g.arboreum_cottongen_reftransV1_0021561, g.arboreum_cottongen_reftransV1_0021561 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0021561
Unique Nameg.arboreum_cottongen_reftransV1_0021561
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length2287
Homology
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy TrEMBL
Match: A0A0A0LB48_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G585900 PE=4 SV=1)

HSP 1 Score: 795.808 bits (2054), Expect = 0.000e+0
Identity = 426/546 (78.02%), Postives = 466/546 (85.35%), Query Frame = -2
Query:  556 MSMNGNNPPKNLG-ASSSPFGNAGMVPPPMPGNP-AFSQ----AQLSAGFX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGLSLNQAQNAGFGTLXXXXXXXXXXXXXXAKRILQXXXXXXXXXXXMNTMSPLRTMELTAAARRKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPQKPNAEPPTWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLYPDNHIIIWEHARSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKMVAGEPSRSAEKERRSDFFNQSWVEDAVIRYLNRKPPAGSDAPGS 2160
            MSMN NNPPK LG ASSSPFGN+GMVPP M  N  +FSQ    AQL AGFQ        Q+                  AHAQ QA LQAQGLSL Q+QN G G +GS SP  STPG A  KRI Q+PP+RPP +    T SPL+TMELT AAR+KKQKLPEKQLQD+VAAILPESALYTQLLEFE+RVDAALARKKVDI EALKNPPC+QKTLRIYVFNTFANQ+ TIP+KPNA+PPTWTLKIIGRILEDG+DPD PG VQR+NPLYPKFSSFFKRVTISLDQ+LYPD+HII+WE+ARSP P+EGFEVKRKGDKEF+VNIRLEMNY+PEKFKLS ALMEVLGIEVDTRPRIIAAIWHYVKARKLQNP DPSFF+CD  LQKVFGED++KFTMVSQ+ISQHL PP PIHLEHK+KLSGNSPAG ACYDVLVDVPFPI RELSALLAN EK+KEIDACDEAIC  IRKIH+H RRRAFFLGFSQSPVEFI+AL++SQS+DLK++AGE SR+AEKERRSDFFNQ WVEDAVIRY+NRKP  GSDAPGS
Sbjct:    1 MSMNNNNPPKTLGGASSSPFGNSGMVPPSMAANSTSFSQPQPQAQLGAGFQNPFPLTTAQVLAQAQYKAHAHAQAQAQAAHAQFQAQLQAQGLSLTQSQNVGGGNVGSPSPGFSTPGLAGVKRIPQKPPVRPPILSPGTTFSPLKTMELTPAARKKKQKLPEKQLQDKVAAILPESALYTQLLEFESRVDAALARKKVDIHEALKNPPCIQKTLRIYVFNTFANQVNTIPKKPNADPPTWTLKIIGRILEDGIDPDHPGVVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIVWENARSPAPHEGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPNDPSFFHCDPPLQKVFGEDKLKFTMVSQRISQHLFPPQPIHLEHKVKLSGNSPAGTACYDVLVDVPFPIHRELSALLANAEKNKEIDACDEAICTAIRKIHEHRRRRAFFLGFSQSPVEFIDALIESQSKDLKLLAGEASRNAEKERRSDFFNQPWVEDAVIRYINRKPATGSDAPGS 546          
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy TrEMBL
Match: A0A0B0MFQ5_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_10982 PE=4 SV=1)

HSP 1 Score: 795.038 bits (2052), Expect = 0.000e+0
Identity = 451/536 (84.14%), Postives = 484/536 (90.30%), Query Frame = -2
Query:  556 MSMNGNNPPKNLGASSSPFGNAGMVPPPMPGNPAFSQAQLSAGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGLSLNQAQNAGFGTLXXXXXXXXXXXXXXAKRILQXXXXXXXXXXXMNTMSPLRTMELTAAARRKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPQKPNAEPPTWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLYPDNHIIIWEHARSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKMVAGEPSRSAEKERRSDFFNQSWVEDAVIRYLNRKPPA-GSDAPGS 2160
            MS+N NNPPK++GASSSPFGNA           A +QAQLSAGFQ QYQLSQAQALA AQ++AQAQ              GLSLNQAQNAG G LG+SSPSMSTPGSASAKRILQRPPMRPPGVP+ NTMSPLRTM+LT AAR+KKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAAL RKKVDIQEALKNPPCVQKTLRIYVFNTFANQ++TIP+KPNAEPPTWTLKIIGRILEDGVDPDQP FVQ+TNPLYPKFSSFFKRVTISLDQ+LYP+NHIIIWE ARSP P+EGF+VKRKGDKEFTVNIRLEMNY PEKFKLSSAL+EVLGIEVDTRPRIIAAIWHYVKARKLQNP DPS FNCDAQL KVFGE++VKFTMVSQKISQHLS PPPIHLEHKIKLSGN+PAG+ACYDVLVDVP PIQR+LSALLAN EKSKEI+ CDEAICA IRKIH+H RRRAFFLGFSQSPVEFINAL++SQS+DLK+ +GE SRS+E+ERRSDFFNQ WVEDAVIRYLNRKP A GSDAPGS
Sbjct:    1 MSVNNNNPPKSIGASSSPFGNASQ---------AQTQAQLSAGFQNQYQLSQAQALAHAQAQAQAQLAHAQFQAHLQAQ-GLSLNQAQNAGIGNLGTSSPSMSTPGSASAKRILQRPPMRPPGVPVTNTMSPLRTMDLTTAARKKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALTRKKVDIQEALKNPPCVQKTLRIYVFNTFANQMQTIPKKPNAEPPTWTLKIIGRILEDGVDPDQPAFVQKTNPLYPKFSSFFKRVTISLDQRLYPENHIIIWEQARSPAPHEGFDVKRKGDKEFTVNIRLEMNYAPEKFKLSSALVEVLGIEVDTRPRIIAAIWHYVKARKLQNPNDPSCFNCDAQLMKVFGEEKVKFTMVSQKISQHLSSPPPIHLEHKIKLSGNNPAGSACYDVLVDVPLPIQRDLSALLANAEKSKEIEQCDEAICAAIRKIHEHRRRRAFFLGFSQSPVEFINALIESQSRDLKLASGEASRSSERERRSDFFNQPWVEDAVIRYLNRKPGAGGSDAPGS 526          
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy TrEMBL
Match: B9GJS7_POPTR (SWIB complex BAF60b domain-containing family protein OS=Populus trichocarpa GN=POPTR_0001s33890g PE=4 SV=1)

