g.arboreum_cottongen_reftransV1_0020740, g.arboreum_cottongen_reftransV1_0020740 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy TrEMBL
Match: M4DQ59_BRARP (DNA ligase OS=Brassica rapa subsp. pekinensis GN=Bra018652 PE=3 SV=1) HSP 1 Score: 1032.71 bits (2669), Expect = 0.000e+0 Identity = 524/738 (71.00%), Postives = 612/738 (82.93%), Query Frame = 1 Query: 310 STRPSAFDALMSNARRLAGXXXXXXXXXXXXXXXXXXXXTQNPNPPKTVGSTEVKHDPEVSSDGIGKPINDSPKPDLDEAKKTPDSKKVKVGSTS----ERNAEMKGKIGLLKKKPADFDPNMVACWEKGERVPFLFLSLAFDLISNETGRIVITDIVCNMFRTVIATTPDDLVATVYLAANKVAPAHEGLELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQASRSSQSMMRKPDPLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVYNEQHSKPPPNVQSPLEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEIKVDVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRDATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEPKSYYRCSEMMKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLVRVREDKTPEQASSSEQVAEMYNAQKHNQ 2511 S+RPSAFDALMSNAR A KK + Q NPP++ +++ + SD + +DS KP D DSKK S S ++ EMK KI LLKKKP +FDP V+CWEKGERVPFLF++LAFDLIS E+GRIVITDI+CNM RTVIATTPDDLVATVYLAAN++APAHEG+ELGIG+ S+IKA++EA GRTESQVK + GDLGLVA+ SRSSQ+MM KP+ LTV+KVF+TF+ IAKESGKDS EKKK+R+K+LLVAATDCEP YL RLLQ KLR+GFS QT+LAALGQAAVYNE+HSKPPPN +SPLEEAAKIVKQVF++LPVYD IVPALL+GGVW+LPK+C FT GVP+GPMLAKPTKGV EI+NKFQD F CEYKYDGERAQ+H ME+G+ EIYSRNAE NTGK+PDV A+SR KK SVKSF+LDCE+VA+DR +KKILPFQILSTRARKNV V++IKV VCIFAFD+LYL+GQ L+ E L +R+E+LY+SFEE+PG+FQFAT LTS+D++EIQ FL+++V CEGLIIKTL+ DATYEP+KRS NWLKLKKDYM+SIGD++DLVPIAAFHGRGKRTG +GAFLLACYD + EEFQSICKIGTGFSEA LEERS SLRS+VI PK YYR + + PDVWFE +EVWEVKAADLTISPVHRAA GIVDPDKGISLRFPRL+RVREDK PE+A+SSEQ+A+MY AQKHN Sbjct: 3 SSRPSAFDALMSNARASAAKKKT----------------PQASNPPRSPNKRKIEKTQD--SDLVKTEASDSAKPGSDSPSIAEDSKKGAKKSRSLTQTDKIEEMKSKIALLKKKPGEFDPERVSCWEKGERVPFLFIALAFDLISAESGRIVITDILCNMLRTVIATTPDDLVATVYLAANEIAPAHEGVELGIGEGSVIKAISEAFGRTESQVKKLNTELGDLGLVAKGSRSSQTMMFKPESLTVVKVFNTFRQIAKESGKDSTEKKKDRMKALLVAATDCEPLYLTRLLQAKLRLGFSNQTVLAALGQAAVYNEEHSKPPPNTKSPLEEAAKIVKQVFTVLPVYDIIVPALLSGGVWNLPKTCNFTLGVPIGPMLAKPTKGVGEILNKFQDTVFTCEYKYDGERAQVHCMEDGTFEIYSRNAERNTGKYPDVALALSRLKKPSVKSFILDCEVVAFDREKKKILPFQILSTRARKNVNVNDIKVGVCIFAFDMLYLNGQQLIQENLNIRREKLYESFEEDPGYFQFATTLTSSDIDEIQKFLDASVDIGCEGLIIKTLNSDATYEPAKRSNNWLKLKKDYMDSIGDSVDLVPIAAFHGRGKRTGVFGAFLLACYDADKEEFQSICKIGTGFSEAVLEERSTSLRSRVIATPKQYYRVGDSLNPDVWFEPTEVWEVKAADLTISPVHRAATGIVDPDKGISLRFPRLLRVREDKKPEEATSSEQIADMYQAQKHNH 722
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy TrEMBL
