g.arboreum_cottongen_reftransV1_0002778, g.arboreum_cottongen_reftransV1_0002778 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0002778
Unique Nameg.arboreum_cottongen_reftransV1_0002778
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length471
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr1chromosomeg.arboreum_cottongen_reftransV1_0002778:1..471 .
Chr1:59000790..59001730 -
Homology
BLAST of g.arboreum_cottongen_reftransV1_0002778 vs. ExPASy TrEMBL
Match: M1BLG8_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400018584 PE=4 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 4.737e-77
Identity = 110/156 (70.51%), Postives = 132/156 (84.62%), Query Frame = -3
Query:    2 DILRRSGVMYRHLVCKKNLTDIKDRSVHQRNVALSHIETHHLDGIVYFANEHNIYSIDLFEQMRHIRQFGTWPVAKQTSDKSRAVLEGPVCNGTQVIGWHLNGLSKRFQRFHAEMSGFAFNSTILWDPKPWHRPTLEPIRQLDTVEDGFHASSFIE 469
            DILR +GVMYRHLVCK+NLT++KD SVH RN+AL+HIETH LDGIVYFA+  NIYS+D+FEQMR I +FGTW VA+   +  + +L+GP+CNG+QVIGWH NG++KRFQRF AE+SGFAF STILWDPK W+RPTLEPIRQLD VE G   S+FIE
Sbjct:  240 DILRGAGVMYRHLVCKRNLTEVKDNSVHLRNMALTHIETHRLDGIVYFADNSNIYSLDVFEQMRQISRFGTWVVARLAENNRKVILQGPICNGSQVIGWHPNGMAKRFQRFDAEISGFAFISTILWDPKRWNRPTLEPIRQLDIVEAGIQVSTFIE 395          
BLAST of g.arboreum_cottongen_reftransV1_0002778 vs. ExPASy TrEMBL
Match: A0A0B2PIP0_GLYSO (Putative beta-1,4-xylosyltransferase IRX9H OS=Glycine soja GN=glysoja_021862 PE=4 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 8.418e-77
Identity = 105/156 (67.31%), Postives = 129/156 (82.69%), Query Frame = -3
Query:    2 DILRRSGVMYRHLVCKKNLTDIKDRSVHQRNVALSHIETHHLDGIVYFANEHNIYSIDLFEQMRHIRQFGTWPVAKQTSDKSRAVLEGPVCNGTQVIGWHLNGLSKRFQRFHAEMSGFAFNSTILWDPKPWHRPTLEPIRQLDTVEDGFHASSFIE 469
            ++LR++GVMYRHLVC KNLTD+KDR VHQRN AL HIE H LDGIVYFA++ N+YS++LF+ +R I +FGTWPVA     K++A+LEGPVCN +QVIGWH N  SKR +RFH +MSGFAFNSTILWDPK W RP+  PIRQLDTV++GF  ++FIE
Sbjct:   10 EVLRKTGVMYRHLVCNKNLTDVKDRGVHQRNTALEHIEHHRLDGIVYFADDDNVYSLELFDALRDISRFGTWPVAMLVPSKNKAILEGPVCNASQVIGWHTNEKSKRLRRFHVDMSGFAFNSTILWDPKRWQRPSSNPIRQLDTVKEGFQETTFIE 165          
BLAST of g.arboreum_cottongen_reftransV1_0002778 vs. ExPASy TrEMBL
Match: A0A059BKY1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F00463 PE=4 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 4.707e-76
Identity = 112/156 (71.79%), Postives = 129/156 (82.69%), Query Frame = -3
Query:    2 DILRRSGVMYRHLVCKKNLTDIKDRSVHQRNVALSHIETHHLDGIVYFANEHNIYSIDLFEQMRHIRQFGTWPVAKQTSDKSRAVLEGPVCNGTQVIGWHLNGLSKRFQRFHAEMSGFAFNSTILWDPKPWHRPTLEPIRQLDTVEDGFHASSFIE 469
            DILR+SGVMYRHLVC KN TDIKDR VHQRN AL HIE H LDGIVYFA++ NIYS++LF  +R IR+FGTWPVA     KS+A+LEGPVCNG+QVIGWH N  SKR +RFH +MSGFAFNSTILWDPK W R TL PIRQLDTV++GF  ++FI+