HSP 1 Score: 792.727 bits (2046), Expect = 0.000e+0
Identity = 424/544 (77.94%), Postives = 464/544 (85.29%), Query Frame = -2
Query:  553 PPKNLGASSSPFGNAGMVPPPMPGNPAF--SQAQLSAGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ-------------GLSLNQAQNAGFGTLXXXXXXXXXXXXXXAKRILQXXXXXXXXXXXMNTMSPLRTMELTAAARRKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPQKPNAEPPTWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLYPDNHIIIWEHARSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKMVAGEPSRSAEKERRSDFFNQSWVEDAVIRYLNRKPPAGSDAPGSI 2139
            PPK+LG SSSPFGN+GMV P M  NP F  +QAQ+ AGFQ                    QA A AQ     Q Q             G+SLNQ Q+AG G LGSSSPS STPG+ASAKR+ Q+P  RPPGVPM + +SPL+ M+L++AARRKKQKLPEKQLQDRVAAILPESALYTQLLEFE RVDAALARKKVDIQEALK+PPCVQKTLRIYVFNTFANQI+TIP+KPNA+PPTWTLK+IGRILEDGVDPDQPG VQ++NPLYPKFSSFFKRV+I LDQ+LYPDNHIIIWEHARSP P+EGFEVKRKGDKEF+VNIRLEMNYVPEKFKLS ALMEVLGIEV+TRPRIIAAIWHYVKARKLQNP DPSFFNCDA LQKVFGE ++KFTMVSQ+ISQHLSPP PIHLEHKIKLSGNSPAG  CYDV+VDVPFPIQRELSALLAN EK+KEID CDEAIC  IRKIH+H RRRAFFLGFSQSPVEF+NAL++SQS+DLK+VAGE SR+AEKERRSDFFNQ WVEDAVIRYLNRKP AGSDAP S+
Sbjct:   12 PPKSLGQSSSPFGNSGMVNPSMGANPTFPQAQAQMGAGFQGGQFQLSQAQATLQAHLKAQQAHAQAQAAHAAQVQAAHAQFQAQLQAQGVSLNQNQSAGIGNLGSSSPSFSTPGNASAKRLPQKPLGRPPGVPMSSMVSPLKPMDLSSAARRKKQKLPEKQLQDRVAAILPESALYTQLLEFETRVDAALARKKVDIQEALKSPPCVQKTLRIYVFNTFANQIRTIPKKPNADPPTWTLKVIGRILEDGVDPDQPGAVQKSNPLYPKFSSFFKRVSIQLDQRLYPDNHIIIWEHARSPAPHEGFEVKRKGDKEFSVNIRLEMNYVPEKFKLSPALMEVLGIEVETRPRIIAAIWHYVKARKLQNPEDPSFFNCDAPLQKVFGESKMKFTMVSQRISQHLSPPQPIHLEHKIKLSGNSPAGTVCYDVVVDVPFPIQRELSALLANAEKNKEIDTCDEAICTAIRKIHEHRRRRAFFLGFSQSPVEFVNALIESQSKDLKLVAGEASRNAEKERRSDFFNQPWVEDAVIRYLNRKPAAGSDAPRSM 555          
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy TrEMBL
Match: A0A061EEG0_THECC (Chromatin remodeling complex subunit isoform 2 OS=Theobroma cacao GN=TCM_017181 PE=4 SV=1)

HSP 1 Score: 792.727 bits (2046), Expect = 0.000e+0
Identity = 393/425 (92.47%), Postives = 409/425 (96.24%), Query Frame = -2
Query:  556 KRILQXXXXXXXXXXXMNTMSPLRTMELTAAARRKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPQKPNAEPPTWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLYPDNHIIIWEHARSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKMVAGEPSRSAEKERRSDFFNQSWVEDAVIRYLNRKPPAGSDAPGS 1830
            KRILQ+PP+RPPGVPM NTMSPLRTMELT AARRKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIP+KPNAEPP WTLKIIGRILEDGVDPDQPGFVQ+TNPLYPKFSSFFK+VTISLDQ+LYP+NHIIIWEHARSP P+EGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNP DPSFFNCDAQLQKVFGED+VKFTMVSQKISQHL+ PPPIHLEHKIKLSGN P G ACYDVLVDVPFPIQRELSALLAN EKSKEIDACDEAICA IRKIH+H RRRAFFLGFSQSPVEFINAL++SQS+DLK+VAGE SRS E+ERRSDFFNQ WVEDAVIRYLNRKP AGSDAPGS
Sbjct:    8 KRILQKPPVRPPGVPMTNTMSPLRTMELTPAARRKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPKKPNAEPPMWTLKIIGRILEDGVDPDQPGFVQKTNPLYPKFSSFFKKVTISLDQRLYPENHIIIWEHARSPAPHEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPNDPSFFNCDAQLQKVFGEDKVKFTMVSQKISQHLASPPPIHLEHKIKLSGNGPVGTACYDVLVDVPFPIQRELSALLANAEKSKEIDACDEAICAAIRKIHEHRRRRAFFLGFSQSPVEFINALIESQSRDLKLVAGEASRSVERERRSDFFNQPWVEDAVIRYLNRKPAAGSDAPGS 432          
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy TrEMBL
Match: A0A0D2RMA6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G0414002 PE=4 SV=1)

HSP 1 Score: 790.415 bits (2040), Expect = 0.000e+0
Identity = 450/536 (83.96%), Postives = 482/536 (89.93%), Query Frame = -2
Query:  556 MSMNGNNPPKNLGASSSPFGNAGMVPPPMPGNPAFSQAQLSAGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGLSLNQAQNAGFGTLXXXXXXXXXXXXXXAKRILQXXXXXXXXXXXMNTMSPLRTMELTAAARRKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPQKPNAEPPTWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLYPDNHIIIWEHARSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKMVAGEPSRSAEKERRSDFFNQSWVEDAVIRYLNRKPPA-GSDAPGS 2160
            MS+N NNPPK++GASSSPFGNA           A +QAQLSAGFQ QYQLSQAQALA AQ++AQAQ              GLSLNQAQNAG G LG+SSPSMSTPGSASAKRILQRPPMRPPGVP+ NTMSPLR M+LT AAR+KKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAAL RKKVDIQEALKNPPCVQKTLRIYVFNTFANQ++TIP+KPNAEPPTWTLKIIGRILEDGVDPDQP FVQ+TNPLYPKFSSFFKRVTISLDQ+LYP+NHIIIWE ARSP P+EGFEVKRKGDKEFTVNIRLEMNY PEKFKLSSAL+EVLGIEVDTRPRIIAAIWHYVKARKLQNP DPS F CDAQL KVFGE++VKFTMVSQKISQHLS PPPIHLEHKIKLSGN+PAG+ACYDVLVDVP PIQR+LSALLAN EKSKEI+ CDEAICA IRKIH+H RRRAFFLGFSQSPVEFINAL++SQS+DLK+ +GE SRS+E+ERRSDFFNQ WVEDAVIRYLNRKP A GSDAPGS
Sbjct:    1 MSVNNNNPPKSIGASSSPFGNASQ---------AQTQAQLSAGFQNQYQLSQAQALAHAQAQAQAQLAHAQFQAHLQAQ-GLSLNQAQNAGIGNLGTSSPSMSTPGSASAKRILQRPPMRPPGVPVTNTMSPLRIMDLTTAARKKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALTRKKVDIQEALKNPPCVQKTLRIYVFNTFANQMQTIPKKPNAEPPTWTLKIIGRILEDGVDPDQPAFVQKTNPLYPKFSSFFKRVTISLDQRLYPENHIIIWEQARSPAPHEGFEVKRKGDKEFTVNIRLEMNYAPEKFKLSSALVEVLGIEVDTRPRIIAAIWHYVKARKLQNPNDPSCFICDAQLMKVFGEEKVKFTMVSQKISQHLSSPPPIHLEHKIKLSGNNPAGSACYDVLVDVPLPIQRDLSALLANAEKSKEIEQCDEAICAAIRKIHEHRRRRAFFLGFSQSPVEFINALIESQSRDLKLASGEASRSSERERRSDFFNQPWVEDAVIRYLNRKPGAGGSDAPGS 526          
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy TrEMBL
Match: A0A0D2SP54_GOSRA (Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_006G0414002 PE=4 SV=1)

