g.arboreum_cottongen_reftransV1_0013233, g.arboreum_cottongen_reftransV1_0013233 (contig) Gossypium arboreum
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0013233 vs. ExPASy TrEMBL
Match: A0A059CGM7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01416 PE=4 SV=1) HSP 1 Score: 1016.53 bits (2627), Expect = 0.000e+0 Identity = 501/797 (62.86%), Postives = 621/797 (77.92%), Query Frame = -2 Query: 334 RLQFFIRMISEGNTIVVQANSEDTVKSLHERIQVMTGIPVIEQRLIYRGKQLQWEQSLADCSIQNDAGLQLVGRMRSTDHPQTWQVMDDMISVICRLCRGETPPSPTKHIKDCLTNFFTIAPKDNNDSGPAHLQIFMASSAPAALVMLYMSPIKKNKMCADDSIRHILTQYRSALPKHLHSYCAPILLEFCKLLRKVVSEDSLYEACRSALGMLLESVGTSRGLMLPE-VKGLIVIQDIFPFVSELADKISKNLESSVDSTSSGEPLSSDVRDFTAFLNPLRSTILERVAFRIPISVKWKKKDNSNPPYGEAVEFLHTIFNDLLGKMENCLIRVEENLAATGSSEGEYLSSEWSQYLAILKELNGISKLYQGAEEQFWMLLRNRKSSLCALIIRFAKRNEDNRWLLEHKDVTDFESRRHLAMMMFPEVKEDYEELHEMLIDRSQLLSESFQYIAHANPESLHAGLFMEFKNEEATGPGVLREWFFLVCQAIFNPENALFVPCSNDRRRFFPNPASRVDPSHLEYFRFAGRVIALALMHKVQVGVVFDRVFFQQLAGMHISLEDIRETDPCLYSSCKKILEMDAEFIDSDALGLTFVREVEELGSRRLVELVAGGKNIVVNSKNRQEYVNLLIRDRFVTSISEQVDHFSQGFGHILSNSRLQKFFFQSLELEDLDWMLYGSESPICIEDWKAHTEYNGYTENDPQINWFWEIVREMSAEQRKVLLFFWTSLKHLPVEGFRGLASQLYIYKXXXXXXXXXXXHTCFYRLCFPPYPSRAEMQKRLNVVTQEHVGCSFGTW 2721 RLQFF+R ++G T+V +ANS DTV+S+HERI ++T IPV+EQRLIYRGKQLQ ++SLA+CSIQNDA L LVGRMRST H + W+++DDMIS++ RLC GET P K I+ ++ + ++ PKD++D+ HLQ+FM+ S PAALVMLYMSPI+ NK A++SIRH L + LPK L S CAPI+LEFC LLR++ S+D LY +CRS+ G +++ + E VK I I++IFPFV ELADK+SK+LE S+ + +S S DV DF FL PLR+ + F+ PIS+ + + E VE L+ +F D+L KM CL R+E+ L+A S E + W QYL ILKELNGISKLY G+EE+FW +L RK +LC L++R+AKR+ D++WLLE KD+ DFESRRHL MMMFPEVK D++E HEMLIDRSQLLSESF YIA+A ESLH G+ MEFKNEEATGPGVLREWF LVCQAIFN +N LFV C NDRRRF+PNPAS V+P HL+YF F+GR+I LALMHKVQVG+V DRVFF QL G ISLEDIR+ DP +Y++CK ILE D E+IDSDALGLTFVREVEELG RR+VEL GGK +VVNSKNR +YV+LLI+ +FVTSIS+QV F+QGFG +LS+ RLQKFFFQSLELED+D ML+GS + I +EDWKAHTEYNGY ND QI+WFW+IVR+MS +Q+K +LFFWTS+K+LPVEGFRGLAS+LYIYKS E HLPSSHTCFYRLCFPPYPS M++RL+++ QEHVGCSFGT+ Sbjct: 6 RLQFFVR--TDGKTLVFRANSSDTVRSVHERIHLITKIPVVEQRLIYRGKQLQCDKSLAECSIQNDACLHLVGRMRSTGHSKAWRIIDDMISLVRRLCEGETVPYALKTIRTKISEYLSMTPKDDDDAATGHLQLFMSFSVPAALVMLYMSPIRDNKEHAEESIRHFLESCITELPKSLRSRCAPIVLEFCNLLRRIASDDPLYLSCRSSFGSMMKVIKVRWVSKHTESVKRAISIKEIFPFVKELADKLSKDLELSLHTIASLGTWS-DVHDFKMFLRPLRTVMSGYKGFKHPISLPMENEHRHVLLCKEEVELLYQVFEDVLKKMGECLFRMEQWLSANVSGEIDIACPAWPQYLTILKELNGISKLYLGSEEEFWTILSMRKRALCMLVVRYAKRSADHKWLLERKDIMDFESRRHLVMMMFPEVKRDFQEQHEMLIDRSQLLSESFDYIANAKAESLHGGILMEFKNEEATGPGVLREWFVLVCQAIFNQQNPLFVACPNDRRRFYPNPASTVEPLHLKYFNFSGRMIGLALMHKVQVGIVLDRVFFLQLGGYSISLEDIRDADPDMYNNCKWILERDPEYIDSDALGLTFVREVEELGLRRVVELCDGGKGMVVNSKNRNDYVDLLIKHKFVTSISQQVSRFAQGFGDMLSDLRLQKFFFQSLELEDIDQMLHGSGNDISVEDWKAHTEYNGYKSNDSQIDWFWKIVRKMSPQQKKNILFFWTSVKYLPVEGFRGLASRLYIYKSMEDISHLPSSHTCFYRLCFPPYPSMTIMEQRLSIIAQEHVGCSFGTY 799
BLAST of g.arboreum_cottongen_reftransV1_0013233 vs. ExPASy TrEMBL
Match: W9QUP9_9ROSA (E3 ubiquitin-protein ligase UPL5 OS=Morus notabilis GN=L484_013654 PE=4 SV=1) HSP 1 Score: 1011.52 bits (2614), Expect = 0.000e+0 Identity = 527/853 (61.78%), Postives = 631/853 (73.97%), Query Frame = -2 Query: 592 MSLFQSAA-----VDQLSNGYDH---RLSSKRKFDDYA--------FSFDEE------DPLVPVRMRKDDHTHQGAYPITAVHHSSKAPASSFPTXX----------XXXXXXXXXXXXXXXXXXXSRLQFFIRMISEGNTIVVQANSEDTVKSLHERIQVMTGIPVIEQRLIYRGKQLQWEQSLADCSIQNDAGLQLVGRMRSTDHPQTWQVMDDMISVICRLCRGETPPSPTKHIKDCLTNFFTIAPKDNNDSGPAHLQIFMASSAPAALVMLYMSPIKKNKMCADDSIRHILTQYRSALPKHLHSYCAPILLEFCKLLRKVVSEDSLYEACRSALGMLLESVGTS---RGLMLPE-VKGLIVIQDIFPFVSELADKISKNLESSVDSTSSGEPLSSDVRDFTAFLNPLRSTILERVAFRIPISVKWKKKDNSNPPYGEAVEFLHTIFNDLLGKMENCLIRVEENLAATGSSEGEYLSSEWSQYLAILKELNGISKLYQGAEEQFWMLLRNRKSSLCALIIRFAKRNEDNRWLLEHKDVTDFESRRHLAMMMFPEVKEDYEELHEMLIDRSQLLSESFQYIAHANPESLHAGLFMEFKNEEATGPGVLREWFFLVCQAIFNPENALFVPCSNDRRRFFPNPASRVDPSHLEYFRFAGRVIALALMHKVQVGVVFDRVFFQQLAGMH-ISLEDIRETDPCLYSSCKKILEMDAEFIDSDALGLTFVREVEELGSRRLVELVAGGKNIVVNSKNRQEYVNLLIRDRFVTSISEQVDHFSQGFGHIL---SNS--------RLQKFFFQSLELEDLDWMLYGSESPICIEDWKAHTEYNGYTENDPQINWFWEI 3006 MSL +SAA V Q S DH RLSSKRK DDY EE LV VRMRKD+ + AV+ SS F S + S+ S S LQFF+RM+SEG +V+QA++ DTVKS+HERIQ +TGIP+ EQRLIYRGKQLQWEQSLA+CSIQNDA LQLVGRMRST+HP WQV+DDMIS+ICRLC+GE + K IK C++ +F++ PK+ NDS +HLQIFM+SSAPAALVMLY+SPIK+NK ++ +++H L R++L K L++ CAPILLEFCKLLR+V ED LY +CR+ALG LLESV +S G LP+ VK LI +Q+IFPFVSEL++++S++L SSV+ST G PL SDVRDF+AFL PL I ++V R ISV + +P YGE +EFLH IF LL +M+ CL+++E++LA G +G+ + WSQYLAILKELN ISKLY+ AEE+FW +LR R+SS CAL++ +A+R +DN+W++ HKDV DFESRRHLAMMMF EVKEDYEELHEMLIDRS LL ESF+YI A+PESLH GLFMEFKNEEATGPGVLREWFFLVCQAIFNP+NALFV C +D RRF+PNPAS VDP HLEYF FAGRVIALALMHKVQVG+VFDR+FFQQLAG ISLEDI + DPCLYSSCKKIL+MDAEFIDSDALGLTF RE+EELG+RR+VEL GGK+IVVNSKNR EYV LLI+ +FV SIS QV F QGF +L S+S RLQ FFQ LEL+DLD ML+GSES I +EDWKAHTEYNGY END QI WFW++ Sbjct: 1 MSLVESAATAVDCVHQRSGAADHQYHRLSSKRKLDDYGGPNFDDYDDDDQEEGDNAIFSDLVSVRMRKDE--------LNAVNSSSDGSPCPFSAGTSQHLDSRVFDAQSASYGTSSSRPKSTRSPSSLQFFVRMLSEGYNLVIQADANDTVKSIHERIQAITGIPLFEQRLIYRGKQLQWEQSLAECSIQNDASLQLVGRMRSTEHPHAWQVIDDMISIICRLCKGEPYSNEPKDIKSCMSEYFSMTPKEENDSATSHLQIFMSSSAPAALVMLYVSPIKENKQHSEGAVKHFLGLIRNSLHKPLYNQCAPILLEFCKLLRRVGYEDPLYVSCRNALGSLLESVASSNSSHGSALPDNVKELIGVQEIFPFVSELSERLSRDLVSSVESTGVG-PLLSDVRDFSAFLLPLNKAITQQVGSRGRISVLLDGRGYKHPLYGEEIEFLHRIFRQLLCRMDQCLLKMEDHLAGKGKGDGDIAHTRWSQYLAILKELNSISKLYEDAEERFWAVLRLRRSSFCALVVNYARRTDDNQWIVNHKDVLDFESRRHLAMMMFAEVKEDYEELHEMLIDRSHLLEESFEYIGRADPESLHGGLFMEFKNEEATGPGVLREWFFLVCQAIFNPQNALFVACPHDCRRFYPNPASVVDPLHLEYFAFAGRVIALALMHKVQVGIVFDRMFFQQLAGNSLISLEDICDADPCLYSSCKKILQMDAEFIDSDALGLTFAREIEELGARRVVELCPGGKSIVVNSKNRDEYVKLLIQHQFVKSISAQVSRFGQGFADMLCKPSDSSLNMFCKFRLQTSFFQGLELQDLDLMLHGSESAISVEDWKAHTEYNGYKENDSQIVWFWKV 844 HSP 2 Score: 127.487 bits (319), Expect = 2.053e-26 Identity = 67/87 (77.01%), Postives = 76/87 (87.36%), Query Frame = -2 Query: 334 IVREMSAEQRKVLLFFWTSLKHLPVEGFRGLASQLYIYKXXXXXXXXXXXHTCFYRLCFPPYPSRAEMQKRLNVVTQEHVGCSFGTW 594 IV EMS EQRK+LLFFWTS+K+LPVEGFRGLAS+LYIY+SSEPH+ LPSSHTCFYRLCFPPY S +Q RL ++TQEH G SFGTW Sbjct: 937 IVEEMSTEQRKILLFFWTSVKYLPVEGFRGLASRLYIYRSSEPHDRLPSSHTCFYRLCFPPYSSMRMLQDRLRIITQEHFGSSFGTW 1023
BLAST of g.arboreum_cottongen_reftransV1_0013233 vs. ExPASy TrEMBL
Match: U5G5J4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s01330g PE=4 SV=1) HSP 1 Score: 994.571 bits (2570), Expect = 0.000e+0 Identity = 535/917 (58.34%), Postives = 647/917 (70.56%), Query Frame = -2 Query: 334 MSLFQSAAVDQL----SNGYDHRLSSKRKFDDYAFSFDEEDP----LVPVRMRKDD-HTHQGAYPITAVHHSSKAPASSFPTXXXXXXX----------XXXXXXXXXXXXXXSRLQFFIRMISEGNTIVVQANSEDTVKSLHERIQVMTGIPVIEQRLIYRGKQLQWEQSLADCSIQNDAGLQLVGRMRSTDHPQTWQVMDDMISVICRLCRGETP----PSPTKHIKDCLTNFFTIAPKDNNDSGPAHLQIFMASSAPAALVMLYMSPIKKNKMCADDSIRHILTQYRSALPKHLHSYCAPILLEFCKLLRKVVSEDSLYEACRSALGMLLESVGTSRGLML---PEVKGLIVIQDIFPFVSELADKISKNLESSVDSTSSGEPLSSDVRDFTAFLNPLRSTILERVAFRIPISVKWKKKDNSNPPYGEAVEFLHTIFNDLLGKMENCLIRVEENLAATGSSEGEYLSSEWSQYLAILKELNGISKLYQGAEEQFWMLLRNRKSSLCALIIRFAKRNEDNRWLLEHKDVTDFESRRHLAMMMFPEVKEDYEELHEMLIDRSQLLSESFQYIAHANPESLHAGLFMEFKNEEATGPGVLREWFFLVCQAIFNPENALFVPCSNDRRRFFPNPASRVDPSHLEYFRFAGRVIALALMHKVQVGVVFDRVFFQQLAGMHISLEDIRETDPCLYSSCKKILEMDAEFIDSDALGLTFVREVEELGSRRLVELVAGGKNIVVNSKNRQEYVNLLIRDRFVTSISEQVDHFSQGFGHILSNSRLQKFFFQSLELEDLDWMLYGSESPICIEDWKAHTEYNGYTENDPQINWFWEIVREMSAEQRKVLLFFWTSLKHLPVEGFRGLASQLYIYKXXXXXXXXXXXHTCFYRLCFPPYPSRAEMQKRLNVVTQEHVGCSFGTW 3006 MSL QS D L S+ DHR+SSKRK DD D+ D L+ VRMRKDD + G S + + T + D+ + S S SRLQFFIRMIS+ +V+ ANS D+VKSLHE+I+ MTGIPVIEQRLIY GKQLQ+E L+D SI+ND+ L LVGRMRST HP+T Q+++DM+S ICR+C+ P P +KHIK+ + FF++ PKD+N+ HL +F+++SAPAALV LY+S IK NK CA+ +IRH L R +LPK+LH C PI++EFC LLRKV S+D LY CRS LG LLE+ G + G E KG +V+Q+IFPFVSEL K+SK+L SV S P + V+DF+AFL PL S I E+ F PIS+ KK+ + P Y + +E LH IF DLL ME CL +++++ + EGE + WSQYL ILKELN I+KLY+GAEE+FW +LR RK+SLC LI+R+AKR +D++WLL+HKDVTDF+SRRHLAMMMFPE+KEDYE+LHEMLIDRSQLL+ESF+YI HA ++LH GLFMEFKNEEATGPGVLREWFFLV QAIF+P+NALFV C +DRRRF+PNP DIR+ DPCLYSSCK+IL+MD EFIDSDALGLTFVREVEELGS ++VEL GGK IVVNSKNR++YVNLLI+ FVTSIS+ V F++GF IL N QK FF+SLELEDLDWMLYGSES IC+EDWKAHTEY+ Y E DPQI+WFWEIV MSA+QRKVLLFFWTS+K+LPVEGFRGLASQLYIYKS+EPH+HLPSSHTCFYRLCFPPYPS A MQ RL V+TQEHVGCSFGTW Sbjct: 1 MSLPQSPTADSLHQQRSSTVDHRVSSKRKLDD----VDDNDAVFSDLISVRMRKDDTESSTGNNQEQQQQPPSISSTNQLSTRVSDASTSSSSTNFPSSAMGTTTPSPLRRSQSRLQFFIRMISDATHVVINANSSDSVKSLHEQIRAMTGIPVIEQRLIYLGKQLQYENKLSDYSIENDSILHLVGRMRSTRHPRTCQLINDMVSYICRICKSILPCGVHPYTSKHIKELMNEFFSLTPKDDNEDASGHLNVFLSNSAPAALVALYVSSIKGNKECAEGAIRHFLNSCRISLPKNLHLQCVPIVMEFCNLLRKVGSDDPLYVVCRSCLGSLLENGGGTCGWRYHGGEEGKG-VVMQEIFPFVSELGSKLSKDLTGSV--AESMGPSEAVVKDFSAFLIPLHSVISEQRGFGSPISMPLKKRAFNCPLYAKEIEQLHVIFIDLLDIMEKCLEKMQDSSNLKTNGEGELNHTGWSQYLFILKELNNIAKLYKGAEEKFWTVLRLRKASLCVLIVRYAKRTDDHQWLLQHKDVTDFDSRRHLAMMMFPELKEDYEDLHEMLIDRSQLLAESFEYIVHAESDTLHVGLFMEFKNEEATGPGVLREWFFLVTQAIFDPQNALFVACPSDRRRFYPNP-------------------------------------------------DIRDADPCLYSSCKQILQMDPEFIDSDALGLTFVREVEELGSIKVVELCPGGKGIVVNSKNREKYVNLLIQHHFVTSISDPVSRFARGFSDIL-NPGEQKLFFRSLELEDLDWMLYGSESAICVEDWKAHTEYSSYKETDPQISWFWEIVGRMSADQRKVLLFFWTSVKYLPVEGFRGLASQLYIYKSTEPHDHLPSSHTCFYRLCFPPYPSMAIMQDRLRVITQEHVGCSFGTW 860
BLAST of g.arboreum_cottongen_reftransV1_0013233 vs. ExPASy TrEMBL
Match: G7JKJ3_MEDTR (E3 ubiquitin-protein ligase UPL5-like protein OS=Medicago truncatula GN=MTR_4g133120 PE=4 SV=2) HSP 1 Score: 991.104 bits (2561), Expect = 0.000e+0 Identity = 507/881 (57.55%), Postives = 636/881 (72.19%), Query Frame = -2 Query: 334 HRLSSKRKFDDYAFSFDEEDPLVPVRMRKDDHTHQGAYPITAVHHSSKAPASSFPTXXXXXXXXXXXXXXXXXXXXXSRLQFFIRMISEGNTIVVQANSEDTVKSLHERIQVMTGIPVIEQRLIYRGKQLQWEQSLADCSIQNDAGLQLVGRMRSTDHPQTWQVMDDMISVICRLCRGETPPSPTKHIKDCLTNFFTIA----PKDNNDSGPAHLQIFMASSAPAALVMLYMSPIKKNKMCADDSIRHILTQYRSALPKHLHSYCAPILLEFCKLLRKVVSEDSLYEACRSALGMLLESVGTSRGLMLPEV-KGLIVIQDIFPFVSELADKISKNLESSVDSTSSGEPLSSDVRDFTAFLNPLRSTILERVAFRIPISVKWKKKDNSNPPYGEAVEFLHTIFNDLLGKMENCLIRVEENLAATGSS-EGEYLSSEWSQYLAILKELNGISKLYQGAEEQFWMLLRNRKSSLCALIIRFAKRNEDNRWLLEHKDVTDFESRRHLAMMMFPEVKEDYEELHEMLIDRSQLLSESFQYIAHANPESLHAGLFMEFKNEEATGPGVLREWFFLVCQAIFNPENALFVPCSNDRRRFFPNPASRVDPS-HLEYFRFAGRVIALALMHKVQVGVVFDRVFFQQLAGMHISLEDIRETDPCLYSSCKKILEMDAEFIDSDALGLTFVREVEELGSRRLVELVAGGKNIVVNSKNRQEYVNLLIRDRFVTSISEQVDHFSQGFGHILSNSRLQKFFFQSLELEDLDWMLYGSESPICIEDWKAHTEYNGYTENDPQINWFWEIVREMSAEQRKVLLFFWTSLKHLPVEGFRGLASQLYIYKXXXXXXXXXXXHTCFYRLCFPPYPSRAEMQKRLNVVTQEHVGCSFGTW 2955 +R SSKRK D+ + +D LV VRMRKD+ T T +H S S P + FFIRM+S+G +V+ A E+TVKS+HERI+ M GIP+ EQRLI+ GKQLQWEQ+L +C IQNDA L LVGRMRST+HPQ WQV++DM+S++ LC G P K IK LT + +A PK + DS ++ QIFM SSA + LV LY+SP NK C+D I+H L +++L K H+ A + LEFCKLL +V + D LY CRS+LG LE+ S E KGL+++QD+FPFV ELAD + +NL+ S++S S PL + V DF AFL P+R+ I ++ A R ++ K+ N N E +E+L +++ LL K++ CL ++++ E Y S YL+ILKEL+ ISKLY GA E+ +L RKS +C +I+++AKR ++++W+LE+K+VT+FE+RRHLAMM+FPEVKEDYEELHEMLIDRSQLL+ESF+YIA A+PESL AGLFMEFKNEEATGPGVLREWF LVCQA+FN E+ALFV C DR RF PN AS+V + HLEYF F GRVIALALMHKVQVG+VFDRVFF QLAG I+LEDIR+ DP LY SCK+IL+MD++FIDSDALGLTF+REVEELG R+ ++L GGKNIVVNSKNR +YV+LLI+DRFVTSI+EQV HF++GF ILS+S+LQ+FFFQSLE EDLDWML GSE I +EDWKAHTEYNGYT+ D QI+WFWEIV M+AE++KVLLFFWTS+K+LPVEGFRGL S+L+IYKS E + LPSSHTCFYRLCFP Y S MQ RL V+TQEH+G SFGTW Sbjct: 17 