Match: A0A087HLW6_ARAAL (DNA ligase OS=Arabis alpina GN=AALP_AA1G082300 PE=3 SV=1) HSP 1 Score: 1031.94 bits (2667), Expect = 0.000e+0 Identity = 528/738 (71.54%), Postives = 616/738 (83.47%), Query Frame = 1 Query: 310 STRPSAFDALMSNARRLAGXXXXXXXXXXXXXXXXXXXXTQNPNPPKTVGSTEVKHDPEVSSDGIGKPINDSPKPDLDEAKKTPDSKKV----KVGSTSERNAEMKGKIGLLKKKPADFDPNMVACWEKGERVPFLFLSLAFDLISNETGRIVITDIVCNMFRTVIATTPDDLVATVYLAANKVAPAHEGLELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQASRSSQSMMRKPDPLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVYNEQHSKPPPNVQSPLEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEIKVDVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRDATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEPKSYYRCSEMMKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLVRVREDKTPEQASSSEQVAEMYNAQKHNQ 2511 S+RPSAFDALMS AR A KK+ +S+P++ TQ+ + K + S E+ ++DS KP D +SK V +V S S++ E+K KI LLKKKP DF P V+CWEKGERVPFLF++LAFDLISNE+GRIVITDI+CNM RTVIATTPDDLVATVYLAAN++APAHEG+ELGIG+ SIIKA++EA GRTE+QVK + GDLGLVA+ SRSSQ+MM KP+PLTV+KVF+TF+ IAKESGKDS EKKK+R+K+LLVAATDCEP YL RLLQ KLR+GFS QT+LAALGQAAVYNE+HSKPPP +SPLEEAAKIVKQVF++LPVYD IVPALLTGGVW+LPK+C FT GVP+GPMLAKPTKGV EI+NKFQD F CEYKYDGERAQ+H ME+G+ EIYSRNAE NTGK+PDV A+SR KK SVKSF+LDCE+VA+DR +KKILPFQILSTRARKNV V++IKV VCIFAFD+LYL+GQ L+ E LK+R+E+LYDSFEE+PG+FQFATALTS+D++EIQ FL+++V CEGLIIKTLD DATYEP+KRS NWLKLKKDYM+SIGD++DLVPIAAFHGRGKRTG +GAFLLACYD + EE+QSICKIGTGFSEA LEERS SLRSKVI PK YYR + + PDVWFE +EVWEVKAADLTISPVHRAA GIVDP KGISLRFPRL+RVREDK PE A+SSEQ+A+MY AQKHN Sbjct: 3 SSRPSAFDALMSKARESAKKKTPQASTPSRSPNKRKIGETQDADLGKALVSEGTVSKIEI--------VSDSEKPRSDSVSIAEESKNVAKKPRVLSQSDKVMELKSKIELLKKKPGDFKPEKVSCWEKGERVPFLFVALAFDLISNESGRIVITDILCNMLRTVIATTPDDLVATVYLAANEIAPAHEGIELGIGEGSIIKAISEAFGRTEAQVKKLNTELGDLGLVAKGSRSSQTMMFKPEPLTVVKVFNTFRQIAKESGKDSTEKKKDRMKALLVAATDCEPLYLTRLLQAKLRLGFSNQTVLAALGQAAVYNEEHSKPPPTTKSPLEEAAKIVKQVFTVLPVYDIIVPALLTGGVWNLPKTCNFTLGVPIGPMLAKPTKGVGEILNKFQDTVFTCEYKYDGERAQVHCMEDGTFEIYSRNAERNTGKYPDVALALSRLKKPSVKSFILDCEVVAFDREKKKILPFQILSTRARKNVNVNDIKVGVCIFAFDMLYLNGQQLIQENLKIRREKLYDSFEEDPGYFQFATALTSSDIDEIQKFLDASVDIGCEGLIIKTLDSDATYEPAKRSNNWLKLKKDYMDSIGDSVDLVPIAAFHGRGKRTGVFGAFLLACYDVDKEEYQSICKIGTGFSEAVLEERSTSLRSKVIATPKQYYRVGDSLNPDVWFEPTEVWEVKAADLTISPVHRAATGIVDPVKGISLRFPRLLRVREDKKPEDATSSEQIADMYQAQKHNH 732
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy TrEMBL
Match: A0A078E250_BRANA (DNA ligase OS=Brassica napus GN=BnaA06g04600D PE=3 SV=1) HSP 1 Score: 1029.62 bits (2661), Expect = 0.000e+0 Identity = 523/738 (70.87%), Postives = 612/738 (82.93%), Query Frame = 1 Query: 310 STRPSAFDALMSNARRLAGXXXXXXXXXXXXXXXXXXXXTQNPNPPKTVGSTEVKHDPEVSSDGIGKPINDSPKPDLDEAKKTPDSKKVKVGSTS----ERNAEMKGKIGLLKKKPADFDPNMVACWEKGERVPFLFLSLAFDLISNETGRIVITDIVCNMFRTVIATTPDDLVATVYLAANKVAPAHEGLELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQASRSSQSMMRKPDPLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVYNEQHSKPPPNVQSPLEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEIKVDVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRDATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEPKSYYRCSEMMKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLVRVREDKTPEQASSSEQVAEMYNAQKHNQ 