g.arboreum_cottongen_reftransV1_0013233, g.arboreum_cottongen_reftransV1_0013233 (contig) Gossypium arboreum
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0013233 vs. ExPASy TrEMBL
Match: A0A059CGM7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01416 PE=4 SV=1) HSP 1 Score: 1016.53 bits (2627), Expect = 0.000e+0 Identity = 501/797 (62.86%), Postives = 621/797 (77.92%), Query Frame = -2 Query: 334 RLQFFIRMISEGNTIVVQANSEDTVKSLHERIQVMTGIPVIEQRLIYRGKQLQWEQSLADCSIQNDAGLQLVGRMRSTDHPQTWQVMDDMISVICRLCRGETPPSPTKHIKDCLTNFFTIAPKDNNDSGPAHLQIFMASSAPAALVMLYMSPIKKNKMCADDSIRHILTQYRSALPKHLHSYCAPILLEFCKLLRKVVSEDSLYEACRSALGMLLESVGTSRGLMLPE-VKGLIVIQDIFPFVSELADKISKNLESSVDSTSSGEPLSSDVRDFTAFLNPLRSTILERVAFRIPISVKWKKKDNSNPPYGEAVEFLHTIFNDLLGKMENCLIRVEENLAATGSSEGEYLSSEWSQYLAILKELNGISKLYQGAEEQFWMLLRNRKSSLCALIIRFAKRNEDNRWLLEHKDVTDFESRRHLAMMMFPEVKEDYEELHEMLIDRSQLLSESFQYIAHANPESLHAGLFMEFKNEEATGPGVLREWFFLVCQAIFNPENALFVPCSNDRRRFFPNPASRVDPSHLEYFRFAGRVIALALMHKVQVGVVFDRVFFQQLAGMHISLEDIRETDPCLYSSCKKILEMDAEFIDSDALGLTFVREVEELGSRRLVELVAGGKNIVVNSKNRQEYVNLLIRDRFVTSISEQVDHFSQGFGHILSNSRLQKFFFQSLELEDLDWMLYGSESPICIEDWKAHTEYNGYTENDPQINWFWEIVREMSAEQRKVLLFFWTSLKHLPVEGFRGLASQLYIYKXXXXXXXXXXXHTCFYRLCFPPYPSRAEMQKRLNVVTQEHVGCSFGTW 2721 RLQFF+R ++G T+V +ANS DTV+S+HERI ++T IPV+EQRLIYRGKQLQ ++SLA+CSIQNDA L LVGRMRST H + W+++DDMIS++ RLC GET P K I+ ++ + ++ PKD++D+ HLQ+FM+ S PAALVMLYMSPI+ NK A++SIRH L + LPK L S CAPI+LEFC LLR++ S+D LY +CRS+ G +++ + E VK I I++IFPFV ELADK+SK+LE S+ + +S S DV DF FL PLR+ + F+ PIS+ + + E VE L+ +F D+L KM CL R+E+ L+A S E + W QYL ILKELNGISKLY G+EE+FW +L RK +LC L++R+AKR+ D++WLLE KD+ DFESRRHL MMMFPEVK D++E HEMLIDRSQLLSESF YIA+A ESLH G+ MEFKNEEATGPGVLREWF LVCQAIFN +N LFV C NDRRRF+PNPAS V+P HL+YF F+GR+I LALMHKVQVG+V DRVFF QL G ISLEDIR+ DP +Y++CK ILE D E+IDSDALGLTFVREVEELG RR+VEL GGK +VVNSKNR +YV+LLI+ +FVTSIS+QV F+QGFG +LS+ RLQKFFFQSLELED+D ML+GS + I +EDWKAHTEYNGY ND QI+WFW+IVR+MS +Q+K +LFFWTS+K+LPVEGFRGLAS+LYIYKS E HLPSSHTCFYRLCFPPYPS M++RL+++ QEHVGCSFGT+ Sbjct: 6 RLQFFVR--TDGKTLVFRANSSDTVRSVHERIHLITKIPVVEQRLIYRGKQLQCDKSLAECSIQNDACLHLVGRMRSTGHSKAWRIIDDMISLVRRLCEGETVPYALKTIRTKISEYLSMTPKDDDDAATGHLQLFMSFSVPAALVMLYMSPIRDNKEHAEESIRHFLESCITELPKSLRSRCAPIVLEFCNLLRRIASDDPLYLSCRSSFGSMMKVIKVRWVSKHTESVKRAISIKEIFPFVKELADKLSKDLELSLHTIASLGTWS-DVHDFKMFLRPLRTVMSGYKGFKHPISLPMENEHRHVLLCKEEVELLYQVFEDVLKKMGECLFRMEQWLSANVSGEIDIACPAWPQYLTILKELNGISKLYLGSEEEFWTILSMRKRALCMLVVRYAKRSADHKWLLERKDIMDFESRRHLVMMMFPEVKRDFQEQHEMLIDRSQLLSESFDYIANAKAESLHGGILMEFKNEEATGPGVLREWFVLVCQAIFNQQNPLFVACPNDRRRFYPNPASTVEPLHLKYFNFSGRMIGLALMHKVQVGIVLDRVFFLQLGGYSISLEDIRDADPDMYNNCKWILERDPEYIDSDALGLTFVREVEELGLRRVVELCDGGKGMVVNSKNRNDYVDLLIKHKFVTSISQQVSRFAQGFGDMLSDLRLQKFFFQSLELEDIDQMLHGSGNDISVEDWKAHTEYNGYKSNDSQIDWFWKIVRKMSPQQKKNILFFWTSVKYLPVEGFRGLASRLYIYKSMEDISHLPSSHTCFYRLCFPPYPSMTIMEQRLSIIAQEHVGCSFGTY 799