HSP 1 Score: 787.719 bits (2033), Expect = 0.000e+0
Identity = 449/535 (83.93%), Postives = 481/535 (89.91%), Query Frame = -2
Query:  559 MSMNGNNPPKNLGASSSPFGNAGMVPPPMPGNPAFSQAQLSAGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGLSLNQAQNAGFGTLXXXXXXXXXXXXXXAKRILQXXXXXXXXXXXMNTMSPLRTMELTAAARRKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPQKPNAEPPTWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLYPDNHIIIWEHARSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKMVAGEPSRSAEKERRSDFFNQSWVEDAVIRYLNRKPPA-GSDAPG 2160
            MS+N NNPPK++GASSSPFGNA           A +QAQLSAGFQ QYQLSQAQALA AQ++AQAQ              GLSLNQAQNAG G LG+SSPSMSTPGSASAKRILQRPPMRPPGVP+ NTMSPLR M+LT AAR+KKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAAL RKKVDIQEALKNPPCVQKTLRIYVFNTFANQ++TIP+KPNAEPPTWTLKIIGRILEDGVDPDQP FVQ+TNPLYPKFSSFFKRVTISLDQ+LYP+NHIIIWE ARSP P+EGFEVKRKGDKEFTVNIRLEMNY PEKFKLSSAL+EVLGIEVDTRPRIIAAIWHYVKARKLQNP DPS F CDAQL KVFGE++VKFTMVSQKISQHLS PPPIHLEHKIKLSGN+PAG+ACYDVLVDVP PIQR+LSALLAN EKSKEI+ CDEAICA IRKIH+H RRRAFFLGFSQSPVEFINAL++SQS+DLK+ +GE SRS+E+ERRSDFFNQ WVEDAVIRYLNRKP A GSDAPG
Sbjct:    1 MSVNNNNPPKSIGASSSPFGNASQ---------AQTQAQLSAGFQNQYQLSQAQALAHAQAQAQAQLAHAQFQAHLQAQ-GLSLNQAQNAGIGNLGTSSPSMSTPGSASAKRILQRPPMRPPGVPVTNTMSPLRIMDLTTAARKKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALTRKKVDIQEALKNPPCVQKTLRIYVFNTFANQMQTIPKKPNAEPPTWTLKIIGRILEDGVDPDQPAFVQKTNPLYPKFSSFFKRVTISLDQRLYPENHIIIWEQARSPAPHEGFEVKRKGDKEFTVNIRLEMNYAPEKFKLSSALVEVLGIEVDTRPRIIAAIWHYVKARKLQNPNDPSCFICDAQLMKVFGEEKVKFTMVSQKISQHLSSPPPIHLEHKIKLSGNNPAGSACYDVLVDVPLPIQRDLSALLANAEKSKEIEQCDEAICAAIRKIHEHRRRRAFFLGFSQSPVEFINALIESQSRDLKLASGEASRSSERERRSDFFNQPWVEDAVIRYLNRKPGAGGSDAPG 525          
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy TrEMBL
Match: A0A067KTG3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04861 PE=4 SV=1)

HSP 1 Score: 781.941 bits (2018), Expect = 0.000e+0
Identity = 429/538 (79.74%), Postives = 471/538 (87.55%), Query Frame = -2
Query:  556 PPKNLGASSSPFGNAGMVPPPMPGNPAFSQAQ----LSAGFXXXXXXXXXXXXXXXX------XXXXXXXXXXXXXXXXXXXQGLSLNQAQNAGFGTLXXXXXXXXXXXXXXAKRILQXXXXXXXXXXXMNTMSPLRTMELTAAARRKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPQKPNAEPPTWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLYPDNHIIIWEHARSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKMVAGEPSRSAEKERRSDFFNQSWVEDAVIRYLNRKPPAGSDAPGS 2139
            PPK+LG SSSPFGN+GMV P MP N A SQ+Q    L  GFQ QYQL+QAQA AQA                HAQ QA LQAQG++L+QAQ A    LG+SSPS STPG+ + KR+ Q+PP+RPPGVPM + +SPL+TM+LT AARRKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAAL RKKVDIQEALKNPPCVQKTLRIYVFNTFANQ +TIP+KPNAEPP+WTLKI+GRILEDG+DPDQPG VQ++NPLYPKFSSFFKRVTI LDQ+LYPDNH+I+WEH+R+P P+EGFEVKRKGDKEFTV IRLEM Y PEK+KLS ALMEVLGIEVDTRPRIIAAIWHYVKARKLQNP DPSFFNCD  LQKVFGE ++KFTMVSQKISQHL+PP PI LEHKIKLSGNSPAG ACYDV+VDVPFPIQRELSALLAN EK+KEID CDEAICA IRKIH+H RRRAFFLGFSQSPVEFINAL++SQS+DLK+VAGE SRSAEKERR+DFFNQ WVEDAVIRYLNRKP AGSDAPGS
Sbjct:   10 PPKSLGQSSSPFGNSGMVNPSMPINQALSQSQSQGQLGTGFQGQYQLTQAQANAQAHFKAQQAHAQAQAQAVHAQFQAQLQAQGMTLSQAQTAALANLGTSSPSFSTPGNFNVKRLPQKPPVRPPGVPMGSLVSPLKTMDLTPAARRKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALVRKKVDIQEALKNPPCVQKTLRIYVFNTFANQTRTIPKKPNAEPPSWTLKIVGRILEDGIDPDQPGVVQKSNPLYPKFSSFFKRVTIMLDQRLYPDNHMIVWEHSRTPAPHEGFEVKRKGDKEFTVTIRLEMYYAPEKYKLSPALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPEDPSFFNCDPPLQKVFGEAKMKFTMVSQKISQHLAPPQPIVLEHKIKLSGNSPAGTACYDVVVDVPFPIQRELSALLANAEKNKEIDTCDEAICAAIRKIHEHRRRRAFFLGFSQSPVEFINALIESQSKDLKLVAGEASRSAEKERRADFFNQPWVEDAVIRYLNRKPTAGSDAPGS 547          
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy TrEMBL
Match: W9SAK8_9ROSA (SWI/SNF complex component SNF12-like protein OS=Morus notabilis GN=L484_010762 PE=4 SV=1)

