g.arboreum_cottongen_reftransV1_0021561, g.arboreum_cottongen_reftransV1_0021561 (contig) Gossypium arboreum
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy TrEMBL
Match: A0A0A0LB48_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G585900 PE=4 SV=1) HSP 1 Score: 795.808 bits (2054), Expect = 0.000e+0 Identity = 426/546 (78.02%), Postives = 466/546 (85.35%), Query Frame = -2 Query: 556 MSMNGNNPPKNLG-ASSSPFGNAGMVPPPMPGNP-AFSQ----AQLSAGFX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGLSLNQAQNAGFGTLXXXXXXXXXXXXXXAKRILQXXXXXXXXXXXMNTMSPLRTMELTAAARRKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPQKPNAEPPTWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLYPDNHIIIWEHARSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKMVAGEPSRSAEKERRSDFFNQSWVEDAVIRYLNRKPPAGSDAPGS 2160 MSMN NNPPK LG ASSSPFGN+GMVPP M N +FSQ AQL AGFQ Q+ AHAQ QA LQAQGLSL Q+QN G G +GS SP STPG A KRI Q+PP+RPP + T SPL+TMELT AAR+KKQKLPEKQLQD+VAAILPESALYTQLLEFE+RVDAALARKKVDI EALKNPPC+QKTLRIYVFNTFANQ+ TIP+KPNA+PPTWTLKIIGRILEDG+DPD PG VQR+NPLYPKFSSFFKRVTISLDQ+LYPD+HII+WE+ARSP P+EGFEVKRKGDKEF+VNIRLEMNY+PEKFKLS ALMEVLGIEVDTRPRIIAAIWHYVKARKLQNP DPSFF+CD LQKVFGED++KFTMVSQ+ISQHL PP PIHLEHK+KLSGNSPAG ACYDVLVDVPFPI RELSALLAN EK+KEIDACDEAIC IRKIH+H RRRAFFLGFSQSPVEFI+AL++SQS+DLK++AGE SR+AEKERRSDFFNQ WVEDAVIRY+NRKP GSDAPGS Sbjct: 1 MSMNNNNPPKTLGGASSSPFGNSGMVPPSMAANSTSFSQPQPQAQLGAGFQNPFPLTTAQVLAQAQYKAHAHAQAQAQAAHAQFQAQLQAQGLSLTQSQNVGGGNVGSPSPGFSTPGLAGVKRIPQKPPVRPPILSPGTTFSPLKTMELTPAARKKKQKLPEKQLQDKVAAILPESALYTQLLEFESRVDAALARKKVDIHEALKNPPCIQKTLRIYVFNTFANQVNTIPKKPNADPPTWTLKIIGRILEDGIDPDHPGVVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIVWENARSPAPHEGFEVKRKGDKEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPNDPSFFHCDPPLQKVFGEDKLKFTMVSQRISQHLFPPQPIHLEHKVKLSGNSPAGTACYDVLVDVPFPIHRELSALLANAEKNKEIDACDEAICTAIRKIHEHRRRRAFFLGFSQSPVEFIDALIESQSKDLKLLAGEASRNAEKERRSDFFNQPWVEDAVIRYINRKPATGSDAPGS 546
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy TrEMBL
Match: A0A0B0MFQ5_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_10982 PE=4 SV=1) HSP 1 Score: 795.038 bits (2052), Expect = 0.000e+0 Identity = 451/536 (84.14%), Postives = 484/536 (90.30%), Query Frame = -2 Query: 556 MSMNGNNPPKNLGASSSPFGNAGMVPPPMPGNPAFSQAQLSAGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGLSLNQAQNAGFGTLXXXXXXXXXXXXXXAKRILQXXXXXXXXXXXMNTMSPLRTMELTAAARRKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPQKPNAEPPTWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLYPDNHIIIWEHARSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKMVAGEPSRSAEKERRSDFFNQSWVEDAVIRYLNRKPPA-GSDAPGS 2160 MS+N NNPPK++GASSSPFGNA A +QAQLSAGFQ QYQLSQAQALA AQ++AQAQ GLSLNQAQNAG G LG+SSPSMSTPGSASAKRILQRPPMRPPGVP+ NTMSPLRTM+LT AAR+KKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAAL RKKVDIQEALKNPPCVQKTLRIYVFNTFANQ++TIP+KPNAEPPTWTLKIIGRILEDGVDPDQP FVQ+TNPLYPKFSSFFKRVTISLDQ+LYP+NHIIIWE ARSP P+EGF+VKRKGDKEFTVNIRLEMNY PEKFKLSSAL+EVLGIEVDTRPRIIAAIWHYVKARKLQNP DPS FNCDAQL KVFGE++VKFTMVSQKISQHLS PPPIHLEHKIKLSGN+PAG+ACYDVLVDVP PIQR+LSALLAN EKSKEI+ CDEAICA IRKIH+H RRRAFFLGFSQSPVEFINAL++SQS+DLK+ +GE SRS+E+ERRSDFFNQ WVEDAVIRYLNRKP A GSDAPGS Sbjct: 1 MSVNNNNPPKSIGASSSPFGNASQ---------AQTQAQLSAGFQNQYQLSQAQALAHAQAQAQAQLAHAQFQAHLQAQ-GLSLNQAQNAGIGNLGTSSPSMSTPGSASAKRILQRPPMRPPGVPVTNTMSPLRTMDLTTAARKKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALTRKKVDIQEALKNPPCVQKTLRIYVFNTFANQMQTIPKKPNAEPPTWTLKIIGRILEDGVDPDQPAFVQKTNPLYPKFSSFFKRVTISLDQRLYPENHIIIWEQARSPAPHEGFDVKRKGDKEFTVNIRLEMNYAPEKFKLSSALVEVLGIEVDTRPRIIAAIWHYVKARKLQNPNDPSCFNCDAQLMKVFGEEKVKFTMVSQKISQHLSSPPPIHLEHKIKLSGNNPAGSACYDVLVDVPLPIQRDLSALLANAEKSKEIEQCDEAICAAIRKIHEHRRRRAFFLGFSQSPVEFINALIESQSRDLKLASGEASRSSERERRSDFFNQPWVEDAVIRYLNRKPGAGGSDAPGS 526
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy TrEMBL
