g.arboreum_cottongen_reftransV1_0002778, g.arboreum_cottongen_reftransV1_0002778 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0002778
Unique Nameg.arboreum_cottongen_reftransV1_0002778
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length471
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr1chromosomeg.arboreum_cottongen_reftransV1_0002778:1..471 .
Chr1:59000790..59001730 -
n/a
Homology
BLAST of g.arboreum_cottongen_reftransV1_0002778 vs. ExPASy TrEMBL
Match: M5XC47_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005926mg PE=4 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 2.123e-83
Identity = 119/156 (76.28%), Postives = 137/156 (87.82%), Query Frame = -3
Query:    2 DILRRSGVMYRHLVCKKNLTDIKDRSVHQRNVALSHIETHHLDGIVYFANEHNIYSIDLFEQMRHIRQFGTWPVAKQTSDKSRAVLEGPVCNGTQVIGWHLNGLSKRFQRFHAEMSGFAFNSTILWDPKPWHRPTLEPIRQLDTVEDGFHASSFIE 469
            DIL+R+G+MYRHLVC  NLTD++DRSVHQRNVALSHIETH LDGIVYFA+E N+YS DLFEQMR IR+FGTW VAK  S K + ++EGPVCNGTQVIGWH+N  S+RFQRFHA++SGFAFNS+ILWDPK WHRPTLEPIRQL+T  D F AS+FIE
Sbjct:  232 DILKRTGIMYRHLVCNNNLTDVRDRSVHQRNVALSHIETHRLDGIVYFADEDNVYSTDLFEQMRQIRRFGTWTVAKLMSGKMKPIIEGPVCNGTQVIGWHVNESSRRFQRFHAKISGFAFNSSILWDPKGWHRPTLEPIRQLETDNDDFKASTFIE 387          
BLAST of g.arboreum_cottongen_reftransV1_0002778 vs. ExPASy TrEMBL
Match: A0A067GJ77_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g013438mg PE=4 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 2.779e-83
Identity = 117/156 (75.00%), Postives = 137/156 (87.82%), Query Frame = -3
Query:    2 DILRRSGVMYRHLVCKKNLTDIKDRSVHQRNVALSHIETHHLDGIVYFANEHNIYSIDLFEQMRHIRQFGTWPVAKQTSDKSRAVLEGPVCNGTQVIGWHLNGLSKRFQRFHAEMSGFAFNSTILWDPKPWHRPTLEPIRQLDTVEDGFHASSFIE 469
            D+LRR+GVMYRHLVCKKNLTD+KD  VHQRNVALSHIE HHLDGIVYFA+E+NIY  DLFE++R IR+FGTW V K + +K   +LEGP+CNGT+VIGWH+N   +RF+RFHAEMSGFAFNSTILWDPK WHRPTLEPIRQ+ TV+DGF AS+F+E
Sbjct:  235 DVLRRTGVMYRHLVCKKNLTDVKDTRVHQRNVALSHIENHHLDGIVYFADENNIYLTDLFEELRQIRRFGTWTVGKLSENKMDTILEGPICNGTRVIGWHVNEPRERFRRFHAEMSGFAFNSTILWDPKRWHRPTLEPIRQVVTVKDGFQASTFVE 390          
BLAST of g.arboreum_cottongen_reftransV1_0002778 vs. ExPASy TrEMBL
Match: B9RS38_RICCO (Beta-1,3-glucuronyltransferase, putative OS=Ricinus communis GN=RCOM_0802770 PE=4 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 1.017e-82
Identity = 118/156 (75.64%), Postives = 136/156 (87.18%), Query Frame = -3
Query:    2 DILRRSGVMYRHLVCKKNLTDIKDRSVHQRNVALSHIETHHLDGIVYFANEHNIYSIDLFEQMRHIRQFGTWPVAKQTSDKSRAVLEGPVCNGTQVIGWHLNGLSKRFQRFHAEMSGFAFNSTILWDPKPWHRPTLEPIRQLDTVEDGFHASSFIE 469
            DILRR+GVMYRHL+CKKN+TDIKD S+HQRNVALSHIETHHLDGIVYFA++ NIY  DLFE+MR +R+FGTW VAK T DKS+  LEGP+CNG++VIGWH+N  S+RF+RFHA+MSGFAFNSTILWD K W RPTLEPIR LDT  DGF  S+FIE
Sbjct:  233 DILRRTGVMYRHLICKKNVTDIKDGSIHQRNVALSHIETHHLDGIVYFADDDNIYLADLFEKMREMRRFGTWTVAKVTGDKSKGFLEGPICNGSRVIGWHVNEPSRRFRRFHADMSGFAFNSTILWDQKRWRRPTLEPIRLLDTFRDGFQVSTFIE 388          
BLAST of g.arboreum_cottongen_reftransV1_0002778 vs. ExPASy TrEMBL
Match: D7SUC2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g03610 PE=4 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 1.315e-82
Identity = 117/156 (75.00%), Postives = 135/156 (86.54%), Query Frame = -3
Query:    2 DILRRSGVMYRHLVCKKNLTDIKDRSVHQRNVALSHIETHHLDGIVYFANEHNIYSIDLFEQMRHIRQFGTWPVAKQTSDKSRAVLEGPVCNGTQVIGWHLNGLSKRFQRFHAEMSGFAFNSTILWDPKPWHRPTLEPIRQLDTVEDGFHASSFIE 469
            D+L R+GVMYRHL+C KNLTDIKDR VH RN ALSHIETH LDG VYFA++ NIYS+DLFEQ+R IR+FGTW VAK    KS+ +LEGPVCNG+QVIGWH N +++RF+RFH EMSGFAFNSTILWDPK WHRPTLEPIRQLDTV++GF  S+FIE
Sbjct:  243 DMLMRTGVMYRHLMCNKNLTDIKDRGVHLRNTALSHIETHRLDGTVYFADDDNIYSVDLFEQIRQIRRFGTWTVAKLMESKSKTLLEGPVCNGSQVIGWHTNEMTRRFRRFHTEMSGFAFNSTILWDPKRWHRPTLEPIRQLDTVKEGFQVSTFIE 398          
BLAST of g.arboreum_cottongen_reftransV1_0002778 vs. ExPASy TrEMBL
Match: W9RC65_9ROSA (Putative beta-1,4-xylosyltransferase IRX9H OS=Morus notabilis GN=L484_007250 PE=4 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 2.507e-80
Identity = 116/156 (74.36%), Postives = 135/156 (86.54%), Query Frame = -3
Query:    2 DILRRSGVMYRHLVCKKNLTDIKDRSVHQRNVALSHIETHHLDGIVYFANEHNIYSIDLFEQMRHIRQFGTWPVAKQTSDKSRAVLEGPVCNGTQVIGWHLNGLSKRFQRFHAEMSGFAFNSTILWDPKPWHRPTLEPIRQLDTVEDGFHASSFIE 469
            D+LRR+GVMYRHLVC  NLTD++DR VHQRNVALSHIETHHLDGIVYFA++ NIY+ DLFEQMR IR+FG W VAK   +K+ AVLEGPVCNGT+V+GWH+NGL  RF+RFHAE+SGFAFNSTILWDPK WHRP LEPIRQ DT+++    S+FIE
Sbjct:  249 DLLRRTGVMYRHLVCNVNLTDVRDRRVHQRNVALSHIETHHLDGIVYFADDDNIYTADLFEQMRQIRRFGVWTVAK-VENKNIAVLEGPVCNGTKVLGWHINGLRWRFRRFHAEISGFAFNSTILWDPKRWHRPMLEPIRQRDTIKEALQVSTFIE 403          
BLAST of g.arboreum_cottongen_reftransV1_0002778 vs. ExPASy TrEMBL
Match: Q7XHJ8_SOLLC (Beta3-glucuronyltransferase (Fragment) OS=Solanum lycopersicum GN=pglcat1 PE=2 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 9.968e-80
Identity = 111/156 (71.15%), Postives = 132/156 (84.62%), Query Frame = -3
Query:    2 DILRRSGVMYRHLVCKKNLTDIKDRSVHQRNVALSHIETHHLDGIVYFANEHNIYSIDLFEQMRHIRQFGTWPVAKQTSDKSRAVLEGPVCNGTQVIGWHLNGLSKRFQRFHAEMSGFAFNSTILWDPKPWHRPTLEPIRQLDTVEDGFHASSFIE 469
            DILR++GVMYRHLVC KN+TDIKDR VHQRNVAL HIE H L+GIVYFA++ NIYS++LFE +R I +FGTWPVA     KS+A+LEGPVCNG+QVIGWH N  SK+ +RFH +MSGFAFNSTILWDPK WHRPT +PIRQLD V++GF  ++FIE
Sbjct:   55 DILRKTGVMYRHLVCSKNMTDIKDRGVHQRNVALEHIEHHRLNGIVYFADDDNIYSLELFESIRSINRFGTWPVAMLAQSKSKAILEGPVCNGSQVIGWHTNEKSKQLRRFHVDMSGFAFNSTILWDPKKWHRPTSDPIRQLDNVKEGFQETTFIE 210          