2511 S+RPSAFDALMSNAR A KK + Q NPP++ +++ + SD + +DS KP D DSKK S S ++ EMK KI LLKKKP +FDP V+CWEKGERVPFLF++LAFDLIS E+GRIVITDI+CNM RTVIATTPDDLVATVYL+AN++APAHEG+ELGIG+ SIIKA++EA GRTESQVK + GDLGLVA+ SRSSQ+MM KP+ LTV+KVF+TF+ IAKESGKDS EKKK+R+K+LLVAATDCEP YL RLLQ KLR+GFS QT+LAALGQAAVYNE+HSKPPP+ +SPLEEAAKIVKQVF++LPVYD IVPALL+GGVW+LPK+C FT GVP+GPMLAKPTKGV EI+NKFQD F CEYKYDGERAQ+H ME+G+ EIYSRNAE NTGK+PDV A+SR KK SVKSF+LDCE+VA+DR +KKILPFQILSTRARKNV V++IKV VCIFAFD+LYL+GQ L+ E L +R+E+LY+SFEE+PG+FQFAT LTS+D++EIQ FL+++V CEGLIIKTL+ DATYEP+KRS NWLKLKKDYM+SIGD++DLVPIAAFHGRGKRTG +GAFLLACYD + EEFQSICKIGTGFSEA LEERS SLRS+VI PK YYR + + PDVWFE +EVWEVKAADLTISPVHRAA GIVDPDKGISLRFPRL+RVREDK PE+A+SSEQ+A+MY AQKHN Sbjct: 3 SSRPSAFDALMSNARASAAKKKT----------------PQASNPPRSPNKRKIEKTQD--SDLVKTEASDSAKPGSDPPSIAEDSKKGAKKSRSLTQTDKIEEMKSKIALLKKKPGEFDPERVSCWEKGERVPFLFIALAFDLISAESGRIVITDILCNMLRTVIATTPDDLVATVYLSANEIAPAHEGVELGIGEGSIIKAISEAFGRTESQVKKLNTELGDLGLVAKGSRSSQTMMFKPESLTVVKVFNTFRQIAKESGKDSTEKKKDRMKALLVAATDCEPLYLTRLLQAKLRLGFSNQTVLAALGQAAVYNEEHSKPPPSTKSPLEEAAKIVKQVFTVLPVYDIIVPALLSGGVWNLPKTCNFTLGVPIGPMLAKPTKGVGEILNKFQDTVFTCEYKYDGERAQVHCMEDGTFEIYSRNAERNTGKYPDVALALSRLKKPSVKSFILDCEVVAFDREKKKILPFQILSTRARKNVNVNDIKVGVCIFAFDMLYLNGQQLIQENLNIRREKLYESFEEDPGYFQFATTLTSSDIDEIQKFLDASVDIGCEGLIIKTLNSDATYEPAKRSNNWLKLKKDYMDSIGDSVDLVPIAAFHGRGKRTGVFGAFLLACYDADKEEFQSICKIGTGFSEAVLEERSTSLRSRVIATPKQYYRVGDSLNPDVWFEPTEVWEVKAADLTISPVHRAATGIVDPDKGISLRFPRLLRVREDKKPEEATSSEQIADMYQAQKHNH 722
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy TrEMBL
Match: A0A078EW74_BRANA (DNA ligase OS=Brassica napus GN=BnaA09g49030D PE=3 SV=1) HSP 1 Score: 1025 bits (2649), Expect = 0.000e+0 Identity = 542/797 (68.01%), Postives = 640/797 (80.30%), Query Frame = 1 Query: 145 MLTFRPSHLLRYTCCITRPLTPLLPPFSSHILPSN---SPFFRPKPXXXXXXNPHSNMSTRPSAFDALMSNARRLAGXXXXXXXXXXXXXXXXXXXXTQNPNPPK-TVGSTEVKHDP--EVSSDGIGKPINDSPK--PDLDEAKKTPDSKKVKVGSTSERNAEMKGKIGLLKKKPADFDPNMVACWEKGERVPFLFLSLAFDLISNETGRIVITDIVCNMFRTVIATTPDDLVATVYLAANKVAPAHEGLELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQASRSSQSMMRKPDPLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVYNEQHSKPPPNVQSPLEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEIKVDVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRDATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEPKSYYRCSEMMKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLVRVREDKTPEQASSSEQVAEMYNAQKHNQ 2511 ML R S+ R CI+ T FSS ++ N SPF S S L+ + S+RPSAFDALMSNAR A K+K+ + +P+P K + T+ P E SD KP +DSP DL + KT D+ K +++ E+K +I LLK+KP +FDP VACWEKGERVPFLF++LAFDL+S