HSP 1 Score: 776.548 bits (2004), Expect = 0.000e+0
Identity = 425/551 (77.13%), Postives = 456/551 (82.76%), Query Frame = -2
Query:  556 MSMNGNNPPKNLGASSSPFGNAGMVPPPMPGNPAF--------------SQAQLSAGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGLSLNQAQN-AGFGTLXXXXXXXXXXXXXXAKRILQXXXXXXXXXXXMNTMSPLRTMELT-AAARRKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPQKPNAEPPTWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLYPDNHIIIWEHARSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKMVAGEPSRSAEKERRSDFFNQSWVEDAVIRYLNRKPPAGSDAPGS 2160
            MS N NNPPK+LGASSSPFGNA MV P M GNP F              +Q QLS       Q                   AHAQ QAHLQAQGL+LNQ Q  A  G+    SP +S  GSA  KRI Q+PP+RPPG+     MSPLRTMELT AAARRKKQKLPEKQLQD+VAAILPESALYTQLLEFEARVDAAL RKKVDIQEALK P CVQKTLRIYVFNTFANQI+TIPQKPNAEPPTWTLKI+GR+LEDG+DPDQPG VQ+TNPLYPKFSSFFKRVTISLDQ+LYPDNHIIIWE+AR+P P+EGFEV+RKGDKEFTVNIRLEMNYVPEKFKLS  L++VLGIEVDTRPRIIAAIW YVKARKLQNP+DPSFFNCD  LQKVFGED++KFTMVSQKISQHL PP PIHLEHKIKLSGNSP G ACYDVLVDVPFPIQRELS LLAN EK KEID+CDEAICA IRKIH+H RRRAFFLGFSQSPVEFIN L++SQS+DLK+V GE SRSAEKERR+DFFNQ WVEDAVIRYLNRKP  GSDAPGS
Sbjct:    1 MSANSNNPPKSLGASSSPFGNANMVAPNMGGNPNFPQSQAQAQIAAGFQNQFQLSQ-----AQAIAQAQSKAQAHAQAQVQAAHAQFQAHLQAQGLTLNQNQGIANMGS----SPGLSNTGSAGMKRIPQKPPVRPPGLTSPTMMSPLRTMELTPAAARRKKQKLPEKQLQDKVAAILPESALYTQLLEFEARVDAALNRKKVDIQEALKTPHCVQKTLRIYVFNTFANQIRTIPQKPNAEPPTWTLKIVGRLLEDGIDPDQPGVVQKTNPLYPKFSSFFKRVTISLDQRLYPDNHIIIWENARTPAPHEGFEVRRKGDKEFTVNIRLEMNYVPEKFKLSQPLVDVLGIEVDTRPRIIAAIWQYVKARKLQNPHDPSFFNCDPPLQKVFGEDKMKFTMVSQKISQHLFPPQPIHLEHKIKLSGNSPVGTACYDVLVDVPFPIQRELSVLLANAEKCKEIDSCDEAICAAIRKIHEHRRRRAFFLGFSQSPVEFINTLIESQSKDLKLVTGEGSRSAEKERRADFFNQPWVEDAVIRYLNRKPVTGSDAPGS 542          
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy TrEMBL
Match: K7KP05_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 772.311 bits (1993), Expect = 0.000e+0
Identity = 430/545 (78.90%), Postives = 474/545 (86.97%), Query Frame = -2
Query:  556 MSMNGNNPPKNLGASSSPFGNAGMVPPPMPGNPAFSQ----AQLSAGF------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGLSLNQAQNAGFGTLXXXXXXXXXXXXXXAKRILQXXXXXXXXXXXMNTMSPLRTMELTAAARRKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPQKPNAEPPTWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLYPDNHIIIWEHARSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKMVAGEPSRSAEKERRSDFFNQSWVEDAVIRYLNRKPPAGSDAPGS 2160
            MS+N NNP K +GASSS FGNAG+    +P NP FSQ    AQ+  GF         + + QAQ+ AQAQ++AQA A AHAQLQAHLQAQGLSLNQ Q  G G    SSPS+STPG+AS KRI  +PPMRP G    N+ SPLR MELT AARRKKQKLPEKQLQD+VAAILPESALYTQLLEFE+RVDAALARKK DIQEALKNPPC+QKTLRIYVFNTFANQI+TIP+KPN EPPTWTLKI+GRILEDGVDPDQPG VQ+++PLYPKFS+FFKRVTISLDQ+LYPDNHII+WE+ARSP P+EGFEVKRKGDKEFTVNIRLEMNYVPEKFKLS AL EVLGIEVDTRPRI+AAIWHYVKARKLQNP DPS+F+CD  LQKVFGE+ +KFTMVSQKIS HL PP PI LEHKIKLSGNSPAG ACYDV+VDVPFPIQRELSALLAN EK+K+I+ CDEAIC  IRKIH+H RRRAFFLGFSQSPVEFINAL++SQS+DLK+V+GEPSR+AEKERRSDFFNQ WVEDAVIRYLNRKP AGSDAPGS
Sbjct:    1 MSVNNNNPSKGIGASSSTFGNAGIPSNSIPSNPGFSQSQGQAQIPVGFQGQFPLSQAHAIVQAQSKAQAQAQAQAAAAAHAQLQAHLQAQGLSLNQNQAGGLGV---SSPSISTPGNASGKRIPMKPPMRPVGFSPPNSFSPLRPMELTPAARRKKQKLPEKQLQDKVAAILPESALYTQLLEFESRVDAALARKKADIQEALKNPPCIQKTLRIYVFNTFANQIRTIPKKPNVEPPTWTLKIVGRILEDGVDPDQPGVVQKSSPLYPKFSAFFKRVTISLDQRLYPDNHIILWENARSPAPHEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSPALTEVLGIEVDTRPRIVAAIWHYVKARKLQNPNDPSYFHCDPPLQKVFGEENMKFTMVSQKISSHLFPPQPILLEHKIKLSGNSPAGTACYDVMVDVPFPIQRELSALLANVEKNKDIETCDEAICGIIRKIHEHRRRRAFFLGFSQSPVEFINALIESQSRDLKLVSGEPSRNAEKERRSDFFNQPWVEDAVIRYLNRKPAAGSDAPGS 542          
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy TrEMBL
Match: A0A0B2Q1F0_GLYSO (SWI/SNF complex component SNF12 like OS=Glycine soja GN=glysoja_044905 PE=4 SV=1)

HSP 1 Score: 772.311 bits (1993), Expect = 0.000e+0
Identity = 430/545 (78.90%), Postives = 474/545 (86.97%), Query Frame = -2
Query:  556 MSMNGNNPPKNLGASSSPFGNAGMVPPPMPGNPAFSQ----AQLSAGF------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGLSLNQAQNAGFGTLXXXXXXXXXXXXXXAKRILQXXXXXXXXXXXMNTMSPLRTMELTAAARRKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPQKPNAEPPTWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLYPDNHIIIWEHARSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKMVAGEPSRSAEKERRSDFFNQSWVEDAVIRYLNRKPPAGSDAPGS 2160
            MS+N NNP K +GASSS FGNAG+    +P NP FSQ    AQ+  GF         + + QAQ+ AQAQ++AQA A AHAQLQAHLQAQGLSLNQ Q  G G    SSPS+STPG+AS KRI  +PPMRP G    N+ SPLR MELT AARRKKQKLPEKQLQD+VAAILPESALYTQLLEFE+RVDAALARKK DIQEALKNPPC+QKTLRIYVFNTFANQI+TIP+KPN EPPTWTLKI+GRILEDGVDPDQPG VQ+++PLYPKFS+FFKRVTISLDQ+LYPDNHII+WE+ARSP P+EGFEVKRKGDKEFTVNIRLEMNYVPEKFKLS AL EVLGIEVDTRPRI+AAIWHYVKARKLQNP DPS+F+CD  LQKVFGE+ +KFTMVSQKIS HL PP PI LEHKIKLSGNSPAG ACYDV+VDVPFPIQRELSALLAN EK+K+I+ CDEAIC  IRKIH+H RRRAFFLGFSQSPVEFINAL++SQS+DLK+V+GEPSR+AEKERRSDFFNQ WVEDAVIRYLNRKP AGSDAPGS
Sbjct:    1 MSVNNNNPSKGIGASSSTFGNAGIPSNSIPSNPGFSQSQGQAQIPVGFQGQFPLSQAHAIVQAQSKAQAQAQAQAAAAAHAQLQAHLQAQGLSLNQNQAGGLGV---SSPSISTPGNASGKRIPMKPPMRPVGFSPPNSFSPLRPMELTPAARRKKQKLPEKQLQDKVAAILPESALYTQLLEFESRVDAALARKKADIQEALKNPPCIQKTLRIYVFNTFANQIRTIPKKPNVEPPTWTLKIVGRILEDGVDPDQPGVVQKSSPLYPKFSAFFKRVTISLDQRLYPDNHIILWENARSPAPHEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSPALTEVLGIEVDTRPRIVAAIWHYVKARKLQNPNDPSYFHCDPPLQKVFGEENMKFTMVSQKISSHLFPPQPILLEHKIKLSGNSPAGTACYDVMVDVPFPIQRELSALLANVEKNKDIETCDEAICGIIRKIHEHRRRRAFFLGFSQSPVEFINALIESQSRDLKLVSGEPSRNAEKERRSDFFNQPWVEDAVIRYLNRKPAAGSDAPGS 542          
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy Swiss-Prot
Match: SNF12_ARATH (SWI/SNF complex component SNF12 homolog OS=Arabidopsis thaliana GN=At5g14170 PE=1 SV=1)

HSP 1 Score: 751.895 bits (1940), Expect = 0.000e+0
Identity = 407/537 (75.79%), Postives = 467/537 (86.96%), Query Frame = -2
Query:  556 MSMNGNNPPKNLGASSSPFGNAGMVPPPMPGNPAFSQAQLSAGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGLSLNQAQNA-GFGTLXXXXXXXXXXXXXXAKRILQXXXXXXXXX-XXMNTMSPLRTMELTAAARRKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPQKPNAEPPTWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLYPDNHIIIWEHARSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKMVAGEPSRSAEKERRSDFFNQSWVEDAVIRYLNRKPPAGSDAPGS 2160
            MS N NNP K  G++  PFGN GM    +PGN  F+Q+ ++A     +Q     + AQA + AQAQ++  AQLQA LQAQG+++NQAQ + G G LG SSPS++TPGS + KR  Q+PPMRPPG     NT+SP+RTMELT AAR+KKQKLPEK LQ+RVAAILPESALYTQLLEFE+RVDAAL RKKVDIQEALKNPPC+QKTLRIYVFN+FANQ  TIP  PNA+PPTWTLKIIGRILEDGVDPDQPGFVQ+ NPL+PKFSSFFKRVT+SLDQ+LYP+N +IIWE+ARSP P EGFE+KRKG++EF  +IRLEMNYVPEKFKLS+ALM+VLGIEV+TRPRIIAAIWHYVKARKLQNP DPSFFNCDA LQKVFGE+++KFTMVSQKIS HLSPPPPIHLEHKIKLSGN+PA +ACYDVLVDVPFPIQR+L+ LLAN EK+KEI+ACDEAICA IRKIH+H RRRAFFLGFSQSPVEFINAL++SQS+DLK+VAGE SR+AE+ERRSDFFNQ WVEDAVIRYLNR+P AG+D PGS
Sbjct:    1 MSGNNNNPQKPQGSAPLPFGNPGMASASVPGNQGFAQSHMAAN----FQAQFQFSQAQALAHAQAQSKVQAQLQAQLQAQGMTMNQAQGSPGIGGLGPSSPSLTTPGSLNMKRFQQKPPMRPPGAPASNNTISPMRTMELTPAARKKKQKLPEKSLQERVAAILPESALYTQLLEFESRVDAALTRKKVDIQEALKNPPCIQKTLRIYVFNSFANQNNTIPGNPNADPPTWTLKIIGRILEDGVDPDQPGFVQKANPLHPKFSSFFKRVTVSLDQRLYPENPLIIWENARSPAPQEGFEIKRKGNQEFAASIRLEMNYVPEKFKLSTALMDVLGIEVETRPRIIAAIWHYVKARKLQNPNDPSFFNCDAALQKVFGEEKLKFTMVSQKISHHLSPPPPIHLEHKIKLSGNNPAVSACYDVLVDVPFPIQRDLNNLLANAEKNKEIEACDEAICAAIRKIHEHRRRRAFFLGFSQSPVEFINALIESQSKDLKVVAGEASRNAERERRSDFFNQPWVEDAVIRYLNRRPAAGNDGPGS 533          
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy Swiss-Prot
Match: SMRD1_MOUSE (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 OS=Mus musculus GN=Smarcd1 PE=1 SV=3)

HSP 1 Score: 273.478 bits (698), Expect = 1.639e-80
Identity = 149/385 (38.70%), Postives = 219/385 (56.88%), Query Frame = -2
Query:  586 KKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPQKPNAEPPTWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLY-PDNHIIIWEHARSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKM---VAGEPSRSAEKERRSDFFNQSWVEDAVIRYLNRK 1728
            KK+K+ +K L  R+  ++PES  Y  LL FE ++D  + RK++DIQEALK P   ++ LRI++ NTF N  K+  +       +W L++ GR+LED          Q+      KFSSFFK + I LD+ LY PDNH++ W    +    +GF+VKR GD      + L ++Y P +FKL   L  +LGI   TRP II A+W Y+K  KLQ+P++  F  CD  LQ++F   R+KF+ + Q++   L PP PI + H I +  N     ACYD+ V+V   ++ ++++ L +    +EI   D  I  TI  I+    +R F L F++ P  FIN  +QSQ +DLK    V G P    E+ERR++F+ Q W ++AV RY   K
Sbjct:  124 KKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRIFISNTF-NPAKSDAEDGEGTVASWELRVEGRLLEDAALSKYDATKQKR-----KFSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVLCDKYLQQIFESQRMKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIATLDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNP----EEERRAEFYFQPWAQEAVCRYFYSK 498          
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy Swiss-Prot
Match: SMRD1_HUMAN (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 OS=Homo sapiens GN=SMARCD1 PE=1 SV=2)

HSP 1 Score: 273.092 bits (697), Expect = 1.674e-80
Identity = 149/385 (38.70%), Postives = 219/385 (56.88%), Query Frame = -2
Query:  586 KKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPQKPNAEPPTWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLY-PDNHIIIWEHARSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKM---VAGEPSRSAEKERRSDFFNQSWVEDAVIRYLNRK 1728
            KK+K+ +K L  R+  ++PES  Y  LL FE ++D  + RK++DIQEALK P   ++ LRI++ NTF N  K+  +       +W L++ GR+LED          Q+      KFSSFFK + I LD+ LY PDNH++ W    +    +GF+VKR GD      + L ++Y P +FKL   L  +LGI   TRP II A+W Y+K  KLQ+P++  F  CD  LQ++F   R+KF+ + Q++   L PP PI + H I +  N     ACYD+ V+V   ++ ++++ L +    +EI   D  I  TI  I+    +R F L F++ P  FIN  +QSQ +DLK    V G P    E+ERR++F+ Q W ++AV RY   K
Sbjct:  124 KKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRIFISNTF-NPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKR-----KFSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIATLDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNP----EEERRAEFYFQPWAQEAVCRYFYSK 498          
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy Swiss-Prot
Match: SMRD1_BOVIN (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 OS=Bos taurus GN=SMARCD1 PE=2 SV=1)

HSP 1 Score: 269.626 bits (688), Expect = 4.400e-79
Identity = 146/382 (38.22%), Postives = 219/382 (57.33%), Query Frame = -2
Query:  586 KKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPQKPNAEPPTWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLY-PDNHIIIWEHARSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKMVAGEPSRSAEKERRSDFFNQSWVEDAVIRYLNRK 1728
            KK+K+ +K L  R+  ++PES  Y  LL FE ++D  + RK++DIQEALK P   ++ LRI++ NTF N  K+  +       +W L++ GR+LED          Q+      KFSSFFK + I LD+ LY PDNH++ W    +    +GF+VKR GD      + L ++Y P +FKL   L  +LGI   TRP II A+W Y+K  KLQ+P++  F  CD  LQ++F   R+KF+ + Q++   L PP PI + H I +  N     ACYD+  +V   ++ ++++ L +    +EI   D  I  TI  I+    +R F L F++ P  FIN  +QSQ +DLK V  +   ++E+ERR++F+ Q W ++AV RY   K
Sbjct:  124 KKKKMADKILPQRIRELVPESQDYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRIFISNTF-NPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKR-----KFSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDEEVDDTLKTQMNSFLLSTASQQEIATLDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLK-VMTDVVGNSEEERRAEFYFQPWAQEAVCRYFYSK 498          
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy Swiss-Prot
Match: BAP60_DROME (Brahma-associated protein of 60 kDa OS=Drosophila melanogaster GN=Bap60 PE=1 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 1.293e-78
Identity = 145/379 (38.26%), Postives = 220/379 (58.05%), Query Frame = -2
Query:  595 LPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPQKPNAEPPTWTLKIIGRILEDGV-DPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLY-PDNHIIIWEHARSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKM---VAGEPSRSAEKERRSDFFNQSWVEDAVIRYL 1716
            L EK L  +V  ++PES  Y  LL FE ++DA + RK++DIQEALK P   ++ LRI++ NTF    +           +W L++ GR+LEDG  DP+          +  KFSSFFK + I LD++LY PDNH++ W    +    +GF+VKR GD+     I L ++Y P +FKL   L  +LG+   TRP II+A+W Y+K  KLQ+ ++  + NCD  L+++F   R+KF  + Q+++  L PP PI + H I+ SG      ACYD+ V+V   ++ ++++ L +    +EI   D  I  T+  I+     R FFL F++ P  FI+  + S+++DLK+   VAG P    E+ERR++F+ Q W  +AV RY 
Sbjct:  130 LAEKILPQKVRDLVPESQAYMDLLTFERKLDATIMRKRLDIQEALKRPMKQKRKLRIFISNTFYPSKEPTNDGEEGAVASWELRVEGRLLEDGKGDPN--------TKIKRKFSSFFKSLVIELDKELYGPDNHLVEWHRTHTTQETDGFQVKRPGDRNVRCTILLLLDYQPLQFKLDPRLARLLGVHTQTRPVIISALWQYIKTHKLQDAHEREYINCDKYLEQIFSCQRMKFAEIPQRLNPLLHPPDPIVINHFIE-SGAENKQTACYDIDVEVDDTLKNQMNSFLMSTASQQEIQGLDTKIHETVDTINQMKTNREFFLSFAKDPQMFIHRWIISETRDLKLMTDVAGNP----EEERRAEFYYQPWTHEAVSRYF 495          
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy Swiss-Prot
Match: SMRD3_MOUSE (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 OS=Mus musculus GN=Smarcd3 PE=1 SV=2)

HSP 1 Score: 264.233 bits (674), Expect = 1.585e-77
Identity = 154/398 (38.69%), Postives = 232/398 (58.29%), Query Frame = -2
Query:  595 TAAARR---KKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPQKPNAEPP-----TWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLY-PDNHIIIWEHARSPTPNE--GFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKM---VAGEPSRSAEKERRSDFFNQSWVEDAVIRYL 1746
            TA AR    K++K+ +K L  R+  ++PES  Y  LL FE ++D  + RK+VDIQEALK P   ++ LR+Y+ NTF       P KP+AE       +W L++ G++L+D      P   +R      KFSSFFK + I LD+ LY PDNH++ W   R+PT  E  GF+VKR GD      + L ++Y P +FKL   L  +LG+   +R  I+ A+W YVK  +LQ+ +D  + N D   Q++F   R+KF+ + Q+++  L PP PI + H I +  +     ACYD+ V+V  P++ ++S+ L +    +EI A D  I  TI  I+    +R F L FS+ P  ++  L++SQS+DLK+   VAG P    E+ERR++F++Q W ++AV RY 
Sbjct:   90 TAPARSRSAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLRLYISNTFN------PAKPDAEDSDGSIASWELRVEGKLLDD------PSKQKR------KFSSFFKSLVIELDKDLYGPDNHLVEWH--RTPTTQETDGFQVKRPGDLSVRCTLLLMLDYQPPQFKLDPRLARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQIFDCPRLKFSEIPQRLTALLLPPDPIVINHVISVDPSDQKKTACYDIDVEVEEPLKGQMSSFLLSTANQQEISALDSKIHETIESINQLKIQRDFMLSFSRDPKGYVQDLLRSQSRDLKVMTDVAGNP----EEERRAEFYHQPWSQEAVSRYF 463          
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy Swiss-Prot
Match: SMRD3_HUMAN (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 OS=Homo sapiens GN=SMARCD3 PE=1 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 1.585e-77
Identity = 154/398 (38.69%), Postives = 232/398 (58.29%), Query Frame = -2
Query:  595 TAAARR---KKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPQKPNAEPP-----TWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLY-PDNHIIIWEHARSPTPNE--GFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKM---VAGEPSRSAEKERRSDFFNQSWVEDAVIRYL 1746
            TA AR    K++K+ +K L  R+  ++PES  Y  LL FE ++D  + RK+VDIQEALK P   ++ LR+Y+ NTF       P KP+AE       +W L++ G++L+D      P   +R      KFSSFFK + I LD+ LY PDNH++ W   R+PT  E  GF+VKR GD      + L ++Y P +FKL   L  +LG+   +R  I+ A+W YVK  +LQ+ +D  + N D   Q++F   R+KF+ + Q+++  L PP PI + H I +  +     ACYD+ V+V  P++ ++S+ L +    +EI A D  I  TI  I+    +R F L FS+ P  ++  L++SQS+DLK+   VAG P    E+ERR++F++Q W ++AV RY 
Sbjct:   90 TAPARSRSAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLRLYISNTFN------PAKPDAEDSDGSIASWELRVEGKLLDD------PSKQKR------KFSSFFKSLVIELDKDLYGPDNHLVEWH--RTPTTQETDGFQVKRPGDLSVRCTLLLMLDYQPPQFKLDPRLARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQIFDCPRLKFSEIPQRLTALLLPPDPIVINHVISVDPSDQKKTACYDIDVEVEEPLKGQMSSFLLSTANQQEISALDSKIHETIESINQLKIQRDFMLSFSRDPKGYVQDLLRSQSRDLKVMTDVAGNP----EEERRAEFYHQPWSQEAVSRYF 463          
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy Swiss-Prot
Match: SMRD2_MOUSE (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 OS=Mus musculus GN=Smarcd2 PE=2 SV=2)

HSP 1 Score: 243.432 bits (620), Expect = 1.963e-69
Identity = 139/398 (34.92%), Postives = 225/398 (56.53%), Query Frame = -2
Query:  595 AARR--KKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTF---------ANQIKTIPQKPNAEP-PTWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLY-PDNHIIIWEHARSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKMVA---GEPSRSAEKERRSDFFNQSWVEDAVIRYL 1740
            A RR  K++K+ +K L  R+  ++PES  Y  LL FE ++D  +ARK+++IQEA+K P   ++ LRIY+ NTF         A    T    P A+   +W L++ G++L+D      P   +R      KFSSFFK + I LD++LY PDNH++ W    +    +GF+VKR GD      + L +++ P ++KL   L  +LG+   TR  I+ A+W Y+K  +LQ+ ++  + NC+   +++F   R++F+ +  K++  L  P PI + H I +  N     ACYD+ V+V  P++ ++S  LA+    +EI + D  I  TI  I+    +R F L FS  P +FI   ++SQ +DLK++    G P    E+ERR+ F++Q W ++AV R++
Sbjct:  130 AQRRGLKRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPLTQKRKLRIYISNTFSPSKADGDNAGTAGTPGGTPAADKVASWELRVEGKLLDD------PSKQKR------KFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFRQIFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQMSNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTEPQDFIQEWLRSQRRDLKIITDVIGNP----EEERRAAFYHQPWAQEAVGRHI 511          
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy Swiss-Prot
Match: SMRD2_RAT (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 OS=Rattus norvegicus GN=Smarcd2 PE=2 SV=3)

HSP 1 Score: 243.047 bits (619), Expect = 3.627e-69
Identity = 137/398 (34.42%), Postives = 223/398 (56.03%), Query Frame = -2
Query:  595 AARR--KKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFA-----NQIKTIPQKPNAEPP-----TWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLY-PDNHIIIWEHARSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKMVA---GEPSRSAEKERRSDFFNQSWVEDAVIRYL 1740
            A RR  K++K+ +K L  R+  ++PES  Y  LL FE ++D  +ARK+++IQEA+K P   ++ LRIY+ NTF+              P   P      +W L++ G++L+D      P   +R      KFSSFFK + I LD++LY PDNH++ W    +    +GF+VKR GD      + L +++ P ++KL   L  +LG+   TR  I+ A+W Y+K  +LQ+ ++  + NC+   +++F   R++F+ +  K++  L  P PI + H I +  N     ACYD+ V+V  P++ ++S  LA+    +EI + D  I  TI  I+    +R F L FS  P +FI   ++SQ +DLK++    G P    E+ERR+ F++Q W ++AV R++
Sbjct:  130 AQRRGLKRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPLTQKRKLRIYISNTFSPSKADGDNSGTAGTPGGTPAADKVASWELRVEGKLLDD------PSKQKR------KFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFRQIFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQMSNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTEPQDFIQEWLRSQRRDLKIITDVIGNP----EEERRAAFYHQPWAQEAVGRHI 511          
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy Swiss-Prot
Match: SMRD2_HUMAN (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 OS=Homo sapiens GN=SMARCD2 PE=1 SV=3)

HSP 1 Score: 242.276 bits (617), Expect = 5.315e-69
Identity = 137/398 (34.42%), Postives = 223/398 (56.03%), Query Frame = -2
Query:  595 AARR--KKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFA-----NQIKTIPQKPNAEPP-----TWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLY-PDNHIIIWEHARSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKMVA---GEPSRSAEKERRSDFFNQSWVEDAVIRYL 1740
            A RR  K++K+ +K L  R+  ++PES  Y  LL FE ++D  +ARK+++IQEA+K P   ++ LRIY+ NTF+              P   P      +W L++ G++L+D      P   +R      KFSSFFK + I LD++LY PDNH++ W    +    +GF+VKR GD      + L +++ P ++KL   L  +LG+   TR  I+ A+W Y+K  +LQ+ ++  + NC+   +++F   R++F+ +  K++  L  P PI + H I +  N     ACYD+ V+V  P++ ++S  LA+    +EI + D  I  TI  I+    +R F L FS  P +FI   ++SQ +DLK++    G P    E+ERR+ F++Q W ++AV R++
Sbjct:  130 AQRRGLKRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPLTQKRKLRIYISNTFSPSKAEGDSAGTAGTPGGTPAGDKVASWELRVEGKLLDD------PSKQKR------KFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFRQIFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQMSNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTDPQDFIQEWLRSQRRDLKIITDVIGNP----EEERRAAFYHQPWAQEAVGRHI 511          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0A0LB48_CUCSA0.000e+078.02Uncharacterized protein OS=Cucumis sativus GN=Csa_... [more]
A0A0B0MFQ5_GOSAR0.000e+084.14Uncharacterized protein OS=Gossypium arboreum GN=F... [more]
B9GJS7_POPTR0.000e+077.94SWIB complex BAF60b domain-containing family prote... [more]
A0A061EEG0_THECC0.000e+092.47Chromatin remodeling complex subunit isoform 2 OS=... [more]
A0A0D2RMA6_GOSRA0.000e+083.96Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A0D2SP54_GOSRA0.000e+083.93Uncharacterized protein (Fragment) OS=Gossypium ra... [more]
A0A067KTG3_JATCU0.000e+079.74Uncharacterized protein OS=Jatropha curcas GN=JCGZ... [more]
W9SAK8_9ROSA0.000e+077.13SWI/SNF complex component SNF12-like protein OS=Mo... [more]
K7KP05_SOYBN0.000e+078.90Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
A0A0B2Q1F0_GLYSO0.000e+078.90SWI/SNF complex component SNF12 like OS=Glycine so... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
SNF12_ARATH0.000e+075.79SWI/SNF complex component SNF12 homolog OS=Arabido... [more]
SMRD1_MOUSE1.639e-8038.70SWI/SNF-related matrix-associated actin-dependent ... [more]
SMRD1_HUMAN1.674e-8038.70SWI/SNF-related matrix-associated actin-dependent ... [more]
SMRD1_BOVIN4.400e-7938.22SWI/SNF-related matrix-associated actin-dependent ... [more]
BAP60_DROME1.293e-7838.26Brahma-associated protein of 60 kDa OS=Drosophila ... [more]
SMRD3_MOUSE1.585e-7738.69SWI/SNF-related matrix-associated actin-dependent ... [more]
SMRD3_HUMAN1.585e-7738.69SWI/SNF-related matrix-associated actin-dependent ... [more]
SMRD2_MOUSE1.963e-6934.92SWI/SNF-related matrix-associated actin-dependent ... [more]
SMRD2_RAT3.627e-6934.42SWI/SNF-related matrix-associated actin-dependent ... [more]
SMRD2_HUMAN5.315e-6934.42SWI/SNF-related matrix-associated actin-dependent ... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019835SWIB domainSMARTSM00151swib_2coord: 335..414
e-value: 1.4E-17
score: 74.4
IPR003121SWIB/MDM2 domainGENE3D1.10.245.10coord: 329..420
e-value: 5.0E-29
score: 99.8
IPR003121SWIB/MDM2 domainPFAMPF02201SWIBcoord: 338..409
e-value: 5.4E-23
score: 80.5
IPR003121SWIB/MDM2 domainSUPERFAMILY47592SWIB/MDM2 domaincoord: 329..419
NoneNo IPR availablePANTHERPTHR13844:SF13SUBFAMILY NOT NAMEDcoord: 9..91
coord: 151..544
NoneNo IPR availablePANTHERPTHR13844BRG-1 ASSOCIATED FACTOR 60 BAF60coord: 9..91
NoneNo IPR availablePANTHERPTHR13844BRG-1 ASSOCIATED FACTOR 60 BAF60coord: 151..544