BLAST of g.arboreum_cottongen_reftransV1_0002778 vs. ExPASy TrEMBL
Match: K4BUC9_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc04g076920.2 PE=4 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 3.226e-79
Identity = 111/156 (71.15%), Postives = 132/156 (84.62%), Query Frame = -3
Query:    2 DILRRSGVMYRHLVCKKNLTDIKDRSVHQRNVALSHIETHHLDGIVYFANEHNIYSIDLFEQMRHIRQFGTWPVAKQTSDKSRAVLEGPVCNGTQVIGWHLNGLSKRFQRFHAEMSGFAFNSTILWDPKPWHRPTLEPIRQLDTVEDGFHASSFIE 469
            DILR++GVMYRHLVC KN+TDIKDR VHQRNVAL HIE H L+GIVYFA++ NIYS++LFE +R I +FGTWPVA     KS+A+LEGPVCNG+QVIGWH N  SK+ +RFH +MSGFAFNSTILWDPK WHRPT +PIRQLD V++GF  ++FIE
Sbjct:  114 DILRKTGVMYRHLVCSKNMTDIKDRGVHQRNVALEHIEHHRLNGIVYFADDDNIYSLELFESIRSINRFGTWPVAMLAQSKSKAILEGPVCNGSQVIGWHTNEKSKQLRRFHVDMSGFAFNSTILWDPKKWHRPTSDPIRQLDNVKEGFQETTFIE 269          
BLAST of g.arboreum_cottongen_reftransV1_0002778 vs. ExPASy TrEMBL
Match: M1A7G6_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400006379 PE=4 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 5.521e-78
Identity = 110/156 (70.51%), Postives = 131/156 (83.97%), Query Frame = -3
Query:    2 DILRRSGVMYRHLVCKKNLTDIKDRSVHQRNVALSHIETHHLDGIVYFANEHNIYSIDLFEQMRHIRQFGTWPVAKQTSDKSRAVLEGPVCNGTQVIGWHLNGLSKRFQRFHAEMSGFAFNSTILWDPKPWHRPTLEPIRQLDTVEDGFHASSFIE 469
            DILR++GVMYRHLVC KN+T IKDR VHQRNVAL HIE H L+GIVYFA++ NIYS++LFE +R I +FGTWPVA     KS+A+LEGPVCNG+QVIGWH N  SK+ +RFH +MSGFAFNSTILWDPK WHRPT +PIRQLD V++GF  ++FIE
Sbjct:  113 DILRKTGVMYRHLVCSKNMTYIKDRGVHQRNVALEHIEHHRLNGIVYFADDDNIYSLELFESIRSINRFGTWPVAMLAQSKSKAILEGPVCNGSQVIGWHTNEKSKQLRRFHVDMSGFAFNSTILWDPKKWHRPTSDPIRQLDNVKEGFQETTFIE 268          
BLAST of g.arboreum_cottongen_reftransV1_0002778 vs. ExPASy TrEMBL
Match: K4CM67_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc08g068430.2 PE=4 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 1.891e-77
Identity = 109/156 (69.87%), Postives = 131/156 (83.97%), Query Frame = -3
Query:    2 DILRRSGVMYRHLVCKKNLTDIKDRSVHQRNVALSHIETHHLDGIVYFANEHNIYSIDLFEQMRHIRQFGTWPVAKQTSDKSRAVLEGPVCNGTQVIGWHLNGLSKRFQRFHAEMSGFAFNSTILWDPKPWHRPTLEPIRQLDTVEDGFHASSFIE 469
            DILRR+GVMYRHLVC KNLTD+K+++VH RNVALSHIETHHLDGIVYFA+E+NIYS D+FEQMR I + GTW VA+   +  + +L+GP+CNG+QVIGWH  G +KRFQRF+AE+SGFAFNSTILWD K WHRPTLEPIRQ +T +     S+FIE
Sbjct:  196 DILRRTGVMYRHLVCSKNLTDVKEKNVHLRNVALSHIETHHLDGIVYFADEYNIYSADVFEQMRQISRIGTWIVARLAENNRKVILQGPICNGSQVIGWHTEGRTKRFQRFYAEISGFAFNSTILWDTKRWHRPTLEPIRQSNTAKASSQVSTFIE 351          
BLAST of g.arboreum_cottongen_reftransV1_0002778 vs. ExPASy TrEMBL
Match: A0A0A0LE43_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G893450 PE=4 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 3.158e-77
Identity = 110/156 (70.51%), Postives = 133/156 (85.26%), Query Frame = -3
Query:    2 DILRRSGVMYRHLVCKKNLTDIKDRSVHQRNVALSHIETHHLDGIVYFANEHNIYSIDLFEQMRHIRQFGTWPVAKQTSDKSRAVLEGPVCNGTQVIGWHLNGLSKRFQRFHAEMSGFAFNSTILWDPKPWHRPTLEPIRQLDTVEDGFHASSFIE 469
            +ILR++GVMYRHLVC KN+TD+KDR VHQRNVAL HIE H LDGIVYFA++ NIYS++LF+ +R I +FGTWPVA    +K++AVLEGPVCNG+QVIGWH N  SKR +RFH +MSGFAFNSTILWDPK W RPT +PIRQLDTV++GF  ++FIE
Sbjct:  202 EILRKTGVMYRHLVCTKNMTDVKDRGVHQRNVALQHIERHKLDGIVYFADDDNIYSLELFDSLRDISRFGTWPVAMLAQNKNKAVLEGPVCNGSQVIGWHTNEKSKRLRRFHVDMSGFAFNSTILWDPKRWRRPTSKPIRQLDTVKEGFQETTFIE 357          
BLAST of g.arboreum_cottongen_reftransV1_0002778 vs. ExPASy Swiss-Prot
Match: IRX14_ARATH (Probable beta-1,4-xylosyltransferase IRX14 OS=Arabidopsis thaliana GN=IRX14 PE=2 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 1.807e-9
Identity = 49/167 (29.34%), Postives = 79/167 (47.31%), Query Frame = -3
Query:   89 ILRRSGVMYRHLVCKKNLTDI-KDRS---VHQRNVALSHIETHHLDGIVYFANEHNIYSIDLFEQMRHIRQFGTWPVA--KQTSDKSRAVL---------------------EGPVCNGT-QVIGWHL------NGLSKRFQRFHA-------EMSGFAFNSTILWD 466
            I+ +SG+   H+   + + +  +DRS   V  R  AL  +    LDGIV FA++ N++S++LF+++++++ FGT  V     + +    VL                     +GP CN T Q+IGWH+       G S  +    A       E SGF  NS +LW+
Sbjct:  209 IIAKSGLRTIHVGIDQRMPNTWEDRSKLEVFMRLQALRVVREEKLDGIVMFADDSNMHSMELFDEIQNVKWFGTVSVGILAHSGNAEEMVLSMEKRKEMEKEEEEESSSLPVQGPACNSTDQLIGWHIFNTLPYAGKSAVYIDDVAAVLPQKLEWSGFVLNSRLLWE 375          
BLAST of g.arboreum_cottongen_reftransV1_0002778 vs. ExPASy Swiss-Prot
Match: GT43_ORYSJ (Probable glucuronosyltransferase Os04g0650300 OS=Oryza sativa subsp. japonica GN=Os04g0650300 PE=3 SV=1)

HSP 1 Score: 56.225 bits (134), Expect = 1.403e-8
Identity = 45/169 (26.63%), Postives = 77/169 (45.56%), Query Frame = -3
Query:    8 ILRRSGVMYRHLVCKKNLTDIKDRSVHQRNVALSHIETHHLDGIVYFANEHNIYSIDLFEQMRHIRQFGTWPVAKQTSDK--SRAVLEGPVCNGT-QVIGWHLNG------------LSKRFQRFHAEMSGFAFNSTILWD-PKPWHRPTLEPIRQLDTVEDGFHASSF 466
            +L RS + + H+    + T         R  AL  I    +DG+V FA+E++I   +LF++ + ++  G  PV     D+  S   L+ P C+   +++G+H++             LS R      E +GF  N+  LW+      RP  E +  +D ++DG  AS  
Sbjct:  219 VLSRSNLNFLHITGPDSSTS------RLRMHALREIRKRKMDGVVVFADENSILRTELFDEAQKVKSVGAVPVGVLGEDEGTSETFLQAPSCDAEGKLVGYHVSEETMLPANRGDMLLSSRL-----EWAGFVVNAQALWEGGGAASRP--EWVSDIDAIDDGAAASPL 374          
BLAST of g.arboreum_cottongen_reftransV1_0002778 vs. ExPASy Swiss-Prot
Match: B3GA3_MOUSE (Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3 OS=Mus musculus GN=B3gat3 PE=2 SV=1)