E+GRIVITDI+CNM RTVIATTPDDLVA VYLAAN++APAHEG+ELGIG+ SIIKA++EA GRTE+QVK + GDLGLVA+ SRSSQ+MM KP+PLTV+KVF+TF+ IAKESGKDS EKKK+R+K+LLVAATDCEP YL RLLQ KLR+GFS QT+LAALGQAAVYNE+HSKPPP +SPLEEAAKIVKQVF++LPVYD IVPALLTGGVW+LPK+C FT GVP+GPMLAKPTKGV EI+NKFQD F CEYKYDGERAQ+H ME+G+ EIYSRNAE NTGK+PDV A+SR KK SVKSF+LDCE+VA+DR +KKILPFQILSTRARKNV V++IKV VCIFAFD+LYL+GQ L+ E L +R+E+LY SFEE+PG+FQFATALTS+D++EIQ FL+++V CEGLIIKT++ DATYEP+KRS NWLKLKKDYM+SIGD++DLVPIAAFHGRGKRTG +GAFLLACYD + EEFQSICKIGTGFSEA LEERS SLRS+VIP PK YYR + + PDVWFE +EVWEVKAADLTISPVHRAA GIVDPDKGISLRFPRL+RVREDK PE+A+SSEQ+A+MY AQKHN Sbjct: 1 MLAIRSSNHFR---CISSLCTKTR--FSSVLVSLNRQVSPF-----PSSSRLHHRAMSSSRPSAFDALMSNARASA------------KKKTTPQASNSSPSPNKRKISKTQDADSPKAEAFSDS-PKPRSDSPSIAEDLKKGAKTQDADLTK----TDKVDELKSRIVLLKRKPGEFDPERVACWEKGERVPFLFVALAFDLVSAESGRIVITDILCNMLRTVIATTPDDLVAAVYLAANEIAPAHEGVELGIGEGSIIKAISEAFGRTEAQVKKLNTELGDLGLVAKGSRSSQTMMFKPEPLTVVKVFNTFRQIAKESGKDSTEKKKDRMKALLVAATDCEPLYLTRLLQAKLRLGFSNQTVLAALGQAAVYNEEHSKPPPKTKSPLEEAAKIVKQVFTVLPVYDIIVPALLTGGVWNLPKTCNFTLGVPIGPMLAKPTKGVGEILNKFQDTVFTCEYKYDGERAQVHCMEDGTFEIYSRNAERNTGKYPDVALALSRLKKPSVKSFILDCEVVAFDREKKKILPFQILSTRARKNVNVNDIKVGVCIFAFDMLYLNGQQLIQENLDIRREKLYGSFEEDPGYFQFATALTSSDIDEIQKFLDASVDIGCEGLIIKTMNSDATYEPAKRSNNWLKLKKDYMDSIGDSVDLVPIAAFHGRGKRTGVFGAFLLACYDADKEEFQSICKIGTGFSEAVLEERSTSLRSRVIPTPKQYYRVGDSLNPDVWFEPTEVWEVKAADLTISPVHRAANGIVDPDKGISLRFPRLLRVREDKKPEEATSSEQIADMYQAQKHNH 770
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy TrEMBL
Match: M4ES34_BRARP (DNA ligase OS=Brassica rapa subsp. pekinensis GN=Bra031612 PE=3 SV=1) HSP 1 Score: 1022.69 bits (2643), Expect = 0.000e+0 Identity = 528/758 (69.66%), Postives = 619/758 (81.66%), Query Frame = 1 Query: 310 STRPSAFDALMSNARRLAGXXXXXXXXXXXXXXXXXXXXTQNPNPPK-TVGSTEVKHDP--EVSSDGIGKPINDSPK--PDLDEAKKTPDS-------------------KKVKVGSTSERNAEMKGKIGLLKKKPADFDPNMVACWEKGERVPFLFLSLAFDLISNETGRIVITDIVCNMFRTVIATTPDDLVATVYLAANKVAPAHEGLELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQASRSSQSMMRKPDPLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVYNEQHSKPPPNVQSPLEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEIKVDVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRDATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEPKSYYRCSEMMKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLVRVREDKTPEQASSSEQVAEMYNAQKHNQ 2511 S+RPSAFDALMSNAR A K+K+ + +P+P K + T+ P E SD KP +DSP DL + KT D+ KK + S +++ E+K +I LLK+KP +FDP VACWEKGERVPFLF++LAFDL+S E+GRIVITDI+CNM RTVIATTPDDLVA VYLAAN++APAHEG+ELGIG+ SIIKA++EA GRTE+QVK + GDLGLVA+ SRSSQ+MM KP+PLTV+KVF+TF+ IAKESGKDS EKKK+R+K+LLVAATDCEP YL RLLQ KLR+GFS QT+LAALGQAAVYNE+HSKPPP +SPLEEAAKIVKQVF++LPVYD IVPALLTGGVW+LPK+C FT GVP+GPMLAKPTKGV EIINKFQD F CEYKYDGERAQIH ME+G+ EIYSRNAE NTGK+PDV A+SR KK SVKSF+LDCE+VA+DR +KKILPFQILSTRARKNV V++IKV VCIFAFD+LYL+GQ L+ E L +R+E+LY SFEE+PG+FQFATALTS+D++EIQ FL+++V CEGLIIKT++ DATYEP+KRS NWLKLKKDYM+SIGD++DLVPIAAFHGRGKRTG +GAFLLACYD + EEFQSICKIGTGFSEA LEERS SLRS+VIP PK YYR + + PDVWFE +EVWEVKAADLTISPVHRAA GIVDPDKGISLRFPRL+RVREDK PE+A+SSEQ+A+MY AQKHN Sbjct: 3 SSRPSAFDALMSNARASA------------KKKTTPQASNSSPSPNKRKISKTQDADSPKAEAFSDS-PKPRSDSPSIAEDLKKGAKTQDADLTKVEAFSDSAKPRSSIAKKSRTLSQTDKVDELKSRIVLLKRKPGEFDPERVACWEKGERVPFLFVALAFDLVSAESGRIVITDILCNMLRTVIATTPDDLVAAVYLAANEIAPAHEGVELGIGEGSIIKAISEAFGRTEAQVKKLNTELGDLGLVAKGSRSSQTMMFKPEPLTVVKVFNTFRQIAKESGKDSTEKKKDRMKALLVAATDCEPLYLTRLLQAKLRLGFSNQTVLAALGQAAVYNEEHSKPPPKTKSPLEEAAKIVKQVFTVLPVYDIIVPALLTGGVWNLPKTCNFTLGVPIGPMLAKPTKGVGEIINKFQDTVFTCEYKYDGERAQIHCMEDGTFEIYSRNAERNTGKYPDVALALSRLKKPSVKSFILDCEVVAFDREKKKILPFQILSTRARKNVNVNDIKVGVCIFAFDMLYLNGQQLIQENLDIRREKLYGSFEEDPGYFQFATALTSSDIDEIQKFLDASVDIGCEGLIIKTMNSDATYEPAKRSNNWLKLKKDYMDSIGDSVDLVPIAAFHGRGKRTGVFGAFLLACYDADKEEFQSICKIGTGFSEAVLEERSTSLRSRVIPTPKQYYRVGDSLNPDVWFEPTEVWEVKAADLTISPVHRAANGIVDPDKGISLRFPRLLRVREDKKPEEATSSEQIADMYQAQKHNH 747
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy Swiss-Prot
Match: DNLI_STAMF (DNA ligase OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=lig PE=1 SV=2) HSP 1 Score: 320.472 bits (820), Expect = 5.790e-95 Identity = 220/619 (35.54%), Postives = 349/619 (56.38%), Query Frame = 1 Query: 694 VPFLFLSLAFDLISNETGRIVITDIVCNMFRTVIATTPDDLVATVYLAANKVAPAHEGL-ELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQ------------ASRSSQSMMRKPDPLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVYNE-QHSKPPPNVQSPLEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTP--GVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEIK-VDVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRDATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEPKSYYRCSEMMKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLVRVREDKTPEQASSSEQVAEMYNAQ 2499 +PF L+ F+ I T R +T ++ N+F+ T P+ + VYL ++ P +GL ELG+G+ +IKA+A A TES+V+S YK GDLG A+ + S + + LTV +V++T +A +G+ S++ K + LL A+ E +Y+IR ++ +LR+G + T++ AL A VY H++P IV++ +++ I L T G+ L G P G+P+ PMLA+ EI+ K I F+ EYKYDGERAQIH + + + IYSR E T ++PDVV ++ K++ ++ E+VAYD ++ PFQ L R RK+ + IK V V ++ FD+LY+DG+ + L R+ +L + E+ F Q A + +N+ +E++ F A+ EG++IK L ++A Y+ R W+K K+DY + DT+DLV I AF+GRG+R G YGA L+A Y+ + + F+S+CK+G+GF + ++++ L+ +I + R MKPDVW + V E+ A+LT+SP+H + I+ P GIS+RFPR +R R DK PE A++S+++ EMY Q Sbjct: 1 MPFRELADTFERIEIITSRTQMTVLLVNLFKK---TPPEIIDKVVYLLQGRLWPDWKGLPELGVGEKMLIKAIALATQSTESEVESLYKSLGDLGKAAEKLKAIYEEKLKKGAMSILAFVPVKRELTVSQVYETLSRVALATGEGSRDIKLKLLAGLLSDASPKEAKYIIRFVEGRLRLGIGDATIMDAL--AIVYGGGAHARP-------------IVERAYNLRADLGHIAKILATQGLNALK---GIKPQVGIPIRPMLAERLNNPVEILKKVGGIAFV-EYKYDGERAQIHKLGD-KIWIYSRRLENITHQYPDVVDYARKYIKANEAI--VEGEIVAYDPDTGELRPFQELMHRKRKHDIHIAIKEVPVKVYLFDLLYVDGEDYTLKPLPERRAKLVEIIEQTETF-QIAEYIRTNNPDELEKFFLKAIEDGAEGVMIKALHKNAIYQAGTRGWLWIKYKRDYKSEMIDTVDLVVIGAFYGRGRRGGKYGALLMASYNPDKDVFESVCKVGSGFKDEDIDKLPEMLKPYIIEH--KHPRVVARMKPDVWVTPALVAEIIGAELTLSPLHTCCLDIIKPGVGISIRFPRFIRWRPDKGPEDATTSQELLEMYKRQ 591
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy Swiss-Prot
Match: DNLI_CALMQ (DNA ligase OS=Caldivirga maquilingensis (strain ATCC 700844 / DSM 13496 / JCM 10307 / IC-167) GN=lig PE=3 SV=1) HSP 1 Score: 315.079 bits (806), Expect = 7.035e-93 Identity = 200/596 (33.56%), Postives = 324/596 (54.36%), Query Frame = 1 Query: 766 IVCNMFRTVIATTPDDLV-ATVYLAANKVAPAHEGLELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQASRSSQSMMRKPDP--------------LTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVYNEQHSKPPPNVQSPLEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEIK-VDVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRDATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEPKSYYRCSEMMKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLV-RVREDKTPEQASSSEQVAEMYNAQK 2502 ++ +++A TP ++ +Y + P EG+ELG+ + ++A++ A G QV+ YK GD G VA+ R+++ K LT+ KV+DT IAK SG+ +Q+ K + SLL A E +Y+ R + +LR+G ++ T+L AL A N ++++ + + P KI L GG + K+ TPGVP+ PMLA+ EI+NK + ICE+KYDGER QIH +++G+V+I+SR E T ++PDV A +R + + ++ E VA D + PFQ L R RK+ + I+ + ++ FD++Y++GQ L L RK+ L+ S + A + ++D + ++ F A+SS CEG++ K++ + YE R W+K K+DY + DT+DLV + AF GRGKR G YGA LLA YD ++++F ++CK+G+GF++ +L++ L IP + R M+PD+WF V E+ A++T+SP+H ++ D G+++RFPR R R DK PE A++ +++ EMY+ QK Sbjct: 25 VMAKALSSLLAKTPPQVIDKVIYFLLGSLRPDWEGVELGLAERLTLRAISMATGLPIRQVEELYKKLGDAGEVAK--RAAEIKRSKGGGGTIFDFIDTGPKRRLTISKVYDTLMAIAKASGEGAQDTKVKLLSSLLTDAEPDEAKYITRFVIGRLRLGVADMTILDALSDAFDVNRD-----------------LLEKAYHVYPDLGKIAKTLAEGGE-EAVKAIKVTPGVPIQPMLAERLSSPKEILNKLGGVA-ICEFKYDGERMQIHKLKDGTVKIFSRRMEDITNQYPDV-AEYAREAIDAEEFI-VEGEGVAIDPDTGEFKPFQELMHRKRKHNIKEAIEEYPINLYLFDVMYVNGQDLTDLPLPDRKKVLF-SIIKPHEHVHHADWIITDDADSLEKFFLDAISSGCEGVMCKSVKLGSVYEMGARGWLWIKYKRDYKSELSDTMDLVVVGAFWGRGKRAGTYGALLLAAYDPDSDQFYTVCKVGSGFTDEDLKKLPQMLEPYKIPH--RHPRVVSKMEPDIWFTPGLVLEITGAEITMSPLHTCCSVMLKGDVGLAIRFPRFTGRYRTDKRPEDATTVKEIFEMYSNQK 594
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy Swiss-Prot
Match: DNLI2_THEPD (DNA ligase 2 OS=Thermofilum pendens (strain Hrk 5) GN=lig2 PE=3 SV=1) HSP 1 Score: 308.916 bits (790), Expect = 9.540e-91 Identity = 201/613 (32.79%), Postives = 327/613 (53.34%), Query Frame = 1 Query: 694 VPFLFLSLAFDLISNETGRIVITDIVCNMFRTVIATTPDDLVATVYLAANKVAPAHEGLELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQASRSS--QSMMR------KPDPLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVYNEQHSKPPPNVQSPLEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEIK-VDVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRDATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEPKSYYRCSEMMKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLV-RVREDKTPEQASSSEQVAEMYNAQK 2502 +P+ L+ ++ I + + R+ +TD + +F+ T P+ + VYL ++ P +EG+ELG+ + ++ALA+A GR V+ YK GD+G VA+ ++ ++ + LTV +V+ IA+ SG+ +QE K N + +LL A E +Y++R + +LR+G ++ T+L AL A ++ ++++ ++ P I L T G+ D S G+PV PMLA+ AEI+ K + EYKYDGER Q H V ++SR E T +PDVV + R K ++ E+VAY+ ++LPFQ L R RK V +K V ++ FD++Y+DG+ L+ + L R+ L E +TA D +++ F A+S CEG++ K++ + Y+ R W+K K+DY + DT+DLV + FHGRGKR G YGA L+A YD + F+++CK+GTGF++ +L + L IP + R ++ DVWF + V E+ A++T+SP+H A+ ++ G+++RFPR R R DK PEQA++ ++ EMY +QK Sbjct: 7 LPYSVLADFYERIESTSSRLAMTDYLVALFKK---TPPEVIDKVVYLTQGQLRPDYEGVELGVAEKLALRALAKASGRHLKDVEDLYKKTGDIGAVAEKLLTAPGGGLLEFFGTPVQKKELTVSQVYSALMKIAQASGEGAQETKVNTLVALLQDAKPKEARYILRTVLGRLRLGIADMTILDALAAAFAGSKAARD--------------VIERAYTKHPDLGYIAKLLATKGL-DAVASLKIEVGIPVLPMLAERLSDPAEILEKLGG-KCLAEYKYDGERVQAH-KSGDKVLLFSRRLENITHHYPDVVEYVKRLKVREAI---VEGEIVAYNPDTGEMLPFQELMHRRRKYDVEKAMKEYPVRVYLFDVIYMDGEELIEKPLDQRRLILEKIVPEGDEDILLSTAKVVGDAKDLLHFFEQAISEGCEGVMCKSIGPGSIYQMGARGWLWIKFKRDYRMEMTDTVDLVVVGGFHGRGKRAGTYGALLMAAYDPETDTFKTVCKVGTGFTDEDLAKLPELLDPYKIPH--RHPRVFSKIEADVWFVPAVVLEIIGAEITLSPLHTCALNKLEEGAGLAIRFPRFTGRYRFDKKPEQATTESELIEMYKSQK 594
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy Swiss-Prot
Match: DNLI2_KORCO (DNA ligase 2 OS=Korarchaeum cryptofilum (strain OPF8) GN=lig2 PE=3 SV=1) HSP 1 Score: 308.145 bits (788), Expect = 1.879e-90 Identity = 196/607 (32.29%), Postives = 329/607 (54.20%), Query Frame = 1 Query: 700 FLFLSLAFDLISNETGRIVITDIVCNMFRTVIATTPDDLVATVYLAANKVAPAHEGLELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQ---ASRSSQSMMRKPDPLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVYNEQHSKPPPNVQSPLEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEIKV-DVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRDATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEPKSYYRCSEM---MKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLVRVREDKTPEQASSSEQVAEMYNAQ 2499 F+ ++ ++ I TGR+ + D + N+F ++T P+ L VYL +A + EG+ELG+G+ ++AL+ A G + +++ +Y GD+G +A+ + +++QS + LTV +VFDT +A+ +G+ +Q+ K I +L A E +Y+ R++ KLR+G + T+L AL +A + + +++ ++I P KI + G+ L + T G+PV PMLA+ + EI+ K F E+KYDGER QIH ++G V+I+SR E T +PDV +S+ + LDCE VA + +ILPFQ L R RK V +K +AFD+LYLDG+ LL EQL R++ L + +E ++EE++ F AV EGL++K D + Y+ R +W+KLK+ Y+ + + +DLV + AF G+GKR G YGA L+A Y + F+++CK+G+GF + + K++ + K ++ + ++ DV+F +V +V ++T+SP H V + G+++RFPR + R+DK P+ A++ E++ EMY Q Sbjct: 3 FIDVAKIYEKIEATTGRLEMIDYLKNLF---LSTPPEILDKIVYLTLGNIAASFEGIELGVGEKLFLRALSLATGIPQERLEEEYPKLGDIGKLAEWAVSKKAAQSFF--TEDLTVERVFDTLSKVARATGEGAQDLKVRLIAGILSDAKPLEARYIARIVTEKLRLGVRDMTVLDALSEAFLKGRAYRDK--------------LERKYNIYPDIGKIAKVVAEKGIKGLDE-ITITLGIPVRPMLAQRLRSAEEIMEKIGPRIF-AEFKYDGERMQIHVWKDGKVKIFSRRLEDITEPYPDVREYVSKAVEGHEVV--LDCETVAINPDTGEILPFQELMHRRRKYGVEEAMKTYPTVTYAFDLLYLDGRELLDEQLDDRRKILKEILKENEKARLVQYEEIDGNVEELERFFEHAVEMGTEGLVVK--DPKSIYQAGVRGWSWIKLKRSYISKMIEPVDLVVVGAFWGKGKRAGTYGALLMAAYSPEEDVFKTVCKMGSGF-----TDEELARMPKLLEDYKIDHKHPSVISNIEADVYFVPVKVAQVLGDEITLSPTHTCGWNKVRKNAGLAIRFPRFMGWRDDKGPQDATTEEEIIEMYKEQ 579
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy Swiss-Prot
Match: DNLI_ACIAM (DNA ligase OS=Acidianus ambivalens GN=lig PE=3 SV=1) HSP 1 Score: 306.22 bits (783), Expect = 1.119e-89 Identity = 196/613 (31.97%), Postives = 340/613 (55.46%), Query Frame = 1 Query: 700 FLFLSLAFDLISNETGRIVITDIVCNMFRTVIATTPDDLVATVYLAANKVAPAHEGL-ELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVA---QASRSSQSMM------RKPDPLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVYNEQHSKPPPNVQSPLEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEIK-VDVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRDATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXX--XXXXXXXXXKVIPEPKSYYRCSEMMKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLVRVREDKTPEQASSSEQVAEMYNAQ 2499 F ++ FD + + R+ +T ++ ++F+ D +V Y+ K+ P G+ ELGIG+ +I+AL+ A ++ +++ YK GDLG VA + + S S++ + PLTV KV+D +A +G+ S++ K + LL A+ E +YL+R + +LR+G + T+L AL Q+ +P IV++ +++ I L GG+ L K+ PG+P+ PMLA+ AE+++K +I + +YKYDGER QIH + + I+SR E T ++PDV IS++ K + ++ E++ D ++ PFQ L R RK+ + IK V +F FD++Y +G+ + L R+++L +S E+ + AT + ++++E+++ F A+S EG+++K+L DA Y+ R W+K K+DY + DT+DLV + AFHG+G++ G Y +FL+A Y+ + + F+++CK+ +GF++AEL ++ + + P P R M PDVW + V E+ A++TISP+H + G+S+RFPR +R R DK+PE A+++ ++ EMY +Q Sbjct: 3 FKIIAEYFDRLEKISSRLQLTSLLADLFKKTDKNVIDKVV---YIIQGKLWPDFLGMPELGIGEKFLIRALSIATSVSDDEIEKMYKSVGDLGQVAFDIKQKQQSASILAFLGAQKASKPLTVEKVYDDLAKVATSTGEGSRDIKIRLLAGLLKDASPLEAKYLVRFVDGRLRVGIGDATILDALA-ITFGGGQNFRP-------------IVERAYNLRADLGNIAKILANGGIEQL-KNIKPQPGIPIRPMLAERLSDPAEMLSKVGNIALV-DYKYDGERGQIHKAGD-KIFIFSRRLENITNQYPDVAEYISKYVKGNEFI--VEGEIIPVDPETGEMRPFQELMHRKRKSDIHEAIKEYPVNVFLFDLMYYEGEDYTVKPLSERRKKL-ESIVEDNDYVHIATHIITDNVEKLKEFFYQAISEGAEGVMVKSLAPDAIYQAGSRGWLWIKFKRDYQSEMADTVDLVMVGAFHGKGRKGGKYSSFLMAAYNPDKDVFETVCKVASGFTDAELDDLQKKIAELKRDTPHP----RVVSTMVPDVWLTPALVAEIIGAEITISPLHTCCKDQY-AEGGLSIRFPRFIRWRPDKSPEDATTNREILEMYKSQ 587 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pages
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
Pages
InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0020740 ID=g.arboreum_cottongen_reftransV1_0020740; Name=g.arboreum_cottongen_reftransV1_0020740; organism=Gossypium arboreum; type=contig; length=3157bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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