g.arboreum_cottongen_reftransV1_0000159, g.arboreum_cottongen_reftransV1_0000159 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0000159 vs. ExPASy TrEMBL
Match: A0A067E1P9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g006089mg PE=4 SV=1) HSP 1 Score: 206.838 bits (525), Expect = 9.528e-61 Identity = 99/143 (69.23%), Postives = 126/143 (88.11%), Query Frame = 2 Query: 2 FEALRRKLSQMEDAKESHSEIFKRANLKAGNIMFTKGVRTNGKKRIGVVPGVEIGDIFFFRMELILIGLHSQSMAGIDFMPMKADIEGERVAISIVSSGGYEDDAEDPDVLVYTGQGGNASADKE-ASDQKLVRGNLALERSL 427 F+ALRR++SQ+EDAKE+ + + +RA+LKA NI+ +KGVRTN +KR+GVVPGVEIGDIFFFRME+ LIGLHSQSMAGID+M ++D++ E VA+SI+SSGGY+DDAED D+L+Y+GQGGNA+ E A+DQKL RGNLALERSL Sbjct: 154 FDALRRRISQIEDAKETSTGLIRRADLKASNILMSKGVRTNMRKRLGVVPGVEIGDIFFFRMEMCLIGLHSQSMAGIDYMITRSDLDEEPVAVSIISSGGYDDDAEDSDILIYSGQGGNANRKGEQAADQKLERGNLALERSL 296
BLAST of g.arboreum_cottongen_reftransV1_0000159 vs. ExPASy TrEMBL
Match: B9GXL1_POPTR (Histone-lysine N-methyltransferase OS=Populus trichocarpa GN=POPTR_0003s18740g PE=4 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 2.388e-60 Identity = 100/142 (70.42%), Postives = 122/142 (85.92%), Query Frame = 2 Query: 2 FEALRRKLSQMEDAKESHSEIFKRANLKAGNIMFTKGVRTNGKKRIGVVPGVEIGDIFFFRMELILIGLHSQSMAGIDFMPMKADIEGERVAISIVSSGGYEDDAEDPDVLVYTGQGGNASADKEASDQKLVRGNLALERSL 427 F+ALRR+LSQ+EDAKES I +RA+LKAGNI+ TK VRTN +KRIG VPGVEIGDIFFFR+E+ L+GLH+ SMAGID+M ++ D+E E +A+SIVSSG YED+AED DVL+Y+GQGG A+ DK A+DQKL RGNLALERSL Sbjct: 143 FDALRRRLSQLEDAKESPVGIIRRADLKAGNILMTKQVRTNMRKRIGAVPGVEIGDIFFFRIEMCLLGLHAPSMAGIDYMSLRNDLEEEPLAVSIVSSGYYEDNAEDKDVLIYSGQGGAANKDKGATDQKLERGNLALERSL 284
BLAST of g.arboreum_cottongen_reftransV1_0000159 vs. ExPASy TrEMBL
Match: M5X7G2_PRUPE (Histone-lysine N-methyltransferase OS=Prunus persica GN=PRUPE_ppa002185mg PE=4 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 8.682e-59 Identity = 97/143 (67.83%), Postives = 120/143 (83.92%), Query Frame = 2 Query: 2 FEALRRKLSQMEDAKESHSEIFKRANLKAGNIMFTKGVRTNGKKRIGVVPGVEIGDIFFFRMELILIGLHSQSMAGIDFMPMKADIEGERVAISIVSSGGYEDDAEDPDVLVYTGQGG-NASADKEASDQKLVRGNLALERSL 427 F+ALRR++ Q+EDAKES + I KRA+LKAGNI+ TK VRTN ++RIGVVPGVEIGD+F+FRME+ +GLH+ SMAGID+M K D E + VA+SIVSSGGY+DD ED DVL+Y+GQGG N + DK+ +DQKL RGNLALERSL Sbjct: 193 FDALRRRICQIEDAKESKNGIIKRADLKAGNILMTKKVRTNMRRRIGVVPGVEIGDVFYFRMEMCAVGLHAPSMAGIDYMTGKGDAEKDPVALSIVSSGGYDDDTEDSDVLIYSGQGGNNNNKDKQVADQKLERGNLALERSL 335