BLAST of g.arboreum_cottongen_reftransV1_0013233 vs. ExPASy TrEMBL
Match: W9QUP9_9ROSA (E3 ubiquitin-protein ligase UPL5 OS=Morus notabilis GN=L484_013654 PE=4 SV=1) HSP 1 Score: 1011.52 bits (2614), Expect = 0.000e+0 Identity = 527/853 (61.78%), Postives = 631/853 (73.97%), Query Frame = -2 Query: 592 MSLFQSAA-----VDQLSNGYDH---RLSSKRKFDDYA--------FSFDEE------DPLVPVRMRKDDHTHQGAYPITAVHHSSKAPASSFPTXX----------XXXXXXXXXXXXXXXXXXXSRLQFFIRMISEGNTIVVQANSEDTVKSLHERIQVMTGIPVIEQRLIYRGKQLQWEQSLADCSIQNDAGLQLVGRMRSTDHPQTWQVMDDMISVICRLCRGETPPSPTKHIKDCLTNFFTIAPKDNNDSGPAHLQIFMASSAPAALVMLYMSPIKKNKMCADDSIRHILTQYRSALPKHLHSYCAPILLEFCKLLRKVVSEDSLYEACRSALGMLLESVGTS---RGLMLPE-VKGLIVIQDIFPFVSELADKISKNLESSVDSTSSGEPLSSDVRDFTAFLNPLRSTILERVAFRIPISVKWKKKDNSNPPYGEAVEFLHTIFNDLLGKMENCLIRVEENLAATGSSEGEYLSSEWSQYLAILKELNGISKLYQGAEEQFWMLLRNRKSSLCALIIRFAKRNEDNRWLLEHKDVTDFESRRHLAMMMFPEVKEDYEELHEMLIDRSQLLSESFQYIAHANPESLHAGLFMEFKNEEATGPGVLREWFFLVCQAIFNPENALFVPCSNDRRRFFPNPASRVDPSHLEYFRFAGRVIALALMHKVQVGVVFDRVFFQQLAGMH-ISLEDIRETDPCLYSSCKKILEMDAEFIDSDALGLTFVREVEELGSRRLVELVAGGKNIVVNSKNRQEYVNLLIRDRFVTSISEQVDHFSQGFGHIL---SNS--------RLQKFFFQSLELEDLDWMLYGSESPICIEDWKAHTEYNGYTENDPQINWFWEI 3006 MSL +SAA V Q S DH RLSSKRK DDY EE LV VRMRKD+ + AV+ SS F S + S+ S S LQFF+RM+SEG +V+QA++ DTVKS+HERIQ +TGIP+ EQRLIYRGKQLQWEQSLA+CSIQNDA LQLVGRMRST+HP WQV+DDMIS+ICRLC+GE + K IK C++ +F++ PK+ NDS +HLQIFM+SSAPAALVMLY+SPIK+NK ++ +++H L R++L K L++ CAPILLEFCKLLR+V ED LY +CR+ALG LLESV +S G LP+ VK LI +Q+IFPFVSEL++++S++L SSV+ST G PL SDVRDF+AFL PL I ++V R ISV + +P YGE +EFLH IF LL +M+ CL+++E++LA G +G+ + WSQYLAILKELN ISKLY+ AEE+FW +LR R+SS CAL++ +A+R +DN+W++ HKDV DFESRRHLAMMMF EVKEDYEELHEMLIDRS LL ESF+YI A+PESLH GLFMEFKNEEATGPGVLREWFFLVCQAIFNP+NALFV C +D RRF+PNPAS VDP HLEYF FAGRVIALALMHKVQVG+VFDR+FFQQLAG ISLEDI + DPCLYSSCKKIL+MDAEFIDSDALGLTF RE+EELG+RR+VEL GGK+IVVNSKNR EYV LLI+ +FV SIS QV F QGF +L S+S RLQ FFQ LEL+DLD ML+GSES I +EDWKAHTEYNGY END QI WFW++ Sbjct: 1 MSLVESAATAVDCVHQRSGAADHQYHRLSSKRKLDDYGGPNFDDYDDDDQEEGDNAIFSDLVSVRMRKDE--------LNAVNSSSDGSPCPFSAGTSQHLDSRVFDAQSASYGTSSSRPKSTRSPSSLQFFVRMLSEGYNLVIQADANDTVKSIHERIQAITGIPLFEQRLIYRGKQLQWEQSLAECSIQNDASLQLVGRMRSTEHPHAWQVIDDMISIICRLCKGEPYSNEPKDIKSCMSEYFSMTPKEENDSATSHLQIFMSSSAPAALVMLYVSPIKENKQHSEGAVKHFLGLIRNSLHKPLYNQCAPILLEFCKLLRRVGYEDPLYVSCRNALGSLLESVASSNSSHGSALPDNVKELIGVQEIFPFVSELSERLSRDLVSSVESTGVG-PLLSDVRDFSAFLLPLNKAITQQVGSRGRISVLLDGRGYKHPLYGEEIEFLHRIFRQLLCRMDQCLLKMEDHLAGKGKGDGDIAHTRWSQYLAILKELNSISKLYEDAEERFWAVLRLRRSSFCALVVNYARRTDDNQWIVNHKDVLDFESRRHLAMMMFAEVKEDYEELHEMLIDRSHLLEESFEYIGRADPESLHGGLFMEFKNEEATGPGVLREWFFLVCQAIFNPQNALFVACPHDCRRFYPNPASVVDPLHLEYFAFAGRVIALALMHKVQVGIVFDRMFFQQLAGNSLISLEDICDADPCLYSSCKKILQMDAEFIDSDALGLTFAREIEELGARRVVELCPGGKSIVVNSKNRDEYVKLLIQHQFVKSISAQVSRFGQGFADMLCKPSDSSLNMFCKFRLQTSFFQGLELQDLDLMLHGSESAISVEDWKAHTEYNGYKENDSQIVWFWKV 844 HSP 2 Score: 127.487 bits (319), Expect = 2.053e-26 Identity = 67/87 (77.01%), Postives = 76/87 (87.36%), Query Frame = -2 Query: 334 IVREMSAEQRKVLLFFWTSLKHLPVEGFRGLASQLYIYKXXXXXXXXXXXHTCFYRLCFPPYPSRAEMQKRLNVVTQEHVGCSFGTW 594 IV EMS EQRK+LLFFWTS+K+LPVEGFRGLAS+LYIY+SSEPH+ LPSSHTCFYRLCFPPY S +Q RL ++TQEH G SFGTW Sbjct: 937 IVEEMSTEQRKILLFFWTSVKYLPVEGFRGLASRLYIYRSSEPHDRLPSSHTCFYRLCFPPYSSMRMLQDRLRIITQEHFGSSFGTW 1023
BLAST of g.arboreum_cottongen_reftransV1_0013233 vs. ExPASy TrEMBL
Match: U5G5J4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s01330g PE=4 SV=1) HSP 1 Score: 994.571 bits (2570), Expect = 0.000e+0 Identity = 535/917 (58.34%), Postives = 647/917 (70.56%), Query Frame = -2 Query: 334 MSLFQSAAVDQL----SNGYDHRLSSKRKFDDYAFSFDEEDP----LVPVRMRKDD-HTHQGAYPITAVHHSSKAPASSFPTXXXXXXX----------XXXXXXXXXXXXXXSRLQFFIRMISEGNTIVVQANSEDTVKSLHERIQVMTGIPVIEQRLIYRGKQLQWEQSLADCSIQNDAGLQLVGRMRSTDHPQTWQVMDDMISVICRLCRGETP----PSPTKHIKDCLTNFFTIAPKDNNDSGPAHLQIFMASSAPAALVMLYMSPIKKNKMCADDSIRHILTQYRSALPKHLHSYCAPILLEFCKLLRKVVSEDSLYEACRSALGMLLESVGTSRGLML---PEVKGLIVIQDIFPFVSELADKISKNLESSVDSTSSGEPLSSDVRDFTAFLNPLRSTILERVAFRIPISVKWKKKDNSNPPYGEAVEFLHTIFNDLLGKMENCLIRVEENLAATGSSEGEYLSSEWSQYLAILKELNGISKLYQGAEEQFWMLLRNRKSSLCALIIRFAKRNEDNRWLLEHKDVTDFESRRHLAMMMFPEVKEDYEELHEMLIDRSQLLSESFQYIAHANPESLHAGLFMEFKNEEATGPGVLREWFFLVCQAIFNPENALFVPCSNDRRRFFPNPASRVDPSHLEYFRFAGRVIALALMHKVQVGVVFDRVFFQQLAGMHISLEDIRETDPCLYSSCKKILEMDAEFIDSDALGLTFVREVEELGSRRLVELVAGGKNIVVNSKNRQEYVNLLIRDRFVTSISEQVDHFSQGFGHILSNSRLQKFFFQSLELEDLDWMLYGSESPICIEDWKAHTEYNGYTENDPQINWFWEIVREMSAEQRKVLLFFWTSLKHLPVEGFRGLASQLYIYKXXXXXXXXXXXHTCFYRLCFPPYPSRAEMQKRLNVVTQEHVGCSFGTW 3006 MSL QS D L S+ DHR+SSKRK DD D+ D L+ VRMRKDD + G S + + T + D+ + S S SRLQFFIRMIS+ +V+ ANS D+VKSLHE+I+ MTGIPVIEQRLIY GKQLQ+E L+D SI+ND+ L LVGRMRST HP+T Q+++DM+S ICR+C+ P P +KHIK+ + FF++ PKD+N+ HL +F+++SAPAALV LY+S IK NK CA+ +IRH L R +LPK+LH C PI++EFC LLRKV S+D LY CRS LG LLE+ G + G E KG +V+Q+IFPFVSEL K+SK+L SV S P + V+DF+AFL PL S I E+ F PIS+ KK+ + P Y + +E LH IF DLL ME CL +++++ + EGE + WSQYL ILKELN I+KLY+GAEE+FW +LR RK+SLC LI+R+AKR +D++WLL+HKDVTDF+SRRHLAMMMFPE+KEDYE+LHEMLIDRSQLL+ESF+YI HA ++LH GLFMEFKNEEATGPGVLREWFFLV QAIF+P+NALFV C +DRRRF+PNP DIR+ DPCLYSSCK+IL+MD EFIDSDALGLTFVREVEELGS ++VEL GGK IVVNSKNR++YVNLLI+ FVTSIS+ V F++GF IL N QK FF+SLELEDLDWMLYGSES IC+EDWKAHTEY+ Y E DPQI+WFWEIV MSA+QRKVLLFFWTS+K+LPVEGFRGLASQLYIYKS+EPH+HLPSSHTCFYRLCFPPYPS A MQ RL V+TQEHVGCSFGTW Sbjct: 1 MSLPQSPTADSLHQQRSSTVDHRVSSKRKLDD----VDDNDAVFSDLISVRMRKDDTESSTGNNQEQQQQPPSISSTNQLSTRVSDASTSSSSTNFPSSAMGTTTPSPLRRSQSRLQFFIRMISDATHVVINANSSDSVKSLHEQIRAMTGIPVIEQRLIYLGKQLQYENKLSDYSIENDSILHLVGRMRSTRHPRTCQLINDMVSYICRICKSILPCGVHPYTSKHIKELMNEFFSLTPKDDNEDASGHLNVFLSNSAPAALVALYVSSIKGNKECAEGAIRHFLNSCRISLPKNLHLQCVPIVMEFCNLLRKVGSDDPLYVVCRSCLGSLLENGGGTCGWRYHGGEEGKG-VVMQEIFPFVSELGSKLSKDLTGSV--AESMGPSEAVVKDFSAFLIPLHSVISEQRGFGSPISMPLKKRAFNCPLYAKEIEQLHVIFIDLLDIMEKCLEKMQDSSNLKTNGEGELNHTGWSQYLFILKELNNIAKLYKGAEEKFWTVLRLRKASLCVLIVRYAKRTDDHQWLLQHKDVTDFDSRRHLAMMMFPELKEDYEDLHEMLIDRSQLLAESFEYIVHAESDTLHVGLFMEFKNEEATGPGVLREWFFLVTQAIFDPQNALFVACPSDRRRFYPNP-------------------------------------------------DIRDADPCLYSSCKQILQMDPEFIDSDALGLTFVREVEELGSIKVVELCPGGKGIVVNSKNREKYVNLLIQHHFVTSISDPVSRFARGFSDIL-NPGEQKLFFRSLELEDLDWMLYGSESAICVEDWKAHTEYSSYKETDPQISWFWEIVGRMSADQRKVLLFFWTSVKYLPVEGFRGLASQLYIYKSTEPHDHLPSSHTCFYRLCFPPYPSMAIMQDRLRVITQEHVGCSFGTW 860
BLAST of g.arboreum_cottongen_reftransV1_0013233 vs. ExPASy TrEMBL
Match: G7JKJ3_MEDTR (E3 ubiquitin-protein ligase UPL5-like protein OS=Medicago truncatula GN=MTR_4g133120 PE=4 SV=2) HSP 1 Score: 991.104 bits (2561), Expect = 0.000e+0 Identity = 507/881 (57.55%), Postives = 636/881 (72.19%), Query Frame = -2 Query: 334 HRLSSKRKFDDYAFSFDEEDPLVPVRMRKDDHTHQGAYPITAVHHSSKAPASSFPTXXXXXXXXXXXXXXXXXXXXXSRLQFFIRMISEGNTIVVQANSEDTVKSLHERIQVMTGIPVIEQRLIYRGKQLQWEQSLADCSIQNDAGLQLVGRMRSTDHPQTWQVMDDMISVICRLCRGETPPSPTKHIKDCLTNFFTIA----PKDNNDSGPAHLQIFMASSAPAALVMLYMSPIKKNKMCADDSIRHILTQYRSALPKHLHSYCAPILLEFCKLLRKVVSEDSLYEACRSALGMLLESVGTSRGLMLPEV-KGLIVIQDIFPFVSELADKISKNLESSVDSTSSGEPLSSDVRDFTAFLNPLRSTILERVAFRIPISVKWKKKDNSNPPYGEAVEFLHTIFNDLLGKMENCLIRVEENLAATGSS-EGEYLSSEWSQYLAILKELNGISKLYQGAEEQFWMLLRNRKSSLCALIIRFAKRNEDNRWLLEHKDVTDFESRRHLAMMMFPEVKEDYEELHEMLIDRSQLLSESFQYIAHANPESLHAGLFMEFKNEEATGPGVLREWFFLVCQAIFNPENALFVPCSNDRRRFFPNPASRVDPS-HLEYFRFAGRVIALALMHKVQVGVVFDRVFFQQLAGMHISLEDIRETDPCLYSSCKKILEMDAEFIDSDALGLTFVREVEELGSRRLVELVAGGKNIVVNSKNRQEYVNLLIRDRFVTSISEQVDHFSQGFGHILSNSRLQKFFFQSLELEDLDWMLYGSESPICIEDWKAHTEYNGYTENDPQINWFWEIVREMSAEQRKVLLFFWTSLKHLPVEGFRGLASQLYIYKXXXXXXXXXXXHTCFYRLCFPPYPSRAEMQKRLNVVTQEHVGCSFGTW 2955 +R SSKRK D+ + +D LV VRMRKD+ T T +H S S P + FFIRM+S+G +V+ A E+TVKS+HERI+ M GIP+ EQRLI+ GKQLQWEQ+L +C IQNDA L LVGRMRST+HPQ WQV++DM+S++ LC G P K IK LT + +A PK + DS ++ QIFM SSA + LV LY+SP NK C+D I+H L +++L K H+ A + LEFCKLL +V + D LY CRS+LG LE+ S E KGL+++QD+FPFV ELAD + +NL+ S++S S PL + V DF AFL P+R+ I ++ A R ++ K+ N N E +E+L +++ LL K++ CL ++++ E Y S YL+ILKEL+ ISKLY GA E+ +L RKS +C +I+++AKR ++++W+LE+K+VT+FE+RRHLAMM+FPEVKEDYEELHEMLIDRSQLL+ESF+YIA A+PESL AGLFMEFKNEEATGPGVLREWF LVCQA+FN E+ALFV C DR RF PN AS+V + HLEYF F GRVIALALMHKVQVG+VFDRVFF QLAG I+LEDIR+ DP LY SCK+IL+MD++FIDSDALGLTF+REVEELG R+ ++L GGKNIVVNSKNR +YV+LLI+DRFVTSI+EQV HF++GF ILS+S+LQ+FFFQSLE EDLDWML GSE I +EDWKAHTEYNGYT+ D QI+WFWEIV M+AE++KVLLFFWTS+K+LPVEGFRGL S+L+IYKS E + LPSSHTCFYRLCFP Y S MQ RL V+TQEH+G SFGTW Sbjct: 17 NRSSSKRKLDEDDENNALDDDLVYVRMRKDETTK------TTLHSSWTGGGGGSSGGDGGGAFSKKKSP----------IHFFIRMMSKGYNVVIHAYPEETVKSIHERIEEMKGIPLFEQRLIFNGKQLQWEQTLVECGIQNDANLHLVGRMRSTEHPQAWQVVNDMVSIVYDLCHGVNLPDAVKSIKSLLTTYINLALAPKPKLDADSATSYFQIFMNSSAISVLVTLYVSPYTGNKACSDTCIKHFLNGCKTSLSKTFHTQAARVALEFCKLLSRVGTNDPLYLFCRSSLGGFLEAAEISLAASEDENHKGLVLVQDLFPFVRELADSLLRNLDLSLESPSLANPLLNSVEDFQAFLVPVRTGIEQQQALRGCVAYHQKQDKNKNGLVAEEIEYLRLLYDQLLSKIDTCLQKMDKRFTDKEMVFEENYFYPACSLYLSILKELHKISKLYDGATEELCHVLMRRKSVMCLIIVKYAKRADEHQWILEYKNVTNFEARRHLAMMIFPEVKEDYEELHEMLIDRSQLLTESFEYIARADPESLRAGLFMEFKNEEATGPGVLREWFLLVCQALFNQEHALFVACPKDRTRFLPNSASKVQHNLHLEYFSFCGRVIALALMHKVQVGIVFDRVFFLQLAGKPITLEDIRDADPDLYRSCKQILDMDSDFIDSDALGLTFIREVEELGQRKAIQLCPGGKNIVVNSKNRVKYVDLLIKDRFVTSIAEQVSHFAKGFAEILSSSKLQQFFFQSLESEDLDWMLRGSEDAISVEDWKAHTEYNGYTDTDIQISWFWEIVGRMTAEEKKVLLFFWTSVKYLPVEGFRGLGSRLHIYKSHESGDRLPSSHTCFYRLCFPAYSSMPVMQARLKVITQEHIGSSFGTW 881
BLAST of g.arboreum_cottongen_reftransV1_0013233 vs. ExPASy TrEMBL
Match: A0A0D2QID4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G183200 PE=4 SV=1) HSP 1 Score: 970.304 bits (2507), Expect = 0.000e+0 Identity = 488/622 (78.46%), Postives = 547/622 (87.94%), Query Frame = -2 Query: 334 LPKHLHSYCAPILLEFCKLLRKVVSEDSLYEACRSALGMLLESVGTSRGLMLPEVKGLIVIQDIFPFVSELADKISKNLESSVDSTSSGEPLSSDVRDFTAFLNPLRSTILERVAFRIPISVKWKKKDNSNPPYGEAVEFLHTIFNDLLGKMENCLIRVEENLAATGSSEGEYLSSEWSQYLAILKELNGISKLYQGAEEQFWMLLRNRKSSLCALIIRFAKRNEDNRWLLEHKDVTDFESRRHLAMMMFPEVKEDYEELHEMLIDRSQLLSESFQYIAHANPESLHAGLFMEFKNEEATGPGVLREWFFLVCQAIFNPENALFVPCSNDRRRFFPNPASRVDPSHLEYFRFAGRVIALALMHKVQVGVVFDRVFFQQLAGMHISLEDIRETDPCLYSSCKKILEMDAEFIDSDALGLTFVREVEELGSRRLVELVAGGKNIVVNSKNRQEYVNLLIRDRFVTSISEQVDHFSQGFGHILSNSRLQKFFFQSLELEDLDWMLYGSESPICIEDWKAHTEYNGYTENDPQINWFWEIVREMSAEQRKVLLFFWTSLKHLPVEGFRGLASQLYIYKXXXXXXXXXXXHTCFYRLCFPPYPSRAEMQKRLNVVTQEHVGCSFGTW 2199 LPK LHSYCAPI LEFCKLLRKVV+EDSLY CRS L +LLESV +S GLM +VKG V Q+IFPF +EL +S+ L+SS+ ST+S P SS R+F AFLNPLRS I+E+V RIPIS+ + +P Y + + LH IF+ LL KM+NCLIRVEE L A GS+ E++ S WSQYL+ILKELNGISKLYQGAEE+FWM+LRN K+SLCALIIRF++R++DN+WLLEHKDVTDFESRRHL MMMFPEVK+DYEELHEMLIDRSQLL+ESF+YIA +PESLHAGLFMEFKNEEATGPGVLREWF LVCQAIFNPENALF+PC+ DRRRFFPNPASR+DP HLEYF FAGRVIALALMHKVQVG+VFDRVFF QLAGM ISLEDIRE DPCLYSSCKKILEMDAEFIDSDALGLTFVREVEELGSR +VEL AGGK+IVVNS+NRQEYVNLLIRDRF TS SEQVD+FSQGFGHILSNSRLQK FFQSLELEDLD MLYGSESPIC++DWKAHTEYNGY E+DPQI WFWEIVREMSA+QRK LLFFWTS+K+LPVEGFR LAS+LYIYK+SEP ++LPSSHTCFYR+CFPPYPS EM+KRLNV+TQEH+ CSFGTW Sbjct: 83 LPKELHSYCAPIALEFCKLLRKVVNEDSLYAWCRSTLSVLLESVSSSMGLMRTKVKGFTV-QEIFPFFNELVSHLSEELDSSLYSTTSEGPSSSHFREFVAFLNPLRSAIIEQVESRIPISIDY------HPLYRDEIRNLHLIFDKLLHKMKNCLIRVEEILVARGSNGDEFVHSGWSQYLSILKELNGISKLYQGAEEKFWMVLRNMKASLCALIIRFSRRDDDNQWLLEHKDVTDFESRRHLVMMMFPEVKDDYEELHEMLIDRSQLLAESFEYIARVDPESLHAGLFMEFKNEEATGPGVLREWFLLVCQAIFNPENALFLPCAYDRRRFFPNPASRMDPLHLEYFSFAGRVIALALMHKVQVGIVFDRVFFLQLAGMDISLEDIREADPCLYSSCKKILEMDAEFIDSDALGLTFVREVEELGSRTVVELCAGGKSIVVNSRNRQEYVNLLIRDRFSTSTSEQVDYFSQGFGHILSNSRLQKIFFQSLELEDLDRMLYGSESPICVDDWKAHTEYNGYKESDPQITWFWEIVREMSADQRKQLLFFWTSVKYLPVEGFRCLASRLYIYKTSEPCDYLPSSHTCFYRICFPPYPSMGEMRKRLNVITQEHIRCSFGTW 697 HSP 2 Score: 92.8189 bits (229), Expect = 5.863e-16 Identity = 50/79 (63.29%), Postives = 55/79 (69.62%), Query Frame = -3 Query: 2286 PDSNSLAVCGRRTTHKPGRSWTT*SPLFAAFAEEKHPLPRPNTSKTA*PTFLRLLQRTIMTPALLTCRYLWHLRLLPLW 2522 P SNS AVCG TT KPG+SWTT SPLF FAEEK +P+P SK A +LL RT LLTCRYLW+LRLLPLW Sbjct: 2 PVSNSSAVCGPLTTRKPGKSWTTWSPLFPPFAEEKRSIPQPKASKVAWTNSSQLLTRTTARLLLLTCRYLWYLRLLPLW 80
BLAST of g.arboreum_cottongen_reftransV1_0013233 vs. ExPASy Swiss-Prot
Match: RSP5_ASPCL (Probable E3 ubiquitin-protein ligase hulA OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=hulA PE=3 SV=2) HSP 1 Score: 193.356 bits (490), Expect = 1.668e-49 Identity = 119/357 (33.33%), Postives = 188/357 (52.66%), Query Frame = -2 Query: 352 IDRSQLLSESFQYIAHANPESLHAGLFMEFKNEEATGPGVL-REWFFLVCQAIFNPENALFVPCSNDRRRFFPNPASRVDPSHLEYFRFAGRVIALALMHKVQVGVVFDRVFFQQLAGMHISLEDIRETDPCLYSSCKKILEMDAEFIDSDALGLTFVREVEELGSRRLVELVAGGKNIVVNSKNRQEYVNLLIRDRFVTSISEQVDHFSQGFGHILSNSRLQKFFFQSLELEDLDWMLYGSESPICIEDWKAHTEYNGYTENDPQINWFWEIVREMSAEQRKVLLFFWTSLKHLPVEGFRGL----ASQLYIYKXXXXXXXXXXXHTCFYRLCFPPYPSRAEMQKRLNVVTQEHVG 1407 + R+ + +S+ I + L L ++F E+ G L RE+FFL+ +FNP LF ++D NP S V+P HL YF+F GRV+ LA+ H+ + F F++ + +SL+D+ D L+ + L+ D E + L LTF + E+ G RR ++L GG++I V ++N+ EYV L+ + V + EQ + F GF ++ + F + LEL L G + I ++DWK HT+Y GY E+D I FW++VR AEQ+ LL F T +PV GF+ L + + + S LP SHTCF RL PPY + ++ ++++ +E +G Sbjct: 465 VRRNNIFEDSYAEIMRQSASDLKKRLMIKFDGEDGLDYGGLSREFFFLLSHEMFNPFYCLFEYSAHDNYTLQINPHSGVNPEHLNYFKFIGRVVGLAIFHRRFLDSFFIGAFYKMMLRKKVSLQDMEGVDEDLHRNLTWTLDNDIEGV----LELTFAVDDEKFGERRTIDLKPGGRDIPVTNENKGEYVELVTEWKIVKRVEEQFNAFMSGFNELIPADLVNVFDERELEL------LIGGIADIDVDDWKKHTDYRGYQESDDVIQNFWKVVRTWDAEQKSRLLQFTTGTSRIPVNGFKDLQGSDGPRRFTIEKSGDPVALPKSHTCFNRLDLPPYKTYETLEHKMSIAVEETLG 811
BLAST of g.arboreum_cottongen_reftransV1_0013233 vs. ExPASy Swiss-Prot
Match: RSP5_ASPNC (Probable E3 ubiquitin-protein ligase hulA OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=hulA PE=3 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 6.406e-49 Identity = 121/357 (33.89%), Postives = 186/357 (52.10%), Query Frame = -2 Query: 352 IDRSQLLSESFQYIAHANPESLHAGLFMEFKNEEATGPGVL-REWFFLVCQAIFNPENALFVPCSNDRRRFFPNPASRVDPSHLEYFRFAGRVIALALMHKVQVGVVFDRVFFQQLAGMHISLEDIRETDPCLYSSCKKILEMDAEFIDSDALGLTFVREVEELGSRRLVELVAGGKNIVVNSKNRQEYVNLLIRDRFVTSISEQVDHFSQGFGHILSNSRLQKFFFQSLELEDLDWMLYGSESPICIEDWKAHTEYNGYTENDPQINWFWEIVREMSAEQRKVLLFFWTSLKHLPVEGFRGL----ASQLYIYKXXXXXXXXXXXHTCFYRLCFPPYPSRAEMQKRLNVVTQEHVG 1407 + R+ + +S+ I + L L ++F E+ G L RE+FFL+ +FNP LF ++D NP S V+P HL YF+F GRV+ LA+ H+ + F F++ + +SL+D+ D L+ + LE D E I + LTF + E+ G R ++L GG++I V ++N+ EYV L+ + V + EQ + F GF ++ + F + LEL L G + I ++DWK HT+Y GY E D I FW+IVR AEQ+ LL F T +PV GF+ L + + + S LP SHTCF RL PPY + ++ +L++ +E +G Sbjct: 471 VRRNNIFEDSYAEIMRQSASDLKKRLMIKFDGEDGLDYGGLSREFFFLLSHEMFNPFYCLFEYSAHDNYTLQINPHSGVNPEHLNYFKFIGRVVGLAIFHRRFLDSFFIGAFYKMMLRKKVSLQDMEGVDEDLHRNLAWTLENDIEGI----IELTFSVDDEKFGERTTIDLKPGGRDIPVTNENKGEYVELVTEWKIVKRVEEQFNAFMSGFNELIPADLVNVFDERELEL------LIGGIADIDVDDWKKHTDYRGYQEQDEVIQNFWKIVRTWDAEQKSRLLQFTTGTSRIPVNGFKDLQGSDGPRRFTIEKSGDPIALPKSHTCFNRLDLPPYKTHDVLEHKLSIAVEETLG 817
BLAST of g.arboreum_cottongen_reftransV1_0013233 vs. ExPASy Swiss-Prot
Match: TOM1_NEUCR (E3 ubiquitin-protein ligase TOM1-like OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=B11B22.010 PE=3 SV=4) HSP 1 Score: 193.356 bits (490), Expect = 2.347e-48 Identity = 135/413 (32.69%), Postives = 209/413 (50.61%), Query Frame = -2 Query: 409 KLYQGAEEQFWMLLRNRKSSLCALIIRF-AKRNEDNRWLLEHKDVTDFESRRHLAMMMFPEVKEDYEELHEMLIDRSQLLSESFQYIAHANPESLHAG-LFMEFKNEEAT-GPGVLREWFFLVCQAIFNPENALFVPCSNDRRRFFPNPASRVDPSHLEYFRFAGRVIALALMHKVQVGVVFDRVFFQQLAGMHISLEDIRETDPCLYSSCKKILEMDAEFIDSDALGLTFVREVEELGSRRLVELVAGGKNIVVNSKNRQEYVNLLIRDRFVTSISEQVDHFSQGFGHILSNSRLQKFFFQSLELEDLDWMLYGSESPICIEDWKAHTEYNGYTENDPQINWFWEIVREMSAEQRKVLLFFWTSLKHLPVEGFRGL-----ASQLYIYKXXXXXXXXXXXHTCFYRLCFPPY 1623 KL G F +L++N K ++ F KRN NR + + ++ RH FP + ++ + R + +SF+ + + + L G L + F+ EE GV REWF ++ + +F+P LFVP S+DR F PN S ++ HL +F+F GR+I AL + F R ++++ G +S++D+ DP Y S +LE D +D + TF E + G ++V+L+ G+NI V +N+ EYV L++ + +TS+ +Q+ F GF I+ + F Q LEL L I I+DWKA+TEY+ Y+ PQI WFW VR E+ LL F T +P+ GF+ L S+ I++ + LPSSHTCF +L P Y Sbjct: 3676 KLMSGT---FSLLVKNPK------VLEFDNKRNYFNRSVH-----SKYQQTRH----SFPPL--------QLQVRREHVFHDSFRSLYYKKADELKFGKLNIRFQGEEGVDAGGVTREWFQVLSRQMFDPNYVLFVPVSSDRTTFHPNKLSPINDEHLPFFKFIGRIIGKALYEGRLLECYFSRAVYKRILGKPVSVKDMESFDPDYYKSLVWMLENDI----TDIITETFSVEDDVFGEVKVVDLIENGRNIPVTEENKHEYVRLIVEHKLITSVKDQMKAFLTGFHEIIPEELIAIFNEQELEL------LISGLPDIDIDDWKANTEYHNYSAGAPQIQWFWRAVRSFDKEELAKLLQFVTGTSKVPLNGFKELEGMNGVSRFNIHRDYGSKDRLPSSHTCFNQLDLPEY 4052
BLAST of g.arboreum_cottongen_reftransV1_0013233 vs. ExPASy Swiss-Prot
Match: RSP5_YEAST (E3 ubiquitin-protein ligase RSP5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RSP5 PE=1 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 2.755e-48 Identity = 120/357 (33.61%), Postives = 178/357 (49.86%), Query Frame = -2 Query: 352 IDRSQLLSESFQYIAHANPESLHAGLFMEFKNEEATG-PGVLREWFFLVCQAIFNPENALFVPCSNDRRRFFPNPASRVDPSHLEYFRFAGRVIALALMHKVQVGVVFDRVFFQQLAGMHISLEDIRETDPCLYSSCKKILEMDAEFIDSDALGLTFVREVEELGSRRLVELVAGGKNIVVNSKNRQEYVNLLIRDRFVTSISEQVDHFSQGFGHILSNSRLQKFFFQSLELEDLDWMLYGSESPICIEDWKAHTEYNGYTENDPQINWFWEIVREMSAEQRKVLLFFWTSLKHLPVEGFRGL----ASQLYIYKXXXXXXXXXXXHTCFYRLCFPPYPSRAEMQKRLNVVTQEHVG 1407 + R + +++Q I PE L L ++F EE GV RE+FFL+ +FNP LF + D NP S ++P HL YF+F GRV+ L + H+ + F ++ + + L+D+ D +Y+S +LE + + L LTF + E G V+L G+NI V N++EYV L + R V + EQ F GF ++ + F + LEL L G + I IEDWK HT+Y GY E+D I WFW+ V E EQR LL F T +PV GF+ L + + + + + LP SHTCF R+ P Y M+++L + +E +G Sbjct: 459 VRRKNIFEDAYQEIMRQTPEDLKKRLMIKFDGEEGLDYGGVSREFFFLLSHEMFNPFYCLFEYSAYDNYTIQINPNSGINPEHLNYFKFIGRVVGLGVFHRRFLDAFFVGALYKMMLRKKVVLQDMEGVDAEVYNSLNWMLENSIDGV----LDLTFSADDERFGEVVTVDLKPDGRNIEVTDGNKKEYVELYTQWRIVDRVQEQFKAFMDGFNELIPEDLVTVFDERELEL------LIGGIAEIDIEDWKKHTDYRGYQESDEVIQWFWKCVSEWDNEQRARLLQFTTGTSRIPVNGFKDLQGSDGPRRFTIEKAGEVQQLPKSHTCFNRVDLPQYVDYDSMKQKLTLAVEETIG 805
BLAST of g.arboreum_cottongen_reftransV1_0013233 vs. ExPASy Swiss-Prot
Match: WWP2_HUMAN (NEDD4-like E3 ubiquitin-protein ligase WWP2 OS=Homo sapiens GN=WWP2 PE=1 SV=2) HSP 1 Score: 189.504 bits (480), Expect = 4.012e-48 Identity = 128/357 (35.85%), Postives = 180/357 (50.42%), Query Frame = -2 Query: 352 IDRSQLLSESFQYIAHANPESLHAGLFMEFKNEEATG-PGVLREWFFLVCQAIFNPENALFVPCSNDRRRFFPNPASRVDPSHLEYFRFAGRVIALALMHKVQVGVVFDRVFFQQLAGMHISLEDIRETDPCLYSSCKKILEMDAEFIDSDALGLTFVREVEELGSRRLVELVAGGKNIVVNSKNRQEYVNLLIRDRFVTSISEQVDHFSQGFGHILSNSRLQKFFFQSLELEDLDWMLYGSESPICIEDWKAHTEYNGYTENDPQINWFWEIVREMSAEQRKVLLFFWTSLKHLPVEGFRGL----ASQLYIYKXXXXXXXXXXXHTCFYRLCFPPYPSRAEMQKRLNVVTQEHVG 1407 + R L +SFQ I + P L L++ + EE G+ REWFFL+ + NP LF + NPAS ++P HL YFRF GR IA+AL H + F F++++ +L+D+ DP Y+S I E + E L L F++++E LG EL GG++I V +N++EY+ LL RF + EQ F GF + L+ F + LEL ML G + I + DW+ T Y YT+N QI WFW++V+EM E+R LL F T LPV GF L Q + LP SHTCF RL PPY S +++++L +E G Sbjct: 519 VSRQTLFEDSFQQIMNMKPYDLRRRLYIIMRGEEGLDYGGIAREWFFLLSHEVLNPMYCLFEYAGKNNYCLQINPASSINPDHLTYFRFIGRFIAMALYHGKFIDTGFTLPFYKRMLNKRPTLKDLESIDPEFYNSIVWIKENNLEEC---GLELYFIQDMEILGKVTTHELKEGGESIRVTEENKEEYIMLLTDWRFTRGVEEQTKAFLDGFNEVAPLEWLRYFDEKELEL-----MLCGMQE-IDMSDWQKSTIYRHYTKNSKQIQWFWQVVKEMDNEKRIRLLQFVTGTCRLPVGGFAELIGSNGPQKFCIDKVGKETWLPRSHTCFNRLDLPPYKSYEQLREKLLYAIEETEG 866 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0013233 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0013233 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0013233 ID=g.arboreum_cottongen_reftransV1_0013233; Name=g.arboreum_cottongen_reftransV1_0013233; organism=Gossypium arboreum; type=contig; length=3253bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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