Sbjct:  202 DILRKSGVMYRHLVCTKNSTDIKDRGVHQRNTALEHIERHKLDGIVYFADDDNIYSLELFHSLRQIRRFGTWPVAMLAQSKSKAILEGPVCNGSQVIGWHTNEKSKRLRRFHVDMSGFAFNSTILWDPKRWRRLTLHPIRQLDTVKEGFQETTFIQ 357          
BLAST of g.arboreum_cottongen_reftransV1_0002778 vs. ExPASy TrEMBL
Match: R0ILI6_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10009365mg PE=4 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 9.275e-76
Identity = 107/156 (68.59%), Postives = 129/156 (82.69%), Query Frame = -3
Query:    2 DILRRSGVMYRHLVCKKNLTDIKDRSVHQRNVALSHIETHHLDGIVYFANEHNIYSIDLFEQMRHIRQFGTWPVAKQTSDKSRAVLEGPVCNGTQVIGWHLNGLSKRFQRFHAEMSGFAFNSTILWDPKPWHRPTLEPIRQLDTVEDGFHASSFIE 469
            +ILR++GVMYRHLVCK+N+T IKDR VHQRN AL HIE H LDGIVYFA++ NIYS++LF+ +R IR+FGTWPVA     K++A+LEGPVCNG+QVIGWH N  SKR +RFH +MSGFAFNSTILWDPK W RP   P RQLDTV++GF  ++FIE
Sbjct:  190 EILRKTGVMYRHLVCKRNMTSIKDRGVHQRNTALEHIELHKLDGIVYFADDDNIYSLELFQSLRQIRRFGTWPVAMLAPSKNKAILEGPVCNGSQVIGWHTNEKSKRLRRFHVDMSGFAFNSTILWDPKRWRRPFTHPTRQLDTVKEGFQETTFIE 345          
BLAST of g.arboreum_cottongen_reftransV1_0002778 vs. ExPASy TrEMBL
Match: A0A068TXC8_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_6 OS=Coffea canephora GN=GSCOC_T00034436001 PE=4 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 1.166e-75
Identity = 108/156 (69.23%), Postives = 130/156 (83.33%), Query Frame = -3
Query:    2 DILRRSGVMYRHLVCKKNLTDIKDRSVHQRNVALSHIETHHLDGIVYFANEHNIYSIDLFEQMRHIRQFGTWPVAKQTSDKSRAVLEGPVCNGTQVIGWHLNGLSKRFQRFHAEMSGFAFNSTILWDPKPWHRPTLEPIRQLDTVEDGFHASSFIE 469
            DI+R++GVMYRHLV KKNLTDIKDR VHQRN AL HIE H LDGIVYFA++ NIYS++LFE +R I +FGTWPVA     K++A++EGPVCNG++VIGWH N  SKR +RFH +MSGFAFNS ILWDPK W RPT +PIRQLDTV++GF  ++FIE
Sbjct:  180 DIVRKTGVMYRHLVTKKNLTDIKDRGVHQRNTALEHIERHKLDGIVYFADDDNIYSLELFESLRAISRFGTWPVAMLAQSKNKAIMEGPVCNGSRVIGWHTNEKSKRLRRFHVDMSGFAFNSAILWDPKRWKRPTSDPIRQLDTVKEGFQETTFIE 335          
BLAST of g.arboreum_cottongen_reftransV1_0002778 vs. ExPASy Swiss-Prot
Match: IRX9H_ARATH (Probable beta-1,4-xylosyltransferase IRX9H OS=Arabidopsis thaliana GN=IRX9H PE=2 SV=2)

HSP 1 Score: 241.506 bits (615), Expect = 3.496e-77
Identity = 107/156 (68.59%), Postives = 128/156 (82.05%), Query Frame = -3
Query:    2 DILRRSGVMYRHLVCKKNLTDIKDRSVHQRNVALSHIETHHLDGIVYFANEHNIYSIDLFEQMRHIRQFGTWPVAKQTSDKSRAVLEGPVCNGTQVIGWHLNGLSKRFQRFHAEMSGFAFNSTILWDPKPWHRPTLEPIRQLDTVEDGFHASSFIE 469
            +ILR++GVMYRHLVCK+N+T IKDR VHQRN AL HIE H LDGIVYFA++ NIYS++LF+ +R I +FGTWPVA     K++A+LEGPVCNG+QVIGWH N  SKR +RFH +MSGFAFNSTILWDPK W RP   P RQLDTV++GF  +SFIE
Sbjct:  189 EILRKTGVMYRHLVCKRNMTSIKDRGVHQRNTALEHIELHKLDGIVYFADDDNIYSLELFQSLRQISRFGTWPVAMLAQSKNKAILEGPVCNGSQVIGWHTNEKSKRLRRFHVDMSGFAFNSTILWDPKRWRRPFSHPTRQLDTVKEGFQETSFIE 344          
BLAST of g.arboreum_cottongen_reftransV1_0002778 vs. ExPASy Swiss-Prot
Match: GT12_ORYSJ (Probable glucuronosyltransferase Os01g0675500 OS=Oryza sativa subsp. japonica GN=Os01g0675500 PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 2.841e-53
Identity = 88/156 (56.41%), Postives = 104/156 (66.67%), Query Frame = -3
Query:    2 DILRRSGVMYRHLVCKKNLTDIKDRSVHQRNVALSHIETHHLDGIVYFANEHNIYSIDLFEQMRHIRQFGTWPVAKQTSDKSRAVLEGPVCNGTQVIGWHLNGLSKRFQRFHAEMSGFAFNSTILWDPKPWHRPTLEPIRQLDTVEDGFHASSFIE 469
            +ILR SG+MYRHL+C +N T+I+   V Q+N A+ HI+ H LDGIV+FA+E   YS DLFE+MR IR+FGTWPVA     K R VLEGPVC G QV GWH N      +RF    SGFAFNSTILWDP+ W+ PTLE I        G   S FIE
Sbjct:  241 EILRSSGIMYRHLICNRNTTNIRKIVVCQKNNAIFHIKKHRLDGIVHFADEERAYSADLFEEMRKIRRFGTWPVAIHVGTKYRVVLEGPVCKGNQVTGWHTNQRRGVSRRFPIGFSGFAFNSTILWDPQRWNSPTLESIIVHSGGRGGLQESRFIE 396          
BLAST of g.arboreum_cottongen_reftransV1_0002778 vs. ExPASy Swiss-Prot
Match: GT52_ORYSJ (Probable glucuronosyltransferase Os05g0559600 OS=Oryza sativa subsp. japonica GN=Os05g0559600 PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 1.488e-48
Identity = 80/159 (50.31%), Postives = 107/159 (67.30%), Query Frame = -3
Query:    2 DILRRSGVMYRHLVCKKNLTDIKDRSVHQRNVALSHIETHHLDGIVYFANEHNIYSIDLFEQMRHIRQFGTWPVAKQTSDKSRAVLEGPVCNGTQVIGWH-LNGLSKR--FQRFHAEMSGFAFNSTILWDPKPWHRPTLEPIRQLDTVEDGFHASSFIE 469
            +ILR SGVMYRHL+C+KN T ++  +V QRN A+ HI+ H LDGI++FA+E   Y  D+FE+MR IR+FG WPVA  T  K R VLEGP+C G +V GW+ +  + K+   +RF    SGFAFNST+LWDP+ W+RP ++ +        G   S FIE
Sbjct:  243 EILRSSGVMYRHLICRKNTTSVRKIAVCQRNTAIYHIKKHRLDGIMHFADEERSYMSDVFEEMRKIRRFGAWPVAIHTGIKYRVVLEGPICKGNRVTGWNTIQNIQKKSAVRRFPVGFSGFAFNSTMLWDPERWNRPPMDSVIVHSGGRGGLQESRFIE 401          
BLAST of g.arboreum_cottongen_reftransV1_0002778 vs. ExPASy Swiss-Prot
Match: GT102_ORYSJ (Probable glucuronosyltransferase Os10g0205300 OS=Oryza sativa subsp. japonica GN=Os10g0205300 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 3.207e-47
Identity = 83/169 (49.11%), Postives = 102/169 (60.36%), Query Frame = -3
Query:    2 ILRRSGVMYRHLVCK--------------KNLTDIKDRSVHQRNVALSHIETHHLDGIVYFANEHNIYSIDLFEQMRHIRQFGTWPVAKQTSDKSRAVLEGPVCNGTQVIGWHLNGLSKRFQRFHAEMSGFAFNSTILWDPKPWHRPTLEPIRQLDTVEDGFHASSFIE 466
            +LR  GVMYRHL                 +      D    QRN AL HIE H L GIVYFA+E N+YS+DLF  +R IR FGTWPVA     KS+ +L+GPVC G++V+GWH    SK  +RFH +MSGFAFNS+ LWD K         IRQLDT ++GF  ++FIE
Sbjct:  126 LLRGCGVMYRHLSSPVPDAPQDRPRRRGRRQDRPAVDSRARQRNTALDHIEHHRLHGIVYFADEDNVYSLDLFYHLRDIRSFGTWPVATLAPGKSKTILQGPVCEGSRVVGWHTTDRSKNQRRFHVDMSGFAFNSSKLWDAKNRGHQAWNYIRQLDTAKEGFQETAFIE 294          
BLAST of g.arboreum_cottongen_reftransV1_0002778 vs. ExPASy Swiss-Prot
Match: IRX9_ARATH (Probable beta-1,4-xylosyltransferase IRX9 OS=Arabidopsis thaliana GN=IRX9 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 6.091e-41
Identity = 65/135 (48.15%), Postives = 96/135 (71.11%), Query Frame = -3
Query:   65 ILRRSGVMYRHLVCKKNLTDIKDRSVHQRNVALSHIETHHLDGIVYFANEHNIYSIDLFEQMRHIRQFGTWPVAKQTSDKSRAVLEGPVCNGTQVIGWHLNGLSKRFQ-RFHAEMSGFAFNSTILWDPKPWHRPT 466
            +LR++G+MYR +V K++ T ++    HQRN+AL HIE H L GIV+FA  +NIY +D F ++R I  FGTWP+A  ++++ R V+EGPVC  +QV+GWHL  ++   + +    +S FAFNS+ILWDP+ W RP+
Sbjct:  167 MLRKTGIMYRRIVFKEDFTSLESELDHQRNLALRHIEHHKLSGIVHFAGLNNIYDLDFFVKIRDIEVFGTWPMALLSANRKRVVVEGPVCESSQVLGWHLRKINNETETKPPIHISSFAFNSSILWDPERWGRPS 301          
BLAST of g.arboreum_cottongen_reftransV1_0002778 vs. ExPASy Swiss-Prot
Match: GT41_ORYSJ (Probable glucuronosyltransferase Os04g0103100 OS=Oryza sativa subsp. japonica GN=Os04g0103100 PE=2 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 5.160e-39
Identity = 67/155 (43.23%), Postives = 95/155 (61.29%), Query Frame = -3
Query:    2 LRRSGVMYRHLVCKKNL-TDIKDRSVHQRNVALSHIETHHLDGIVYFANEHNIYSIDLFEQMRHIRQFGTWPVAKQTSDKSRAVLEGPVCNGTQVIGWHLNGLSKRFQRFHAEMSGFAFNSTILWDPKPWHRPTLEPIRQLDTVEDGFHASSFIE 463
            LRR+ V++R++ C  N+     D   HQ N AL  ++ H LDG++YFA+E  +YS+ LF  +R IR+F TWPV + +   +  VL+GPVC   QV+GWH      + +RFH  MSGFAFNST+LWDPK         IR  + V++    S+F+E
Sbjct:  177 LRRTAVLHRYVGCCHNINASAPDFRPHQINAALDIVDNHRLDGVLYFADEEGVYSLHLFHHLRQIRRFATWPVPEISQHTNEVVLQGPVCKQGQVVGWHTTHDGNKLRRFHLAMSGFAFNSTMLWDPKLRSHLAWNSIRHPEMVKESLQGSAFVE 331          
BLAST of g.arboreum_cottongen_reftransV1_0002778 vs. ExPASy Swiss-Prot
Match: GT51_ORYSJ (Probable glucuronosyltransferase Os05g0123100 OS=Oryza sativa subsp. japonica GN=Os05g0123100 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.349e-35
Identity = 65/168 (38.69%), Postives = 97/168 (57.74%), Query Frame = -3
Query:   32 DILRRSGVMYRHLVCK--KNLTDIKDRSVHQRNVALSHIETHHLDGIVYFANEHNIYSIDLFEQMRHIRQFGTWPVAKQTSDKSRAVLEGPVCNGTQVIGW-------------------HLNGLSKRFQRFHA-EMSGFAFNSTILWDPKPWHRPTLEPIRQLDTVE 469
            ++LR +GVMYRHL  +  +N T     +  QRN AL+H+E H L G+V+FA+   +Y    F+++R I  FGTWPVA  ++ + + V+EGP+C+ ++V+GW                    LN       R H  ++SGFAFNS+ILWDP+ W RPT  P    D+++
Sbjct:  157 EVLRGTGVMYRHLAFRPEENFTTADAEAHAQRNAALAHVEKHRLSGVVHFADAAGVYDAHFFDEIRQIEAFGTWPVATMSAGEKKVVVEGPLCSDSKVVGWFSRDFNDGTTRAVTYNTEADLNPAGAAGTRAHTIDVSGFAFNSSILWDPERWGRPTSLPDTSQDSIK 324          
BLAST of g.arboreum_cottongen_reftransV1_0002778 vs. ExPASy Swiss-Prot