Match: B9GJS7_POPTR (SWIB complex BAF60b domain-containing family protein OS=Populus trichocarpa GN=POPTR_0001s33890g PE=4 SV=1) HSP 1 Score: 792.727 bits (2046), Expect = 0.000e+0 Identity = 424/544 (77.94%), Postives = 464/544 (85.29%), Query Frame = -2 Query: 553 PPKNLGASSSPFGNAGMVPPPMPGNPAF--SQAQLSAGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ-------------GLSLNQAQNAGFGTLXXXXXXXXXXXXXXAKRILQXXXXXXXXXXXMNTMSPLRTMELTAAARRKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPQKPNAEPPTWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLYPDNHIIIWEHARSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKMVAGEPSRSAEKERRSDFFNQSWVEDAVIRYLNRKPPAGSDAPGSI 2139 PPK+LG SSSPFGN+GMV P M NP F +QAQ+ AGFQ QA A AQ Q Q G+SLNQ Q+AG G LGSSSPS STPG+ASAKR+ Q+P RPPGVPM + +SPL+ M+L++AARRKKQKLPEKQLQDRVAAILPESALYTQLLEFE RVDAALARKKVDIQEALK+PPCVQKTLRIYVFNTFANQI+TIP+KPNA+PPTWTLK+IGRILEDGVDPDQPG VQ++NPLYPKFSSFFKRV+I LDQ+LYPDNHIIIWEHARSP P+EGFEVKRKGDKEF+VNIRLEMNYVPEKFKLS ALMEVLGIEV+TRPRIIAAIWHYVKARKLQNP DPSFFNCDA LQKVFGE ++KFTMVSQ+ISQHLSPP PIHLEHKIKLSGNSPAG CYDV+VDVPFPIQRELSALLAN EK+KEID CDEAIC IRKIH+H RRRAFFLGFSQSPVEF+NAL++SQS+DLK+VAGE SR+AEKERRSDFFNQ WVEDAVIRYLNRKP AGSDAP S+ Sbjct: 12 PPKSLGQSSSPFGNSGMVNPSMGANPTFPQAQAQMGAGFQGGQFQLSQAQATLQAHLKAQQAHAQAQAAHAAQVQAAHAQFQAQLQAQGVSLNQNQSAGIGNLGSSSPSFSTPGNASAKRLPQKPLGRPPGVPMSSMVSPLKPMDLSSAARRKKQKLPEKQLQDRVAAILPESALYTQLLEFETRVDAALARKKVDIQEALKSPPCVQKTLRIYVFNTFANQIRTIPKKPNADPPTWTLKVIGRILEDGVDPDQPGAVQKSNPLYPKFSSFFKRVSIQLDQRLYPDNHIIIWEHARSPAPHEGFEVKRKGDKEFSVNIRLEMNYVPEKFKLSPALMEVLGIEVETRPRIIAAIWHYVKARKLQNPEDPSFFNCDAPLQKVFGESKMKFTMVSQRISQHLSPPQPIHLEHKIKLSGNSPAGTVCYDVVVDVPFPIQRELSALLANAEKNKEIDTCDEAICTAIRKIHEHRRRRAFFLGFSQSPVEFVNALIESQSKDLKLVAGEASRNAEKERRSDFFNQPWVEDAVIRYLNRKPAAGSDAPRSM 555
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy TrEMBL
Match: A0A061EEG0_THECC (Chromatin remodeling complex subunit isoform 2 OS=Theobroma cacao GN=TCM_017181 PE=4 SV=1) HSP 1 Score: 792.727 bits (2046), Expect = 0.000e+0 Identity = 393/425 (92.47%), Postives = 409/425 (96.24%), Query Frame = -2 Query: 556 KRILQXXXXXXXXXXXMNTMSPLRTMELTAAARRKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPQKPNAEPPTWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLYPDNHIIIWEHARSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKMVAGEPSRSAEKERRSDFFNQSWVEDAVIRYLNRKPPAGSDAPGS 1830 KRILQ+PP+RPPGVPM NTMSPLRTMELT AARRKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIP+KPNAEPP WTLKIIGRILEDGVDPDQPGFVQ+TNPLYPKFSSFFK+VTISLDQ+LYP+NHIIIWEHARSP P+EGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNP DPSFFNCDAQLQKVFGED+VKFTMVSQKISQHL+ PPPIHLEHKIKLSGN P G ACYDVLVDVPFPIQRELSALLAN EKSKEIDACDEAICA IRKIH+H RRRAFFLGFSQSPVEFINAL++SQS+DLK+VAGE SRS E+ERRSDFFNQ WVEDAVIRYLNRKP AGSDAPGS Sbjct: 8 KRILQKPPVRPPGVPMTNTMSPLRTMELTPAARRKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPKKPNAEPPMWTLKIIGRILEDGVDPDQPGFVQKTNPLYPKFSSFFKKVTISLDQRLYPENHIIIWEHARSPAPHEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPNDPSFFNCDAQLQKVFGEDKVKFTMVSQKISQHLASPPPIHLEHKIKLSGNGPVGTACYDVLVDVPFPIQRELSALLANAEKSKEIDACDEAICAAIRKIHEHRRRRAFFLGFSQSPVEFINALIESQSRDLKLVAGEASRSVERERRSDFFNQPWVEDAVIRYLNRKPAAGSDAPGS 432
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy TrEMBL
Match: A0A0D2RMA6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G0414002 PE=4 SV=1) HSP 1 Score: 790.415 bits (2040), Expect = 0.000e+0 Identity = 450/536 (83.96%), Postives = 482/536 (89.93%), Query Frame = -2 Query: 556 MSMNGNNPPKNLGASSSPFGNAGMVPPPMPGNPAFSQAQLSAGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGLSLNQAQNAGFGTLXXXXXXXXXXXXXXAKRILQXXXXXXXXXXXMNTMSPLRTMELTAAARRKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPQKPNAEPPTWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLYPDNHIIIWEHARSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKMVAGEPSRSAEKERRSDFFNQSWVEDAVIRYLNRKPPA-GSDAPGS 2160 MS+N NNPPK++GASSSPFGNA A +QAQLSAGFQ QYQLSQAQALA AQ++AQAQ GLSLNQAQNAG G LG+SSPSMSTPGSASAKRILQRPPMRPPGVP+ NTMSPLR M+LT