HSP 1 Score: 56.225 bits (134), Expect = 1.404e-8
Identity = 42/146 (28.77%), Postives = 64/146 (43.84%), Query Frame = -3
Query:   95 ILRRSGVMYRHLVC----KKNLTD-----IKDRSVHQRNVALSHIE-------------THHLDGIVYFANEHNIYSIDLFEQMRHIRQFGTWPVAKQTSDKSRAVLEGPVCNGTQVIGWHLNGLSKRFQRFHAEMSGFAFNSTIL 466
            +L  SG+++ HL       + L +     ++ R V QRN AL  +                   G+VYFA++ N YS +LF++MR  R    WPV      +     EGP     +V+G+H      R   F  +M+GFA    +L
Sbjct:  124 LLAASGLLFTHLAVLTPKAQRLREGEPGWVRPRGVEQRNKALDWLRGKGGAVGGEKDPPPPGTQGVVYFADDDNTYSRELFKEMRWTRGVSVWPVGLVGGLR----FEGPQVQDGRVVGFHTAWEPNR--PFPLDMAGFAVALPLL 263          
BLAST of g.arboreum_cottongen_reftransV1_0002778 vs. ExPASy Swiss-Prot
Match: B3GA3_CRIGR (Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3 OS=Cricetulus griseus GN=B3GAT3 PE=2 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 1.676e-8
Identity = 42/146 (28.77%), Postives = 64/146 (43.84%), Query Frame = -3
Query:   95 ILRRSGVMYRHLVC----KKNLTD-----IKDRSVHQRNVALSHIETHH-------------LDGIVYFANEHNIYSIDLFEQMRHIRQFGTWPVAKQTSDKSRAVLEGPVCNGTQVIGWHLNGLSKRFQRFHAEMSGFAFNSTIL 466
            +L  SG+++ HL       + L +     ++ R V QRN AL  +                   G+VYFA++ N YS +LF++MR  R    WPV      +     EGP     +V+G+H      R   F  +M+GFA    +L
Sbjct:  124 LLAASGLLFTHLAVLTPKAQRLREGEPGWVRPRGVEQRNKALDWLRGKGGAVGGEKDPPPPGTQGVVYFADDDNTYSRELFKEMRWTRGVSVWPVGLVGGLR----FEGPRVQDGRVVGFHTAWEPNR--PFPLDMAGFAVALPLL 263          
BLAST of g.arboreum_cottongen_reftransV1_0002778 vs. ExPASy Swiss-Prot
Match: IX14H_ARATH (Probable beta-1,4-xylosyltransferase IRX14H OS=Arabidopsis thaliana GN=IRX14H PE=2 SV=1)

HSP 1 Score: 56.225 bits (134), Expect = 1.773e-8
Identity = 37/150 (24.67%), Postives = 69/150 (46.00%), Query Frame = -3
Query:   23 ALSHIETHHLDGIVYFANEHNIYSIDLFEQMRHIRQFGTWPVA-------------------KQTSDKSRAVLEGPVCNGTQ-VIGWHL---NGLSKRFQRF----------HAEMSGFAFNSTILWDPKPWHRPTLEPIRQLDTVEDGF 373
            AL  +    LDGIV FA++ N++S++LF++++ ++ FG   V                     +  +K    ++GP CN ++ ++GWH+      +K+   +            E SGF  NS +LW      +P    ++ L  ++DG+
Sbjct:  236 ALRVVREKKLDGIVMFADDSNMHSMELFDEIQTVKWFGALSVGILAHSGNADELSSILKNEQGKNKEKPSMPIQGPSCNSSEKLVGWHIFNTQPYAKKTAVYIDEKAPVMPSKMEWSGFVLNSRLLWKESLDDKPAW--VKDLSLLDDGY 383          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0002778 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
M5XC47_PRUPE2.123e-8376.28Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
A0A067GJ77_CITSI2.779e-8375.00Uncharacterized protein OS=Citrus sinensis GN=CISI... [more]
B9RS38_RICCO1.017e-8275.64Beta-1,3-glucuronyltransferase, putative OS=Ricinu... [more]
D7SUC2_VITVI1.315e-8275.00Putative uncharacterized protein OS=Vitis vinifera... [more]
W9RC65_9ROSA2.507e-8074.36Putative beta-1,4-xylosyltransferase IRX9H OS=Moru... [more]
Q7XHJ8_SOLLC9.968e-8071.15Beta3-glucuronyltransferase (Fragment) OS=Solanum ... [more]
K4BUC9_SOLLC3.226e-7971.15Uncharacterized protein OS=Solanum lycopersicum GN... [more]
M1A7G6_SOLTU5.521e-7870.51Uncharacterized protein OS=Solanum tuberosum GN=PG... [more]
K4CM67_SOLLC1.891e-7769.87Uncharacterized protein OS=Solanum lycopersicum GN... [more]
A0A0A0LE43_CUCSA3.158e-7770.51Uncharacterized protein OS=Cucumis sativus GN=Csa_... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0002778 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
IRX14_ARATH1.807e-929.34Probable beta-1,4-xylosyltransferase IRX14 OS=Arab... [more]
GT43_ORYSJ1.403e-826.63Probable glucuronosyltransferase Os04g0650300 OS=O... [more]
B3GA3_MOUSE1.404e-828.77Galactosylgalactosylxylosylprotein 3-beta-glucuron... [more]
B3GA3_CRIGR1.676e-828.77Galactosylgalactosylxylosylprotein 3-beta-glucuron... [more]
IX14H_ARATH1.773e-824.67Probable beta-1,4-xylosyltransferase IRX14H OS=Ara... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029044Nucleotide-diphospho-sugar transferasesGENE3D3.90.550.10coord: 1..148
e-value: 5.4E-46
score: 156.2
IPR029044Nucleotide-diphospho-sugar transferasesSUPERFAMILY53448Nucleotide-diphospho-sugar transferasescoord: 1..146
IPR005027Glycosyl transferase, family 43PFAMPF03360Glyco_transf_43coord: 1..147
e-value: 1.5E-41
score: 142.3
IPR005027Glycosyl transferase, family 43PANTHERPTHR10896GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASEcoord: 1..148
NoneNo IPR availablePANTHERPTHR10896:SF27SUBFAMILY NOT NAMEDcoord: 1..148

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0002778 ID=g.arboreum_cottongen_reftransV1_0002778; Name=g.arboreum_cottongen_reftransV1_0002778; organism=Gossypium arboreum; type=contig; length=471bp
GTTCAATAAATGAGCTTGCATGGAAACCATCTTCGACCGTGTCAAGCTGT
CTTATCGGTTCAAGAGTAGGTCGGTGCCATGGCTTTGGATCCCATAGTAT
GGTACTGTTGAAGGCAAACCCTGACATTTCAGCATGGAATCTTTGGAATC
GCTTGCTTAATCCATTTAGGTGCCATCCAATGACTTGAGTTCCATTACAA
ACAGGGCCTTCCAATACAGCTCTACTTTTGTCCGATGTTTGTTTGGCCAC
AGGCCAAGTCCCAAACTGCCTAATATGCCTCATTTGCTCAAAGAGATCAA
TTGAGTAGATGTTATGTTCATTGGCAAAGTAGACAATTCCATCAAGATGA
TGAGTTTCGATGTGAGATAGTGCCACATTTCTTTGGTGAACACTTCTGTC
TTTTATATCAGTCAGATTTTTCTTGCAGACAAGATGCCTATACATAACAC
CGCTCCTTCTTAGGATGTCAG
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR029044Nucleotide-diphossugar_trans
IPR005027Glyco_trans_43
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0015018galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity