g.arboreum_cottongen_reftransV1_0000709, g.arboreum_cottongen_reftransV1_0000709 (contig) Gossypium arboreum

Overview


Name	g.arboreum_cottongen_reftransV1_0000709
Unique Name	g.arboreum_cottongen_reftransV1_0000709
Type	contig
Organism	Gossypium arboreum (Tree cotton)
Sequence length	762

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Chr7	chromosome	g.arboreum_cottongen_reftransV1_0000709:1..762 . Chr7:91238587..91239348 +

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium arboreum CottonGen RefTrans V1	2016-11-14
InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1	2016-11-14
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL	2016-11-15
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt	2016-11-15

Homology

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0000709 vs. ExPASy TrEMBL
Match: A0A067JAX3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21432 PE=4 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 7.112e-47
Identity = 79/143 (55.24%), Postives = 107/143 (74.83%), Query Frame = -1

Query:  334 GYCQKGLVEKAKAKLQDIIKRRKIAIPNSWSIVATGYMNKNKMEKAFECFKEALAIQTQNRGWKPKAGLISSILSWLGENGEVEDAEAFVKLLRTKVPVNREMYHALLKAYIRNGKEVEGLLVSMKDDKIDENEDTMKILSLQ 762
             Y QKGL EKA+A L+++I++ K   PNSW+I+A GY+ K  M KAFEC K AL+++ +N+GWKP   ++  ILSWLG+ G  ED EAFV  L T +P+NR++YHALLK +IR+GK++ GLL  MK DKIDE+E+T KIL L+
Sbjct:  264 AYSQKGLYEKAEALLEELIEKGKATTPNSWAIIAAGYLEKGNMAKAFECMKAALSLRVENKGWKPNPRVVKQILSWLGDEGCTEDVEAFVDSLSTAIPMNRQIYHALLKVHIRSGKDIFGLLDRMKTDKIDEDEETKKILGLR 406

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0000709 vs. ExPASy TrEMBL
Match: A0A067G664_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g011236mg PE=4 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 4.487e-45
Identity = 80/133 (60.15%), Postives = 103/133 (77.44%), Query Frame = -1

Query:  364 GYCQKGLVEKAKAKLQDIIKRRKIAIPNSWSIVATGYMNKNKMEKAFECFKEALAIQTQNRGWKPKAGLISSILSWLGENGEVEDAEAFVKLLRTKVPVNREMYHALLKAYIRNGKEVEGLLVSMKDDKIDEN 762
            GY QKG++EKA A L++I+K+ K   PNSWSI+A GY +KN MEKAFEC KEALA+  +N+ W+PK  L+SSIL WLG+N +VE+ EAFV  L+ KV   R MYHAL +A+IR+G+EV+GLL SMK D IDE+
Sbjct:  358 GYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQ-KRNMYHALTEAHIRSGQEVDGLLESMKADDIDED 489

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0000709 vs. ExPASy TrEMBL
Match: V4TPW7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015002mg PE=4 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 2.817e-44
Identity = 76/140 (54.29%), Postives = 104/140 (74.29%), Query Frame = -1

Query:  343 GYCQKGLVEKAKAKLQDIIKRRKIAIPNSWSIVATGYMNKNKMEKAFECFKEALAIQTQNRGWKPKAGLISSILSWLGENGEVEDAEAFVKLLRTKVPVNREMYHALLKAYIRNGKEVEGLLVSMKDDKIDENEDTMKIL 762
            GYC  GLV+KA+A L+D++++ K   PNSW++VA GY +  K E+ F+C K AL++  + +GWKP   +I+SILS LG+ G V+D EAFV  LRT +P+NR+MYHA +KA IRNGK V+ LL SMK D IDE+E+T +IL
Sbjct:  351 GYCNNGLVQKAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0000709 vs. ExPASy TrEMBL
Match: F6HRW8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0597g00040 PE=4 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 5.002e-44
Identity = 79/140 (56.43%), Postives = 105/140 (75.00%), Query Frame = -1

Query:  343 GYCQKGLVEKAKAKLQDIIKRRKIAIPNSWSIVATGYMNKNKMEKAFECFKEALAIQTQNRGWKPKAGLISSILSWLGENGEVEDAEAFVKLLRTKVPVNREMYHALLKAYIRNGKEVEGLLVSMKDDKIDENEDTMKIL 762
            GY +KGL EKA+A L++++++ KI  PNSW  VA+GYM++ +MEKA EC K A+++   N+G KP + +I+ ILSWLG+ G VED EAFV  LR  +P+NR MYH L+ A IR GKEV+GLL SMK DKI E+E+T KIL
Sbjct:  360 GYSEKGLFEKAEAMLKELMEKGKITTPNSWGTVASGYMDEGEMEKAVECMKAAISLHVNNKGRKPNSRVIAGILSWLGDKGRVEDVEAFVGSLRIVIPMNRRMYHTLIMANIRAGKEVDGLLASMKADKIVEDEETKKIL 499

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0000709 vs. ExPASy TrEMBL
Match: B9H2W0_POPTR (Pentatricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POPTR_0004s04250g PE=4 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 1.171e-43
Identity = 79/142 (55.63%), Postives = 104/142 (73.24%), Query Frame = -1

Query:  337 GYCQKGLVEKAKAKLQDIIKRRKIAIPNSWSIVATGYMNKNKMEKAFECFKEALAIQTQNRGWKPKAGLISSILSWLGENGEVEDAEAFVKLLRTKVPVNREMYHALLKAYIRNGKEVEGLLVSMKDDKIDENEDTMKILSL 762
            GY +KGL EKAKA L+++ ++ K+ +PNSW IVA G+ +K+++ KAF C K AL +  +N+GWKP   +I+ ILSWLG+ G  EDAEAFV  L+T +PVNREMYHA+LKA IR GKEV  LL  MK   I E+E+T KIL +
Sbjct:  350 GYSRKGLCEKAKALLENLTEKGKMTLPNSWGIVAAGFFDKSEVAKAFSCMKAALCLYVENKGWKPNQRVINGILSWLGDEGSAEDAEAFVSSLKTVIPVNREMYHAVLKANIRAGKEVHRLLDGMKTYNIKEDEETKKILRM 491

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0000709 vs. ExPASy TrEMBL
Match: A0A067GBC3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g010994mg PE=4 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 1.284e-43
Identity = 75/140 (53.57%), Postives = 103/140 (73.57%), Query Frame = -1

Query:  343 GYCQKGLVEKAKAKLQDIIKRRKIAIPNSWSIVATGYMNKNKMEKAFECFKEALAIQTQNRGWKPKAGLISSILSWLGENGEVEDAEAFVKLLRTKVPVNREMYHALLKAYIRNGKEVEGLLVSMKDDKIDENEDTMKIL 762
            GYC  GLV+ A+A L+D++++ K   PNSW++VA GY +  K E+ F+C K AL++  + +GWKP   +I+SILS LG+ G V+D EAFV  LRT +P+NR+MYHA +KA IRNGK V+ LL SMK D IDE+E+T +IL
Sbjct:  351 GYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 490

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0000709 vs. ExPASy TrEMBL
Match: A5C3G3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006333 PE=4 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 2.047e-43
Identity = 78/140 (55.71%), Postives = 105/140 (75.00%), Query Frame = -1

Query:  343 GYCQKGLVEKAKAKLQDIIKRRKIAIPNSWSIVATGYMNKNKMEKAFECFKEALAIQTQNRGWKPKAGLISSILSWLGENGEVEDAEAFVKLLRTKVPVNREMYHALLKAYIRNGKEVEGLLVSMKDDKIDENEDTMKIL 762
            GY +KGL EKA+A L++++++ KI  P+SW  VA+GYM++ +MEKA EC K A+++   N+G KP + +I+ ILSWLG+ G VED EAFV  LR  +P+NR MYH L+ A IR GKEV+GLL SMK DKI E+E+T KIL
Sbjct:  360 GYSEKGLFEKAEAMLKELMEKGKITTPDSWGTVASGYMDEGEMEKAVECMKAAISLHVNNKGRKPNSRVIAGILSWLGDKGRVEDVEAFVGSLRIVIPMNRRMYHTLIMANIRAGKEVDGLLASMKADKIVEDEETKKIL 499

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0000709 vs. ExPASy TrEMBL
Match: V4TX32_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10007647mg PE=4 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.004e-43
Identity = 79/131 (60.31%), Postives = 100/131 (76.34%), Query Frame = -1

Query:  370 GYCQKGLVEKAKAKLQDIIKRRKIAIPNSWSIVATGYMNKNKMEKAFECFKEALAIQTQNRGWKPKAGLISSILSWLGENGEVEDAEAFVKLLRTKVPVNREMYHALLKAYIRNGKEVEGLLVSMKDDKID 762
            GY QKG++EKA A L++I+K+ K   PNSWSI+A GY +KN MEKAFEC KEALA+  +N+ W+PK  L+SSIL WLG+N +VE+ EAFV  L+ KV   R MYHAL +A+IR+G+EV GLL SMK D ID
Sbjct:  358 GYSQKGMIEKADAVLKEIVKKGKTPTPNSWSIIAAGYADKNNMEKAFECMKEALAVHEENKFWRPKPSLVSSILDWLGDNRDVEEVEAFVSSLKIKVQ-KRNMYHALTEAHIRSGQEVYGLLESMKADDID 487

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0000709 vs. ExPASy TrEMBL
Match: U5FV78_POPTR (Pentatricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POPTR_0011s05120g PE=4 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 1.505e-42
Identity = 78/142 (54.93%), Postives = 102/142 (71.83%), Query Frame = -1

Query:  337 GYCQKGLVEKAKAKLQDIIKRRKIAIPNSWSIVATGYMNKNKMEKAFECFKEALAIQTQNRGWKPKAGLISSILSWLGENGEVEDAEAFVKLLRTKVPVNREMYHALLKAYIRNGKEVEGLLVSMKDDKIDENEDTMKILSL 762
            GY  KGL EKAKA L+++ ++ K  +PN W  VA G+ +KN++ KAF C K AL +  +N+ WKP   +I+ ILSWLG+ G  EDAEAFV  L+  +P+NREMYHA+LKA+IR GKEV GLL  MK  KI E+E+T KILS+
Sbjct:  350 GYSGKGLYEKAKALLENLTEKGKATLPNIWGKVAAGFFDKNEVAKAFSCMKAALCLYEENKEWKPNQKVITGILSWLGDEGSAEDAEAFVSSLKNVIPMNREMYHAVLKAHIRAGKEVHGLLDGMKTCKIKEDEETKKILSM 491

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0000709 vs. ExPASy TrEMBL
Match: A0A068UCA1_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_19 OS=Coffea canephora GN=GSCOC_T00021224001 PE=4 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.506e-42
Identity = 76/133 (57.14%), Postives = 99/133 (74.44%), Query Frame = -1

Query:  364 GYCQKGLVEKAKAKLQDIIKRRKIAIPNSWSIVATGYMNKNKMEKAFECFKEALAIQTQNRGWKPKAGLISSILSWLGENGEVEDAEAFVKLLRTKVPVNREMYHALLKAYIRNGKEVEGLLVSMKDDKIDEN 762
            GYCQK L EKA+  L+ I+K+ K+  PNSW I+A GYMNK  MEKAFEC KEALA+Q QN  W PK  L+ +IL+WLG  GE+E+ +A V+ LRT VP NR +YHAL+KA IR+ K+V+ +L SMK D ++E+
Sbjct:  356 GYCQKDLTEKAEDMLRQIVKKGKVPTPNSWGIIAGGYMNKGNMEKAFECMKEALAVQEQNPKWDPKPRLVFNILNWLGNRGELEEVQALVRSLRTVVPANRNLYHALIKANIRDRKDVDWVLESMKADGVEED 488

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0000709 vs. ExPASy Swiss-Prot
Match: PP334_ARATH (Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidopsis thaliana GN=At4g21705 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 7.812e-36
Identity = 66/144 (45.83%), Postives = 98/144 (68.06%), Query Frame = -1

Query:  334 GYCQKGLVEKAKAKLQDIIKRRKIAIPNSWSIVATGYMNKNKMEKAFECFKEALAIQTQNRGWKPKAGLISSILSWLGENGEVEDAEAFVKLLRTKVPVNREMYHALLKAYIR-NGKEVEGLLVSMKDDKIDENEDTMKILSLQ 762
            GY  K + EKA+A L+D+ +R K   P SW +VAT Y  K  +E AF+C K AL ++  +R W+P   L++S+LSW+G+ G +++ E+FV  LR  + VN++MYHAL+KA IR  G+ ++ LL  MKDDKI+ +E+T  ILS +
Sbjct:  346 GYIGKSMEEKAEAMLEDLARRGKATTPESWELVATAYAEKGTLENAFKCMKTALGVEVGSRKWRPGLTLVTSVLSWVGDEGSLKEVESFVASLRNCIGVNKQMYHALVKADIREGGRNIDTLLQRMKDDKIEIDEETTVILSTR 489

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0000709 vs. ExPASy Swiss-Prot
Match: PPR86_ARATH (Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana GN=At1g60770 PE=2 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 2.025e-8
Identity = 38/150 (25.33%), Postives = 73/150 (48.67%), Query Frame = -1

Query:  319 GYCQKGLVEKAKAKLQDIIKRRKIAIPNSWSIVATGYMNKNKMEKAFECFKEALAIQTQNRG-WKPKAGLISSILSWLGENGEVEDAEAFVKLLRTKVP-VNREMYHALLKAYIRNGKEVEGLLVSMKDDKIDENEDTMKILSLQDQNSQ 762
             Y Q+GL++KA    +   +R       +W I    Y+    M +A EC  +A++I   + G W P    + +++S+  +  +V  AE  +++L+     +  E++  L++ Y   GK    +   +K + ++ NE T K+L   D+ SQ
Sbjct:  343 AYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFMDYYVKSGDMARALECMSKAVSIGKGDGGKWLPSPETVRALMSYFEQKKDVNGAENLLEILKNGTDNIGAEIFEPLIRTYAAAGKSHPAMRRRLKMENVEVNEATKKLL---DEVSQ 489

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0000709 vs. ExPASy Swiss-Prot
Match: PP166_ARATH (Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidopsis thaliana GN=At2g20710 PE=2 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 6.316e-8
Identity = 31/106 (29.25%), Postives = 60/106 (56.60%), Query Frame = -1

Query:  451 GYCQKGLVEKAKAKLQDIIKRRKIAIPNSWSIVATGYMNKNKMEKAFECFKEALAIQTQNRGWKPKAGLISSILSWLGENGEVEDAEAFVKLL--RTKVPVNREMY 762
            GYC+KG++EKA+  +  ++++ ++   ++W  +A GY    KMEKA E +K   AI+    GW+P   ++ S + +L    ++E     ++LL  R  +  ++ +Y
Sbjct:  359 GYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYKMAGKMEKAVEKWKR--AIEVSKPGWRPHQVVLMSCVDYLEGQRDMEGLRKILRLLSERGHISYDQLLY 462

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0000709 vs. ExPASy Swiss-Prot
Match: PP302_ARATH (Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidopsis thaliana GN=At4g02820 PE=2 SV=1)

HSP 1 Score: 55.4546 bits (132), Expect = 1.553e-7
Identity = 32/118 (27.12%), Postives = 60/118 (50.85%), Query Frame = -1

Query:  328 NSWSIVATGYMNKNKMEKAFECFKEALAIQTQNRGWKPKAGLISSILSWLGENGEVEDAEAFVKLLRTKVPVNREMYHALLKAYIRNGKEVEGLLVSMKDDKIDENEDTMKILSLQDQ 681
            ++W I+   Y+ +  MEK  +CF +A+      + W     L+      L E G V+ AE  + LL+    VN ++Y++LL+ Y + G+    +   M  D ++ +E+T +++ L  Q
Sbjct:  407 STWEILTWAYLKRKDMEKVLDCFGKAI---DSVKKWTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAGYVNTQLYNSLLRTYAKAGEMALIVEERMAKDNVELDEETKELIRLTSQ 521

The following BLAST results are available for this feature:

BLAST of g.arboreum_cottongen_reftransV1_0000709 vs. ExPASy TrEMBL
BLAST of g.arboreum_cottongen_reftransV1_0000709 vs. ExPASy Swiss-Prot

BLAST of g.arboreum_cottongen_reftransV1_0000709 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
A0A067JAX3_JATCU	7.112e-47	55.24	Uncharacterized protein OS=Jatropha curcas GN=JCGZ...	[more]
A0A067G664_CITSI	4.487e-45	60.15	Uncharacterized protein OS=Citrus sinensis GN=CISI...	[more]
V4TPW7_9ROSI	2.817e-44	54.29	Uncharacterized protein OS=Citrus clementina GN=CI...	[more]
F6HRW8_VITVI	5.002e-44	56.43	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B9H2W0_POPTR	1.171e-43	55.63	Pentatricopeptide repeat-containing family protein...	[more]
A0A067GBC3_CITSI	1.284e-43	53.57	Uncharacterized protein OS=Citrus sinensis GN=CISI...	[more]
A5C3G3_VITVI	2.047e-43	55.71	Putative uncharacterized protein OS=Vitis vinifera...	[more]
V4TX32_9ROSI	3.004e-43	60.31	Uncharacterized protein OS=Citrus clementina GN=CI...	[more]
U5FV78_POPTR	1.505e-42	54.93	Pentatricopeptide repeat-containing family protein...	[more]
A0A068UCA1_COFCA	2.506e-42	57.14	Coffea canephora DH200=94 genomic scaffold, scaffo...	[more]

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BLAST of g.arboreum_cottongen_reftransV1_0000709 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 4


Match Name	E-value	Identity	Description
PP334_ARATH	7.812e-36	45.83	Pentatricopeptide repeat-containing protein At4g21...	[more]
PPR86_ARATH	2.025e-8	25.33	Pentatricopeptide repeat-containing protein At1g60...	[more]
PP166_ARATH	6.316e-8	29.25	Pentatricopeptide repeat-containing protein At2g20...	[more]
PP302_ARATH	1.553e-7	27.12	Pentatricopeptide repeat-containing protein At4g02...	[more]

InterPro

Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain	GENE3D	1.25.40.10		coord: 2..79 e-value: 8.4E-5 score: 21.6
IPR011990	Tetratricopeptide-like helical domain	SUPERFAMILY	48452	TPR-like	coord: 2..78
None	No IPR available	PANTHER	PTHR24015:SF671	SUBFAMILY NOT NAMED	coord: 1..102
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 1..102
IPR013026	Tetratricopeptide repeat-containing domain	PROSITE	PS50293	TPR_REGION	coord: 1..23 score: 8.688

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.arboreum_cottongen_reftransV1_0000709 ID=g.arboreum_cottongen_reftransV1_0000709; Name=g.arboreum_cottongen_reftransV1_0000709; organism=Gossypium arboreum; type=contig; length=762bp
GGGCTTTATATTTTCCCAATCCAACTGGGGTTTGGATTGTGACTTCGATT
TAGATGGAGTTTCATAACATTGAATAGCCCATCTCCCATCATATAATACA
TGTGAAATGCAGTTTCCCACCCCTACCCTGTATACATGATAAATAAGCCA
AACTACTTTCCTGCTTCTAACAACATAGCGATGATGACATAAATCATCAC
ATAATTTCAAAGCATGTTCCCCAAGGACATAACAAAATAAACATGCTACA
CATTGGGGAAGGGCAACATGTAATGTAAGATTATCATCTTAAAGATTCTG
TAACCTCTACCCAGTGACTTGAGAGTTTTGGTCTTGAAGGCTAAGGATCT
TCATCGTGTCCTCGTTTTCATCTATTTTATCATCCTTCATGCTCACCAAA
AGCCCCTCTACTTCTTTTCCATTTCTGATATATGCCTTTAAAAGGGCATG
GTACATTTCTCTATTTACCGGAACCTTGGTTCTCAATAATTTCACAAAAG
CTTCTGCATCTTCAACTTCTCCATTCTCACCTAGCCAACTCAATATGCTT
GATATTAAACCTGCTTTTGGCTTCCACCCTCTATTTTGTGTCTGTATAGC
AAGAGCTTCCTTAAAACACTCAAAAGCCTTCTCCATTTTGTTCTTATTCA
TGTATCCAGTTGCGACAATAGACCAACTGTTCGGGATTGCAATCTTCCTT
CTTTTGATTATATCCTGTAACTTCGCTTTTGCCTTTTCAACTAAACCTTT
CTGACAATATCC

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf
IPR013026	TPR-contain_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Search form

g.arboreum_cottongen_reftransV1_0000709, g.arboreum_cottongen_reftransV1_0000709 (contig) Gossypium arboreum

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