AAR+KKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAAL RKKVDIQEALKNPPCVQKTLRIYVFNTFANQ++TIP+KPNAEPPTWTLKIIGRILEDGVDPDQP FVQ+TNPLYPKFSSFFKRVTISLDQ+LYP+NHIIIWE ARSP P+EGFEVKRKGDKEFTVNIRLEMNY PEKFKLSSAL+EVLGIEVDTRPRIIAAIWHYVKARKLQNP DPS F CDAQL KVFGE++VKFTMVSQKISQHLS PPPIHLEHKIKLSGN+PAG+ACYDVLVDVP PIQR+LSALLAN EKSKEI+ CDEAICA IRKIH+H RRRAFFLGFSQSPVEFINAL++SQS+DLK+ +GE SRS+E+ERRSDFFNQ WVEDAVIRYLNRKP A GSDAPGS Sbjct: 1 MSVNNNNPPKSIGASSSPFGNASQ---------AQTQAQLSAGFQNQYQLSQAQALAHAQAQAQAQLAHAQFQAHLQAQ-GLSLNQAQNAGIGNLGTSSPSMSTPGSASAKRILQRPPMRPPGVPVTNTMSPLRIMDLTTAARKKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALTRKKVDIQEALKNPPCVQKTLRIYVFNTFANQMQTIPKKPNAEPPTWTLKIIGRILEDGVDPDQPAFVQKTNPLYPKFSSFFKRVTISLDQRLYPENHIIIWEQARSPAPHEGFEVKRKGDKEFTVNIRLEMNYAPEKFKLSSALVEVLGIEVDTRPRIIAAIWHYVKARKLQNPNDPSCFICDAQLMKVFGEEKVKFTMVSQKISQHLSSPPPIHLEHKIKLSGNNPAGSACYDVLVDVPLPIQRDLSALLANAEKSKEIEQCDEAICAAIRKIHEHRRRRAFFLGFSQSPVEFINALIESQSRDLKLASGEASRSSERERRSDFFNQPWVEDAVIRYLNRKPGAGGSDAPGS 526
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy TrEMBL
Match: A0A0D2SP54_GOSRA (Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_006G0414002 PE=4 SV=1) HSP 1 Score: 787.719 bits (2033), Expect = 0.000e+0 Identity = 449/535 (83.93%), Postives = 481/535 (89.91%), Query Frame = -2 Query: 559 MSMNGNNPPKNLGASSSPFGNAGMVPPPMPGNPAFSQAQLSAGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGLSLNQAQNAGFGTLXXXXXXXXXXXXXXAKRILQXXXXXXXXXXXMNTMSPLRTMELTAAARRKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPQKPNAEPPTWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLYPDNHIIIWEHARSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKMVAGEPSRSAEKERRSDFFNQSWVEDAVIRYLNRKPPA-GSDAPG 2160 MS+N NNPPK++GASSSPFGNA A +QAQLSAGFQ QYQLSQAQALA AQ++AQAQ GLSLNQAQNAG G LG+SSPSMSTPGSASAKRILQRPPMRPPGVP+ NTMSPLR M+LT AAR+KKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAAL RKKVDIQEALKNPPCVQKTLRIYVFNTFANQ++TIP+KPNAEPPTWTLKIIGRILEDGVDPDQP FVQ+TNPLYPKFSSFFKRVTISLDQ+LYP+NHIIIWE ARSP P+EGFEVKRKGDKEFTVNIRLEMNY PEKFKLSSAL+EVLGIEVDTRPRIIAAIWHYVKARKLQNP DPS F CDAQL KVFGE++VKFTMVSQKISQHLS PPPIHLEHKIKLSGN+PAG+ACYDVLVDVP PIQR+LSALLAN EKSKEI+ CDEAICA IRKIH+H RRRAFFLGFSQSPVEFINAL++SQS+DLK+ +GE SRS+E+ERRSDFFNQ WVEDAVIRYLNRKP A GSDAPG Sbjct: 1 MSVNNNNPPKSIGASSSPFGNASQ---------AQTQAQLSAGFQNQYQLSQAQALAHAQAQAQAQLAHAQFQAHLQAQ-GLSLNQAQNAGIGNLGTSSPSMSTPGSASAKRILQRPPMRPPGVPVTNTMSPLRIMDLTTAARKKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALTRKKVDIQEALKNPPCVQKTLRIYVFNTFANQMQTIPKKPNAEPPTWTLKIIGRILEDGVDPDQPAFVQKTNPLYPKFSSFFKRVTISLDQRLYPENHIIIWEQARSPAPHEGFEVKRKGDKEFTVNIRLEMNYAPEKFKLSSALVEVLGIEVDTRPRIIAAIWHYVKARKLQNPNDPSCFICDAQLMKVFGEEKVKFTMVSQKISQHLSSPPPIHLEHKIKLSGNNPAGSACYDVLVDVPLPIQRDLSALLANAEKSKEIEQCDEAICAAIRKIHEHRRRRAFFLGFSQSPVEFINALIESQSRDLKLASGEASRSSERERRSDFFNQPWVEDAVIRYLNRKPGAGGSDAPG 525
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy TrEMBL
Match: A0A067KTG3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04861 PE=4 SV=1) HSP 1 Score: 781.941 bits (2018), Expect = 0.000e+0 Identity = 429/538 (79.74%), Postives = 471/538 (87.55%), Query Frame = -2 Query: 556 PPKNLGASSSPFGNAGMVPPPMPGNPAFSQAQ----LSAGFXXXXXXXXXXXXXXXX------XXXXXXXXXXXXXXXXXXXQGLSLNQAQNAGFGTLXXXXXXXXXXXXXXAKRILQXXXXXXXXXXXMNTMSPLRTMELTAAARRKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPQKPNAEPPTWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLYPDNHIIIWEHARSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKMVAGEPSRSAEKERRSDFFNQSWVEDAVIRYLNRKPPAGSDAPGS 2139 PPK+LG SSSPFGN+GMV P MP N A SQ+Q L GFQ QYQL+QAQA AQA HAQ QA LQAQG++L+QAQ A LG+SSPS STPG+ + KR+ Q+PP+RPPGVPM + +SPL+TM+LT AARRKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAAL RKKVDIQEALKNPPCVQKTLRIYVFNTFANQ +TIP+KPNAEPP+WTLKI+GRILEDG+DPDQPG VQ++NPLYPKFSSFFKRVTI LDQ+LYPDNH+I+WEH+R+P P+EGFEVKRKGDKEFTV IRLEM Y PEK+KLS ALMEVLGIEVDTRPRIIAAIWHYVKARKLQNP DPSFFNCD LQKVFGE ++KFTMVSQKISQHL+PP PI LEHKIKLSGNSPAG ACYDV+VDVPFPIQRELSALLAN