BLAST of g.arboreum_cottongen_reftransV1_0000159 vs. ExPASy TrEMBL
Match: V4L9Q1_EUTSA (Histone-lysine N-methyltransferase OS=Eutrema salsugineum GN=EUTSA_v10015751mg PE=4 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 1.085e-57 Identity = 95/142 (66.90%), Postives = 116/142 (81.69%), Query Frame = 2 Query: 2 FEALRRKLSQMEDAKESHSEIFKRANLKAGNIMFTKGVRTNGKKRIGVVPGVEIGDIFFFRMELILIGLHSQSMAGIDFMPMKADIEGERVAISIVSSGGYEDDAEDPDVLVYTGQGGNASADKEASDQKLVRGNLALERSL 427 F+ALRR+ SQ+EDAKE+ S I KR +LKAG+I ++GVRTN KKR VVPGVEIGDIFFFR E+ L+GLHS SMAGID++ + + E E +A SIVSSG +++D +PDVL+YTGQGGNA DKEASDQKL RGNLALE+SL Sbjct: 171 FDALRRRFSQLEDAKEASSGIIKRPDLKAGSICMSRGVRTNTKKRTCVVPGVEIGDIFFFRFEMCLVGLHSPSMAGIDYLVVNGETEEEPIATSIVSSGYHDNDKANPDVLIYTGQGGNADKDKEASDQKLERGNLALEKSL 312
BLAST of g.arboreum_cottongen_reftransV1_0000159 vs. ExPASy TrEMBL
Match: R0FL02_9BRAS (Histone-lysine N-methyltransferase OS=Capsella rubella GN=CARUB_v10003306mg PE=4 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 1.736e-57 Identity = 93/142 (65.49%), Postives = 117/142 (82.39%), Query Frame = 2 Query: 2 FEALRRKLSQMEDAKESHSEIFKRANLKAGNIMFTKGVRTNGKKRIGVVPGVEIGDIFFFRMELILIGLHSQSMAGIDFMPMKADIEGERVAISIVSSGGYEDDAEDPDVLVYTGQGGNASADKEASDQKLVRGNLALERSL 427 F+ALRR+ SQ+EDAKE+ S I KR +LK+G+ ++GVRTN KKR G+VPGVEIGDIFFFR E+ L+GLHS SMAGID++ +K + E E +A SIVSSG Y++D +PDVL+YTGQGGNA DK++SDQKL RGNLALE+SL Sbjct: 159 FDALRRRFSQLEDAKEAVSGIIKRGDLKSGSTCMSRGVRTNTKKRPGIVPGVEIGDIFFFRFEMCLVGLHSPSMAGIDYLVVKGETEEEPIATSIVSSGYYDNDEGNPDVLIYTGQGGNADKDKQSSDQKLERGNLALEKSL 300
BLAST of g.arboreum_cottongen_reftransV1_0000159 vs. ExPASy TrEMBL
Match: C0SVN4_ARATH (Putative uncharacterized protein At5g04940 (Fragment) OS=Arabidopsis thaliana GN=At5g04940 PE=2 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 5.959e-56 Identity = 91/142 (64.08%), Postives = 116/142 (81.69%), Query Frame = 2 Query: 2 FEALRRKLSQMEDAKESHSEIFKRANLKAGNIMFTKGVRTNGKKRIGVVPGVEIGDIFFFRMELILIGLHSQSMAGIDFMPMKADIEGERVAISIVSSGGYEDDAEDPDVLVYTGQGGNASADKEASDQKLVRGNLALERSL 427 F+ALRR+ +Q+EDAKE+ S I KR +LK+G+ +GVRTN KKR G+VPGVEIGD+FFFR E+ L+GLHS SMAGID++ +K + E E +A SIVSSG Y++D +PDVL+YTGQGGNA DK++SDQKL RGNLALE+SL Sbjct: 165 FDALRRRFAQLEDAKEAVSGIIKRPDLKSGSTCMGRGVRTNTKKRPGIVPGVEIGDVFFFRFEMCLVGLHSPSMAGIDYLVVKGETEEEPIATSIVSSGYYDNDEGNPDVLIYTGQGGNADKDKQSSDQKLERGNLALEKSL 306
BLAST of g.arboreum_cottongen_reftransV1_0000159 vs. ExPASy TrEMBL
Match: A0A059A874_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J00094 PE=4 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 8.211e-56 Identity = 92/143 (64.34%), Postives = 117/143 (81.82%), Query Frame = 2 Query: 2 FEALRRKLSQMEDAKESHSEIFKRANLKAGNIMFTKGVRTNGKKRIGVVPGVEIGDIFFFRMELILIGLHSQSMAGIDFMPMKADIEGERVAISIVSSGGYEDDAEDPDVLVYTGQGG-NASADKEASDQKLVRGNLALERSL 427 F+ +RR+LSQ+ED+ E + KRA+LKAGNI+ +KG RTN ++R G +PGVE+GDIFFFRME+ ++GLH+ SMAGID++ +K D + E VA+SIVSSG YEDDA D DVL+Y+GQGG +A DKEASDQKL RGNLALERSL Sbjct: 172 FDGIRRRLSQLEDSNEGQTGGIKRADLKAGNILMSKGFRTNMRRRTGAIPGVEVGDIFFFRMEMCVVGLHAPSMAGIDYLNVKGDHQEESVALSIVSSGSYEDDAGDKDVLIYSGQGGVSAKKDKEASDQKLERGNLALERSL 314
BLAST of g.arboreum_cottongen_reftransV1_0000159 vs. ExPASy TrEMBL
Match: V4LKP9_EUTSA (Histone-lysine N-methyltransferase OS=Eutrema salsugineum GN=EUTSA_v10012854mg PE=4 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 9.970e-56 Identity = 94/143 (65.73%), Postives = 117/143 (81.82%), Query Frame = 2 Query: 2 FEALRRKLSQMEDAKESHSEIFKRANLKAGNIMFTKGVRTNGKKRIGVVPGVEIGDIFFFRMELILIGLHSQSMAGIDFMPMKADIEGERVAISIVSSGGYEDDAEDPDVLVYTGQ-GGNASADKEASDQKLVRGNLALERSL 427 F+ALRR+ SQ+EDAKE+ S I KRA+LK+G+ ++GVRTN KKR G++PGVEIGDIFFFR E+ L+GLHS SMAGID++ +K + E E +A SIVSSG Y++D +PDVLVYTGQ GGNA DK+ SDQKL RGNLALE+SL Sbjct: 185 FDALRRRFSQLEDAKEAVSGIIKRADLKSGSTCMSRGVRTNTKKRPGIIPGVEIGDIFFFRFEMCLVGLHSPSMAGIDYLIVKGEAEEEPIATSIVSSGYYDNDEGNPDVLVYTGQGGGNADKDKQTSDQKLERGNLALEKSL 327
BLAST of g.arboreum_cottongen_reftransV1_0000159 vs. ExPASy TrEMBL
Match: A0A059BIW1_EUCGR (Histone-lysine N-methyltransferase OS=Eucalyptus grandis GN=EUGRSUZ_G03176 PE=4 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 2.632e-55 Identity = 91/142 (64.08%), Postives = 116/142 (81.69%), Query Frame = 2 Query: 2 FEALRRKLSQMEDAKESHSEIFKRANLKAGNIMFTKGVRTNGKKRIGVVPGVEIGDIFFFRMELILIGLHSQSMAGIDFMPMKADIEGERVAISIVSSGGYEDDAEDPDVLVYTGQGGNASADKEASDQKLVRGNLALERSL 427 F+ LRR+LSQ+EDAKE S + +R++L+A NI+ TKG RTN +KRIGVVPGVE+GDIFFFRMEL ++GLHSQSM GID++ K ++ E +A+SIVSSG Y+DDAED D+L+Y+GQGG + DK DQKL RGNLALERS+ Sbjct: 171 FDGLRRRLSQLEDAKEVPSGLARRSDLRAANILMTKGFRTNMRKRIGVVPGVEVGDIFFFRMELCMVGLHSQSMGGIDWIGGKGSLDEEPLAVSIVSSGYYDDDAEDKDILIYSGQGGAMTRDKPVGDQKLERGNLALERSM 312
BLAST of g.arboreum_cottongen_reftransV1_0000159 vs. ExPASy TrEMBL
Match: D7LY76_ARALL (Histone-lysine N-methyltransferase OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_487281 PE=4 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 2.697e-55 Identity = 91/142 (64.08%), Postives = 115/142 (80.99%), Query Frame = 2 Query: 2 FEALRRKLSQMEDAKESHSEIFKRANLKAGNIMFTKGVRTNGKKRIGVVPGVEIGDIFFFRMELILIGLHSQSMAGIDFMPMKADIEGERVAISIVSSGGYEDDAEDPDVLVYTGQGGNASADKEASDQKLVRGNLALERSL 427 F+ALRR+ +Q+EDAKE+ S I KR +LKAG+ +GVRTN KKR G+V GVEIGD+FFFR E+ L+GLHS SMAGID++ +K + E E +A SIVSSG Y++D +PDVL+YTGQGGNA DK++SDQKL RGNLALE+SL Sbjct: 153 FDALRRRFAQLEDAKEAVSGIIKRPDLKAGSTCMGRGVRTNTKKRPGIVAGVEIGDVFFFRFEMCLVGLHSPSMAGIDYLVVKGETEEEPIATSIVSSGYYDNDEGNPDVLIYTGQGGNADKDKQSSDQKLERGNLALEKSL 294
BLAST of g.arboreum_cottongen_reftransV1_0000159 vs. ExPASy Swiss-Prot
Match: YDG2_ARATH (YDG domain-containing protein At5g47160 OS=Arabidopsis thaliana GN=At5g47160 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 5.313e-19 Identity = 62/139 (44.60%), Postives = 84/139 (60.43%), Query Frame = 2 Query: 23 LSQMEDAKESHSEIFK-RANLKAGNIMFTKGVRTNGKKRIGVVPGVEIGDIFFFRMELILIGLHSQSMAGIDFMPMKADIEGERVAISIVSSGGYE-DDAEDPDVLVYTGQGGNA-SADKEA-SDQKLVRGNLALERSL 427 L + + A+ SE K R + + I+ G++ N +KRIG VPG+++GD F+ L +IGLH M+GID+M K + E VA SIVSS G + D DV++Y GQGGN S D +A DQKLV GNLAL S+ Sbjct: 222 LDRNKAARRGGSETAKSRIDYQTWTILREMGMQVNSQKRIGSVPGIKVGDKIQFKAALSVIGLHFGIMSGIDYM-YKGNKE---VATSIVSSEGNDYGDRFINDVMIYCGQGGNMRSKDHKAIKDQKLVGGNLALANSI 356
BLAST of g.arboreum_cottongen_reftransV1_0000159 vs. ExPASy Swiss-Prot
Match: SUVH4_ARATH (Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 OS=Arabidopsis thaliana GN=SUVH4 PE=1 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 5.825e-19 Identity = 50/124 (40.32%), Postives = 72/124 (58.06%), Query Frame = 2 Query: 65 FKRANLKAGNIMFTKGVRTNGKKRIGVVPGVEIGDIFFFRMELILIGLHSQSMAGIDFMPMKADIEGER----VAISIVSSGGYEDDAEDPDVLVYTGQGG-NASADK-EASDQKLVRGNLALE 418 R +LK M +K IG +PG+++G FF R E+ +G H+ + GID+M M+ + E +A+SIV SG YEDD ++ D + YTGQGG N + +K + DQ L RGNLAL+ Sbjct: 124 LSRPDLKGVTEMIKAKAILYPRKIIGDLPGIDVGHRFFSRAEMCAVGFHNHWLNGIDYMSMEYEKEYSNYKLPLAVSIVMSGQYEDDLDNADTVTYTGQGGHNLTGNKRQIKDQLLERGNLALK 247
BLAST of g.arboreum_cottongen_reftransV1_0000159 vs. ExPASy Swiss-Prot
Match: UHRF1_RAT (E3 ubiquitin-protein ligase UHRF1 OS=Rattus norvegicus GN=Uhrf1 PE=2 SV=2) HSP 1 Score: 59.6918 bits (143), Expect = 1.440e-9 Identity = 35/97 (36.08%), Postives = 51/97 (52.58%), Query Frame = 2 Query: 140 GVVPGVEIGDIFFFRMELILIGLHSQSMAGIDFMPMKADIEGERVAISIVSSGGYEDDAEDPDVLVYTGQG-----GNASADKEASDQKLVRGNLAL 415 G +PGV +G ++ FR+++ G+H +AGI A S+V +GGYEDD ++ + YTG G GN ++SDQKL N AL Sbjct: 416 GPIPGVPVGTMWRFRVQVSESGVHRPHVAGIHGRSNDG-------AYSLVLAGGYEDDVDNGNFFTYTGSGGRDLSGNKRTAGQSSDQKLTNNNRAL 505
BLAST of g.arboreum_cottongen_reftransV1_0000159 vs. ExPASy Swiss-Prot
Match: SUVHA_ARATH (Putative inactive histone-lysine N-methyltransferase family member SUVH10 OS=Arabidopsis thaliana GN=SUVH10 PE=3 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 1.478e-9 Identity = 31/76 (40.79%), Postives = 50/76 (65.79%), Query Frame = 2 Query: 197 LIGLHSQSMAGIDFMPMK--ADIEGERVAISIVSSGGYEDDAEDPDVLVYTGQGGNASADKEASDQKLVRGNLALE 418 L+GLHS ++ ++F+ ++ D EG+++A+S++SSG D EDPD L++TG GG + +QKL R N+ LE Sbjct: 3 LVGLHSGTID-MEFIGVEDHGDEEGKQIAVSVISSGKNADKTEDPDSLIFTGFGGTDMYHGQPCNQKLERLNIPLE 77
BLAST of g.arboreum_cottongen_reftransV1_0000159 vs. ExPASy Swiss-Prot
Match: UHRF1_MOUSE (E3 ubiquitin-protein ligase UHRF1 OS=Mus musculus GN=Uhrf1 PE=1 SV=2) HSP 1 Score: 59.3066 bits (142), Expect = 1.830e-9 Identity = 35/97 (36.08%), Postives = 51/97 (52.58%), Query Frame = 2 Query: 140 GVVPGVEIGDIFFFRMELILIGLHSQSMAGIDFMPMKADIEGERVAISIVSSGGYEDDAEDPDVLVYTGQG-----GNASADKEASDQKLVRGNLAL 415 G +PGV +G ++ FR+++ G+H +AGI A S+V +GGYEDD ++ + YTG G GN ++SDQKL N AL Sbjct: 424 GPIPGVPVGTMWRFRVQVSESGVHRPHVAGIHGRSNDG-------AYSLVLAGGYEDDVDNGNYFTYTGSGGRDLSGNKRTAGQSSDQKLTNNNRAL 513
BLAST of g.arboreum_cottongen_reftransV1_0000159 vs. ExPASy Swiss-Prot
Match: UHRF1_DANRE (E3 ubiquitin-protein ligase UHRF1 OS=Danio rerio GN=uhrf1 PE=1 SV=1) HSP 1 Score: 58.151 bits (139), Expect = 4.038e-9 Identity = 36/97 (37.11%), Postives = 51/97 (52.58%), Query Frame = 2 Query: 140 GVVPGVEIGDIFFFRMELILIGLHSQSMAGIDFMPMKADIEGERVAISIVSSGGYEDDAEDPDVLVYTGQG-----GNASADKEASDQKLVRGNLAL 415 G VPGV +G ++ FR+++ G+H +AGI A S+V +GGYEDD +D + YTG G GN +++ DQKL N AL Sbjct: 417 GPVPGVPVGTLWKFRVQVSESGVHRPHVAGIHGRSNDG-------AYSLVLAGGYEDDVDDGNEFTYTGSGGRDLSGNKRTAEQSCDQKLTNMNRAL 506
BLAST of g.arboreum_cottongen_reftransV1_0000159 vs. ExPASy Swiss-Prot
Match: UHRF1_XENLA (E3 ubiquitin-protein ligase UHRF1 OS=Xenopus laevis GN=uhrf1 PE=2 SV=1) HSP 1 Score: 56.9954 bits (136), Expect = 1.144e-8 Identity = 45/152 (29.61%), Postives = 71/152 (46.71%), Query Frame = 2 Query: 14 RRKLSQMEDAKESHSEIFKRANLKAGNIM----FTKGVRTNGKKR---------IGVVPGVEIGDIFFFRMELILIGLHSQSMAGIDFMPMKADIEGERVAISIVSSGGYEDDAEDPDVLVYTGQG-----GNASADKEASDQKLVRGNLAL 415 R S++ A E E K+A + + N + KG+ G+ R G +PGV +G ++ FR+++ G+H +AGI + S+V +GGYEDD ++ + YTG G GN +++ DQKL N AL Sbjct: 362 RNDASEVVLAGEKLKESKKKARMASANSSSQRDWGKGMACVGRSRECTIVPSNHYGPIPGVPVGTLWKFRVQVSESGVHRPHVAGIHGRSNDG-------SYSLVLAGGYEDDVDNGNEFTYTGSGGRDLSGNKRTAEQSCDQKLSNMNRAL 506
BLAST of g.arboreum_cottongen_reftransV1_0000159 vs. ExPASy Swiss-Prot
Match: UHRF1_HUMAN (E3 ubiquitin-protein ligase UHRF1 OS=Homo sapiens GN=UHRF1 PE=1 SV=1) HSP 1 Score: 55.8398 bits (133), Expect = 2.452e-8 Identity = 33/97 (34.02%), Postives = 50/97 (51.55%), Query Frame = 2 Query: 140 GVVPGVEIGDIFFFRMELILIGLHSQSMAGIDFMPMKADIEGERVAISIVSSGGYEDDAEDPDVLVYTGQG-----GNASADKEASDQKLVRGNLAL 415 G +PG+ +G ++ FR+++ G+H +AGI A S+V +GGYEDD + + YTG G GN +++ DQKL N AL Sbjct: 419 GPIPGIPVGTMWRFRVQVSESGVHRPHVAGIHGRSNDG-------AYSLVLAGGYEDDVDHGNFFTYTGSGGRDLSGNKRTAEQSCDQKLTNTNRAL 508
BLAST of g.arboreum_cottongen_reftransV1_0000159 vs. ExPASy Swiss-Prot
Match: UHRF1_BOVIN (E3 ubiquitin-protein ligase UHRF1 OS=Bos taurus GN=UHRF1 PE=2 SV=1) HSP 1 Score: 55.4546 bits (132), Expect = 2.845e-8 Identity = 33/97 (34.02%), Postives = 50/97 (51.55%), Query Frame = 2 Query: 140 GVVPGVEIGDIFFFRMELILIGLHSQSMAGIDFMPMKADIEGERVAISIVSSGGYEDDAEDPDVLVYTGQG-----GNASADKEASDQKLVRGNLAL 415 G +PG+ +G ++ FR+++ G+H +AGI A S+V +GGYEDD + + YTG G GN +++ DQKL N AL Sbjct: 423 GPIPGIPVGTMWRFRVQVSESGVHRPHVAGIHG-------RSNHGAYSLVLAGGYEDDVDHGNSFTYTGSGGRDLSGNKRTAEQSCDQKLTNTNRAL 512
BLAST of g.arboreum_cottongen_reftransV1_0000159 vs. ExPASy Swiss-Prot
Match: UHRF1_XENTR (E3 ubiquitin-protein ligase UHRF1 OS=Xenopus tropicalis GN=uhrf1 PE=3 SV=2) HSP 1 Score: 54.299 bits (129), Expect = 8.337e-8 Identity = 33/97 (34.02%), Postives = 50/97 (51.55%), Query Frame = 2 Query: 140 GVVPGVEIGDIFFFRMELILIGLHSQSMAGIDFMPMKADIEGERVAISIVSSGGYEDDAEDPDVLVYTGQG-----GNASADKEASDQKLVRGNLAL 415 G +PGV +G ++ FR+++ G+H +AGI + S+V +GGYEDD ++ YTG G GN +++ DQKL N AL Sbjct: 419 GPIPGVPVGTLWKFRVQVSESGVHRPHVAGIHGRSNDG-------SYSLVLAGGYEDDVDNGSEFTYTGSGGRDLSGNKRTAEQSCDQKLTNMNRAL 508 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0000159 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0000159 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 20
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0000159 ID=g.arboreum_cottongen_reftransV1_0000159; Name=g.arboreum_cottongen_reftransV1_0000159; organism=Gossypium arboreum; type=contig; length=427bpback to top |