g.arboreum_cottongen_reftransV1_0021561, g.arboreum_cottongen_reftransV1_0021561 (contig) Gossypium arboreum
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy TrEMBL
Match: A0A0B0N8G3_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_15958 PE=4 SV=1) HSP 1 Score: 894.804 bits (2311), Expect = 0.000e+0 Identity = 506/536 (94.40%), Postives = 520/536 (97.01%), Query Frame = -2 Query: 553 MSMNGNNPPKNLGASSSPFGNAGMVPPPMPGNPAFSQAQLSAGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGLSLNQAQNAGFGTLXXXXXXXXXXXXXXAKRILQXXXXXXXXXXXMNTMSPLRTMELTAAARRKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPQKPNAEPPTWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLYPDNHIIIWEHARSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKMVAGEPSRSAEKERRSDFFNQSWVEDAVIRYLNRKPPAGSDAPGSI 2160 MSMNGNNPPKNLGASSSPFGNAGMVPPPMPGNPAFSQAQLSAGFQAQYQLSQAQALAQAQSKAQAQAQAHAQLQAHLQAQGLSLNQAQNAGFGTLGSSSPSMSTPGSASAKRILQRPPMRPPGVPMMNTMSPLRTMELTAAARRKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPQKPNAEPPTWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLYPDNHIIIWEHARSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQ+P DP+ FNCDAQL KVFGE++VKFTMV KISQHLS PPPIHLEHK+KLSGNSP GN CYDVLVD+PFPIQRELSALL+N EKSKEI+ CDEAICA IRKIH+H RRRAFFLGFSQSPVEFINAL++SQS D+K+VAGE SRS+EKERRSDFFNQ WVEDAVIRYLNRKP AGSDAPGSI Sbjct: 1 MSMNGNNPPKNLGASSSPFGNAGMVPPPMPGNPAFSQAQLSAGFQAQYQLSQAQALAQAQSKAQAQAQAHAQLQAHLQAQGLSLNQAQNAGFGTLGSSSPSMSTPGSASAKRILQRPPMRPPGVPMMNTMSPLRTMELTAAARRKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPQKPNAEPPTWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLYPDNHIIIWEHARSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQSPNDPTSFNCDAQLHKVFGEEKVKFTMVPLKISQHLSRPPPIHLEHKVKLSGNSPVGNVCYDVLVDLPFPIQRELSALLSNAEKSKEIETCDEAICAAIRKIHEHRRRRAFFLGFSQSPVEFINALIESQSLDVKLVAGEASRSSEKERRSDFFNQPWVEDAVIRYLNRKPTAGSDAPGSI 536
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy TrEMBL
Match: A0A0D2QWK6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G270700 PE=4 SV=1) HSP 1 Score: 885.174 bits (2286), Expect = 0.000e+0 Identity = 503/536 (93.84%), Postives = 518/536 (96.64%), Query Frame = -2 Query: 553 MSMNGNNPPKNLGASSSPFGNAGMVPPPMPGNPAFSQAQLSAGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGLSLNQAQNAGFGTLXXXXXXXXXXXXXXAKRILQXXXXXXXXXXXMNTMSPLRTMELTAAARRKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPQKPNAEPPTWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLYPDNHIIIWEHARSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKMVAGEPSRSAEKERRSDFFNQSWVEDAVIRYLNRKPPAGSDAPGSI 2160 MSMNGNNPPKNL SSSPFGNAGMVPPPMPGNPAFSQAQLSAGFQAQYQLSQAQALAQAQSKAQAQAQAHAQLQAHLQAQGLSLNQAQNAGFGTLGSSSPSMSTPGSASAKRILQRPPMRPPGVPMMNTMSPLRTMELT AARRKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPQKPNAEPPTWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQ+LYPDNHIIIWEHARSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQ+P