EK+KEID CDEAICA IRKIH+H RRRAFFLGFSQSPVEFINAL++SQS+DLK+VAGE SRSAEKERR+DFFNQ WVEDAVIRYLNRKP AGSDAPGS Sbjct: 10 PPKSLGQSSSPFGNSGMVNPSMPINQALSQSQSQGQLGTGFQGQYQLTQAQANAQAHFKAQQAHAQAQAQAVHAQFQAQLQAQGMTLSQAQTAALANLGTSSPSFSTPGNFNVKRLPQKPPVRPPGVPMGSLVSPLKTMDLTPAARRKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALVRKKVDIQEALKNPPCVQKTLRIYVFNTFANQTRTIPKKPNAEPPSWTLKIVGRILEDGIDPDQPGVVQKSNPLYPKFSSFFKRVTIMLDQRLYPDNHMIVWEHSRTPAPHEGFEVKRKGDKEFTVTIRLEMYYAPEKYKLSPALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPEDPSFFNCDPPLQKVFGEAKMKFTMVSQKISQHLAPPQPIVLEHKIKLSGNSPAGTACYDVVVDVPFPIQRELSALLANAEKNKEIDTCDEAICAAIRKIHEHRRRRAFFLGFSQSPVEFINALIESQSKDLKLVAGEASRSAEKERRADFFNQPWVEDAVIRYLNRKPTAGSDAPGS 547
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy TrEMBL
Match: W9SAK8_9ROSA (SWI/SNF complex component SNF12-like protein OS=Morus notabilis GN=L484_010762 PE=4 SV=1) HSP 1 Score: 776.548 bits (2004), Expect = 0.000e+0 Identity = 425/551 (77.13%), Postives = 456/551 (82.76%), Query Frame = -2 Query: 556 MSMNGNNPPKNLGASSSPFGNAGMVPPPMPGNPAF--------------SQAQLSAGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGLSLNQAQN-AGFGTLXXXXXXXXXXXXXXAKRILQXXXXXXXXXXXMNTMSPLRTMELT-AAARRKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPQKPNAEPPTWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLYPDNHIIIWEHARSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKMVAGEPSRSAEKERRSDFFNQSWVEDAVIRYLNRKPPAGSDAPGS 2160 MS N NNPPK+LGASSSPFGNA MV P M GNP F +Q QLS Q AHAQ QAHLQAQGL+LNQ Q A G+ SP +S GSA KRI Q+PP+RPPG+ MSPLRTMELT AAARRKKQKLPEKQLQD+VAAILPESALYTQLLEFEARVDAAL RKKVDIQEALK P CVQKTLRIYVFNTFANQI+TIPQKPNAEPPTWTLKI+GR+LEDG+DPDQPG VQ+TNPLYPKFSSFFKRVTISLDQ+LYPDNHIIIWE+AR+P P+EGFEV+RKGDKEFTVNIRLEMNYVPEKFKLS L++VLGIEVDTRPRIIAAIW YVKARKLQNP+DPSFFNCD LQKVFGED++KFTMVSQKISQHL PP PIHLEHKIKLSGNSP G ACYDVLVDVPFPIQRELS LLAN EK KEID+CDEAICA IRKIH+H RRRAFFLGFSQSPVEFIN L++SQS+DLK+V GE SRSAEKERR+DFFNQ WVEDAVIRYLNRKP GSDAPGS Sbjct: 1 MSANSNNPPKSLGASSSPFGNANMVAPNMGGNPNFPQSQAQAQIAAGFQNQFQLSQ-----AQAIAQAQSKAQAHAQAQVQAAHAQFQAHLQAQGLTLNQNQGIANMGS----SPGLSNTGSAGMKRIPQKPPVRPPGLTSPTMMSPLRTMELTPAAARRKKQKLPEKQLQDKVAAILPESALYTQLLEFEARVDAALNRKKVDIQEALKTPHCVQKTLRIYVFNTFANQIRTIPQKPNAEPPTWTLKIVGRLLEDGIDPDQPGVVQKTNPLYPKFSSFFKRVTISLDQRLYPDNHIIIWENARTPAPHEGFEVRRKGDKEFTVNIRLEMNYVPEKFKLSQPLVDVLGIEVDTRPRIIAAIWQYVKARKLQNPHDPSFFNCDPPLQKVFGEDKMKFTMVSQKISQHLFPPQPIHLEHKIKLSGNSPVGTACYDVLVDVPFPIQRELSVLLANAEKCKEIDSCDEAICAAIRKIHEHRRRRAFFLGFSQSPVEFINTLIESQSKDLKLVTGEGSRSAEKERRADFFNQPWVEDAVIRYLNRKPVTGSDAPGS 542
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy TrEMBL
Match: K7KP05_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 772.311 bits (1993), Expect = 0.000e+0 Identity = 430/545 (78.90%), Postives = 474/545 (86.97%), Query Frame = -2 Query: 556 MSMNGNNPPKNLGASSSPFGNAGMVPPPMPGNPAFSQ----AQLSAGF------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGLSLNQAQNAGFGTLXXXXXXXXXXXXXXAKRILQXXXXXXXXXXXMNTMSPLRTMELTAAARRKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPQKPNAEPPTWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLYPDNHIIIWEHARSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKMVAGEPSRSAEKERRSDFFNQSWVEDAVIRYLNRKPPAGSDAPGS 2160 MS+N NNP K +GASSS FGNAG+ +P NP FSQ AQ+ GF + + QAQ+ AQAQ++AQA A AHAQLQAHLQAQGLSLNQ Q G G SSPS+STPG+AS KRI +PPMRP G N+ SPLR MELT AARRKKQKLPEKQLQD+VAAILPESALYTQLLEFE+RVDAALARKK DIQEALKNPPC+QKTLRIYVFNTFANQI+TIP+KPN EPPTWTLKI+GRILEDGVDPDQPG VQ+++PLYPKFS+FFKRVTISLDQ+LYPDNHII+WE+ARSP P+EGFEVKRKGDKEFTVNIRLEMNYVPEKFKLS AL EVLGIEVDTRPRI+AAIWHYVKARKLQNP DPS+F+CD LQKVFGE+ +KFTMVSQKIS HL PP PI LEHKIKLSGNSPAG ACYDV+VDVPFPIQRELSALLAN EK+K+I+ CDEAIC IRKIH+H RRRAFFLGFSQSPVEFINAL++SQS+DLK+V+GEPSR+AEKERRSDFFNQ WVEDAVIRYLNRKP AGSDAPGS Sbjct: 1 MSVNNNNPSKGIGASSSTFGNAGIPSNSIPSNPGFSQSQGQAQIPVGFQGQFPLSQAHAIVQAQSKAQAQAQAQAAAAAHAQLQAHLQAQGLSLNQNQAGGLGV---SSPSISTPGNASGKRIPMKPPMRPVGFSPPNSFSPLRPMELTPAARRKKQKLPEKQLQDKVAAILPESALYTQLLEFESRVDAALARKKADIQEALKNPPCIQKTLRIYVFNTFANQIRTIPKKPNVEPPTWTLKIVGRILEDGVDPDQPGVVQKSSPLYPKFSAFFKRVTISLDQRLYPDNHIILWENARSPAPHEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSPALTEVLGIEVDTRPRIVAAIWHYVKARKLQNPNDPSYFHCDPPLQKVFGEENMKFTMVSQKISSHLFPPQPILLEHKIKLSGNSPAGTACYDVMVDVPFPIQRELSALLANVEKNKDIETCDEAICGIIRKIHEHRRRRAFFLGFSQSPVEFINALIESQSRDLKLVSGEPSRNAEKERRSDFFNQPWVEDAVIRYLNRKPAAGSDAPGS 542
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy TrEMBL
Match: A0A0B2Q1F0_GLYSO (SWI/SNF complex component SNF12 like OS=Glycine soja GN=glysoja_044905 PE=4 SV=1) HSP 1 Score: 772.311 bits (1993), Expect = 0.000e+0 Identity = 430/545 (78.90%), Postives = 474/545 (86.97%), Query Frame = -2 Query: 556 MSMNGNNPPKNLGASSSPFGNAGMVPPPMPGNPAFSQ----AQLSAGF------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGLSLNQAQNAGFGTLXXXXXXXXXXXXXXAKRILQXXXXXXXXXXXMNTMSPLRTMELTAAARRKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPQKPNAEPPTWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLYPDNHIIIWEHARSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKMVAGEPSRSAEKERRSDFFNQSWVEDAVIRYLNRKPPAGSDAPGS 2160 MS+N NNP K +GASSS FGNAG+ +P NP FSQ AQ+ GF + + QAQ+ AQAQ++AQA A AHAQLQAHLQAQGLSLNQ Q G G SSPS+STPG+AS KRI +PPMRP G N+ SPLR MELT AARRKKQKLPEKQLQD+VAAILPESALYTQLLEFE+RVDAALARKK DIQEALKNPPC+QKTLRIYVFNTFANQI+TIP+KPN EPPTWTLKI+GRILEDGVDPDQPG VQ+++PLYPKFS+FFKRVTISLDQ+LYPDNHII+WE+ARSP P+EGFEVKRKGDKEFTVNIRLEMNYVPEKFKLS AL EVLGIEVDTRPRI+AAIWHYVKARKLQNP DPS+F+CD LQKVFGE+ +KFTMVSQKIS HL PP PI LEHKIKLSGNSPAG ACYDV+VDVPFPIQRELSALLAN EK+K+I+ CDEAIC IRKIH+H RRRAFFLGFSQSPVEFINAL++SQS+DLK+V+GEPSR+AEKERRSDFFNQ WVEDAVIRYLNRKP AGSDAPGS Sbjct: 1 MSVNNNNPSKGIGASSSTFGNAGIPSNSIPSNPGFSQSQGQAQIPVGFQGQFPLSQAHAIVQAQSKAQAQAQAQAAAAAHAQLQAHLQAQGLSLNQNQAGGLGV---SSPSISTPGNASGKRIPMKPPMRPVGFSPPNSFSPLRPMELTPAARRKKQKLPEKQLQDKVAAILPESALYTQLLEFESRVDAALARKKADIQEALKNPPCIQKTLRIYVFNTFANQIRTIPKKPNVEPPTWTLKIVGRILEDGVDPDQPGVVQKSSPLYPKFSAFFKRVTISLDQRLYPDNHIILWENARSPAPHEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSPALTEVLGIEVDTRPRIVAAIWHYVKARKLQNPNDPSYFHCDPPLQKVFGEENMKFTMVSQKISSHLFPPQPILLEHKIKLSGNSPAGTACYDVMVDVPFPIQRELSALLANVEKNKDIETCDEAICGIIRKIHEHRRRRAFFLGFSQSPVEFINALIESQSRDLKLVSGEPSRNAEKERRSDFFNQPWVEDAVIRYLNRKPAAGSDAPGS 542
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy Swiss-Prot
Match: SNF12_ARATH (SWI/SNF complex component SNF12 homolog OS=Arabidopsis thaliana GN=At5g14170 PE=1 SV=1) HSP 1 Score: 751.895 bits (1940), Expect = 0.000e+0 Identity = 407/537 (75.79%), Postives = 467/537 (86.96%), Query Frame = -2 Query: 556 MSMNGNNPPKNLGASSSPFGNAGMVPPPMPGNPAFSQAQLSAGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGLSLNQAQNA-GFGTLXXXXXXXXXXXXXXAKRILQXXXXXXXXX-XXMNTMSPLRTMELTAAARRKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPQKPNAEPPTWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLYPDNHIIIWEHARSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKMVAGEPSRSAEKERRSDFFNQSWVEDAVIRYLNRKPPAGSDAPGS 2160 MS N NNP K G++ PFGN GM +PGN F+Q+ ++A +Q + AQA + AQAQ++ AQLQA LQAQG+++NQAQ + G G LG SSPS++TPGS + KR Q+PPMRPPG NT+SP+RTMELT AAR+KKQKLPEK LQ+RVAAILPESALYTQLLEFE+RVDAAL RKKVDIQEALKNPPC+QKTLRIYVFN+FANQ TIP PNA+PPTWTLKIIGRILEDGVDPDQPGFVQ+ NPL+PKFSSFFKRVT+SLDQ+LYP+N +IIWE+ARSP P EGFE+KRKG++EF +IRLEMNYVPEKFKLS+ALM+VLGIEV+TRPRIIAAIWHYVKARKLQNP DPSFFNCDA LQKVFGE+++KFTMVSQKIS HLSPPPPIHLEHKIKLSGN+PA +ACYDVLVDVPFPIQR+L+ LLAN EK+KEI+ACDEAICA IRKIH+H RRRAFFLGFSQSPVEFINAL++SQS+DLK+VAGE SR+AE+ERRSDFFNQ WVEDAVIRYLNR+P AG+D PGS Sbjct: 1 MSGNNNNPQKPQGSAPLPFGNPGMASASVPGNQGFAQSHMAAN----FQAQFQFSQAQALAHAQAQSKVQAQLQAQLQAQGMTMNQAQGSPGIGGLGPSSPSLTTPGSLNMKRFQQKPPMRPPGAPASNNTISPMRTMELTPAARKKKQKLPEKSLQERVAAILPESALYTQLLEFESRVDAALTRKKVDIQEALKNPPCIQKTLRIYVFNSFANQNNTIPGNPNADPPTWTLKIIGRILEDGVDPDQPGFVQKANPLHPKFSSFFKRVTVSLDQRLYPENPLIIWENARSPAPQEGFEIKRKGNQEFAASIRLEMNYVPEKFKLSTALMDVLGIEVETRPRIIAAIWHYVKARKLQNPNDPSFFNCDAALQKVFGEEKLKFTMVSQKISHHLSPPPPIHLEHKIKLSGNNPAVSACYDVLVDVPFPIQRDLNNLLANAEKNKEIEACDEAICAAIRKIHEHRRRRAFFLGFSQSPVEFINALIESQSKDLKVVAGEASRNAERERRSDFFNQPWVEDAVIRYLNRRPAAGNDGPGS 533