NRSSSKRKLDEDDENNALDDDLVYVRMRKDETTK------TTLHSSWTGGGGGSSGGDGGGAFSKKKSP----------IHFFIRMMSKGYNVVIHAYPEETVKSIHERIEEMKGIPLFEQRLIFNGKQLQWEQTLVECGIQNDANLHLVGRMRSTEHPQAWQVVNDMVSIVYDLCHGVNLPDAVKSIKSLLTTYINLALAPKPKLDADSATSYFQIFMNSSAISVLVTLYVSPYTGNKACSDTCIKHFLNGCKTSLSKTFHTQAARVALEFCKLLSRVGTNDPLYLFCRSSLGGFLEAAEISLAASEDENHKGLVLVQDLFPFVRELADSLLRNLDLSLESPSLANPLLNSVEDFQAFLVPVRTGIEQQQALRGCVAYHQKQDKNKNGLVAEEIEYLRLLYDQLLSKIDTCLQKMDKRFTDKEMVFEENYFYPACSLYLSILKELHKISKLYDGATEELCHVLMRRKSVMCLIIVKYAKRADEHQWILEYKNVTNFEARRHLAMMIFPEVKEDYEELHEMLIDRSQLLTESFEYIARADPESLRAGLFMEFKNEEATGPGVLREWFLLVCQALFNQEHALFVACPKDRTRFLPNSASKVQHNLHLEYFSFCGRVIALALMHKVQVGIVFDRVFFLQLAGKPITLEDIRDADPDLYRSCKQILDMDSDFIDSDALGLTFIREVEELGQRKAIQLCPGGKNIVVNSKNRVKYVDLLIKDRFVTSIAEQVSHFAKGFAEILSSSKLQQFFFQSLESEDLDWMLRGSEDAISVEDWKAHTEYNGYTDTDIQISWFWEIVGRMTAEEKKVLLFFWTSVKYLPVEGFRGLGSRLHIYKSHESGDRLPSSHTCFYRLCFPAYSSMPVMQARLKVITQEHIGSSFGTW 881
BLAST of g.arboreum_cottongen_reftransV1_0013233 vs. ExPASy TrEMBL
Match: A0A0D2QID4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G183200 PE=4 SV=1) HSP 1 Score: 970.304 bits (2507), Expect = 0.000e+0 Identity = 488/622 (78.46%), Postives = 547/622 (87.94%), Query Frame = -2 Query: 334 LPKHLHSYCAPILLEFCKLLRKVVSEDSLYEACRSALGMLLESVGTSRGLMLPEVKGLIVIQDIFPFVSELADKISKNLESSVDSTSSGEPLSSDVRDFTAFLNPLRSTILERVAFRIPISVKWKKKDNSNPPYGEAVEFLHTIFNDLLGKMENCLIRVEENLAATGSSEGEYLSSEWSQYLAILKELNGISKLYQGAEEQFWMLLRNRKSSLCALIIRFAKRNEDNRWLLEHKDVTDFESRRHLAMMMFPEVKEDYEELHEMLIDRSQLLSESFQYIAHANPESLHAGLFMEFKNEEATGPGVLREWFFLVCQAIFNPENALFVPCSNDRRRFFPNPASRVDPSHLEYFRFAGRVIALALMHKVQVGVVFDRVFFQQLAGMHISLEDIRETDPCLYSSCKKILEMDAEFIDSDALGLTFVREVEELGSRRLVELVAGGKNIVVNSKNRQEYVNLLIRDRFVTSISEQVDHFSQGFGHILSNSRLQKFFFQSLELEDLDWMLYGSESPICIEDWKAHTEYNGYTENDPQINWFWEIVREMSAEQRKVLLFFWTSLKHLPVEGFRGLASQLYIYKXXXXXXXXXXXHTCFYRLCFPPYPSRAEMQKRLNVVTQEHVGCSFGTW 2199 LPK LHSYCAPI LEFCKLLRKVV+EDSLY CRS L +LLESV +S GLM +VKG V Q+IFPF +EL +S+ L+SS+ ST+S P SS R+F AFLNPLRS I+E+V RIPIS+ + +P Y + + LH IF+ LL KM+NCLIRVEE L A GS+ E++ S WSQYL+ILKELNGISKLYQGAEE+FWM+LRN K+SLCALIIRF++R++DN+WLLEHKDVTDFESRRHL MMMFPEVK+DYEELHEMLIDRSQLL+ESF+YIA +PESLHAGLFMEFKNEEATGPGVLREWF LVCQAIFNPENALF+PC+ DRRRFFPNPASR+DP HLEYF FAGRVIALALMHKVQVG+VFDRVFF QLAGM ISLEDIRE DPCLYSSCKKILEMDAEFIDSDALGLTFVREVEELGSR +VEL AGGK+IVVNS+NRQEYVNLLIRDRF TS SEQVD+FSQGFGHILSNSRLQK FFQSLELEDLD MLYGSESPIC++DWKAHTEYNGY E+DPQI WFWEIVREMSA+QRK LLFFWTS+K+LPVEGFR LAS+LYIYK+SEP ++LPSSHTCFYR+CFPPYPS EM+KRLNV+TQEH+ CSFGTW Sbjct: 83 LPKELHSYCAPIALEFCKLLRKVVNEDSLYAWCRSTLSVLLESVSSSMGLMRTKVKGFTV-QEIFPFFNELVSHLSEELDSSLYSTTSEGPSSSHFREFVAFLNPLRSAIIEQVESRIPISIDY------HPLYRDEIRNLHLIFDKLLHKMKNCLIRVEEILVARGSNGDEFVHSGWSQYLSILKELNGISKLYQGAEEKFWMVLRNMKASLCALIIRFSRRDDDNQWLLEHKDVTDFESRRHLVMMMFPEVKDDYEELHEMLIDRSQLLAESFEYIARVDPESLHAGLFMEFKNEEATGPGVLREWFLLVCQAIFNPENALFLPCAYDRRRFFPNPASRMDPLHLEYFSFAGRVIALALMHKVQVGIVFDRVFFLQLAGMDISLEDIREADPCLYSSCKKILEMDAEFIDSDALGLTFVREVEELGSRTVVELCAGGKSIVVNSRNRQEYVNLLIRDRFSTSTSEQVDYFSQGFGHILSNSRLQKIFFQSLELEDLDRMLYGSESPICVDDWKAHTEYNGYKESDPQITWFWEIVREMSADQRKQLLFFWTSVKYLPVEGFRCLASRLYIYKTSEPCDYLPSSHTCFYRICFPPYPSMGEMRKRLNVITQEHIRCSFGTW 697 HSP 2 Score: 92.8189 bits (229), Expect = 5.863e-16 Identity = 50/79 (63.29%), Postives = 55/79 (69.62%), Query Frame = -3 Query: 2286 PDSNSLAVCGRRTTHKPGRSWTT*SPLFAAFAEEKHPLPRPNTSKTA*PTFLRLLQRTIMTPALLTCRYLWHLRLLPLW 2522 P SNS AVCG TT KPG+SWTT SPLF FAEEK +P+P SK A +LL RT LLTCRYLW+LRLLPLW Sbjct: 2 PVSNSSAVCGPLTTRKPGKSWTTWSPLFPPFAEEKRSIPQPKASKVAWTNSSQLLTRTTARLLLLTCRYLWYLRLLPLW 80
BLAST of g.arboreum_cottongen_reftransV1_0013233 vs. ExPASy Swiss-Prot
Match: UPL5_ARATH (E3 ubiquitin-protein ligase UPL5 OS=Arabidopsis thaliana GN=UPL5 PE=1 SV=1) HSP 1 Score: 845.499 bits (2183), Expect = 0.000e+0 Identity = 429/797 (53.83%), Postives = 565/797 (70.89%), Query Frame = -2 Query: 334 RLQFFIRMISEGNTIVVQANSEDTVKSLHERIQVMTGIPVIEQRLIYRGKQLQWEQSLADCSIQNDAGLQLVGRMRSTDHPQTWQVMDDMISVICRLCRGETPPSPTKHIKDCLTNFFTIAPKDNNDSGPAHLQIFMASSAPAALVMLYMSPIKKNKMCADDSIRHILTQYRSALPKHLHSYCAPILLEFCKLLRKVVSEDSLYEACRSALGMLLESVGTSRGLMLPEVKGLIVIQDIFPFVSELADKISKNLESSVDSTSSGEPLSSDVRDFTAFLNPLRSTILERVAFRIPISVKWKKKDNSNPPYGEAVEFLHTIFNDLLGKMENCLIRVEENLAATGSSEGEYLSSEWSQYLAILKELNGISKLYQGAEEQFWMLLRNRKSSLCALIIRFAKRNEDNRWLLEHKDVTDFESRRHLAMMMFPEVKEDYEELHEMLIDRSQLLSESFQYIAHANPESLHAGLFMEFKNEEATGPGVLREWFFLVCQAIFNPENALFVPCSNDRRRFFPNPASRVDPSHLEYFRFAGRVIALALMHKVQVGVVFDRVFFQQLAGMHISLEDIRETDPCLYSSCKKILEMDAEFIDSDA-LGLTFVREVEELGSRRLVELVAGGKNIVVNSKNRQEYVNLLIRDRFVTSISEQVDHFSQGFGHILSNSRLQKFFFQSLELEDLDWMLYGSESPICIEDWKAHTEYNGYTENDPQINWFWEIVREMSAEQRKVLLFFWTSLKHLPVEGFRGLASQLYIYKXXXXXXXXXXXHTCFYRLCFPPYPSRAEMQKRLNVVTQEHVGCSFGTW 2721 RLQ F+RM+S G TIV+ A DTV+ LH+RI+ T IP +EQR+IY+GKQLQ E SL SI+ DA LQLV RM+ST+HP WQ +DD++ I R+ +GE S +I + + FF + P ++++S +L IF SS PAALVMLY S +++NK CA S++ L+ ALPK+ +YC PI+LEFCKLLRKV + LY CR+ LG +LE+ G+ + + V +IFPF +EL + L + +SG P D + ++F LR I +VAF IPI + + + + LH +F LL M+ C+ RVE +LA E +SS WSQYL+ILK +N +S +YQGA+ Q ++L K S AL+++FAKR +D++W+ E+K+ T+FE+RRHLAM++FP+VKED+EE+HEMLIDRS LLSESF+YI A+PE+LH GLFMEFKNEEATGPGVLREWF+LVCQ IFNP+N LF+ ++D RRF PNPAS+VDP H ++F F GRVIALALMHKVQVGV+FDRVFF QLAG+ ISLEDI++TD +Y+SCK+ILEMD EF DS+A LGLTFV E EELG R +EL GK VNSKNR++YV+LLI RF T I EQV FS+GF +LS+S + FF+ L LEDLD ML G E+PI I+DWKAHTEYNG+ E D QI+WFW+I+++M+ E+++ +LFFWTS K +PVEGFRGL+S+LYIY+ E ++ LP SHTCFYRLC P YP+ M++RL ++ Q+HV SFG W Sbjct: 94 RLQIFVRMMSGGKTIVIHAEKYDTVEKLHQRIEWKTKIPALEQRVIYKGKQLQRENSLTYYSIEQDASLQLVARMQSTEHPVAWQTIDDIMYTISRMYKGENLQS---NINEKIVTFFAMIPVESDESIAKYLNIFSNSSVPAALVMLYASSLERNKSCAKSSVKLFLSNC-VALPKNQKNYCLPIVLEFCKLLRKVCPDQKLYVTCRNTLGSMLETFDNPHGVYNDQYETFGV--EIFPFFTELTGLLLNEL-----AQNSG-PSFCDFQKVSSFWQQLRKVIELKVAFPIPIVLPMQ-----STALEAEIRHLHRLFGSLLTTMDLCMCRVESSLADKEVGNSETMSSSWSQYLSILKIINSMSNIYQGAKGQLAVMLNKNKVSFSALVVKFAKRGDDHQWIFEYKEATNFEARRHLAMLLFPDVKEDFEEMHEMLIDRSNLLSESFEYIVGASPEALHGGLFMEFKNEEATGPGVLREWFYLVCQEIFNPKNTLFLRSADDFRRFSPNPASKVDPLHPDFFEFTGRVIALALMHKVQVGVLFDRVFFLQLAGLKISLEDIKDTDRIMYNSCKQILEMDPEFFDSNAGLGLTFVLETEELGKRDTIELCPDGKLKAVNSKNRKQYVDLLIERRFATPILEQVKQFSRGFTDMLSHSVPPRSFFKRLYLEDLDGMLRGGENPISIDDWKAHTEYNGFKETDRQIDWFWKILKKMTEEEQRSILFFWTSNKFVPVEGFRGLSSKLYIYRLYEANDRLPLSHTCFYRLCIPRYPTITLMEQRLRLIAQDHVSSSFGKW 873
BLAST of g.arboreum_cottongen_reftransV1_0013233 vs. ExPASy Swiss-Prot
Match: PUB2_SCHPO (E3 ubiquitin-protein ligase pub2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pub2 PE=1 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 9.210e-53 Identity = 126/388 (32.47%), Postives = 203/388 (52.32%), Query Frame = -2 Query: 337 ESRRHLAMMM-FPEVKEDYEELHEMLIDRSQLLSESFQYIAHANPESLHAGLFMEFKNEEATG-PGVLREWFFLVCQAIFNPENALFVPCSNDRRRFFPNPASRVDPSHLEYFRFAGRVIALALMHKVQVGVVFDRVFFQQLAGMHISLEDIRETDPCLYSSCKKILEMDAEFIDSDALGLTFVREVEELGSRRLVELVAGGKNIVVNSKNRQEYVNLLIRDRFVTSISEQVDHFSQGFGHILSNSRLQKFFFQSLELEDLDWMLYGSESPICIEDWKAHTEYNGYTENDPQINWFWEIVREMSAEQRKVLLFFWTSLKHLPVEGFRGL----ASQLYIYKXXXXXXXXXXXHTCFYRLCFPPYPSRAEMQKRLNVVTQEHVGCSFGT 1482 E +R +A M PE+ + +L ++ + R+ +++ I+ + + L + F+NE+ GV RE+F+++ AIFNP +LF ++D +P S V+P YFRF GRV+ LA+ H+ + V F F++++ + LED+++ D Y S K I D + ++L L F E G V+L+ G+NI VN++N+ Y+ L + VTS EQ + G ++ +S LQ F +LD +L G I ++DWK T+Y YTE D + WFWE++ E S E++ LL F T LP+ GF+ + + + + LP +HTCF RL PPY S+ E++++L + QE G FGT Sbjct: 296 EYQRKIAYMYDRPEMAVNDAQL-QLKVSRATTFEDAYDIISKLSVSDMKKKLLIRFRNEDGLDYGGVSREFFYILSHAIFNPGYSLFEYATDDNYGLQISPLSSVNPDFRSYFRFVGRVMGLAIYHRRYLDVQFVLPFYKRILQKPLCLEDVKDVDEVYYESLKWIKNNDVD----ESLCLNFSVEENRFGESVTVDLIPNGRNIAVNNQNKMNYLKALTEHKLVTSTEEQFNALKGGLNELIPDSVLQIF-----NENELDTLLNGKRD-IDVQDWKRFTDYRSYTETDDIVIWFWELLSEWSPEKKAKLLQFATGTSRLPLSGFKDMHGSDGPRKFTIEKVGHISQLPKAHTCFNRLDIPPYNSKEELEQKLTIAIQETAG--FGT 670
BLAST of g.arboreum_cottongen_reftransV1_0013233 vs. ExPASy Swiss-Prot
Match: HACE1_RAT (E3 ubiquitin-protein ligase HACE1 OS=Rattus norvegicus GN=Hace1 PE=3 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 3.732e-52 Identity = 130/364 (35.71%), Postives = 186/364 (51.10%), Query Frame = -2 Query: 340 MLIDRSQLLSESFQYIAHANPESLHAGLFMEFKNEEATGPGVLREWFFLVCQAIFNPENALFVPCSNDRRRFFPNPASRVDPSHLEYFRFAGRVIALALMHKVQVGVVFDRVFFQQLAGMHISLEDIRETDPCLYSSCKKILEMDAEFIDSDALGLTFVREVEELGSRRLVELVAGGKNIVVNSKNRQEYVNLLIRDRFVTSISEQVDHFSQGFGHILSNSRLQKFFFQSLELEDLDWMLYGSESPICIEDWKAHTEY-NGYTENDPQINWFWEIVREMSAEQRKVLLFFWTSLKHLPVEGFRGLAS-----QLYIYKXXXXXXXXXXXHTCFYRLCFPPYPSRAEMQKRLNVVTQEHVGCSFG 1413 +L+ R + S + ++ AN L G+ + F EE G GV+REWF ++ I NP+ ALF S D F PN S V+P HL YFRFAG+++ LAL H+ V + F R F++ + G+ ++ +D+ DP + + IL+ D I L LTF E + G+ V L GG +I+V N+ EYV L+ R +I Q++ F QGF + S +Q F ELE +L I + DW +TEY +GY DP I WFWE+V +M+ E+R +LL F T +P GF + I LP+S TC L P YPS+ ++ RL V H G S+G Sbjct: 555 LLVHRDSIFRSSCEIVSKANCAKLKQGIAVRFHGEEGMGQGVVREWFDILSNEIVNPDYALFTQ-SADGTTFQPNSNSYVNPDHLNYFRFAGQILGLALNHRQLVNIYFTRSFYKHILGIPVNYQDVASIDPEYAKNLQWILDND---ISDLGLELTFSVETDVFGAMEEVPLKPGGGSILVTQNNKAEYVQLVTELRMTRAIQPQINAFLQGFHMFIPPSLIQ--LFDEYELE----LLLSGMPEIDVNDWIKNTEYTSGYEREDPVIQWFWEVVEDMTQEERVLLLQFVTGSSRVPHGGFANIMGGSGLQNFTIAAVPYTPNLLPTSSTCINMLKLPEYPSKEILKDRLLVAL--HCG-SYG 905
BLAST of g.arboreum_cottongen_reftransV1_0013233 vs. ExPASy Swiss-Prot
Match: HACE1_BOVIN (E3 ubiquitin-protein ligase HACE1 OS=Bos taurus GN=HACE1 PE=3 SV=3) HSP 1 Score: 201.445 bits (511), Expect = 7.823e-52 Identity = 129/364 (35.44%), Postives = 186/364 (51.10%), Query Frame = -2 Query: 340 MLIDRSQLLSESFQYIAHANPESLHAGLFMEFKNEEATGPGVLREWFFLVCQAIFNPENALFVPCSNDRRRFFPNPASRVDPSHLEYFRFAGRVIALALMHKVQVGVVFDRVFFQQLAGMHISLEDIRETDPCLYSSCKKILEMDAEFIDSDALGLTFVREVEELGSRRLVELVAGGKNIVVNSKNRQEYVNLLIRDRFVTSISEQVDHFSQGFGHILSNSRLQKFFFQSLELEDLDWMLYGSESPICIEDWKAHTEY-NGYTENDPQINWFWEIVREMSAEQRKVLLFFWTSLKHLPVEGFRGLAS-----QLYIYKXXXXXXXXXXXHTCFYRLCFPPYPSRAEMQKRLNVVTQEHVGCSFG 1413 +L+ R + S + ++ AN L G+ + F EE G GV+REWF ++ I NP+ ALF S D F PN S V+P HL YFRFAG+++ LAL H+ V + F R F++ + G+ ++ +D+ DP + + IL+ D I L LTF E + G+ V L GG +I+V N+ EYV L+ R +I Q++ F QGF + S +Q F ELE +L I + DW +TEY +GY DP I WFWE+V +++ E+R +LL F T +P GF + I LP+S TC L P YPS+ ++ RL V H G S+G Sbjct: 555 LLVHRDSIFRSSCEVVSKANCAKLKQGIAVRFHGEEGMGQGVVREWFDILSNEIVNPDYALFTQ-SADGTTFQPNSNSSVNPDHLNYFRFAGQILGLALNHRQLVNIYFTRSFYKHILGIPVNYQDVASIDPEYAKNLQWILDND---ISDLGLELTFSVETDVFGAMEEVPLKPGGGSILVTQNNKAEYVQLVTELRMTRAIQPQINAFLQGFHMFIPPSLIQ--LFDEYELE----LLLSGMPEIDVSDWIKNTEYTSGYEREDPVIQWFWEVVEDITPEERVLLLQFVTGSSRVPHGGFANIMGGSGLQNFTIAAVPYTPNLLPTSSTCINMLKLPEYPSKEILKDRLLVAL--HCG-SYG 905
BLAST of g.arboreum_cottongen_reftransV1_0013233 vs. ExPASy Swiss-Prot
Match: HACE1_DANRE (E3 ubiquitin-protein ligase HACE1 OS=Danio rerio GN=hace1 PE=3 SV=2) HSP 1 Score: 201.06 bits (510), Expect = 9.952e-52 Identity = 130/364 (35.71%), Postives = 187/364 (51.37%), Query Frame = -2 Query: 340 MLIDRSQLLSESFQYIAHANPESLHAGLFMEFKNEEATGPGVLREWFFLVCQAIFNPENALFVPCSNDRRRFFPNPASRVDPSHLEYFRFAGRVIALALMHKVQVGVVFDRVFFQQLAGMHISLEDIRETDPCLYSSCKKILEMDAEFIDSDALGLTFVREVEELGSRRLVELVAGGKNIVVNSKNRQEYVNLLIRDRFVTSISEQVDHFSQGFGHILSNSRLQKFFFQSLELEDLDWMLYGSESPICIEDWKAHTEY-NGYTENDPQINWFWEIVREMSAEQRKVLLFFWTSLKHLPVEGFRGLAS-----QLYIYKXXXXXXXXXXXHTCFYRLCFPPYPSRAEMQKRLNVVTQEHVGCSFG 1413 +L+ R L S + ++ ++ E L G+ + F EE G GV+REWF ++ I NP+ ALF S D F PN S V+P HL YFRFAG+++ LAL H+ V + F R F++ + G+ +S +D+ DP + + IL+ D I L LTF E + G+ V L GG I V N++EYV L+ R +I Q++ F QGF + S +Q F ELE +L I + DWK +TEY +GY +P I WFWE+V ++ E+R +LL F T +P GF L + + LP+S TC L P YPS+ ++ RL V H G S+G Sbjct: 550 LLVHRDSLFRSSCEVVSKSSNEKLKQGIAVRFHGEEGMGQGVVREWFDILSNEIINPDYALFTQ-SADGTTFQPNSNSSVNPDHLNYFRFAGQILGLALYHRQLVNIYFTRSFYKHILGIPVSYQDVSSIDPEYAKNLQWILDND---ISDLGLELTFSVETDVFGTMEEVPLKPGGTTIQVTQDNKEEYVQLVTELRMTRAIQPQINAFLQGFHTFIPPSLIQ--LFDEYELE----LLLSGMPEIDVMDWKRNTEYTSGYDLQEPVIQWFWEVVENLTQEERVLLLQFVTGSSRVPHGGFAFLMGGSGLQKFTVAAVPYTSNLLPTSSTCINMLKLPEYPSKDVLRDRLLVAL--HCG-SYG 900
BLAST of g.arboreum_cottongen_reftransV1_0013233 vs. ExPASy Swiss-Prot
Match: HACE1_HUMAN (E3 ubiquitin-protein ligase HACE1 OS=Homo sapiens GN=HACE1 PE=1 SV=2) HSP 1 Score: 201.06 bits (510), Expect = 1.112e-51 Identity = 129/364 (35.44%), Postives = 186/364 (51.10%), Query Frame = -2 Query: 340 MLIDRSQLLSESFQYIAHANPESLHAGLFMEFKNEEATGPGVLREWFFLVCQAIFNPENALFVPCSNDRRRFFPNPASRVDPSHLEYFRFAGRVIALALMHKVQVGVVFDRVFFQQLAGMHISLEDIRETDPCLYSSCKKILEMDAEFIDSDALGLTFVREVEELGSRRLVELVAGGKNIVVNSKNRQEYVNLLIRDRFVTSISEQVDHFSQGFGHILSNSRLQKFFFQSLELEDLDWMLYGSESPICIEDWKAHTEY-NGYTENDPQINWFWEIVREMSAEQRKVLLFFWTSLKHLPVEGFRGLAS-----QLYIYKXXXXXXXXXXXHTCFYRLCFPPYPSRAEMQKRLNVVTQEHVGCSFG 1413 +L+ R + S + ++ AN L G+ + F EE G GV+REWF ++ I NP+ ALF S D F PN S V+P HL YFRFAG+++ LAL H+ V + F R F++ + G+ ++ +D+ DP + + IL+ D I L LTF E + G+ V L GG +I+V N+ EYV L+ R +I Q++ F QGF + S +Q F ELE +L I + DW +TEY +GY DP I WFWE+V +++ E+R +LL F T +P GF + I LP+S TC L P YPS+ ++ RL V H G S+G Sbjct: 555 LLVHRDSIFRSSCEVVSKANCAKLKQGIAVRFHGEEGMGQGVVREWFDILSNEIVNPDYALFTQ-SADGTTFQPNSNSYVNPDHLNYFRFAGQILGLALNHRQLVNIYFTRSFYKHILGIPVNYQDVASIDPEYAKNLQWILDND---ISDLGLELTFSVETDVFGAMEEVPLKPGGGSILVTQNNKAEYVQLVTELRMTRAIQPQINAFLQGFHMFIPPSLIQ--LFDEYELE----LLLSGMPEIDVSDWIKNTEYTSGYEREDPVIQWFWEVVEDITQEERVLLLQFVTGSSRVPHGGFANIMGGSGLQNFTIAAVPYTPNLLPTSSTCINMLKLPEYPSKEILKDRLLVAL--HCG-SYG 905
BLAST of g.arboreum_cottongen_reftransV1_0013233 vs. ExPASy Swiss-Prot
Match: HACE1_MOUSE (E3 ubiquitin-protein ligase HACE1 OS=Mus musculus GN=Hace1 PE=1 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 1.344e-51 Identity = 129/364 (35.44%), Postives = 186/364 (51.10%), Query Frame = -2 Query: 340 MLIDRSQLLSESFQYIAHANPESLHAGLFMEFKNEEATGPGVLREWFFLVCQAIFNPENALFVPCSNDRRRFFPNPASRVDPSHLEYFRFAGRVIALALMHKVQVGVVFDRVFFQQLAGMHISLEDIRETDPCLYSSCKKILEMDAEFIDSDALGLTFVREVEELGSRRLVELVAGGKNIVVNSKNRQEYVNLLIRDRFVTSISEQVDHFSQGFGHILSNSRLQKFFFQSLELEDLDWMLYGSESPICIEDWKAHTEY-NGYTENDPQINWFWEIVREMSAEQRKVLLFFWTSLKHLPVEGFRGLAS-----QLYIYKXXXXXXXXXXXHTCFYRLCFPPYPSRAEMQKRLNVVTQEHVGCSFG 1413 +L+ R + S + ++ AN L G+ + F EE G GV+REWF ++ I NP+ ALF S D F PN S V+P HL YFRFAG+++ LAL H+ V + F R F++ + G+ ++ +D+ DP + + IL+ D I L LTF E + G+ V L GG +I+V N+ EYV L+ R +I Q++ F QGF + S +Q F ELE +L I + DW +TEY +GY DP I WFWE+V +++ E+R +LL F T +P GF + I LP+S TC L P YPS+ ++ RL V H G S+G Sbjct: 555 LLVHRDSIFRSSCEIVSKANCAKLKQGIAVRFHGEEGMGQGVVREWFDILSNEIVNPDYALFTQ-SADGTTFQPNSNSYVNPDHLNYFRFAGQILGLALNHRQLVNIYFTRSFYKHILGIPVNYQDVASIDPEYAKNLQWILDND---ISDLGLELTFSVETDVFGAMEEVPLKPGGGSILVTQNNKAEYVQLVTELRMTRAIQPQINAFLQGFHMFIPPSLIQ--LFDEYELE----LLLSGMPEIDVNDWIKNTEYTSGYEREDPVIQWFWEVVEDITQEERVLLLQFVTGSSRVPHGGFANIMGGSGLQNFTIAAVPYTPNLLPTSSTCINMLKLPEYPSKEILKDRLLVAL--HCG-SYG 905
BLAST of g.arboreum_cottongen_reftransV1_0013233 vs. ExPASy Swiss-Prot
Match: HACE1_XENTR (E3 ubiquitin-protein ligase HACE1 OS=Xenopus tropicalis GN=hace1 PE=2 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 2.803e-51 Identity = 131/365 (35.89%), Postives = 190/365 (52.05%), Query Frame = -2 Query: 340 MLIDRSQLLSESFQYIAHANPESLHAGLFMEFKNEEATGPGVLREWFFLVCQAIFNPENALFVPCSNDRRRFFPNPASRVDPSHLEYFRFAGRVIALALMHKVQVGVVFDRVFFQQLAGMHISLEDIRETDPCLYSSCKKILEMDAEFIDSDALGLTFVREVEELGSRRLVELVAGGKNIVVNSKNRQEYVNLLIRDRFVTSISEQVDHFSQGFGHILSNSRLQKFFFQSLELEDLDWMLYGSESPICIEDWKAHTEY-NGYTENDPQINWFWEIVREMSAEQRKVLLFFWTSLKHLPVEGF------RGLASQLYIYKXXXXXXXXXXXHTCFYRLCFPPYPSRAEMQKRLNVVTQEHVGCSFG 1413 +L+ R + S + + +N E L G+ + F EE G GV+REWF ++ I NP+ ALF S D F PN S V+P HL YFRFAG ++ LAL H+ V + F R F++ + G+ ++ +D+ DP + + IL+ D I L LTF E + G+ V L GG +I+V +N+ EYV L+ R +I Q++ F QGF + S +Q F ELE +L I + DW +TEY +GY +D I WFWE+V+E++ E+R +LL F T +P GF GL + I + LP+S TC L P YPS+ ++ RL V H G S+G Sbjct: 558 LLVHRDSIFRSSCEVVFKSNCEKLKQGIAVRFHGEEGMGQGVVREWFDILSSEIINPDYALFTQ-SADGTTFQPNSNSSVNPDHLNYFRFAGEILGLALYHRQLVNIYFTRSFYKHILGIPVNYQDVASIDPEYAKNLQWILDND---ISDLGLELTFSVETDVFGAMEEVPLKPGGASILVTQENKAEYVQLVTELRMTRAIQPQINGFLQGFHMFIPPSLIQ--LFDEYELE----LLLSGMPEIDVNDWMKNTEYTSGYERDDQVIQWFWEVVQELTQEERVLLLQFVTGSSRVPHGGFAYIMGGSGLQN-FTIAAVAYTPNLLPTSSTCINMLKLPEYPSKEILKDRLLVAL--HCG-SYG 908
BLAST of g.arboreum_cottongen_reftransV1_0013233 vs. ExPASy Swiss-Prot
Match: HACE1_XENLA (E3 ubiquitin-protein ligase HACE1 OS=Xenopus laevis GN=hace1 PE=2 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 7.954e-51 Identity = 130/365 (35.62%), Postives = 190/365 (52.05%), Query Frame = -2 Query: 340 MLIDRSQLLSESFQYIAHANPESLHAGLFMEFKNEEATGPGVLREWFFLVCQAIFNPENALFVPCSNDRRRFFPNPASRVDPSHLEYFRFAGRVIALALMHKVQVGVVFDRVFFQQLAGMHISLEDIRETDPCLYSSCKKILEMDAEFIDSDALGLTFVREVEELGSRRLVELVAGGKNIVVNSKNRQEYVNLLIRDRFVTSISEQVDHFSQGFGHILSNSRLQKFFFQSLELEDLDWMLYGSESPICIEDWKAHTEY-NGYTENDPQINWFWEIVREMSAEQRKVLLFFWTSLKHLPVEGF------RGLASQLYIYKXXXXXXXXXXXHTCFYRLCFPPYPSRAEMQKRLNVVTQEHVGCSFG 1413 +L+ R + S + + +N E L G+ + F EE G GV+REWF ++ + NP+ ALF S D F PN S V+P HL YFRFAG ++ LAL H+ V + F R F++ + G+ ++ +D+ DP + + IL+ D I L LTF E + G+ V L GG +I+V +N+ EYV L+ R +I Q++ F QGF + S +Q F ELE +L I + DW +TEY +GY +D I WFWE+V+E++ E+R +LL F T +P GF GL + I + LP+S TC L P YPS+ ++ RL V H G S+G Sbjct: 590 LLVHRDSIFRSSCEVVFKSNCEKLKQGIAVRFHGEEGMGQGVVREWFDILSSEMINPDYALFTQ-SADGTTFQPNSNSSVNPDHLNYFRFAGEILGLALYHRQLVNIYFTRSFYKHILGIPVNYQDVASIDPEYAKNLQWILDND---ISDLGLELTFSVETDVFGAMEEVPLKPGGASILVTQENKAEYVQLVTELRMTRAIQPQINGFLQGFHMFIPPSLIQ--LFDEYELE----LLLSGMPEIDVNDWMKNTEYTSGYERDDQVIQWFWEVVQELTQEERVLLLQFVTGSSRVPHGGFAYIMGGSGLQN-FTIAAVAYTANLLPTSSTCINMLKLPEYPSKEILKDRLLVAL--HCG-SYG 940
BLAST of g.arboreum_cottongen_reftransV1_0013233 vs. ExPASy Swiss-Prot
Match: HACE1_CHICK (E3 ubiquitin-protein ligase HACE1 OS=Gallus gallus GN=HACE1 PE=2 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 9.218e-51 Identity = 128/364 (35.16%), Postives = 186/364 (51.10%), Query Frame = -2 Query: 340 MLIDRSQLLSESFQYIAHANPESLHAGLFMEFKNEEATGPGVLREWFFLVCQAIFNPENALFVPCSNDRRRFFPNPASRVDPSHLEYFRFAGRVIALALMHKVQVGVVFDRVFFQQLAGMHISLEDIRETDPCLYSSCKKILEMDAEFIDSDALGLTFVREVEELGSRRLVELVAGGKNIVVNSKNRQEYVNLLIRDRFVTSISEQVDHFSQGFGHILSNSRLQKFFFQSLELEDLDWMLYGSESPICIEDWKAHTEY-NGYTENDPQINWFWEIVREMSAEQRKVLLFFWTSLKHLPVEGFRGLAS-----QLYIYKXXXXXXXXXXXHTCFYRLCFPPYPSRAEMQKRLNVVTQEHVGCSFG 1413 +L+ R + S + ++ AN L G+ + F EE G GV+REWF ++ I NP+ ALF S D F PN S V+P HL YFRFAG+++ LAL H+ V + F R F++ + G+ ++ +D+ DP + + IL+ D I L LTF E + G+ V L GG +I+V +N+ EYV L+ R +I Q++ F QGF + S +Q F ELE +L I + DW +TEY +GY D I WFW++V E++ E+R +LL F T +P GF + I LP+S TC L P YPS+ ++ RL V H G S+G Sbjct: 588 LLVHRDSIFRSSCEVVSKANCAKLKQGIAVRFHGEEGMGQGVVREWFDILSSEIVNPDYALFTQ-SADGTTFQPNSNSSVNPDHLNYFRFAGQILGLALNHRQLVNIYFTRSFYKHILGIPVNYQDVASIDPEYAKNLQWILDND---ISDLGLELTFSVETDVFGAMEEVPLKPGGASILVTQENKAEYVQLVTELRMTRAIQPQINAFLQGFHMFIPPSLIQ--LFDEYELE----LLLSGMPEIDVNDWLKNTEYTSGYERGDQVIQWFWDVVEELTQEERVLLLQFVTGSSRVPHGGFAHIMGGSGLQNFTIAAVPYTANLLPTSSTCINMLKLPEYPSKEILKDRLLVAL--HCG-SYG 938 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0013233 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0013233 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0013233 ID=g.arboreum_cottongen_reftransV1_0013233; Name=g.arboreum_cottongen_reftransV1_0013233; organism=Gossypium arboreum; type=contig; length=3253bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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