DP+ FNCDAQL KVFGE++VKFTMV KISQHLSPPPPIHLEHK+KLSGNSP GN CYDVLVD+PFPIQRELSALL+N EKSKEI+ CDEAICA IRKIH+H RRRAFFLGFSQSPVEFINAL++SQS D+K+VAGE SRS+EKERRSDFFNQ WVEDAVIRYLNRKP AGSDAPGSI Sbjct: 1 MSMNGNNPPKNL--SSSPFGNAGMVPPPMPGNPAFSQAQLSAGFQAQYQLSQAQALAQAQSKAQAQAQAHAQLQAHLQAQGLSLNQAQNAGFGTLGSSSPSMSTPGSASAKRILQRPPMRPPGVPMMNTMSPLRTMELTDAARRKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPQKPNAEPPTWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQRLYPDNHIIIWEHARSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQSPNDPTSFNCDAQLHKVFGEEKVKFTMVPLKISQHLSPPPPIHLEHKVKLSGNSPVGNVCYDVLVDLPFPIQRELSALLSNAEKSKEIETCDEAICAAIRKIHEHRRRRAFFLGFSQSPVEFINALIESQSLDVKLVAGEASRSSEKERRSDFFNQPWVEDAVIRYLNRKPAAGSDAPGSI 534
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy TrEMBL
Match: A0A0B0P5P1_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_27390 PE=4 SV=1) HSP 1 Score: 864.374 bits (2232), Expect = 0.000e+0 Identity = 482/551 (87.48%), Postives = 498/551 (90.38%), Query Frame = -2 Query: 553 MSMNGNNPPKNLGASSSPFGNAGMVPPPMPGNPAFSQAQ----------LSAGFXXXXXXXXXXXXX-----XXXXXXXXXXXXXXXXXXXXXXQGLSLNQAQNAGFGTLXXXXXXXXXXXXXXAKRILQXXXXXXXXXXXMNTMSPLRTMELTAAARRKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPQKPNAEPPTWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLYPDNHIIIWEHARSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKMVAGEPSRSAEKERRSDFFNQSWVEDAVIRYLNRKPPAGSDAPGSI 2160 MSMN NNPPK+LGASSSPF NAGM P NP FSQ Q LSAGFQAQ+QLSQAQALA AHAQ QA LQAQ LSLNQAQNAG G LGS+SPS STPGSAS KRI QRPPMRPPGVPM NTMSPLR MELT AARRKKQKLP+KQLQ+RVAAILPESALYTQLL+ E RVDAA+ARKKVDIQEALKNPP VQKTLRIYVFNTFANQ++TIP+KPNAEPP WTLKIIGRILE+G+DPDQPGFV +TNPLYPKFSSFFKRVTISLDQ+LYPDNHIIIWEHARSPTP EGFEVKRKG+KEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRI+AAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKMVAGEPSRSAEKERRSDFFNQSWVEDAVIRYLNRKPPAGSDAPGSI Sbjct: 1 MSMNNNNPPKSLGASSSPFSNAGM-----PANPVFSQVQAQAQAQVQAQLSAGFQAQFQLSQAQALALAQSKAQALAQAQGQAAHAQFQAQLQAQSLSLNQAQNAGIGNLGSTSPSFSTPGSASVKRIFQRPPMRPPGVPMTNTMSPLRMMELTPAARRKKQKLPDKQLQERVAAILPESALYTQLLDLETRVDAAVARKKVDIQEALKNPPSVQKTLRIYVFNTFANQVQTIPKKPNAEPPMWTLKIIGRILEEGIDPDQPGFVNKTNPLYPKFSSFFKRVTISLDQRLYPDNHIIIWEHARSPTPQEGFEVKRKGEKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRILAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKMVAGEPSRSAEKERRSDFFNQSWVEDAVIRYLNRKPPAGSDAPGSI 546
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy TrEMBL
Match: A0A061ECY9_THECC (Chromatin remodeling complex subunit isoform 1 OS=Theobroma cacao GN=TCM_017181 PE=4 SV=1) HSP 1 Score: 860.522 bits (2222), Expect = 0.000e+0 Identity = 471/546 (86.26%), Postives = 490/546 (89.74%), Query Frame = -2 Query: 556 MSMNGNNPPKNLGASSSPFGNAGMVPPPMPGNPAFSQAQ--LSAGFXXX---------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGLSLNQAQNAGFGTLXXXXXXXXXXXXXXAKRILQXXXXXXXXXXXMNTMSPLRTMELTAAARRKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPQKPNAEPPTWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLYPDNHIIIWEHARSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKMVAGEPSRSAEKERRSDFFNQSWVEDAVIRYLNRKPPAGSDAPGS 2160 MS+N NNPPK+LGASSSPFGNAGMV P M GNPAFSQAQ LSAGFQAQ Q AHAQ QAHLQAQGLSLNQ+QNAG G LGSSSPSMSTPGSA KRILQ+PP+RPPGVPM NTMSPLRTMELT AARRKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIP+KPNAEPP WTLKIIGRILEDGVDPDQPGFVQ+TNPLYPKFSSFFK+VTISLDQ+LYP+NHIIIWEHARSP P+EGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNP DPSFFNCDAQLQKVFGED+VKFTMVSQKISQHL+ PPPIHLEHKIKLSGN P G ACYDVLVDVPFPIQRELSALLAN EKSKEIDACDEAICA IRKIH+H RRRAFFLGFSQSPVEFINAL++SQS+DLK+VAGE SRS E+ERRSDFFNQ WVEDAVIRYLNRKP AGSDAPGS Sbjct: 1 MSVNNNNPPKSLGASSSPFGNAGMVAPSMAGNPAFSQAQAQLSAGFQAQFQLSQVQALAQAQAQAQSKAHAHAQAQAQVAHAQFQAHLQAQGLSLNQSQNAGIGNLGSSSPSMSTPGSA--KRILQKPPVRPPGVPMTNTMSPLRTMELTPAARRKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPKKPNAEPPMWTLKIIGRILEDGVDPDQPGFVQKTNPLYPKFSSFFKKVTISLDQRLYPENHIIIWEHARSPAPHEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPNDPSFFNCDAQLQKVFGEDKVKFTMVSQKISQHLASPPPIHLEHKIKLSGNGPVGTACYDVLVDVPFPIQRELSALLANAEKSKEIDACDEAICAAIRKIHEHRRRRAFFLGFSQSPVEFINALIESQSRDLKLVAGEASRSVERERRSDFFNQPWVEDAVIRYLNRKPAAGSDAPGS 544
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy TrEMBL
Match: A0A0D2RJA9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G091400 PE=4 SV=1) HSP 1 Score: 855.899 bits (2210), Expect = 0.000e+0 Identity = 466/550 (84.73%), Postives = 483/550 (87.82%), Query Frame = -2 Query: 553 MSMNGNNPPKNLGASSSPFGNAGMVPPPMPGNPAF--------------SQAQLSAGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGLSLNQAQNAGFGTLXXXXXXXXXXXXXXAKRILQXXXXXXXXXXXMNTMSPLRTMELTAAARRKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPQKPNAEPPTWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLYPDNHIIIWEHARSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKMVAGEPSRSAEKERRSDFFNQSWVEDAVIRYLNRKPPAGSDAPGSI 2160 MSMN NNPPK+LGASSSPF NAGM PGNP F +Q QLS Q AHAQ QA LQAQ LSLNQAQNAG G +GSSSPS STPGSAS KRI QRPPMRPPGVPM NTMSPLR MELT AARRKKQKLP+KQLQ+RVAAILPESALYTQLL+ E RVDAA+ARKKVDIQEALKNPP VQKTLRIYVFNTFANQ++TIP+KPNAEPP WTLKIIGRILE+G+DPDQPGFV +TNP YPKFSSFFKRVTISLDQ+LYPDNHIIIWEHARSPTP EGFEVKRKG+KEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRI+AAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDV+VDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKMVAGEPSRSAEKERRSDFFNQSWVEDAVIRYLNRKPPAGSDAPGSI Sbjct: 1 MSMNNNNPPKSLGASSSPFSNAGM-----PGNPVFSQAQAQAQLSAGFQAQFQLSQA-----QALALAQSKAQALAQAQGQVAHAQFQAQLQAQSLSLNQAQNAGIGNIGSSSPSFSTPGSASVKRIFQRPPMRPPGVPMTNTMSPLRMMELTPAARRKKQKLPDKQLQERVAAILPESALYTQLLDLETRVDAAVARKKVDIQEALKNPPSVQKTLRIYVFNTFANQLQTIPKKPNAEPPMWTLKIIGRILEEGIDPDQPGFVNKTNPFYPKFSSFFKRVTISLDQRLYPDNHIIIWEHARSPTPQEGFEVKRKGEKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRILAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVVVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKMVAGEPSRSAEKERRSDFFNQSWVEDAVIRYLNRKPPAGSDAPGSI 540
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy TrEMBL
Match: A0A067FKG9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g009056mg PE=4 SV=1) HSP 1 Score: 804.668 bits (2077), Expect = 0.000e+0 Identity = 435/544 (79.96%), Postives = 474/544 (87.13%), Query Frame = -2 Query: 556 MSMNGNNPPKNLGASSSPFGNAGMVPPPMPGNPAF----SQAQLSAGFXXX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGLSLNQAQNAGFGTLXXXXXXXXXXXXXXAKRILQXXXXXXXXXXXMNTMSPLRTMELTAAARRKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPQKPNAEPPTWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLYPDNHIIIWEHARSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKMVAGEPSRSAEKERRSDFFNQSWVEDAVIRYLNRKPPAGSDAPGS 2160 MS N NNP K+LG +SSPF NAGM P MP NP F +QAQ+ AGF +Q Q ++ ++ AHAQLQAHLQAQGLS+NQ QNAG G LGSSSPS TPG+AS KR+ Q+PP+RPP VPM N +SPL+ MELT+AARRKKQKLPEKQLQ+RVAAILPESALYTQLLEFEARVDAAL RKKVDIQEALKNPPC+QKTLRIYVFNTFANQIKTIP+KPNAEPPTWTLKIIGRILEDGVDPDQPG VQ++NPLYPKFSSFFKRVTISLDQ+LYPDNHII+WE++RSP P+EGFEVKRKGDKEFTVNIRLEMNYVPEKFKLS LMEVLGIEVDTRPRIIAAIWHYVKARKLQ+P DPS F CD LQKVFGE+++KFTMVSQKISQHLSPP PIHLEHKIKLSGNSP G ACYDVLVDVPFPIQRELS LLAN +K+KEID CDEAIC+ IRKIH+H RRRAFFLGFSQSPVEFIN L++SQS+DLK+VAGE SRSAEKERRSDFFNQ WVEDAVIRYLNRKP AGSDAPGS Sbjct: 1 MSANNNNPAKSLGQTSSPFANAGMGSPSMPMNPGFPQSQAQAQMGAGFPSQFQLSQAQALAQAHQSKMHAQVAQAQAAHAQLQAHLQAQGLSINQFQNAGIGNLGSSSPSNLTPGNASLKRMPQKPPVRPPVVPMSNMVSPLKAMELTSAARRKKQKLPEKQLQERVAAILPESALYTQLLEFEARVDAALTRKKVDIQEALKNPPCLQKTLRIYVFNTFANQIKTIPKKPNAEPPTWTLKIIGRILEDGVDPDQPGMVQKSNPLYPKFSSFFKRVTISLDQRLYPDNHIIVWENSRSPAPHEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSPPLMEVLGIEVDTRPRIIAAIWHYVKARKLQHPNDPSIFTCDPPLQKVFGEEKMKFTMVSQKISQHLSPPQPIHLEHKIKLSGNSPVGTACYDVLVDVPFPIQRELSTLLANADKNKEIDQCDEAICSAIRKIHEHRRRRAFFLGFSQSPVEFINTLIESQSKDLKLVAGEGSRSAEKERRSDFFNQPWVEDAVIRYLNRKPAAGSDAPGS 544
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy TrEMBL
Match: V4W2Z7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10014820mg PE=4 SV=1) HSP 1 Score: 802.742 bits (2072), Expect = 0.000e+0 Identity = 434/544 (79.78%), Postives = 473/544 (86.95%), Query Frame = -2 Query: 556 MSMNGNNPPKNLGASSSPFGNAGMVPPPMPGNPAF----SQAQLSAGF-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGLSLNQAQNAGFGTLXXXXXXXXXXXXXXAKRILQXXXXXXXXXXXMNTMSPLRTMELTAAARRKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPQKPNAEPPTWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLYPDNHIIIWEHARSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKMVAGEPSRSAEKERRSDFFNQSWVEDAVIRYLNRKPPAGSDAPGS 2160 MS N NNP K+LG +SSPF NAGM P MP NP F +QAQ+ AGF +Q Q ++ ++ AHAQLQAHLQAQGLS+NQ QNAG G LGSSSPS TPG+AS KR+ Q+PP+RPP VPM N +SPL+ MELT+AARRKKQKLPEKQLQ+RVAAILPESALYTQLLEFEARVDAAL RKKVDIQEALKNPPC+QKTLRIYVFNTFANQIKTIP+KPNAEPP WTLKIIGRILEDGVDPDQPG VQ++NPLYPKFSSFFKRVTISLDQ+LYPDNHII+WE++RSP P+EGFEVKRKGDKEFTVNIRLEMNYVPEKFKLS LMEVLGIEVDTRPRIIAAIWHYVKARKLQ+P DPS F CD LQKVFGE+++KFTMVSQKISQHLSPP PIHLEHKIKLSGNSP G ACYDVLVDVPFPIQRELS LLAN +K+KEID CDEAIC+ IRKIH+H RRRAFFLGFSQSPVEFIN L++SQS+DLK+VAGE SRSAEKERRSDFFNQ WVEDAVIRYLNRKP AGSDAPGS Sbjct: 1 MSANNNNPAKSLGQTSSPFANAGMGSPSMPMNPGFPQSQAQAQMGAGFPSQFQLSQAQALAQAHQSKMHAQVAQAQAAHAQLQAHLQAQGLSINQFQNAGIGNLGSSSPSNLTPGNASLKRMPQKPPVRPPVVPMSNMVSPLKAMELTSAARRKKQKLPEKQLQERVAAILPESALYTQLLEFEARVDAALTRKKVDIQEALKNPPCLQKTLRIYVFNTFANQIKTIPKKPNAEPPMWTLKIIGRILEDGVDPDQPGMVQKSNPLYPKFSSFFKRVTISLDQRLYPDNHIIVWENSRSPAPHEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSPPLMEVLGIEVDTRPRIIAAIWHYVKARKLQHPNDPSIFTCDPPLQKVFGEEKMKFTMVSQKISQHLSPPQPIHLEHKIKLSGNSPVGTACYDVLVDVPFPIQRELSTLLANADKNKEIDQCDEAICSAIRKIHEHRRRRAFFLGFSQSPVEFINTLIESQSKDLKLVAGEGSRSAEKERRSDFFNQPWVEDAVIRYLNRKPAAGSDAPGS 544
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy TrEMBL
Match: M5WSF0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003829mg PE=4 SV=1) HSP 1 Score: 801.201 bits (2068), Expect = 0.000e+0 Identity = 441/545 (80.92%), Postives = 479/545 (87.89%), Query Frame = -2 Query: 553 MSMNGNNPPKNLGASSSPFGNAGMVPPPMPGNPAF----SQAQLSAGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQG-----LSLNQAQNAGFGTLXXXXXXXXXXXXXXAKRILQXXXXXXXXXXXMNTMSPLRTMELTAAARRKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPQKPNAEPPTWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLYPDNHIIIWEHARSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKMVAGEPSRSAEKERRSDFFNQSWVEDAVIRYLNRKPPAGSDAPGSI 2160 MS+N NNP KNLGASSSPFGNAGMV MP NP F +QAQ+ AGFQAQ+QLSQAQA+A AQSKAQA AQA AQ LSLNQ Q AG G LGSSSPS STPG+AS KR Q+PP+RPP V N MSP+RTMELT AAR+KKQKLP+KQLQD+VA ILPESALYTQLLEFEARVDAALARKKVDIQEALK+PPC+QKTLRIYVFNTFANQI+TIP+KPNAEPPTWTLKI+GRILEDGVDPDQPG VQ++NP YPKFSSFFKRVTISLDQ+LYP+NHII+WE+ARSP P+EGFEVKRKGDKEFTVNIRLEMNY PEKFKLS LMEVLGIEV+TRPRIIA+IWHYVKARKLQN DPSFFNCD LQKVFGE+++KFTMVSQKISQHL PP PIHLEHKIKLSGNSPAG ACYDVLVDVPFPIQRELSALLAN EK+KEID CDEAICA IRKIH+H RRRAFFLGFSQSPVEFIN L++SQ++DLK+VAG SRSAEKERRSDFF+Q WVEDAVIRYLNRKP AGSDAPGS+ Sbjct: 1 MSLNNNNPSKNLGASSSPFGNAGMVAQSMPTNPTFPQSQAQAQIGAGFQAQFQLSQAQAIAHAQSKAQAHAQAQAQQAHAQFQAQLQAQALSLNQNQAAGIGNLGSSSPSFSTPGNASLKRFPQKPPVRPPSVSPTNMMSPMRTMELTPAARKKKQKLPDKQLQDKVATILPESALYTQLLEFEARVDAALARKKVDIQEALKSPPCIQKTLRIYVFNTFANQIRTIPKKPNAEPPTWTLKIVGRILEDGVDPDQPGVVQKSNPFYPKFSSFFKRVTISLDQRLYPENHIIMWENARSPAPHEGFEVKRKGDKEFTVNIRLEMNYAPEKFKLSQPLMEVLGIEVETRPRIIASIWHYVKARKLQNQNDPSFFNCDPPLQKVFGEEKMKFTMVSQKISQHLFPPQPIHLEHKIKLSGNSPAGTACYDVLVDVPFPIQRELSALLANSEKNKEIDTCDEAICAAIRKIHEHRRRRAFFLGFSQSPVEFINTLIESQNKDLKLVAGVASRSAEKERRSDFFHQPWVEDAVIRYLNRKPVAGSDAPGSM 545
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy TrEMBL
Match: F6H3Y6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0068g02140 PE=4 SV=1) HSP 1 Score: 799.66 bits (2064), Expect = 0.000e+0 Identity = 417/547 (76.23%), Postives = 456/547 (83.36%), Query Frame = -2 Query: 556 MSMNGNNPPKNLGASSSPFGNAGMVPPPMPGNPAFSQAQLSAGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ------------GLSLNQAQNAGFGTLXXXXXXXXXXXXXXAKRILQXXXXXXXXXXXMNTMSPLRTMELTAAARRKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPQKPNAEPPTWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLYPDNHIIIWEHARSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKMVAGEPSRSAEKERRSDFFNQSWVEDAVIRYLNRKPPAGSDAPGS 2160 M++N NNPPKNLGASSSPFGNAGM P MP NP FSQ Q +Q + A G++LNQ+Q G G +G SSPS+ PG+++ KR LQ+PP+RPPG NT+SPL+ MELT AARRKKQKLPEKQLQDRVAAILPESALYTQLLEFE+RVDAALARKK+DIQEALKNPPCVQKTLRIY+FNTFANQI+TIP+KPNAEPPTWTLKIIGRILE+GVDPDQ + ++N YPKFSSFFKRVTISLDQ+LYPDN IIIWE+ARSP P+EGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNP DPSFFNCD LQKVFGED++KFTMVSQKISQHLSPP PIHLEHKIKLSGN PAGNACYDVLVDVPFPIQ+ELSALLAN EK+KEIDACDEAIC+ IRKIH+H RRRAFFLGFSQSPVEFIN L++SQS+DLK+VAGE SR+AEKERRSDFFNQ WVEDAVIRYLNRKP AGSDAPGS Sbjct: 1 MAVNNNNPPKNLGASSSPFGNAGMGSPAMPANPVFSQPQAQGQIGGGFQGQFQLSQAHQAHVIAQAHSKAQAHAQAQAQAAHAQFQAQLQAQGMTLNQSQGIGIGNMGGSSPSIGAPGNSNMKRTLQKPPVRPPGPLGANTISPLKVMELTPAARRKKQKLPEKQLQDRVAAILPESALYTQLLEFESRVDAALARKKIDIQEALKNPPCVQKTLRIYIFNTFANQIRTIPKKPNAEPPTWTLKIIGRILEEGVDPDQAAMLHKSNVSYPKFSSFFKRVTISLDQRLYPDNPIIIWENARSPAPHEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPNDPSFFNCDPPLQKVFGEDKMKFTMVSQKISQHLSPPQPIHLEHKIKLSGNCPAGNACYDVLVDVPFPIQKELSALLANTEKNKEIDACDEAICSAIRKIHEHRRRRAFFLGFSQSPVEFINTLIESQSKDLKLVAGEASRNAEKERRSDFFNQPWVEDAVIRYLNRKPVAGSDAPGS 547
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy TrEMBL
Match: A5AZ58_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041986 PE=4 SV=1) HSP 1 Score: 796.964 bits (2057), Expect = 0.000e+0 Identity = 416/547 (76.05%), Postives = 455/547 (83.18%), Query Frame = -2 Query: 556 MSMNGNNPPKNLGASSSPFGNAGMVPPPMPGNPAFSQAQLSAGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ------------GLSLNQAQNAGFGTLXXXXXXXXXXXXXXAKRILQXXXXXXXXXXXMNTMSPLRTMELTAAARRKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPQKPNAEPPTWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLYPDNHIIIWEHARSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKMVAGEPSRSAEKERRSDFFNQSWVEDAVIRYLNRKPPAGSDAPGS 2160 M++N NNPPKNLGASSSPFGNAGM P MP NP FSQ Q +Q + A G++LNQ+Q G G +G SSPS+ PG+++ KR LQ+PP+RPPG NT+SPL+ MELT AARRKKQKLPEKQLQDRVAAILPESALYTQLLEFE+RVDAALARKK+DIQEALKNPPCVQKTLRIY+FNTF NQI+TIP+KPNAEPPTWTLKIIGRILE+GVDPDQ + ++N YPKFSSFFKRVTISLDQ+LYPDN IIIWE+ARSP P+EGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNP DPSFFNCD LQKVFGED++KFTMVSQKISQHLSPP PIHLEHKIKLSGN PAGNACYDVLVDVPFPIQ+ELSALLAN EK+KEIDACDEAIC+ IRKIH+H RRRAFFLGFSQSPVEFIN L++SQS+DLK+VAGE SR+AEKERRSDFFNQ WVEDAVIRYLNRKP AGSDAPGS Sbjct: 1 MAVNNNNPPKNLGASSSPFGNAGMGSPAMPANPVFSQPQAQGQIGGGFQGQFQLSQAHQAHVIAQAHSKAQAHAQAQAQAAHAQFQAQLQAQGMTLNQSQGIGIGNMGGSSPSIGAPGNSNMKRXLQKPPVRPPGPLGANTISPLKVMELTPAARRKKQKLPEKQLQDRVAAILPESALYTQLLEFESRVDAALARKKIDIQEALKNPPCVQKTLRIYIFNTFXNQIRTIPKKPNAEPPTWTLKIIGRILEEGVDPDQAAMLHKSNVSYPKFSSFFKRVTISLDQRLYPDNPIIIWENARSPAPHEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPNDPSFFNCDPPLQKVFGEDKMKFTMVSQKISQHLSPPQPIHLEHKIKLSGNCPAGNACYDVLVDVPFPIQKELSALLANTEKNKEIDACDEAICSAIRKIHEHRRRRAFFLGFSQSPVEFINTLIESQSKDLKLVAGEASRNAEKERRSDFFNQPWVEDAVIRYLNRKPVAGSDAPGS 547
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy Swiss-Prot
Match: SMRD2_BOVIN (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 OS=Bos taurus GN=SMARCD2 PE=3 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 6.612e-68 Identity = 137/404 (33.91%), Postives = 224/404 (55.45%), Query Frame = -2 Query: 595 AARR--KKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQIKTIPQKPNAEP----------------PTWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISLDQKLY-PDNHIIIWEHARSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKMVA---GEPSRSAEKERRSDFFNQSWVEDAVIRYL 1740 A RR K++K+ +K L R+ ++PES Y LL FE ++D +ARK+++IQEA+K P ++ LRIY+ NTF+ P K + +W L++ G++L+D P +R KFSSFFK + I LD++LY PDNH++ W + +GF+VKR GD + L +++ P ++KL L +LG+ TR I+ A+W Y+K +LQ+ ++ + NC+ +++F R++F+ + K++ L P PI + H I + N ACYD+ V+V P++ ++S LA+ +EI + D I TI I+ +R F L FS P +FI ++SQ +DLK++ G P E+ERR+ F++Q W ++AV R++ Sbjct: 130 AQRRGLKRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPLTQKRKLRIYISNTFS------PSKAEGDTAGTTGTPGGTPAGDKVASWELRVEGKLLDD------PSKQKR------KFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFRQIFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQMSNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTDPQDFIQEWLRSQRRDLKIITDVIGNP----EEERRAAFYHQPWAQEAVGRHI 511
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy Swiss-Prot
Match: SNF12_DICDI (SWI/SNF complex component SNF12 homolog OS=Dictyostelium discoideum GN=snf12-1 PE=3 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 1.474e-58 Identity = 116/381 (30.45%), Postives = 210/381 (55.12%), Query Frame = -2 Query: 586 DRVAAILPESALYTQLLEFEARVDAALARKKVDIQEA-LKNPPCVQKTLRIYVFNTFANQ-----IKTIPQKPNAEPPTWTLKIIGRILEDGVDPDQPGFVQRTNPLYP-----KFSSFFKRVTISLDQKLYPDNHIIIWEHARSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKMVAGEPSRSAEKERRSDFFNQSWVEDAVIRYLNRK 1695 + + + PE L++QLLEFE ++DA++ ++ +DIQEA +N +TLR+ ++NT++NQ + E P+W+L++ G++L++ D ++ ++ KFSSFFK+V I + + W+ +++ T +GFE+KR G++E + I + +++VP+K+K+ L ++L I DT+PRII A+WHY+K+ L + + CD L+ +F + ++F + Q + +HLSPP P+ ++ + LSG++ YD+ V+V PI N KEI ++ I I+K++ H R+R F S P+ F+N + +D ++ S E+ER + F+ Q E+ V YL+++ Sbjct: 68 EELISFAPECLLFSQLLEFEEKLDASINKRLIDIQEASRRNSIKNIRTLRLSIYNTYSNQSAYYHLDNKSLNSVQERPSWSLRVEGKLLDESQDELVNKSIKSSSSSSSTANKRKFSSFFKKVFIQIGHR-----DTCEWDKSQTFTETDGFEIKRNGNQEVDIKILMYLDHVPQKYKVLGGLSQLLNIHTDTKPRIILALWHYIKSNTLLDA-ETKKITCDENLKNIFSLEELQFNQIPQLLREHLSPPDPLEFQYTLHLSGDAKDYEQAYDIQVEVDEPI------FNPNPTMRKEISQLNDEINHHIQKVYQHKRKREFMEKLSSDPLGFLNDTTANLVKDFQVSKSTTSTGFEEERHASFYYQPMTEELVKNYLSKQ 436
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy Swiss-Prot
Match: SSR3_SCHPO (SWI/SNF and RSC complexes subunit ssr3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ssr3 PE=1 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 1.782e-55 Identity = 121/396 (30.56%), Postives = 208/396 (52.53%), Query Frame = -2 Query: 592 AARRKKQKLPEKQLQDRVAAILPESALYTQLLEFEARVDAALARKKVDIQEALKNPPCVQKTLRIYVFNTFANQI---KTIPQKPNAEP------PTWTLKIIGRILEDGVDPDQPGFVQRTNPLYPKFSSFFKRVTISL--DQKLYPDNHIIIWEHA--RSPTPNEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVKFTMVSQKISQHLSPPPPIHLEHKIKLSGNSPAGNACYDVLVDVPFPIQRELSALLANGEKSKEIDACDEAICATIRKIHDHCRRRAFFLGFSQSPVEFINALVQSQSQDLKMVAGEPSRSAEKERRSDFFNQSWVEDAVIRYLN 1740 A +K ++ E+++ D + +PE+ Y L + E ++D+ + RK+ D+Q++L + LR+Y+ +T ANQ K Q+ N+ P WTL I GR+L + D D F L P F++FF+++ I + LYP + + W S T N G V RKGD+ V I L PE++KLS A +LGI TRP I++ +W Y+K +LQ+ + NCD L+ +F DR+ F + + +++ L P PI + + I +S ++ +D+ ++ P ++ + LA +I + D+ + I+ I + F FS+SP+EFIN ++SQS+DL++V + + ++R +D++ Q WV ++ YLN Sbjct: 20 AELKKSMRIIEREIPDSLLEKIPEAEDYIALQDLERKLDSLIVRKRFDLQDSLSRNSHKTRILRMYIHSTVANQSWQQKGENQENNSGDINSLPIPEWTLHIEGRLLVNPDDEDDKAF-----ELAP-FTNFFRKIAIQILRSDDLYPSGNYVEWNKLPDNSNTSN-GITVTRKGDQSVDVKIMLYPEEHPERYKLSKAFANILGIREGTRPDIVSYLWQYIKFHRLQDMEEKRLINCDKALRDLFEADRLYFPRIPELMNRFLEPIDPIVIPYTINVSEHTVEKVTIFDIRINTEDPRHSQIRSFLATMMSQDKIRSIDDKLTELIQAITYSQSKYDFMKKFSESPIEFINEWIESQSRDLEIVLDGTNMNYAEKRSADYYQQPWVHESAFHYLN 408
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy Swiss-Prot
Match: UAF30_SCHPO (Upstream activation factor subunit spp27 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=spp27 PE=1 SV=1) HSP 1 Score: 55.4546 bits (132), Expect = 4.411e-7 Identity = 27/63 (42.86%), Postives = 37/63 (58.73%), Query Frame = -2 Query: 1015 FKLSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPYDPSFFNCDAQLQKVFGEDRVK-FTM 1200 KLS L E LG+E +RP+ + +W Y+KA LQ+P D CD +L+ VF D + FTM Sbjct: 121 MKLSPKLAEFLGLEQLSRPQTVKKLWEYIKAHDLQDPNDKRTILCDDKLKSVFEVDTLHMFTM 183 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0021561 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 14
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0021561 ID=g.arboreum_cottongen_reftransV1_0021561; Name=g.arboreum_cottongen_reftransV1_0021561; organism=Gossypium arboreum; type=contig; length=2287bpback to top |