Match: GT32_ORYSJ (Probable glucuronosyltransferase Os03g0287800 OS=Oryza sativa subsp. japonica GN=Os03g0287800 PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 5.030e-33
Identity = 66/166 (39.76%), Postives = 93/166 (56.02%), Query Frame = -3
Query:   32 ILRRSGVMYRHLVCKKNLTDIKDRSV-----HQRNVALSHIETHHLDGIVYFANEHNIYSIDLFEQMRHIRQFGTWPVAKQTSDKSRAVLEGPVCNGTQVIGWHLNGLSKRFQRFHA---------------EMSGFAFNSTILWDPKPWHR-PTLEPIRQLDTVE 466
            +LR +G+MYRHL  K N T + D +      HQRNVAL HIE H L G+V FA   + + +  F+Q+R IR FG WPVA  + ++ + V++GP C+ + V GW    LS                       ++ GFAFNS++LWDP+ W R PT EP +  D+V+
Sbjct:  149 LLRTTGLMYRHLTYKDNFT-VADAAAGKERHHQRNVALGHIEHHRLAGVVLFAGLGDTFDLRFFDQLRQIRTFGAWPVATMSQNERKVVVQGPACSSSSVAGWFSMDLSNATSPVAVGGAGYGAAAARPRELDVHGFAFNSSVLWDPERWGRYPTSEPDKSQDSVK 313          
BLAST of g.arboreum_cottongen_reftransV1_0002778 vs. ExPASy Swiss-Prot
Match: GT71_ORYSJ (Probable glucuronosyltransferase Os07g0694400 OS=Oryza sativa subsp. japonica GN=Os07g0694400 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 5.420e-23
Identity = 59/167 (35.33%), Postives = 88/167 (52.69%), Query Frame = -3
Query:   32 ILRRSGVMYRHLVCKKNLTD----IKDRSVHQRNVALSHIETHHLDGIVYFANEHNIYSIDLFEQMRHIRQFGTWPVAKQTSDKSRAVLEGPVC---NGTQVI--GWHLNGLSKRFQRFHA------------EMSGFAFNSTILWDPKPWHR-PTLEPIRQLDTVE 466
            +LRR+GV++RHL+ K+   D    I  R   QRNVAL HIE H + G+V F    +IY + L   +R IR FG WPVA  ++ + + +++GP+C   + + VI  GW    +                     E+ GFAF+S +LWDP  W R P  +P    ++V+
Sbjct:  137 LLRRTGVVHRHLLMKQGDDDFSMQISMRREQQRNVALRHIEDHRIAGVVLFGGLADIYDLRLLHHLRDIRTFGAWPVATVSAYERKVMVQGPLCINTSSSSVITRGWFDMDMDMAAGGERRAAADRPPPETLMEVGGFAFSSWMLWDPHRWDRFPLSDPDASQESVK 303          
BLAST of g.arboreum_cottongen_reftransV1_0002778 vs. ExPASy Swiss-Prot
Match: GT11_ORYSJ (Probable glucuronosyltransferase Os01g0157700 OS=Oryza sativa subsp. japonica GN=Os01g0157700 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.857e-19
Identity = 42/100 (42.00%), Postives = 59/100 (59.00%), Query Frame = -3
Query:  170 LRRSGVMYRHLV-CKKNLTD-IKDRSVHQRNVALSHIETHHLDGIVYFANEHNIYSIDLFEQMRHIRQFGTWPVAKQTSDKSRAVLEGPVCNGTQVIGWH 463
            LR + VM+RHL    +N T    D   +Q NVALSHI+ H L G+V+FA   ++Y +  F+Q+R  R    WP+A  +S      LEGP CN +Q+ GW+
Sbjct:  123 LRGTRVMFRHLTYAAENFTGPAGDEVDYQMNVALSHIQLHRLPGVVHFAAASSVYDLRFFQQLRQTRGIAAWPIATVSSADQTVKLEGPTCNSSQITGWY 222          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0002778 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
M1BLG8_SOLTU4.737e-7770.51Uncharacterized protein OS=Solanum tuberosum GN=PG... [more]
A0A0B2PIP0_GLYSO8.418e-7767.31Putative beta-1,4-xylosyltransferase IRX9H OS=Glyc... [more]
A0A059BKY1_EUCGR4.707e-7671.79Uncharacterized protein OS=Eucalyptus grandis GN=E... [more]
