIVIGNSGAIVLLVELLYSTDSATQE---NAVTALLNLSINDNNKKAI-ADAGAIEPLIHVLENGSSEAKENSAATL---FSLSVIEENKIKIGQSGAIGP-LVDLLGN--GTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLID-LMDPAAGMVDKAVAVLANLATIPEGRNAIGQEG-GIPLLVEVVELGSARGKENAAAALLQLSTNSGRFCNMVLQEGAVPPLVALSQS-GTPRAREKAQALLSYFRN 817
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy Swiss-Prot
Match: PUB12_ORYSJ (U-box domain-containing protein 12 OS=Oryza sativa subsp. japonica GN=PUB12 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 5.472e-11 Identity = 81/275 (29.45%), Postives = 134/275 (48.73%), Query Frame = 2 Query: 62 LARDSDKNRSVISSHDAREVLIDIVFS-DTGSSELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNL--NSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPEDSI-GN 874 LA+ + NR I+ A +L++++ S D + E +V AL L + + N++ D + + + +L S+E R N+A+ + S + + + I A G + L NL + PR + A+F LC+ + + +AV+AG L++ L D + AL+ + +L P G + A + +P LV+ I S R E AA L LCS A +AGV L L ++ T+RAKRKA +L+L+ + EDS+ GN Sbjct: 350 LAKRNVNNRICIAEAGAIPLLVNLLSSSDPRTQEHAVTALLNLSIHENNKASI----VDSHAIPKIVEVLKTGSMETRENAAATL---FSLSVVDENKVTIGAA-----GAIPPLINLLCDGSPRGKKDAATAIFNLCIYQGNKVRAVKAGIVIHLMNFLVDPTGGMIDEALSLLSILAGNPEGKIVI-ARSEPIPPLVEVIKTGSPRNRENAAAILWLLCSADTEQTLAAKAAGVEDALKELSETG-TDRAKRKASSILELMHQA-NEDSLKGN 609
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy Swiss-Prot
Match: PUB2_ARATH (U-box domain-containing protein 2 OS=Arabidopsis thaliana GN=PUB2 PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 6.803e-11 Identity = 76/278 (27.34%), Postives = 136/278 (48.92%), Query Frame = 2 Query: 14 SSPFQPRLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFSDTGSSELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIE-VRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLR 844 SS + A R++ LAR+S NR VI+ +A L+ +++S + +A+ L+ +N++ +S+ ++ +V L +L +E + NSA+ + S + + + +I A I E +VD+L + + + + ALF L + + + K ++AGA L++ L D E+A+ + L + G +A +P+LV+ + S R E A AL+ LC+ S + GV+ L+ L +S T R K KAQ LLK + Sbjct: 432 SSSLDTQREATARIRILARNSTDNRIVIARCEAIPSLVSLLYST--DERIQADAVTCLLNLSINDNN-KSLIAESGAIVPLIHVLKTGYLEEAKANSAA---TLFSLSVIEEYKTEIGEAGAI-EPLVDLLGSGSLSGK--KDAATALFNLSIHHENKTKVIEAGAVRYLVE-LMDPAFGMVEKAVVVLANLATVREGKIAIGEEG-GIPVLVEVVELGSARGKENATAALLQLCTHSPKFCNNVIREGVIPPLVALTKSG-TARGKEKAQNLLKYFK 697
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy Swiss-Prot
Match: PUB12_ARATH (U-box domain-containing protein 12 OS=Arabidopsis thaliana GN=PUB12 PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 9.354e-11 Identity = 75/279 (26.88%), Postives = 133/279 (47.67%), Query Frame = 2 Query: 26 QP--RLSALRRLKGLARDSDKNRSVISSHDAREVLIDI--VFSDTGSSELSVEALAVLVMFQLNESE-CESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNL-----NSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLL 832 QP R SA ++ LA+ ++ NR I++ A +L+++ + +D+ + E +V ++ L + Q N+ + S G+ P V L + S+E R N+A+ + + + +++ G + L R + ALF LC+ + + KAV+AG +L+ L + + + +L+ + +L P G A A VP+LV I S R E +A L+ LCS ++ EA G++ LL+ + + T+R KRKA LL Sbjct: 368 QPEDRRSAAGEIRLLAKQNNHNRVAIAASGAIPLLVNLLTISNDSRTQEHAVTSILNLSICQENKGKIVYSSGAVPGIVHVLQK----GSMEARENAAATL-----------FSLSVIDENKVTIGAAGAIPPLVTLLSEGSQRGKKDAATALFNLCIFQGNKGKAVRAGLVPVLMRLLTEPESGMVDESLSILAILSSHPDGKSEVGA-ADAVPVLVDFIRSGSPRNKENSAAVLVHLCSWNQQHLIEAQKLGIM-DLLIEMAENGTDRGKRKAAQLL 629 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 15
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0004217 ID=g.arboreum_cottongen_reftransV1_0004217; Name=g.arboreum_cottongen_reftransV1_0004217; organism=Gossypium arboreum; type=contig; length=938bpback to top |