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy Swiss-Prot
Match: SMRD1_MOUSE (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 OS=Mus musculus GN=Smarcd1 PE=1 SV=3) HSP 1 Score: 273.478 bits (698), Expect = 1.639e-80 Identity = 149/385 (38.70%), Postives = 219/385 (56.88%), Query Frame = -2 Query: 586 KKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPQKPNAEPPTWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLY-PDNHIIIWEHARSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKM---VAGEPSRSAEKERRSDFFNQSWVEDAVIRYLNRK 1728 KK+K+ +K L R+ ++PES Y LL FE ++D + RK++DIQEALK P ++ LRI++ NTF N K+ + +W L++ GR+LED Q+ KFSSFFK + I LD+ LY PDNH++ W + +GF+VKR GD + L ++Y P +FKL L +LGI TRP II A+W Y+K KLQ+P++ F CD LQ++F R+KF+ + Q++ L PP PI + H I + N ACYD+ V+V ++ ++++ L + +EI D I TI I+ +R F L F++ P FIN +QSQ +DLK V G P E+ERR++F+ Q W ++AV RY K Sbjct: 124 KKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRIFISNTF-NPAKSDAEDGEGTVASWELRVEGRLLEDAALSKYDATKQKR-----KFSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVLCDKYLQQIFESQRMKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIATLDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNP----EEERRAEFYFQPWAQEAVCRYFYSK 498
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy Swiss-Prot
Match: SMRD1_HUMAN (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 OS=Homo sapiens GN=SMARCD1 PE=1 SV=2) HSP 1 Score: 273.092 bits (697), Expect = 1.674e-80 Identity = 149/385 (38.70%), Postives = 219/385 (56.88%), Query Frame = -2 Query: 586 KKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPQKPNAEPPTWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLY-PDNHIIIWEHARSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKM---VAGEPSRSAEKERRSDFFNQSWVEDAVIRYLNRK 1728 KK+K+ +K L R+ ++PES Y LL FE ++D + RK++DIQEALK P ++ LRI++ NTF N K+ + +W L++ GR+LED Q+ KFSSFFK + I LD+ LY PDNH++ W + +GF+VKR GD + L ++Y P +FKL L +LGI TRP II A+W Y+K KLQ+P++ F CD LQ++F R+KF+ + Q++ L PP PI + H I + N ACYD+ V+V ++ ++++ L + +EI D I TI I+ +R F L F++ P FIN +QSQ +DLK V G P E+ERR++F+ Q W ++AV RY K Sbjct: 124 KKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRIFISNTF-NPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKR-----KFSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIATLDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNP----EEERRAEFYFQPWAQEAVCRYFYSK 498
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy Swiss-Prot
Match: SMRD1_BOVIN (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 OS=Bos taurus GN=SMARCD1 PE=2 SV=1) HSP 1 Score: 269.626 bits (688), Expect = 4.400e-79 Identity = 146/382 (38.22%), Postives = 219/382 (57.33%), Query Frame = -2 Query: 586 KKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPQKPNAEPPTWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLY-PDNHIIIWEHARSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKMVAGEPSRSAEKERRSDFFNQSWVEDAVIRYLNRK 1728 KK+K+ +K L R+ ++PES Y LL FE ++D + RK++DIQEALK P ++ LRI++ NTF N K+ + +W L++ GR+LED Q+ KFSSFFK + I LD+ LY PDNH++ W + +GF+VKR GD + L ++Y P +FKL L +LGI TRP II A+W Y+K KLQ+P++ F CD LQ++F R+KF+ + Q++ L PP PI + H I + N ACYD+ +V ++ ++++ L + +EI D I TI I+ +R F L F++ P FIN +QSQ +DLK V + ++E+ERR++F+ Q W ++AV RY K Sbjct: 124 KKKKMADKILPQRIRELVPESQDYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRIFISNTF-NPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKR-----KFSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDEEVDDTLKTQMNSFLLSTASQQEIATLDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLK-VMTDVVGNSEEERRAEFYFQPWAQEAVCRYFYSK 498
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy Swiss-Prot
Match: BAP60_DROME (Brahma-associated protein of 60 kDa OS=Drosophila melanogaster GN=Bap60 PE=1 SV=1) HSP 1 Score: 268.085 bits (684), Expect = 1.293e-78 Identity = 145/379 (38.26%), Postives = 220/379 (58.05%), Query Frame = -2 Query: 595 LPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPQKPNAEPPTWTLKIIGRILEDGV-DPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLY-PDNHIIIWEHARSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKM---VAGEPSRSAEKERRSDFFNQSWVEDAVIRYL 1716 L EK L +V ++PES Y LL FE ++DA + RK++DIQEALK P ++ LRI++ NTF + +W L++ GR+LEDG DP+ + KFSSFFK + I LD++LY PDNH++ W + +GF+VKR GD+ I L ++Y P +FKL L +LG+ TRP II+A+W Y+K KLQ+ ++ + NCD L+++F R+KF + Q+++ L PP PI + H I+ SG ACYD+ V+V ++ ++++ L + +EI D I T+ I+ R FFL F++ P FI+ + S+++DLK+ VAG P E+ERR++F+ Q W +AV RY Sbjct: 130 LAEKILPQKVRDLVPESQAYMDLLTFERKLDATIMRKRLDIQEALKRPMKQKRKLRIFISNTFYPSKEPTNDGEEGAVASWELRVEGRLLEDGKGDPN--------TKIKRKFSSFFKSLVIELDKELYGPDNHLVEWHRTHTTQETDGFQVKRPGDRNVRCTILLLLDYQPLQFKLDPRLARLLGVHTQTRPVIISALWQYIKTHKLQDAHEREYINCDKYLEQIFSCQRMKFAEIPQRLNPLLHPPDPIVINHFIE-SGAENKQTACYDIDVEVDDTLKNQMNSFLMSTASQQEIQGLDTKIHETVDTINQMKTNREFFLSFAKDPQMFIHRWIISETRDLKLMTDVAGNP----EEERRAEFYYQPWTHEAVSRYF 495
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy Swiss-Prot
Match: SMRD3_MOUSE (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 OS=Mus musculus GN=Smarcd3 PE=1 SV=2) HSP 1 Score: 264.233 bits (674), Expect = 1.585e-77 Identity = 154/398 (38.69%), Postives = 232/398 (58.29%), Query Frame = -2 Query: 595 TAAARR---KKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPQKPNAEPP-----TWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLY-PDNHIIIWEHARSPTPNE--GFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKM---VAGEPSRSAEKERRSDFFNQSWVEDAVIRYL 1746 TA AR K++K+ +K L R+ ++PES Y LL FE ++D + RK+VDIQEALK P ++ LR+Y+ NTF P KP+AE +W L++ G++L+D P +R KFSSFFK + I LD+ LY PDNH++ W R+PT E GF+VKR GD + L ++Y P +FKL L +LG+ +R I+ A+W YVK +LQ+ +D + N D Q++F R+KF+ + Q+++ L PP PI + H I + + ACYD+ V+V P++ ++S+ L + +EI A D I TI I+ +R F L FS+ P ++ L++SQS+DLK+ VAG P E+ERR++F++Q W ++AV RY Sbjct: 90 TAPARSRSAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLRLYISNTFN------PAKPDAEDSDGSIASWELRVEGKLLDD------PSKQKR------KFSSFFKSLVIELDKDLYGPDNHLVEWH--RTPTTQETDGFQVKRPGDLSVRCTLLLMLDYQPPQFKLDPRLARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQIFDCPRLKFSEIPQRLTALLLPPDPIVINHVISVDPSDQKKTACYDIDVEVEEPLKGQMSSFLLSTANQQEISALDSKIHETIESINQLKIQRDFMLSFSRDPKGYVQDLLRSQSRDLKVMTDVAGNP----EEERRAEFYHQPWSQEAVSRYF 463
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy Swiss-Prot
Match: SMRD3_HUMAN (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 OS=Homo sapiens GN=SMARCD3 PE=1 SV=1) HSP 1 Score: 264.233 bits (674), Expect = 1.585e-77 Identity = 154/398 (38.69%), Postives = 232/398 (58.29%), Query Frame = -2 Query: 595 TAAARR---KKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPQKPNAEPP-----TWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLY-PDNHIIIWEHARSPTPNE--GFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKM---VAGEPSRSAEKERRSDFFNQSWVEDAVIRYL 1746 TA AR K++K+ +K L R+ ++PES Y LL FE ++D + RK+VDIQEALK P ++ LR+Y+ NTF P KP+AE +W L++ G++L+D P +R KFSSFFK + I LD+ LY PDNH++ W R+PT E GF+VKR GD + L ++Y P +FKL L +LG+ +R I+ A+W YVK +LQ+ +D + N D Q++F R+KF+ + Q+++ L PP PI + H I + + ACYD+ V+V P++ ++S+ L + +EI A D I TI I+ +R F L FS+ P ++ L++SQS+DLK+ VAG P E+ERR++F++Q W ++AV RY Sbjct: 90 TAPARSRSAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLRLYISNTFN------PAKPDAEDSDGSIASWELRVEGKLLDD------PSKQKR------KFSSFFKSLVIELDKDLYGPDNHLVEWH--RTPTTQETDGFQVKRPGDLSVRCTLLLMLDYQPPQFKLDPRLARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQIFDCPRLKFSEIPQRLTALLLPPDPIVINHVISVDPSDQKKTACYDIDVEVEEPLKGQMSSFLLSTANQQEISALDSKIHETIESINQLKIQRDFMLSFSRDPKGYVQDLLRSQSRDLKVMTDVAGNP----EEERRAEFYHQPWSQEAVSRYF 463
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy Swiss-Prot
Match: SMRD2_MOUSE (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 OS=Mus musculus GN=Smarcd2 PE=2 SV=2) HSP 1 Score: 243.432 bits (620), Expect = 1.963e-69 Identity = 139/398 (34.92%), Postives = 225/398 (56.53%), Query Frame = -2 Query: 595 AARR--KKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTF---------ANQIKTIPQKPNAEP-PTWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLY-PDNHIIIWEHARSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKMVA---GEPSRSAEKERRSDFFNQSWVEDAVIRYL 1740 A RR K++K+ +K L R+ ++PES Y LL FE ++D +ARK+++IQEA+K P ++ LRIY+ NTF A T P A+ +W L++ G++L+D P +R KFSSFFK + I LD++LY PDNH++ W + +GF+VKR GD + L +++ P ++KL L +LG+ TR I+ A+W Y+K +LQ+ ++ + NC+ +++F R++F+ + K++ L P PI + H I + N ACYD+ V+V P++ ++S LA+ +EI + D I TI I+ +R F L FS P +FI ++SQ +DLK++ G P E+ERR+ F++Q W ++AV R++ Sbjct: 130 AQRRGLKRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPLTQKRKLRIYISNTFSPSKADGDNAGTAGTPGGTPAADKVASWELRVEGKLLDD------PSKQKR------KFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFRQIFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQMSNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTEPQDFIQEWLRSQRRDLKIITDVIGNP----EEERRAAFYHQPWAQEAVGRHI 511
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy Swiss-Prot
Match: SMRD2_RAT (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 OS=Rattus norvegicus GN=Smarcd2 PE=2 SV=3) HSP 1 Score: 243.047 bits (619), Expect = 3.627e-69 Identity = 137/398 (34.42%), Postives = 223/398 (56.03%), Query Frame = -2 Query: 595 AARR--KKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFA-----NQIKTIPQKPNAEPP-----TWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLY-PDNHIIIWEHARSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKMVA---GEPSRSAEKERRSDFFNQSWVEDAVIRYL 1740 A RR K++K+ +K L R+ ++PES Y LL FE ++D +ARK+++IQEA+K P ++ LRIY+ NTF+ P P +W L++ G++L+D P +R KFSSFFK + I LD++LY PDNH++ W + +GF+VKR GD + L +++ P ++KL L +LG+ TR I+ A+W Y+K +LQ+ ++ + NC+ +++F R++F+ + K++ L P PI + H I + N ACYD+ V+V P++ ++S LA+ +EI + D I TI I+ +R F L FS P +FI ++SQ +DLK++ G P E+ERR+ F++Q W ++AV R++ Sbjct: 130 AQRRGLKRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPLTQKRKLRIYISNTFSPSKADGDNSGTAGTPGGTPAADKVASWELRVEGKLLDD------PSKQKR------KFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFRQIFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQMSNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTEPQDFIQEWLRSQRRDLKIITDVIGNP----EEERRAAFYHQPWAQEAVGRHI 511
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy Swiss-Prot
Match: SMRD2_HUMAN (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 OS=Homo sapiens GN=SMARCD2 PE=1 SV=3) HSP 1 Score: 242.276 bits (617), Expect = 5.315e-69 Identity = 137/398 (34.42%), Postives = 223/398 (56.03%), Query Frame = -2 Query: 595 AARR--KKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFA-----NQIKTIPQKPNAEPP-----TWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLY-PDNHIIIWEHARSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKMVA---GEPSRSAEKERRSDFFNQSWVEDAVIRYL 1740 A RR K++K+ +K L R+ ++PES Y LL FE ++D +ARK+++IQEA+K P ++ LRIY+ NTF+ P P +W L++ G++L+D P +R KFSSFFK + I LD++LY PDNH++ W + +GF+VKR GD + L +++ P ++KL L +LG+ TR I+ A+W Y+K +LQ+ ++ + NC+ +++F R++F+ + K++ L P PI + H I + N ACYD+ V+V P++ ++S LA+ +EI + D I TI I+ +R F L FS P +FI ++SQ +DLK++ G P E+ERR+ F++Q W ++AV R++ Sbjct: 130 AQRRGLKRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPLTQKRKLRIYISNTFSPSKAEGDSAGTAGTPGGTPAGDKVASWELRVEGKLLDD------PSKQKR------KFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFRQIFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQMSNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTDPQDFIQEWLRSQRRDLKIITDVIGNP----EEERRAAFYHQPWAQEAVGRHI 511 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 14
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0021561 ID=g.arboreum_cottongen_reftransV1_0021561; Name=g.arboreum_cottongen_reftransV1_0021561; organism=Gossypium arboreum; type=contig; length=2287bpback to top |