R0ILI6_9BRAS9.275e-7668.59Uncharacterized protein OS=Capsella rubella GN=CAR... [more]
A0A068TXC8_COFCA1.166e-7569.23Coffea canephora DH200=94 genomic scaffold, scaffo... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0002778 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
IRX9H_ARATH3.496e-7768.59Probable beta-1,4-xylosyltransferase IRX9H OS=Arab... [more]
GT12_ORYSJ2.841e-5356.41Probable glucuronosyltransferase Os01g0675500 OS=O... [more]
GT52_ORYSJ1.488e-4850.31Probable glucuronosyltransferase Os05g0559600 OS=O... [more]
GT102_ORYSJ3.207e-4749.11Probable glucuronosyltransferase Os10g0205300 OS=O... [more]
IRX9_ARATH6.091e-4148.15Probable beta-1,4-xylosyltransferase IRX9 OS=Arabi... [more]
GT41_ORYSJ5.160e-3943.23Probable glucuronosyltransferase Os04g0103100 OS=O... [more]
GT51_ORYSJ1.349e-3538.69Probable glucuronosyltransferase Os05g0123100 OS=O... [more]
GT32_ORYSJ5.030e-3339.76Probable glucuronosyltransferase Os03g0287800 OS=O... [more]
GT71_ORYSJ5.420e-2335.33Probable glucuronosyltransferase Os07g0694400 OS=O... [more]
GT11_ORYSJ3.857e-1942.00Probable glucuronosyltransferase Os01g0157700 OS=O... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029044Nucleotide-diphospho-sugar transferasesGENE3D3.90.550.10coord: 1..148
e-value: 5.4E-46
score: 156.2
IPR029044Nucleotide-diphospho-sugar transferasesSUPERFAMILY53448Nucleotide-diphospho-sugar transferasescoord: 1..146
IPR005027Glycosyl transferase, family 43PFAMPF03360Glyco_transf_43coord: 1..147
e-value: 1.5E-41
score: 142.3
IPR005027Glycosyl transferase, family 43PANTHERPTHR10896GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASEcoord: 1..148
NoneNo IPR availablePANTHERPTHR10896:SF27SUBFAMILY NOT NAMEDcoord: 1..148

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0002778 ID=g.arboreum_cottongen_reftransV1_0002778; Name=g.arboreum_cottongen_reftransV1_0002778; organism=Gossypium arboreum; type=contig; length=471bp
GTTCAATAAATGAGCTTGCATGGAAACCATCTTCGACCGTGTCAAGCTGT
CTTATCGGTTCAAGAGTAGGTCGGTGCCATGGCTTTGGATCCCATAGTAT
GGTACTGTTGAAGGCAAACCCTGACATTTCAGCATGGAATCTTTGGAATC
GCTTGCTTAATCCATTTAGGTGCCATCCAATGACTTGAGTTCCATTACAA
ACAGGGCCTTCCAATACAGCTCTACTTTTGTCCGATGTTTGTTTGGCCAC
AGGCCAAGTCCCAAACTGCCTAATATGCCTCATTTGCTCAAAGAGATCAA
TTGAGTAGATGTTATGTTCATTGGCAAAGTAGACAATTCCATCAAGATGA
TGAGTTTCGATGTGAGATAGTGCCACATTTCTTTGGTGAACACTTCTGTC
TTTTATATCAGTCAGATTTTTCTTGCAGACAAGATGCCTATACATAACAC
CGCTCCTTCTTAGGATGTCAG
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR029044Nucleotide-diphossugar_trans
IPR005027Glyco_trans_43
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0015018galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity