g.arboreum_cottongen_reftransV1_0010449, g.arboreum_cottongen_reftransV1_0010449 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0010449 vs. ExPASy TrEMBL
Match: D7TPK3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0063g00600 PE=4 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 4.791e-45 Identity = 81/101 (80.20%), Postives = 88/101 (87.13%), Query Frame = -2 Query: 1 VSKLSLSVHEFHLYDKSTDAPWKLVLRYYDSKDHPRESSSKAFKLDLEAVRPDPSTPLEEYRLRIALLPIRLQLHQSQLDFLISFFGEKSTSLDQTTS-CH 300 VSKLSL + +FHLYD S DAPWKLVL YY SKDHPRESSSKAFKLDLEAVRPDPSTPLEEYRLRIA+LPI L LHQ QLDFL+SFFG K+ S+DQ+ S CH Sbjct: 1532 VSKLSLFIKDFHLYDNSRDAPWKLVLGYYHSKDHPRESSSKAFKLDLEAVRPDPSTPLEEYRLRIAVLPILLHLHQGQLDFLVSFFGGKNQSVDQSPSHCH 1632
BLAST of g.arboreum_cottongen_reftransV1_0010449 vs. ExPASy TrEMBL
Match: M5W270_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000068mg PE=4 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.027e-43 Identity = 77/100 (77.00%), Postives = 88/100 (88.00%), Query Frame = -2 Query: 4 SVSKLSLSVHEFHLYDKSTDAPWKLVLRYYDSKDHPRESSSKAFKLDLEAVRPDPSTPLEEYRLRIALLPIRLQLHQSQLDFLISFFGEKSTSLDQTTSC 303 SVSKLSLS+ +F+LYD+S DAPWKLVL YY SKD PR+SSSKAFKLDLE+VRPDP TPLEEYRLR+ALLP+ L LHQ QLDFLISFFG KS+S+DQ+ C Sbjct: 1577 SVSKLSLSIQDFYLYDRSKDAPWKLVLGYYHSKDRPRKSSSKAFKLDLESVRPDPLTPLEEYRLRVALLPMLLHLHQCQLDFLISFFGAKSSSIDQSPGC 1676
BLAST of g.arboreum_cottongen_reftransV1_0010449 vs. ExPASy TrEMBL
Match: U5GJ18_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0004s148902g PE=4 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 1.399e-40 Identity = 73/97 (75.26%), Postives = 79/97 (81.44%), Query Frame = -2 Query: 10 VSKLSLSVHEFHLYDKSTDAPWKLVLRYYDSKDHPRESSSKAFKLDLEAVRPDPSTPLEEYRLRIALLPIRLQLHQSQLDFLISFFGEKSTSLDQTT 300 SKL LSV +FHLYD S APWK +L YY SKDHPRES+SKAFKLDLEAVRPDP PLEEYRLRIA LP+ L LHQSQLDFLISFFG KS S Q++ Sbjct: 157 ASKLCLSVQDFHLYDGSKTAPWKRILGYYHSKDHPRESTSKAFKLDLEAVRPDPLIPLEEYRLRIAFLPVLLHLHQSQLDFLISFFGPKSLSAGQSS 253
BLAST of g.arboreum_cottongen_reftransV1_0010449 vs. ExPASy TrEMBL
Match: K7K841_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 3.956e-39 Identity = 70/95 (73.68%), Postives = 81/95 (85.26%), Query Frame = -2 Query: 16 VSKLSLSVHEFHLYDKSTDAPWKLVLRYYDSKDHPRESSSKAFKLDLEAVRPDPSTPLEEYRLRIALLPIRLQLHQSQLDFLISFFGEKSTSLDQ 300 VSK+S+SV +F LYD+S DAPWKLVL YY SK HPRES S+AFKLDLEAVRPDP TPLEEYRL +A+LP+ L LHQSQLDFL++FFG K+T DQ Sbjct: 1571 VSKMSVSVQDFFLYDRSQDAPWKLVLGYYHSKGHPRESYSRAFKLDLEAVRPDPLTPLEEYRLNVAILPMLLHLHQSQLDFLVNFFGRKNTLKDQ 1665
BLAST of g.arboreum_cottongen_reftransV1_0010449 vs. ExPASy TrEMBL
Match: A0A0A0LAA0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G207330 PE=4 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 9.422e-39 Identity = 66/88 (75.00%), Postives = 78/88 (88.64%), Query Frame = -2 Query: 37 VSKLSLSVHEFHLYDKSTDAPWKLVLRYYDSKDHPRESSSKAFKLDLEAVRPDPSTPLEEYRLRIALLPIRLQLHQSQLDFLISFFGE 300 +S+LSLS+ +FHLYD S DAPWKLVL YY+SK+HPR+SSSKAFKLDLEA+RPDPS PLEEYRL I +LP+ L LHQ QLDFL++FFGE Sbjct: 1538 ISRLSLSIQDFHLYDSSVDAPWKLVLGYYNSKNHPRKSSSKAFKLDLEAIRPDPSIPLEEYRLCIGILPMLLHLHQCQLDFLVNFFGE 1625
BLAST of g.arboreum_cottongen_reftransV1_0010449 vs. ExPASy TrEMBL
Match: G7JLA6_MEDTR (Autophagy protein OS=Medicago truncatula GN=MTR_4g086370 PE=4 SV=2) HSP 1 Score: 148.673 bits (374), Expect = 1.399e-38 Identity = 71/101 (70.30%), Postives = 82/101 (81.19%), Query Frame = -2 Query: 1 VSKLSLSVHEFHLYDKSTDAPWKLVLRYYDSKDHPRESSSKAFKLDLEAVRPDPSTPLEEYRLRIALLPIRLQLHQSQLDFLISFFGEKSTSLDQ-TTSCH 300 VSK+SLSV +F+LYD+S +APW LVL YY SK HPRES SKAFKLDLEAVRPDP TPLEEYRL +A LP+ L LHQ QLDFL+ FFG K++S DQ +CH Sbjct: 1571 VSKMSLSVQDFYLYDRSQNAPWILVLGYYHSKGHPRESYSKAFKLDLEAVRPDPLTPLEEYRLNVAFLPMLLHLHQCQLDFLVDFFGRKNSSNDQFPNNCH 1671
BLAST of g.arboreum_cottongen_reftransV1_0010449 vs. ExPASy TrEMBL
Match: A0A0B2RWS5_GLYSO (Autophagy-related protein 2 OS=Glycine soja GN=glysoja_034366 PE=4 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 3.467e-38 Identity = 69/95 (72.63%), Postives = 80/95 (84.21%), Query Frame = -2 Query: 16 VSKLSLSVHEFHLYDKSTDAPWKLVLRYYDSKDHPRESSSKAFKLDLEAVRPDPSTPLEEYRLRIALLPIRLQLHQSQLDFLISFFGEKSTSLDQ 300 VSK+S+SV +F LYD+S DAPWKLVL YY SK HPRES S+AFK DLEAVRPDP TPLEEYRL +A+LP+ L LHQSQLDFL++FFG K+T DQ Sbjct: 1571 VSKMSVSVQDFFLYDRSQDAPWKLVLGYYHSKGHPRESYSRAFKSDLEAVRPDPLTPLEEYRLNVAILPMLLHLHQSQLDFLVNFFGRKNTLKDQ 1665
BLAST of g.arboreum_cottongen_reftransV1_0010449 vs. ExPASy TrEMBL
Match: M9Q2N2_TOBAC (Autophagy-related protein 2 (Fragment) OS=Nicotiana tabacum GN=ATG2 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 5.770e-38 Identity = 67/98 (68.37%), Postives = 79/98 (80.61%), Query Frame = -2 Query: 7 VSKLSLSVHEFHLYDKSTDAPWKLVLRYYDSKDHPRESSSKAFKLDLEAVRPDPSTPLEEYRLRIALLPIRLQLHQSQLDFLISFFGEKSTSLDQTTS 300 VS+ S++VH+F + D S APWKLVL YY SK RESSSKAFKLDLEAVRPDP+ PLEEYRLRIALLP+RL LHQ+QLDFLISFFG +++ + S Sbjct: 37 VSRQSITVHDFCVKDNSNAAPWKLVLGYYQSKGCLRESSSKAFKLDLEAVRPDPAIPLEEYRLRIALLPMRLHLHQNQLDFLISFFGGTKSAVTPSES 134
BLAST of g.arboreum_cottongen_reftransV1_0010449 vs. ExPASy TrEMBL
Match: A0A0B2R948_GLYSO (Autophagy-related protein 2 OS=Glycine soja GN=glysoja_020364 PE=4 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 7.018e-38 Identity = 69/95 (72.63%), Postives = 79/95 (83.16%), Query Frame = -2 Query: 16 VSKLSLSVHEFHLYDKSTDAPWKLVLRYYDSKDHPRESSSKAFKLDLEAVRPDPSTPLEEYRLRIALLPIRLQLHQSQLDFLISFFGEKSTSLDQ 300 VSK+S+SV + LYD+S DAPWKLVL YY SK HPRES S+AFKLDLEAVRPDP TPLEEYRL +A+LP+ L LHQSQLDFL++FFG KS DQ Sbjct: 1570 VSKMSVSVQDLFLYDRSQDAPWKLVLGYYHSKGHPRESYSRAFKLDLEAVRPDPLTPLEEYRLNVAILPMLLHLHQSQLDFLVNFFGRKSILKDQ 1664
BLAST of g.arboreum_cottongen_reftransV1_0010449 vs. ExPASy TrEMBL
Match: K7L2Z3_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 7.218e-38 Identity = 69/95 (72.63%), Postives = 79/95 (83.16%), Query Frame = -2 Query: 16 VSKLSLSVHEFHLYDKSTDAPWKLVLRYYDSKDHPRESSSKAFKLDLEAVRPDPSTPLEEYRLRIALLPIRLQLHQSQLDFLISFFGEKSTSLDQ 300 VSK+S+SV + LYD+S DAPWKLVL YY SK HPRES S+AFKLDLEAVRPDP TPLEEYRL +A+LP+ L LHQSQLDFL++FFG KS DQ Sbjct: 1570 VSKMSVSVQDLFLYDRSQDAPWKLVLGYYHSKGHPRESYSRAFKLDLEAVRPDPLTPLEEYRLNVAILPMLLHLHQSQLDFLVNFFGRKSILKDQ 1664
BLAST of g.arboreum_cottongen_reftransV1_0010449 vs. ExPASy Swiss-Prot
Match: ATG2_DEBHA (Autophagy-related protein 2 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=ATG2 PE=3 SV=2) HSP 1 Score: 52.7582 bits (125), Expect = 1.453e-7 Identity = 29/93 (31.18%), Postives = 45/93 (48.39%), Query Frame = -2 Query: 19 SKLSLSVHEFHLYDKSTDAPWKLVLRYYDSKDHPRESSSKAFKLDLEAVRPDPSTPLEEYRLRIALLPIRLQLHQSQLDFLISFFGEKSTSLD 297 + + L + + +YD ++ W L Y +S RE + K + VRP+P E + I++LPIRL + Q LDF I FF K + Sbjct: 1406 NSIDLRIEDIDIYDNIPNSTWNKFLSYMNSLGE-REIGTSMLKASITNVRPNPELCSTEAMIDISILPIRLHVDQDALDFFIRFFDFKDKRFE 1497
BLAST of g.arboreum_cottongen_reftransV1_0010449 vs. ExPASy Swiss-Prot
Match: ATG2_MAGO7 (Autophagy-related protein 2 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=ATG2 PE=3 SV=2) HSP 1 Score: 51.6026 bits (122), Expect = 3.853e-7 Identity = 30/97 (30.93%), Postives = 46/97 (47.42%), Query Frame = -2 Query: 7 SKLSLSVHEFHLYDKSTDAPWKLVLRYYDSKDHPRESSSKAFKLDLEAVRPDPSTPLEEYRLRIALLPIRLQLHQSQLDFLISFFGEKSTSLDQTTS 297 S + + + + +YD + WK YD PRE L + VRP EE + + +LP+RL + Q LDF+ FFG K ++ T+S Sbjct: 1701 SLIRVHIRDLDVYDHVPTSTWKR-FAMYDEDHGPREMGVPMVDLKVRIVRPVLDVTAEEIVMFVNVLPLRLHVDQDALDFITRFFGFKDDTIKTTSS 1796
BLAST of g.arboreum_cottongen_reftransV1_0010449 vs. ExPASy Swiss-Prot
Match: ATG2_ASPCL (Autophagy-related protein 2 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=atg2 PE=3 SV=1) HSP 1 Score: 50.447 bits (119), Expect = 7.410e-7 Identity = 29/85 (34.12%), Postives = 40/85 (47.06%), Query Frame = -2 Query: 43 SKLSLSVHEFHLYDKSTDAPWKLVLRYYDSKDHPRESSSKAFKLDLEAVRPDPSTPLEEYRLRIALLPIRLQLHQSQLDFLISFF 297 S L + V + ++D + WK Y RES + L++ VRP P E L+ LLP+RL + Q LDFL FF Sbjct: 1755 SSLDVRVRDLEIFDHVPTSTWKKFATYMQEAGE-RESGASMVHLEILTVRPVPELAASEIVLKATLLPLRLHVDQDALDFLCRFF 1838
BLAST of g.arboreum_cottongen_reftransV1_0010449 vs. ExPASy Swiss-Prot
Match: ATG2_NEUCR (Autophagy-related protein 2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=apg-2 PE=3 SV=2) HSP 1 Score: 50.447 bits (119), Expect = 7.864e-7 Identity = 25/87 (28.74%), Postives = 45/87 (51.72%), Query Frame = -2 Query: 43 SVSKLSLSVHEFHLYDKSTDAPWKLVLRYYDSKDHPRESSSKAFKLDLEAVRPDPSTPLEEYRLRIALLPIRLQLHQSQLDFLISFF 303 +++ + + +H+ ++D + WK YD RE S L++ V+P P P E +++ +LP+RL + Q LDF+ FF Sbjct: 1654 TINTIDVRIHDLDVFDHIRTSTWKK-FAMYDIDAGERELSKHMVHLEVLNVKPVPDLPATELVVKVNILPLRLHVDQDALDFITRFF 1739 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0010449 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0010449 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 4
InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0010449 ID=g.arboreum_cottongen_reftransV1_0010449; Name=g.arboreum_cottongen_reftransV1_0010449; organism=Gossypium arboreum; type=contig; length=304bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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