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0021561 ID=g.arboreum_cottongen_reftransV1_0021561; Name=g.arboreum_cottongen_reftransV1_0021561; organism=Gossypium arboreum; type=contig; length=2287bp
GAAAGGGAGACCAAGGCATGCTGGTCCAAACTCTTCATGAGGATTTTTCT
TGATTTGCTAGTACCCAACATTTTTTTCGGACACTGATGTAAGGATCTCT
GACTTAAGGACCCTTAAAATACATGAAAGAGCTTTTAGAAATTTGGACAC
ACCCACATTTGAGACACATGACAATATCTGACACTCGTATCCTAAATCAA
GGTATGATTATCCTGGAGTGTACCATATATAAATTACAAATTGAACTAAA
TAAAACTATCATATGCTAATTTCTATTTTTTTTTTCGTTTAAAAAAGTTT
GATGATAACCATGCCTAAACAAGCTACTTCCTGTTCTACATCCCTCTCTA
AATCCTCATCCAACAACATTGTAATTCTACTTCCACTAAAGGACTGGTCT
ACAGTTCAGTTGATACATGATTCAAATCAATGAAAAACCTAGCAAGCCAT
CGATACCTTCGGAACCATGATTCATGTTCTTCCTGGAGCCTTACTTCCAG
TAGCTGGCTTCTCCAGGGCATCACTTTCCACTAGGTGGCTTTGCATGATT
CATATGCTTCCTGGAGCATCACTTCCAGCAGGTGGCTTGCGATTCAGATA
ACGGATCACAGCATCTTCAACCCAAGATTGGTTAAAGAAATCTGATCGCC
GCTCTTTTTCAGCACTTCGACTAGGTTCTCCAGCTACCATTTTCAGATCC
TGGCTCTGAGACTGAACTAAAGCATTTATAAATTCTACTGGAGATTGACT
GAATCCTAGGAAAAATGCACGTCTTCTACAGTGGTCATGAATTTTCCTTA
TGGTAGCACATATTGCTTCATCACAAGCATCAATCTCTTTGCTCTTCTCT
CCATTTGCCAACAGAGCAGACAATTCCCTCTGTATAGGAAAGGGCACGTC
AACTAACACATCATAGCATGCATTTCCAGCAGGACTATTCCCGGAAAGCT
TGATTTTATGCTCCAAATGTATGGGTGGTGGTGGAGACAAATGCTGTGAT
ATCTTCTGTGAAACCATGGTAAATTTCACTCTGTCTTCCCCAAAAACTTT
CTGAAGCTGTGCATCACAATTAAAAAAGGACGGATCATATGGGTTCTGAA
GTTTTCTAGCCTTCACATAATGCCAAATTGCAGCAATAATTCTGGGGCGC
GTATCAACTTCAATACCAAGGACTTCCATTAAAGCAGAAGAAAGCTTAAA
TTTCTCAGGTACATAATTCATTTCCAGCCGTATGTTCACAGTGAACTCCT
TATCCCCTTTTCTCTTCACCTCAAAACCTTCATTAGGTGTCGGTGATCGA
GCATGCTCCCATATAATGATATGATTATCTGGATATAGTTTTTGGTCCAA
TGAAATTGTCACTCTCTTGAAGAAAGATGAAAACTTCGGGTATAAAGGGT
TTGTTCTTTGAACAAATCCAGGTTGATCTGGATCTACTCCATCTTCCAGG
ATTCTCCCAATAATCTTAAGGGTCCATGTAGGAGGCTCTGCATTAGGCTT
CTGCGGAATTGTCTTAATCTGATTAGCAAATGTGTTGAAAACATATATTC
GAAGAGTTTTCTGAACACAAGGTGGGTTCTTAAGTGCTTCCTGGATGTCA
ACTTTTTTCCTAGCTAATGCAGCATCAACACGTGCCTCAAACTCAAGAAG
CTGGGTATACAAAGCAGATTCAGGAAGAATTGCTGCCACTCTATCCTGTA
GTTGTTTCTCAGGAAGCTTCTGCTTCTTTCTACGTGCAGCGGCTGTAAGT
TCCATTGTTCTCAAAGGTGACATTGTGTTCATCATAGGAACACCAGGAGG
GCGCATGGGGGGCCTTTGAAGGATTCTCTTTGCACTTGCACTGCCAGGAG
TAGACATGGAGGGTGAAGACGAACCTAATGTCCCAAAGCCAGCATTCTGA
GCCTGGTTAAGGGACAAACCTTGAGCTTGTAAGTGTGCTTGGAGTTGGGC
ATGAGCTTGAGCTTGAGCTTGAGCTTTCGACTGAGCCTGAGCAAGGGCTT
GAGCTTGGGATAGCTGATACTGAGCTTGAAACCCAGCGCTGAGTTGAGCT
TGTGAAAATGCAGGGTTTCCAGGCATAGGAGGAGGCACCATCCCCGCATT
ACCAAAGGGCGACGAAGATGCCCCAAGGTTCTTCGGGGGATTATTGCCAT
TCATAGACATCACCGGAAAAATATCAAATATCCACCAAAATCTAAAACAT
TCACAACAAAGCAAATTCCAAGCTATCTCAGCAAATACCCACTAACCAAA
AACACCCAAAGAAGCAATGATTCCCTTTAAAATCAAG
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR019835SWIB_domain
IPR003121SWIB_MDM2_domain
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding