g.arboreum_cottongen_reftransV1_0020740, g.arboreum_cottongen_reftransV1_0020740 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0020740
Unique Nameg.arboreum_cottongen_reftransV1_0020740
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length3157
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr7chromosomeg.arboreum_cottongen_reftransV1_0020740:1..3156 .
Chr7:78672998..78682093 +
Homology
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy TrEMBL
Match: M4DQ59_BRARP (DNA ligase OS=Brassica rapa subsp. pekinensis GN=Bra018652 PE=3 SV=1)

HSP 1 Score: 1032.71 bits (2669), Expect = 0.000e+0
Identity = 524/738 (71.00%), Postives = 612/738 (82.93%), Query Frame = 1
Query:  310 STRPSAFDALMSNARRLAGXXXXXXXXXXXXXXXXXXXXTQNPNPPKTVGSTEVKHDPEVSSDGIGKPINDSPKPDLDEAKKTPDSKKVKVGSTS----ERNAEMKGKIGLLKKKPADFDPNMVACWEKGERVPFLFLSLAFDLISNETGRIVITDIVCNMFRTVIATTPDDLVATVYLAANKVAPAHEGLELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQASRSSQSMMRKPDPLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVYNEQHSKPPPNVQSPLEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEIKVDVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRDATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEPKSYYRCSEMMKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLVRVREDKTPEQASSSEQVAEMYNAQKHNQ 2511
            S+RPSAFDALMSNAR  A KK +                 Q  NPP++    +++   +  SD +    +DS KP  D      DSKK    S S    ++  EMK KI LLKKKP +FDP  V+CWEKGERVPFLF++LAFDLIS E+GRIVITDI+CNM RTVIATTPDDLVATVYLAAN++APAHEG+ELGIG+ S+IKA++EA GRTESQVK    + GDLGLVA+ SRSSQ+MM KP+ LTV+KVF+TF+ IAKESGKDS EKKK+R+K+LLVAATDCEP YL RLLQ KLR+GFS QT+LAALGQAAVYNE+HSKPPPN +SPLEEAAKIVKQVF++LPVYD IVPALL+GGVW+LPK+C FT GVP+GPMLAKPTKGV EI+NKFQD  F CEYKYDGERAQ+H ME+G+ EIYSRNAE NTGK+PDV  A+SR KK SVKSF+LDCE+VA+DR +KKILPFQILSTRARKNV V++IKV VCIFAFD+LYL+GQ L+ E L +R+E+LY+SFEE+PG+FQFAT LTS+D++EIQ FL+++V   CEGLIIKTL+ DATYEP+KRS NWLKLKKDYM+SIGD++DLVPIAAFHGRGKRTG +GAFLLACYD + EEFQSICKIGTGFSEA LEERS SLRS+VI  PK YYR  + + PDVWFE +EVWEVKAADLTISPVHRAA GIVDPDKGISLRFPRL+RVREDK PE+A+SSEQ+A+MY AQKHN 
Sbjct:    3 SSRPSAFDALMSNARASAAKKKT----------------PQASNPPRSPNKRKIEKTQD--SDLVKTEASDSAKPGSDSPSIAEDSKKGAKKSRSLTQTDKIEEMKSKIALLKKKPGEFDPERVSCWEKGERVPFLFIALAFDLISAESGRIVITDILCNMLRTVIATTPDDLVATVYLAANEIAPAHEGVELGIGEGSVIKAISEAFGRTESQVKKLNTELGDLGLVAKGSRSSQTMMFKPESLTVVKVFNTFRQIAKESGKDSTEKKKDRMKALLVAATDCEPLYLTRLLQAKLRLGFSNQTVLAALGQAAVYNEEHSKPPPNTKSPLEEAAKIVKQVFTVLPVYDIIVPALLSGGVWNLPKTCNFTLGVPIGPMLAKPTKGVGEILNKFQDTVFTCEYKYDGERAQVHCMEDGTFEIYSRNAERNTGKYPDVALALSRLKKPSVKSFILDCEVVAFDREKKKILPFQILSTRARKNVNVNDIKVGVCIFAFDMLYLNGQQLIQENLNIRREKLYESFEEDPGYFQFATTLTSSDIDEIQKFLDASVDIGCEGLIIKTLNSDATYEPAKRSNNWLKLKKDYMDSIGDSVDLVPIAAFHGRGKRTGVFGAFLLACYDADKEEFQSICKIGTGFSEAVLEERSTSLRSRVIATPKQYYRVGDSLNPDVWFEPTEVWEVKAADLTISPVHRAATGIVDPDKGISLRFPRLLRVREDKKPEEATSSEQIADMYQAQKHNH 722          
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy TrEMBL
Match: A0A087HLW6_ARAAL (DNA ligase OS=Arabis alpina GN=AALP_AA1G082300 PE=3 SV=1)

HSP 1 Score: 1031.94 bits (2667), Expect = 0.000e+0
Identity = 528/738 (71.54%), Postives = 616/738 (83.47%), Query Frame = 1
Query:  310 STRPSAFDALMSNARRLAGXXXXXXXXXXXXXXXXXXXXTQNPNPPKTVGSTEVKHDPEVSSDGIGKPINDSPKPDLDEAKKTPDSKKV----KVGSTSERNAEMKGKIGLLKKKPADFDPNMVACWEKGERVPFLFLSLAFDLISNETGRIVITDIVCNMFRTVIATTPDDLVATVYLAANKVAPAHEGLELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQASRSSQSMMRKPDPLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVYNEQHSKPPPNVQSPLEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEIKVDVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRDATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEPKSYYRCSEMMKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLVRVREDKTPEQASSSEQVAEMYNAQKHNQ 2511
            S+RPSAFDALMS AR  A KK+  +S+P++         TQ+ +  K + S       E+        ++DS KP  D      +SK V    +V S S++  E+K KI LLKKKP DF P  V+CWEKGERVPFLF++LAFDLISNE+GRIVITDI+CNM RTVIATTPDDLVATVYLAAN++APAHEG+ELGIG+ SIIKA++EA GRTE+QVK    + GDLGLVA+ SRSSQ+MM KP+PLTV+KVF+TF+ IAKESGKDS EKKK+R+K+LLVAATDCEP YL RLLQ KLR+GFS QT+LAALGQAAVYNE+HSKPPP  +SPLEEAAKIVKQVF++LPVYD IVPALLTGGVW+LPK+C FT GVP+GPMLAKPTKGV EI+NKFQD  F CEYKYDGERAQ+H ME+G+ EIYSRNAE NTGK+PDV  A+SR KK SVKSF+LDCE+VA+DR +KKILPFQILSTRARKNV V++IKV VCIFAFD+LYL+GQ L+ E LK+R+E+LYDSFEE+PG+FQFATALTS+D++EIQ FL+++V   CEGLIIKTLD DATYEP+KRS NWLKLKKDYM+SIGD++DLVPIAAFHGRGKRTG +GAFLLACYD + EE+QSICKIGTGFSEA LEERS SLRSKVI  PK YYR  + + PDVWFE +EVWEVKAADLTISPVHRAA GIVDP KGISLRFPRL+RVREDK PE A+SSEQ+A+MY AQKHN 
Sbjct:    3 SSRPSAFDALMSKARESAKKKTPQASTPSRSPNKRKIGETQDADLGKALVSEGTVSKIEI--------VSDSEKPRSDSVSIAEESKNVAKKPRVLSQSDKVMELKSKIELLKKKPGDFKPEKVSCWEKGERVPFLFVALAFDLISNESGRIVITDILCNMLRTVIATTPDDLVATVYLAANEIAPAHEGIELGIGEGSIIKAISEAFGRTEAQVKKLNTELGDLGLVAKGSRSSQTMMFKPEPLTVVKVFNTFRQIAKESGKDSTEKKKDRMKALLVAATDCEPLYLTRLLQAKLRLGFSNQTVLAALGQAAVYNEEHSKPPPTTKSPLEEAAKIVKQVFTVLPVYDIIVPALLTGGVWNLPKTCNFTLGVPIGPMLAKPTKGVGEILNKFQDTVFTCEYKYDGERAQVHCMEDGTFEIYSRNAERNTGKYPDVALALSRLKKPSVKSFILDCEVVAFDREKKKILPFQILSTRARKNVNVNDIKVGVCIFAFDMLYLNGQQLIQENLKIRREKLYDSFEEDPGYFQFATALTSSDIDEIQKFLDASVDIGCEGLIIKTLDSDATYEPAKRSNNWLKLKKDYMDSIGDSVDLVPIAAFHGRGKRTGVFGAFLLACYDVDKEEYQSICKIGTGFSEAVLEERSTSLRSKVIATPKQYYRVGDSLNPDVWFEPTEVWEVKAADLTISPVHRAATGIVDPVKGISLRFPRLLRVREDKKPEDATSSEQIADMYQAQKHNH 732          
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy TrEMBL
Match: A0A078E250_BRANA (DNA ligase OS=Brassica napus GN=BnaA06g04600D PE=3 SV=1)

HSP 1 Score: 1029.62 bits (2661), Expect = 0.000e+0
Identity = 523/738 (70.87%), Postives = 612/738 (82.93%), Query Frame = 1
Query:  310 STRPSAFDALMSNARRLAGXXXXXXXXXXXXXXXXXXXXTQNPNPPKTVGSTEVKHDPEVSSDGIGKPINDSPKPDLDEAKKTPDSKKVKVGSTS----ERNAEMKGKIGLLKKKPADFDPNMVACWEKGERVPFLFLSLAFDLISNETGRIVITDIVCNMFRTVIATTPDDLVATVYLAANKVAPAHEGLELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQASRSSQSMMRKPDPLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVYNEQHSKPPPNVQSPLEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEIKVDVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRDATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEPKSYYRCSEMMKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLVRVREDKTPEQASSSEQVAEMYNAQKHNQ 2511
            S+RPSAFDALMSNAR  A KK +                 Q  NPP++    +++   +  SD +    +DS KP  D      DSKK    S S    ++  EMK KI LLKKKP +FDP  V+CWEKGERVPFLF++LAFDLIS E+GRIVITDI+CNM RTVIATTPDDLVATVYL+AN++APAHEG+ELGIG+ SIIKA++EA GRTESQVK    + GDLGLVA+ SRSSQ+MM KP+ LTV+KVF+TF+ IAKESGKDS EKKK+R+K+LLVAATDCEP YL RLLQ KLR+GFS QT+LAALGQAAVYNE+HSKPPP+ +SPLEEAAKIVKQVF++LPVYD IVPALL+GGVW+LPK+C FT GVP+GPMLAKPTKGV EI+NKFQD  F CEYKYDGERAQ+H ME+G+ EIYSRNAE NTGK+PDV  A+SR KK SVKSF+LDCE+VA+DR +KKILPFQILSTRARKNV V++IKV VCIFAFD+LYL+GQ L+ E L +R+E+LY+SFEE+PG+FQFAT LTS+D++EIQ FL+++V   CEGLIIKTL+ DATYEP+KRS NWLKLKKDYM+SIGD++DLVPIAAFHGRGKRTG +GAFLLACYD + EEFQSICKIGTGFSEA LEERS SLRS+VI  PK YYR  + + PDVWFE +EVWEVKAADLTISPVHRAA GIVDPDKGISLRFPRL+RVREDK PE+A+SSEQ+A+MY AQKHN 
Sbjct:    3 SSRPSAFDALMSNARASAAKKKT----------------PQASNPPRSPNKRKIEKTQD--SDLVKTEASDSAKPGSDPPSIAEDSKKGAKKSRSLTQTDKIEEMKSKIALLKKKPGEFDPERVSCWEKGERVPFLFIALAFDLISAESGRIVITDILCNMLRTVIATTPDDLVATVYLSANEIAPAHEGVELGIGEGSIIKAISEAFGRTESQVKKLNTELGDLGLVAKGSRSSQTMMFKPESLTVVKVFNTFRQIAKESGKDSTEKKKDRMKALLVAATDCEPLYLTRLLQAKLRLGFSNQTVLAALGQAAVYNEEHSKPPPSTKSPLEEAAKIVKQVFTVLPVYDIIVPALLSGGVWNLPKTCNFTLGVPIGPMLAKPTKGVGEILNKFQDTVFTCEYKYDGERAQVHCMEDGTFEIYSRNAERNTGKYPDVALALSRLKKPSVKSFILDCEVVAFDREKKKILPFQILSTRARKNVNVNDIKVGVCIFAFDMLYLNGQQLIQENLNIRREKLYESFEEDPGYFQFATTLTSSDIDEIQKFLDASVDIGCEGLIIKTLNSDATYEPAKRSNNWLKLKKDYMDSIGDSVDLVPIAAFHGRGKRTGVFGAFLLACYDADKEEFQSICKIGTGFSEAVLEERSTSLRSRVIATPKQYYRVGDSLNPDVWFEPTEVWEVKAADLTISPVHRAATGIVDPDKGISLRFPRLLRVREDKKPEEATSSEQIADMYQAQKHNH 722          
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy TrEMBL
Match: A0A078EW74_BRANA (DNA ligase OS=Brassica napus GN=BnaA09g49030D PE=3 SV=1)

HSP 1 Score: 1025 bits (2649), Expect = 0.000e+0
Identity = 542/797 (68.01%), Postives = 640/797 (80.30%), Query Frame = 1
Query:  145 MLTFRPSHLLRYTCCITRPLTPLLPPFSSHILPSN---SPFFRPKPXXXXXXNPHSNMSTRPSAFDALMSNARRLAGXXXXXXXXXXXXXXXXXXXXTQNPNPPK-TVGSTEVKHDP--EVSSDGIGKPINDSPK--PDLDEAKKTPDSKKVKVGSTSERNAEMKGKIGLLKKKPADFDPNMVACWEKGERVPFLFLSLAFDLISNETGRIVITDIVCNMFRTVIATTPDDLVATVYLAANKVAPAHEGLELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQASRSSQSMMRKPDPLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVYNEQHSKPPPNVQSPLEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEIKVDVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRDATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEPKSYYRCSEMMKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLVRVREDKTPEQASSSEQVAEMYNAQKHNQ 2511
            ML  R S+  R   CI+   T     FSS ++  N   SPF      S S L+  +  S+RPSAFDALMSNAR  A            K+K+   +   +P+P K  +  T+    P  E  SD   KP +DSP    DL +  KT D+   K    +++  E+K +I LLK+KP +FDP  VACWEKGERVPFLF++LAFDL+S E+GRIVITDI+CNM RTVIATTPDDLVA VYLAAN++APAHEG+ELGIG+ SIIKA++EA GRTE+QVK    + GDLGLVA+ SRSSQ+MM KP+PLTV+KVF+TF+ IAKESGKDS EKKK+R+K+LLVAATDCEP YL RLLQ KLR+GFS QT+LAALGQAAVYNE+HSKPPP  +SPLEEAAKIVKQVF++LPVYD IVPALLTGGVW+LPK+C FT GVP+GPMLAKPTKGV EI+NKFQD  F CEYKYDGERAQ+H ME+G+ EIYSRNAE NTGK+PDV  A+SR KK SVKSF+LDCE+VA+DR +KKILPFQILSTRARKNV V++IKV VCIFAFD+LYL+GQ L+ E L +R+E+LY SFEE+PG+FQFATALTS+D++EIQ FL+++V   CEGLIIKT++ DATYEP+KRS NWLKLKKDYM+SIGD++DLVPIAAFHGRGKRTG +GAFLLACYD + EEFQSICKIGTGFSEA LEERS SLRS+VIP PK YYR  + + PDVWFE +EVWEVKAADLTISPVHRAA GIVDPDKGISLRFPRL+RVREDK PE+A+SSEQ+A+MY AQKHN 
Sbjct:    1 MLAIRSSNHFR---CISSLCTKTR--FSSVLVSLNRQVSPF-----PSSSRLHHRAMSSSRPSAFDALMSNARASA------------KKKTTPQASNSSPSPNKRKISKTQDADSPKAEAFSDS-PKPRSDSPSIAEDLKKGAKTQDADLTK----TDKVDELKSRIVLLKRKPGEFDPERVACWEKGERVPFLFVALAFDLVSAESGRIVITDILCNMLRTVIATTPDDLVAAVYLAANEIAPAHEGVELGIGEGSIIKAISEAFGRTEAQVKKLNTELGDLGLVAKGSRSSQTMMFKPEPLTVVKVFNTFRQIAKESGKDSTEKKKDRMKALLVAATDCEPLYLTRLLQAKLRLGFSNQTVLAALGQAAVYNEEHSKPPPKTKSPLEEAAKIVKQVFTVLPVYDIIVPALLTGGVWNLPKTCNFTLGVPIGPMLAKPTKGVGEILNKFQDTVFTCEYKYDGERAQVHCMEDGTFEIYSRNAERNTGKYPDVALALSRLKKPSVKSFILDCEVVAFDREKKKILPFQILSTRARKNVNVNDIKVGVCIFAFDMLYLNGQQLIQENLDIRREKLYGSFEEDPGYFQFATALTSSDIDEIQKFLDASVDIGCEGLIIKTMNSDATYEPAKRSNNWLKLKKDYMDSIGDSVDLVPIAAFHGRGKRTGVFGAFLLACYDADKEEFQSICKIGTGFSEAVLEERSTSLRSRVIPTPKQYYRVGDSLNPDVWFEPTEVWEVKAADLTISPVHRAANGIVDPDKGISLRFPRLLRVREDKKPEEATSSEQIADMYQAQKHNH 770          
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy TrEMBL
Match: M4ES34_BRARP (DNA ligase OS=Brassica rapa subsp. pekinensis GN=Bra031612 PE=3 SV=1)

HSP 1 Score: 1022.69 bits (2643), Expect = 0.000e+0
Identity = 528/758 (69.66%), Postives = 619/758 (81.66%), Query Frame = 1
Query:  310 STRPSAFDALMSNARRLAGXXXXXXXXXXXXXXXXXXXXTQNPNPPK-TVGSTEVKHDP--EVSSDGIGKPINDSPK--PDLDEAKKTPDS-------------------KKVKVGSTSERNAEMKGKIGLLKKKPADFDPNMVACWEKGERVPFLFLSLAFDLISNETGRIVITDIVCNMFRTVIATTPDDLVATVYLAANKVAPAHEGLELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQASRSSQSMMRKPDPLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVYNEQHSKPPPNVQSPLEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEIKVDVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRDATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEPKSYYRCSEMMKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLVRVREDKTPEQASSSEQVAEMYNAQKHNQ 2511
            S+RPSAFDALMSNAR  A            K+K+   +   +P+P K  +  T+    P  E  SD   KP +DSP    DL +  KT D+                   KK +  S +++  E+K +I LLK+KP +FDP  VACWEKGERVPFLF++LAFDL+S E+GRIVITDI+CNM RTVIATTPDDLVA VYLAAN++APAHEG+ELGIG+ SIIKA++EA GRTE+QVK    + GDLGLVA+ SRSSQ+MM KP+PLTV+KVF+TF+ IAKESGKDS EKKK+R+K+LLVAATDCEP YL RLLQ KLR+GFS QT+LAALGQAAVYNE+HSKPPP  +SPLEEAAKIVKQVF++LPVYD IVPALLTGGVW+LPK+C FT GVP+GPMLAKPTKGV EIINKFQD  F CEYKYDGERAQIH ME+G+ EIYSRNAE NTGK+PDV  A+SR KK SVKSF+LDCE+VA+DR +KKILPFQILSTRARKNV V++IKV VCIFAFD+LYL+GQ L+ E L +R+E+LY SFEE+PG+FQFATALTS+D++EIQ FL+++V   CEGLIIKT++ DATYEP+KRS NWLKLKKDYM+SIGD++DLVPIAAFHGRGKRTG +GAFLLACYD + EEFQSICKIGTGFSEA LEERS SLRS+VIP PK YYR  + + PDVWFE +EVWEVKAADLTISPVHRAA GIVDPDKGISLRFPRL+RVREDK PE+A+SSEQ+A+MY AQKHN 
Sbjct:    3 SSRPSAFDALMSNARASA------------KKKTTPQASNSSPSPNKRKISKTQDADSPKAEAFSDS-PKPRSDSPSIAEDLKKGAKTQDADLTKVEAFSDSAKPRSSIAKKSRTLSQTDKVDELKSRIVLLKRKPGEFDPERVACWEKGERVPFLFVALAFDLVSAESGRIVITDILCNMLRTVIATTPDDLVAAVYLAANEIAPAHEGVELGIGEGSIIKAISEAFGRTEAQVKKLNTELGDLGLVAKGSRSSQTMMFKPEPLTVVKVFNTFRQIAKESGKDSTEKKKDRMKALLVAATDCEPLYLTRLLQAKLRLGFSNQTVLAALGQAAVYNEEHSKPPPKTKSPLEEAAKIVKQVFTVLPVYDIIVPALLTGGVWNLPKTCNFTLGVPIGPMLAKPTKGVGEIINKFQDTVFTCEYKYDGERAQIHCMEDGTFEIYSRNAERNTGKYPDVALALSRLKKPSVKSFILDCEVVAFDREKKKILPFQILSTRARKNVNVNDIKVGVCIFAFDMLYLNGQQLIQENLDIRREKLYGSFEEDPGYFQFATALTSSDIDEIQKFLDASVDIGCEGLIIKTMNSDATYEPAKRSNNWLKLKKDYMDSIGDSVDLVPIAAFHGRGKRTGVFGAFLLACYDADKEEFQSICKIGTGFSEAVLEERSTSLRSRVIPTPKQYYRVGDSLNPDVWFEPTEVWEVKAADLTISPVHRAANGIVDPDKGISLRFPRLLRVREDKKPEEATSSEQIADMYQAQKHNH 747          
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy Swiss-Prot
Match: DNLI3_SCHPO (DNA ligase 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=adl1 PE=3 SV=1)

HSP 1 Score: 423.705 bits (1088), Expect = 3.081e-131
Identity = 250/681 (36.71%), Postives = 389/681 (57.12%), Query Frame = 1
Query:  499 GIGKPINDSPKPDLDEAKKTPDSKKVKVGSTSERNAEMKGKIGLLKKKPADFDPNMVACWEKGERVPFLFLSLA--FDLISNETGRIVITDIVCNMFRTVIATTPDDLVATVYLAANKVAPAHEGLELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQASRSSQSMMRKPDPLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVY----NEQHSKPPPNVQSPLEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEIKVDVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRD-----ATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEP-KSYYRCSEMMK--PDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLVRVREDKTPEQASSSEQVAEMYNAQ 2499
             + K  ND PK +L     T +  K    ST   N +       L+K P  +  +  A +   +   F + SLA  F LIS+   RI I  ++ N   T++   PD L+ATV+L  N +AP   G  LG+G A   KAL E CG T S +K+ +   GD G VA  ++ S   + +P+PLT+ KV+ T   IA  +G  +Q +K    K LL+++   E +Y+ R +   LRIG  + T+LA+L +A       NE  +    ++Q    +  +IVKQ F  +P Y+ +V  LL  G+ +L  +    PG+PV PML   TK +  ++ +  D +F CE+KYDG+RAQIH    G+++I+SR+ E  TG+FPDV+  +++        F+++ ELVA D+   +IL FQ LSTR RK V V++I +DVC+F FDI++ DG+  L   L  R+   ++ F   P  FQF ++L +N+ + IQ F + A+++ CEGL++K L+       +TYEP KR   W+K+K+DY +   ++LDLVPI A++G G++ G++   LLA Y+ +   ++++CK  +GFS+   +E +     +      K  Y   E  K  P ++F   EVWE+K A +T SP ++AA+G++  D+G+S+RFPR +RVR DK PE AS++  +A+MY  Q
Sbjct:   97 NVVKESNDKPKENL----VTSEECKASFFSTDSVNKDSTIDYDALQKDPLTYVKSCRARFVSKDTKSFSYSSLANTFSLISSTKSRIRIVTLLTNFLLTLLYADPDSLIATVWLCTNSIAPNFYGKNLGVGPAMYSKALKEVCGITASALKNLWNKYGDPGDVAFEAKVSVRTLSRPEPLTIKKVYSTLLKIADSNGNGAQNRKLELTKFLLISSNAEEVRYIGRSIMQNLRIGAVQNTMLASLSKAFFIFDNQNEIFNFNSDSLQQQFRQGEEIVKQSFFQVPDYNILVATLLREGIENLKDNMSIRPGIPVKPMLGSITKNLQHMLERLTDHNFSCEFKYDGQRAQIHCDRLGNIKIFSRHLEEITGRFPDVI-EVAQLALKHSCDFIIEGELVAIDKSNGQILDFQKLSTRERKKVTVADITIDVCVFVFDIMFCDGKSCLQMPLIERRRMFFEHFNLIPNRFQFVSSLETNEEQSIQEFFSLAITNKCEGLMVKVLNGTNSKFPSTYEPDKRGEGWIKVKQDYDDEF-ESLDLVPIGAWYGNGRKAGWFSPILLAVYNPDTGAYEAVCKCMSGFSDQFYKELTQKYSLESGNSSLKPIYNFCETGKVTPQIYFAPQEVWEIKGAQITSSPAYKAALGLIQDDRGLSIRFPRFIRVRSDKGPEDASTNSILADMYMKQ 771          
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy Swiss-Prot
Match: DNLI_PYRCJ (DNA ligase OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=lig PE=3 SV=1)

HSP 1 Score: 337.806 bits (865), Expect = 2.017e-101
Identity = 213/598 (35.62%), Postives = 330/598 (55.18%), Query Frame = 1
Query:  730 ISNETGRIVITDIVCNMFRTVIATTPDDLVATVYLAANKVAPAHEGLELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQ-----ASRSSQSMMRKPDPLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVYNEQHSKPPPNVQSPLEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEIKV-DVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRDATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEPKSYYRCSEMMKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLV-RVREDKTPEQASSSEQVAEMYNAQK 2502
            + + T R  +  ++ ++F+      P+++   VY     + P  EG+ELG+ +   I+A+++A G + ++++  YK  GD+G VA+       R +     +  PL V +V+DT   +AK +G+ +Q+ K + + SL   A+  E +Y+ R +  KLR+G ++ TL+ AL +A   +++  +   +V   L    ++ + V    P+                 +    TPGVPV PMLA+     +EI+ K      ICEYKYDGERAQIH +  GSV+I+SR  E  T  +PDV  A+    K+      L+ E+VA D    ++LPFQ L  R RK+ V   ++     ++ FD+LY+DG+ L  + L  R+ RL +  EE  G    A     +  E++ +F + AVS   EGLI K+    +TYE   R  NW+K K+DY   + DT+DLV + AFHGRGKR G YGAFLLA YD + + F ++CK+G+GF++A+L      L+   IP    + R    M+PDVWF    V EV  A++T+SP+H   IG V P  G+++RFPR   R R DK PE A++++++ EMY  QK
Sbjct:   13 VESTTQRTTMVKLLTSLFKK---AKPEEIDKIVYFILGDLRPPWEGVELGVAEKLCIRAISKATGLSAAELEGWYKKSGDVGEVARRALAAGKRPTLLAFAQQKPLEVAEVYDTLLKVAKAAGEGAQDLKVSLLSSLFSRASPEEAKYIARFVVGKLRLGVADMTLIEALSEAFGVSKEGLERAYHVYPDL---GRLARHVAEGRPL-----------------EEIKITPGVPVLPMLAQRLSSASEILAKLGGTA-ICEYKYDGERAQIH-LREGSVKIFSRRLEDITHAYPDVAKAVKEAVKAREAI--LEGEIVAVDPDTGEMLPFQELMHRKRKHDVAEAMEAYPAVLYLFDLLYVDGEDLTTQPLIYRRLRLSEVVEE-GGDVYIAKWGMFDGAEDVDLFFHEAVSLGTEGLICKS--PTSTYEMGARGWNWIKYKRDYRSEMIDTVDLVVVGAFHGRGKRAGLYGAFLLAAYDPSTDMFYTVCKVGSGFTDADLRRMYDMLQPLKIPH--RHPRVVSKMQPDVWFVPQVVIEVIGAEITLSPLHTCCIGAVKPGVGLAIRFPRFTGRYRTDKRPEDATTTKELVEMYQRQK 578          
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy Swiss-Prot
Match: DNLI_PYRIL (DNA ligase OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=lig PE=3 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 1.085e-100
Identity = 215/601 (35.77%), Postives = 335/601 (55.74%), Query Frame = 1
Query:  730 ISNETGRIVITDIVCNMFRTVIATTPDDLVATVYLAANKVAPAHEGLELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQASRSSQSMMRKPD--------PLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVYNEQHSKPPPNVQSPLEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEIKV-DVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRDATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEPKSYYRCSEMMKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLV-RVREDKTPEQASSSEQVAEMYNAQK 2502
            + + T R  +  ++ ++F+      P+++   +Y     + P  EG+ELG+ +   ++A+++A G + S++++ YK  GD+G   +A+R + S  ++P         PL V +V+DT   +A+ SG+ +Q+ K + + SL   A+  E +Y+ R +  KLR+G ++ TL+ AL  A   +++           LE A       + I P   K+   +  G   +  K    TPGVPV PMLA+     +EI+ K      ICEYKYDGERAQIH ++ G V+I+SR  E  T  +PDVV A+     +      L+ E+VA D     +LPFQ L  R RK+ V   +++  V +  FD+LY+DG+ L +E L  R+ RL +  +E       A     +D EEI +F + AVS   EGL+ K+    + YE   R  NW+K K+DY   + DT+DLV + AF+GRGKR G YGAFLLA YD   + F ++CK+G+GF++A+L++    L+   IP    + R    M+PDVWF    V EV  A++T+SP+H   +G V P  G+++RFPR   R R DK+PEQA++  ++ E+Y  QK
Sbjct:   13 VESTTQRTTMVKLLTSLFKK---ARPEEIDKIIYFVLGDLRPPWEGVELGVAEKLCLRAVSKATGVSISELEALYKKTGDVG---EAARKALSTAKRPGLLAFGQQKPLEVSEVYDTLLKVAQASGEGAQDMKISLLASLFAKASPEEAKYIARFVVGKLRLGVADMTLIEALSDAFGVDKE----------ALERA-------YHIYPDLGKLARHVAEGRPLEEIK---ITPGVPVLPMLAQRLSSSSEILAKLGG-SAICEYKYDGERAQIH-LKEGVVKIFSRRLEDITHAYPDVVKAVREAVSAREAI--LEGEIVAIDPDTGDMLPFQELMHRKRKHEVAVAVEMYPVVLNLFDLLYIDGEDLTNEPLIYRRVRLSEVVQETEKV-SIAKWRVFDDAEEIDVFFHEAVSLGMEGLVCKS--PTSVYEMGARGWNWIKYKRDYKSEMIDTVDLVVVGAFYGRGKRAGLYGAFLLAAYDPATDMFYTVCKVGSGFTDADLKKMYEMLQPYKIPH--RHPRVVSKMEPDVWFTPQVVIEVIGAEITLSPLHTCCLGAVKPGVGLAIRFPRFTGRYRTDKSPEQATTVSEMIELYKRQK 578          
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy Swiss-Prot
Match: DNLI_PYRAR (DNA ligase OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=lig PE=3 SV=1)

HSP 1 Score: 334.724 bits (857), Expect = 2.382e-100
Identity = 214/605 (35.37%), Postives = 339/605 (56.03%), Query Frame = 1
Query:  718 AFDLISNETGRIVITDIVCNMFRTVIATTPDDLVATVYLAANKVAPAHEGLELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQASRSSQSMMRKPD--------PLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVYNEQHSKPPPNVQSPLEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEIKV-DVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRDATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEPKSYYRCSEMMKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLV-RVREDKTPEQASSSEQVAEMYNAQK 2502
            A   + + T R V+  ++ ++F+  +   P+++   +YL    + P  EGLELG+G+   ++ALA+A G ++++++S YK  GD+G   +A+R + +  ++P         PL V +V+D    +A+ +G+ +Q+ K   + SL   ++  E +Y+ R +  KLR+G ++ T++ AL  A    ++  +   +V   L   AK+V                  +G   D  K    TPGVPV PMLA+     +EI+ K      ICEYKYDGERAQIH  ++G V I+SR  E  T  +PDVV A+     +      L+ E+VA D    ++LPFQ L  R RK+ V + +++    ++ FDI+Y+DG+ L +E L  R+ +L +   E     Q A     +D + + +F + AVS   EGLI K+    + YE   R  NW+K K+DY   + DT+DLV + AF+GRGKR G YGAFLLA YD +++ F ++CK+G+GF++A+L++    L+   IP    + R S  M+ DVWF    V EV  A++T+SP+H   +G V P  G+++RFPR   R R DK PEQA++  ++ E+Y  QK
Sbjct:    9 ALAAVESTTQRSVMVKLLASLFKKAL---PEEIDKVIYLILGDLRPPWEGLELGVGEKLCLRALAKATGTSQAELESMYKKTGDIG---EAARRALASSKRPGLLAFGSQKPLEVSEVYDALIKVARATGEGAQDMKIALLSSLFARSSPEEGKYIARFVVGKLRLGVADMTIIEALADAYGVRKEDLERAYHVYPDLGHLAKLVA-----------------SGKPLDEVK---VTPGVPVLPMLAQRLSSSSEILAKLGGAA-ICEYKYDGERAQIHISQSG-VRIFSRRLEDITHAYPDVVKAVREAVSAREAI--LEGEIVAVDPDTGEMLPFQELMHRKRKHEVAAAMEMYPTVLYLFDIVYVDGEDLTNEPLIYRRVKLSEIVHESDKV-QIAKWQMFDDPDTVDVFFHEAVSVGTEGLICKS--PTSEYEMGARGWNWIKYKRDYKSEMIDTVDLVVVGAFYGRGKRAGLYGAFLLAAYDPSSDMFYTVCKVGSGFTDADLKKMYEILQPLKIPH--RHPRVSSKMEADVWFVPQVVIEVIGAEITLSPLHTCCLGAVRPGVGLAVRFPRFTGRYRTDKGPEQATTVAEMLELYKRQK 578          
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy Swiss-Prot
Match: DNLI_PYRNV (DNA ligase OS=Pyrobaculum neutrophilum (strain DSM 2338 / JCM 9278 / V24Sta) GN=lig PE=3 SV=1)

HSP 1 Score: 332.413 bits (851), Expect = 1.890e-99
Identity = 215/601 (35.77%), Postives = 328/601 (54.58%), Query Frame = 1
Query:  730 ISNETGRIVITDIVCNMFRTVIATTPDDLVATVYLAANKVAPAHEGLELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQASRSSQSMMRKPD--------PLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVYNEQHSKPPPNVQSPLEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEIKVDVCIF-AFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRDATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEPKSYYRCSEMMKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLV-RVREDKTPEQASSSEQVAEMYNAQK 2502
            + + T R  +  ++ ++ +      PD++   VY     + P  EG+ELG+ +   ++A+++A G   S++++ YK  GD+G   +A+R + S  ++P         PL V +V+DT   +AK +G+ +Q+ K + + SL   AT  E +Y+ R +  KLR+G ++ TLL AL +A    ++           LE A       + + P   K+   +  G   +  K    TPGVPV PMLA+     +EI+ K      +CEYKYDGERAQIH +  GSV+I+SR  E  T  +PDVV A+     +      L+ E+VA D     +LPFQ L  R RK+ V + ++    +   FD+LYLDG+ L  E L  R+ RL +   E       A     +D  E+ +F + AVS   EGL+ K+    + YE   R  NW+K K+DY   + DT+DLV + AF+GRGKR G YGAFLLA YD   + F ++CK+G+GF++A+L++    L+   IP    + R    M PDVWF    V EV  A++T+SP+H   +G V P  G+++RFPR   R R DK+PEQA++  ++ E+Y  QK
Sbjct:   13 VESTTQRTTMVKLLTSLLKR---ARPDEVDKIVYFVLGDLKPPWEGVELGVAEKLCLRAVSKAAGTPLSELEAVYKRTGDVG---EAARRALSAAKRPGLLAFGQQKPLEVSEVYDTLLKVAKAAGEGAQDMKISLLASLFARATPEEAKYIARFVVGKLRLGVADMTLLEALSEAFGVGKE----------ALERA-------YHVWPDMGKLARHVAEGRPLEEVK---ITPGVPVLPMLAQRLSSASEILAKLGGAA-VCEYKYDGERAQIH-ISGGSVKIFSRRLEDITHAYPDVVKAVKESVAAGEAI--LEGEIVAVDPDTGDMLPFQELMHRKRKHEVAAAVESYPAVLNLFDVLYLDGEDLTGEPLIYRRLRLSEVVHETEKV-SIARWRLFDDPGEVDVFFHEAVSLGMEGLVCKS--PTSIYEMGARGWNWIKYKRDYKSEMIDTVDLVVVGAFYGRGKRAGLYGAFLLAAYDPQTDMFYTVCKVGSGFTDADLKKMYEVLQPYKIPH--RHPRVVSKMTPDVWFTPQVVIEVIGAEITLSPLHTCCLGAVRPGVGLAIRFPRFTGRYRTDKSPEQATTPAEMVELYKRQK 578          
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy Swiss-Prot
Match: DNLI_PYRAE (DNA ligase OS=Pyrobaculum aerophilum (strain ATCC 51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827) GN=lig PE=3 SV=2)

HSP 1 Score: 329.717 bits (844), Expect = 1.872e-98
Identity = 212/605 (35.04%), Postives = 331/605 (54.71%), Query Frame = 1
Query:  718 AFDLISNETGRIVITDIVCNMFRTVIATTPDDLVATVYLAANKVAPAHEGLELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQASRSSQSMMRKPD--------PLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVYNEQHSKPPPNVQSPLEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEIKV-DVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRDATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEPKSYYRCSEMMKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLV-RVREDKTPEQASSSEQVAEMYNAQK 2502
            A   I   T R  +  ++ ++F+     +P+++   VY     + P  EG+ELG+ +   ++A+++A G   S++++ YK  GD+G   +A+R + +  ++P         PL V +V+DT   +A+ +G+ +Q+ K   + SL   AT  E +Y+ R +  KLR+G ++ T++ AL  A   N++           LE+A       + I P   ++   +  G   D       TPGVPV PMLA+     +EI+ K      ICEYKYDGERAQIH +  G V+I+SR  E  T  +PDVV A+     +      L+ E+VA D     +LPFQ L  R RK+ V + +++    ++ FD+LY+DG+ L  E L  R+ RL +   E       A     ++ E + +F + +VS   EGLI K+    + YE   R  NW+K K+DY   + DT+DLV + AFHGRGKR G YGAFLLA YD + + F ++CK+G+GF++A+L++    L+   IP    + R    M+ DVWF    V EV  A++T+SP+H   +G V P  G+++RFPR   R R DK+PEQA++  ++ E+Y  QK
Sbjct:    9 ALAAIEATTQRTTMVKLLVSLFKK---ASPEEVGKIVYFILGDLRPPWEGVELGVAEKLCLRAVSKATGAAVSELEALYKKTGDVG---EAARRALAASKRPGLLAFGSQKPLEVSEVYDTLLKVARATGEGAQDMKVALLSSLFARATPEEGKYIARFVVGKLRLGVADMTIIEALSDAYGVNKE----------ALEKA-------YHIYPDLGRLAKHVAEGKPLD---EIRITPGVPVLPMLAQRLSSASEILAKLGG-SAICEYKYDGERAQIH-LTPGGVKIFSRRLEDITHAYPDVVKAVKEAVSAKEAI--LEGEIVAVDPDTGDMLPFQELMHRKRKHDVATAVELYPTVLYLFDVLYVDGEDLTEEPLIYRRVRLSEIVCETDKV-SIAKWRIFDNAEAVDVFFHESVSMGTEGLICKS--PSSIYEMGARGWNWIKYKRDYRSEMIDTVDLVVVGAFHGRGKRAGLYGAFLLAAYDPSTDMFYTVCKVGSGFTDADLKKMYEILQPFKIPH--RHPRVVSKMEADVWFVPQVVIEVIGAEITLSPLHTCCLGAVRPGVGLAVRFPRFTGRYRSDKSPEQATTVAEMLELYKRQK 578          
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy Swiss-Prot
Match: DNLI_AERPE (DNA ligase OS=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=lig PE=1 SV=2)

HSP 1 Score: 329.331 bits (843), Expect = 3.401e-98
Identity = 207/582 (35.57%), Postives = 326/582 (56.01%), Query Frame = 1
Query:  796 ATTPDDLVATVYLAANKVAPAHEGL-ELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQA------SRSSQS------MMRKPDPLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVYNEQHSKPPPNVQSPLEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEIK-VDVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRDATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEPKSYYRCSEMMKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLVRVREDKTPEQASSSEQVAEMYNAQ 2499
            +T P  +   VYL   K+ P  +GL ELG+G+  ++KA+A A   TE +V+  YK  GDLG VA+       SR++++      M    + LTV +V++T   IA   G+ S++ K   +  LL  A   E +Y++R ++ +LR+G  + T+L AL  A      H++P             ++++ +++      I   +   GV D  +      GVP+ PMLA+  +  AEI+ K      + EYKYDGERAQIH  ++G V IYSR  E  T  FPDVV    +  K+      ++ E+VA D    +I PFQ+L  R RK+ +   ++ V V +F FD LY+DG+ L  + L  R+ RL +   E P  ++ A ++ ++D EE+  F   A+    EG+++K + RD+ Y    R   W+KLK+DY   + DT+DLV + AF+GRGKR G   + L+A YD + + F ++CK+ TGF++ EL+  +  L+  +I  P+ + R    ++PDVW E + V E+  A+LT+SP+H   +  V P  GIS+RFPR +R R+DK+PE A+++ ++ EMY  Q
Sbjct:   32 STPPGAIGIVVYLIQGKLGPDWKGLPELGVGEKLLVKAIALAYKATEERVERLYKSVGDLGSVAERLSREYRSRAARAVTLEAFMAGGGEALTVRRVYNTLYRIAMAQGEGSRDIKLRLLAGLLADAEPVEAKYIVRFVEGRLRVGVGDATVLDALAMA-FGGGAHARP-------------VIERAYNLRADLGYIAEVVAREGV-DALRGVKPQVGVPIRPMLAERGRDPAEILRKVGG-RAVVEYKYDGERAQIH-KKDGEVYIYSRRLENITRMFPDVVEMARKGLKAGEAI--VEGEIVAVDPDNYEIQPFQVLMQRKRKHDIHRVMREVPVAVFLFDALYVDGEDLTSKPLPERRRRLKEIVVETP-LWRLAESIETSDPEELWTFFLKAIEEGAEGVMVKAVHRDSVYTAGVRGWLWVKLKRDYKSEMMDTVDLVVVGAFYGRGKRGGKLSSLLMAAYDPDRDVFPTVCKVATGFTDEELDRMNEMLKKHII--PRKHPRVESRIEPDVWVEPALVAEILGAELTLSPMHTCCLNTVRPGVGISIRFPRFIRWRDDKSPEDATTTHELLEMYKRQ 591          
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy Swiss-Prot
Match: DNLI_THEAC (DNA ligase OS=Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) GN=lig PE=3 SV=1)

HSP 1 Score: 328.561 bits (841), Expect = 5.151e-98
Identity = 206/611 (33.72%), Postives = 328/611 (53.68%), Query Frame = 1
Query:  700 FLFLSLAFDLISNETGRIVITDIVCNMFRTVIATTPDDLVATVYLAANKVAPAHEGLELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQA---SRSSQSMMRKPDPLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVYNEQHSKPPPNVQSPLEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEI--KVDVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRDATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEPKSYYRCSEMMKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLV-RVREDKTPEQASSSEQVAEMYNAQKHNQT 2514
            F  ++ AF+ + + T R+ +TD++ N+ +       DDL   +YL   K+ P + G+E  + D  IIKAL+ A   +E ++  +Y   GD+G +A+     RS +S+++  + +TV  + DT   +A+ +G  S + + +    L + +T  E  Y+ R++  KLRIG S+ T+L A+ +A   +E++S+               ++  F+  P    I   L  G + D     G TP +P   MLA+  + V EI+ K        EYKYDG R + H +E G V ++SR  E  T +FPD+  A S   K       LD E V YD    ++ PFQ++S R  +   + ++  ++ + +F FDI+YL+G+ L       R++ L   F E   F + A  + S D  E+  F NSA+   CEGL+ K+   D+ Y+   R   W+KLK+DY   + DTLDL  + AF+G G+R G YGA LLA Y++ N+ F+++CK+G+GFS+  L          V  E  +  R    ++PDVWF  + V EV  A++T+SP+H  A G ++ D G+S+RFPR   + REDK PE +++S ++ EMY  QK   T
Sbjct:    3 FSVVADAFEKMESTTKRLELTDLLVNLLKEA----DDDLPLLIYLLEGKLGPDYLGIETQMSDKLIIKALSVASNISEDEIAKEYAKAGDIGTIAKEIAEKRSLRSLVQ--EEMTVKYIHDTLMKMARTTGSGSTKARVDAYMDLFLNSTPKEIMYITRIITGKLRIGISDATILDAIVKAFA-DEKYSED--------------IENAFNFHPDLGYIASELRKGNI-DAILKLGPTPMIPFKVMLAERLRSVEEILEKMGG-RCAFEYKYDGMRTETH-IERGKVRLFSRGNEETTNQFPDITKAASETFKVDSAI--LDGEAVPYDPDTGELYPFQVISHRRGRKYDLDKVSSEIPITVFLFDIVYLNGRDLSKTPYTERRKILESIFTESDSF-RLAKRIESGDPAEVHRFFNSAIEDGCEGLVAKSTSPDSFYKAGARGWLWIKLKRDYQAQLWDTLDLTVVGAFYGHGRRKGTYGALLLATYNDKNDTFETVCKLGSGFSDDVLFSLPKKFEQYVSKEKPA--RVISNLEPDVWFYPAVVMEVIGAEITVSPIHTCAYGEIEKDSGLSVRFPRFTGKWREDKKPEDSTTSREILEMYKEQKKTIT 584          
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy Swiss-Prot
Match: DNLI_PICTO (DNA ligase OS=Picrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828) GN=lig PE=3 SV=2)

HSP 1 Score: 326.635 bits (836), Expect = 2.654e-97
Identity = 198/599 (33.06%), Postives = 336/599 (56.09%), Query Frame = 1
Query:  721 FDLISNETGRIVITDIVCNMFRTVIATTPDDLVATVYLAANKVAPAHEGLELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQASRSSQSMMRKP---DPLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVYNEQHSKPPPNVQSPLEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEI--KVDVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRDATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEPKSYYRCSEMMKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLVRVREDKTPEQASSSEQVAEMYNAQK 2502
            F  +   T R+ +T I+  +F+     + DDL   VYL   K+ P + G+ELG+ D  IIK+L++A GR+E  +   +   GDLG  + A   S S +++P   + LTV  V++    I+  +G  S + K +    LL+ +   E +Y+ R++  KLR+G ++ T+L  L +A  ++E+             + A  ++  ++  P    I   L+ G + +L  + G  P +P   MLA+  + +++I NK    +   EYKYDG R Q+H+++ G ++I+SR  E  T  FPD+V         S  S ++D E V Y+    ++ PFQ++S R  +   ++E   +V + +F FDILYL+G+ L++     R+  L  +F+E   +F+ A  + S+D  +I  F   ++   CEG++ K+   D+ Y    R   W+K K+DY   + D+LDLV + AF G G+R G +GA LLACY+  ++ F+++CK+G+GF++  L E    L  K++ +  +  R +  M+PD W   S V E++ A++T+SPVH  A+ I++   G++LRFPRL++ R+DK PE A+++ ++ EMY AQK
Sbjct:   10 FSRMEETTKRLELTSILAELFKR----SGDDLKKLVYLVQGKLMPDYLGIELGLSDKLIIKSLSKASGRSEEDINRIFSRLGDLG--STAEEISSSGIQRPLLKESLTVDYVYNQLIKISGYTGHGSIKTKMDAYIDLLINSGPMEIKYITRIITGKLRLGVADSTILDGLIEA--FSEK-------------KYADDIETAYNFHPDLGYIAENLMMGNINELL-NAGPVPLIPFKVMLAERLQSISDIRNKMGH-NASYEYKYDGLRTQLHFLKGG-IKIFSRGLEETTSSFPDIVQNFK--SYYSFDSCIIDGESVPYNPETGELYPFQMVSKRRGRKYELTEKTREVPIVMFIFDILYLNGKSLVNLPYPERRSILEKNFKENE-YFKLAKRIVSDDEHDIMKFFERSIEEGCEGIVAKSNGIDSIYRAGARGWLWIKFKRDYQSELSDSLDLVVVGAFDGHGRRKGTFGALLLACYNSKDDTFETVCKLGSGFTDEMLSEMPRLLGDKIVEKKPA--RVNSSMEPDHWIYPSLVLEIRGAEITVSPVHTCAMNIIEKGSGLALRFPRLIKPRDDKKPEDATTTNEIIEMYKAQK 579          
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy Swiss-Prot
Match: DNLI_THEVO (DNA ligase OS=Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) GN=lig PE=3 SV=1)

HSP 1 Score: 320.857 bits (821), Expect = 3.316e-95
Identity = 207/613 (33.77%), Postives = 331/613 (54.00%), Query Frame = 1
Query:  694 VPFLFLSLAFDLISNETGRIVITDIVCNMFRTVIATTPDDLVATVYLAANKVAPAHEGLELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQ---ASRSSQSMMRKPDPLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVYNEQHSKPPPNVQSPLEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEI--KVDVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRDATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEPKSYYRCSEMMKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLV-RVREDKTPEQASSSEQVAEMYNAQKHNQT 2514
            + F  ++ AF+ +S  T R  +T+I+  + ++      +DL + VYL   K+AP ++G+E  + D  IIKAL+      E  V   Y   GD+G VA+   A ++ +S++   + LTV  V DT   +AK SG  S + + +    L ++ T  +  Y+ R++  KLRIG S+ T+L A+   A  +E++S+   N               ++  P    I   L  G +  +  + G TP VP   MLA+  + V EI+ K        EYKYDG R +IH ++   V ++SR  E  TG+FPD+V   S  +   V S +LD E V Y+    ++ PFQ++S R  +   + ++  ++ + +F FDI+Y++G+ L       R+  L   F+E   F + A  + S+D   I  F N A+   CEGL+ K++  D+ Y+   R   W+KLK+DY   + DT+DL  + AF G G+R+G YGA LLA Y+E N+ F+++CK+G+GF++  L          V  E  +  R    ++PDVW   S V E+  A++TISPVH  A GI++ D G+S+RFPR   + R+DK PE +++++++ EMY  QK   T
Sbjct:    1 MKFSLVTDAFEKMSKTTKRTELTEILVELLKSA----DEDLQSLVYLIEGKLAPDYQGIETQMSDKLIIKALSIVSNIPEEAVSETYSKLGDIGSVAREIAAKKNMRSLVN--EDLTVKYVHDTLMRMAKTSGSGSTKARIDAYVDLALSGTPADLMYITRIITGKLRIGVSDATILDAI-ILAFSDEKYSEEIENA--------------YNFHPDLGYIAVQLRLGNLESVI-NMGPTPMVPFKVMLAERLRSVDEIVQKMNG-KCAFEYKYDGMRTEIHIVDE-KVRLFSRGNEETTGQFPDIVK--SAKETFHVSSVILDGEAVPYNPETGELYPFQVISQRRGRKYDLDKVSNEIPITVFLFDIVYINGKDLSKTPYAERRRILEGLFKENDNF-KLAKRIVSSDTGTITKFFNQAIEDGCEGLVAKSMADDSYYKAGARGWLWIKLKRDYQAQLWDTIDLTVVGAFMGHGRRSGTYGALLLATYNEKNDTFETVCKLGSGFTDDVLFSLPKRFAEFVSKEKPA--RVVSTIEPDVWIYPSIVMEIIGAEITISPVHTCAFGIIEKDAGLSIRFPRFTGKWRDDKKPEDSTTTQEIIEMYKEQKKTLT 584          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
M4DQ59_BRARP0.000e+071.00DNA ligase OS=Brassica rapa subsp. pekinensis GN=B... [more]
A0A087HLW6_ARAAL0.000e+071.54DNA ligase OS=Arabis alpina GN=AALP_AA1G082300 PE=... [more]
A0A078E250_BRANA0.000e+070.87DNA ligase OS=Brassica napus GN=BnaA06g04600D PE=3... [more]
A0A078EW74_BRANA0.000e+068.01DNA ligase OS=Brassica napus GN=BnaA09g49030D PE=3... [more]
M4ES34_BRARP0.000e+069.66DNA ligase OS=Brassica rapa subsp. pekinensis GN=B... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
DNLI3_SCHPO3.081e-13136.71DNA ligase 3 OS=Schizosaccharomyces pombe (strain ... [more]
DNLI_PYRCJ2.017e-10135.62DNA ligase OS=Pyrobaculum calidifontis (strain JCM... [more]
DNLI_PYRIL1.085e-10035.77DNA ligase OS=Pyrobaculum islandicum (strain DSM 4... [more]
DNLI_PYRAR2.382e-10035.37DNA ligase OS=Pyrobaculum arsenaticum (strain DSM ... [more]
DNLI_PYRNV1.890e-9935.77DNA ligase OS=Pyrobaculum neutrophilum (strain DSM... [more]
DNLI_PYRAE1.872e-9835.04DNA ligase OS=Pyrobaculum aerophilum (strain ATCC ... [more]
DNLI_AERPE3.401e-9835.57DNA ligase OS=Aeropyrum pernix (strain ATCC 700893... [more]
DNLI_THEAC5.151e-9833.72DNA ligase OS=Thermoplasma acidophilum (strain ATC... [more]
DNLI_PICTO2.654e-9733.06DNA ligase OS=Picrophilus torridus (strain ATCC 70... [more]
DNLI_THEVO3.316e-9533.77DNA ligase OS=Thermoplasma volcanium (strain ATCC ... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012308DNA ligase, ATP-dependent, N-terminalGENE3D1.10.3260.10coord: 166..429
e-value: 3.3E-95
score: 318.1
IPR012308DNA ligase, ATP-dependent, N-terminalPFAMPF04675DNA_ligase_A_Ncoord: 185..360
e-value: 2.1E-39
score: 135.5
IPR012308DNA ligase, ATP-dependent, N-terminalSUPERFAMILY117018ATP-dependent DNA ligase DNA-binding domaincoord: 168..417
IPR000977DNA ligase, ATP-dependentTIGRFAMTIGR00574TIGR00574coord: 243..782
e-value: 3.9E-153
score: 508.9
IPR012310DNA ligase, ATP-dependent, centralPFAMPF01068DNA_ligase_A_Mcoord: 427..631
e-value: 1.7E-62
score: 210.5
IPR012310DNA ligase, ATP-dependent, centralPROSITEPS50160DNA_LIGASE_A3coord: 533..669
score: 42.615
IPR012309DNA ligase, ATP-dependent, C-terminalPFAMPF04679DNA_ligase_A_Ccoord: 656..767
e-value: 2.1E-24
score: 85.8
NoneNo IPR availableGENE3D3.30.470.30coord: 457..580
e-value: 2.1E-39
score: 133.6
NoneNo IPR availableGENE3D3.30.1490.70coord: 430..456
e-value: 1.5E-29
score: 101.0
coord: 583..638
e-value: 1.5E-29
score: 101.0
NoneNo IPR availablePANTHERPTHR10459DNA LIGASEcoord: 176..795
NoneNo IPR availablePANTHERPTHR10459:SF10DNA LIGASE 1coord: 176..795
NoneNo IPR availableSUPERFAMILY56091DNA ligase/mRNA capping enzyme, catalytic domaincoord: 419..637
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 640..785
e-value: 6.8E-58
score: 194.6
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 639..785
IPR016059DNA ligase, ATP-dependent, conserved sitePROSITEPS00697DNA_LIGASE_A1coord: 451..459
IPR016059DNA ligase, ATP-dependent, conserved sitePROSITEPS00333DNA_LIGASE_A2coord: 605..631

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0020740 ID=g.arboreum_cottongen_reftransV1_0020740; Name=g.arboreum_cottongen_reftransV1_0020740; organism=Gossypium arboreum; type=contig; length=3157bp
ATGGAGGGGGAATTCCATTTCCATATAAAAAGTTTGATCACACTTCCCGC
CATTTCTCTAAATCATCTTTCAAAGCTTTCCCAGCACTTTTCTCTATCCG
ATTCTATTGTGCGTGTGTGTTTTGTTTCATTTCATTCCAATTGAATGCTA
ACGTTTCGCCCATCCCATCTTCTCCGCTATACTTGTTGTATTACTCGTCC
TCTCACCCCTCTCCTTCCTCCCTTTTCCTCCCATATCCTTCCTTCCAACT
CGCCTTTCTTTCGCCCCAAACCCCTCTCTCTTTCTTCCTTAAACCCTCAC
TCCAACATGTCCACTCGCCCCTCCGCCTTCGATGCTTTAATGTCTAATGC
TCGCCGTTTAGCCGGTAAGAAGAGCTCTTCCTCTTCTTCGCCCACCAAGA
AACGCAAATCCCCCGATTCGTCGCCCACCCAAAACCCTAATCCCCCCAAA
ACCGTCGGCTCCACTGAAGTCAAGCACGACCCAGAGGTTTCTAGTGATGG
AATCGGAAAGCCCATTAACGATTCCCCAAAACCCGATTTAGATGAGGCGA
AGAAAACCCCGGATTCGAAGAAGGTGAAGGTGGGGAGCACCTCCGAGAGA
AACGCGGAGATGAAAGGGAAAATTGGTTTGTTGAAGAAGAAGCCGGCGGA
TTTTGATCCCAATATGGTGGCGTGTTGGGAGAAAGGAGAGAGGGTGCCGT
TTTTGTTTCTGAGCCTGGCGTTTGATTTGATATCCAATGAGACGGGTCGG
ATTGTGATAACGGATATTGTTTGCAATATGTTTAGGACTGTTATTGCTAC
CACGCCGGATGATTTGGTGGCGACGGTTTACTTGGCAGCAAATAAGGTTG
CTCCGGCGCACGAGGGGTTAGAGCTGGGAATCGGTGATGCATCCATTATC
AAGGCCCTAGCTGAGGCCTGTGGGAGGACTGAATCACAGGTTAAGAGTCA
GTACAAGGATAAAGGGGACCTGGGCCTTGTTGCACAGGCTAGCCGTTCAT
CTCAATCAATGATGCGCAAGCCTGATCCATTGACTGTTATCAAAGTGTTT
GACACGTTTCAGCTAATTGCTAAGGAATCTGGAAAGGATAGTCAGGAGAA
GAAAAAGAATCGTATCAAATCACTTCTTGTTGCTGCAACTGACTGTGAAC
CTCAGTATTTGATTCGTCTGCTTCAGACAAAGCTGCGGATTGGATTTTCA
GAGCAGACTCTGTTAGCTGCATTAGGACAGGCTGCTGTATATAATGAACA
ACATTCTAAACCACCTCCAAATGTTCAGTCTCCTTTAGAGGAGGCTGCTA
AGATTGTCAAACAAGTTTTTTCTATCCTTCCAGTCTATGATAAAATAGTC
CCAGCACTCTTGACTGGTGGTGTATGGGATCTGCCTAAGAGTTGTGGCTT
TACGCCGGGTGTTCCCGTTGGACCTATGCTAGCAAAACCAACCAAAGGTG
TTGCTGAAATCATAAATAAATTCCAGGACATTGACTTCATATGTGAATAT
AAATATGATGGAGAGCGTGCGCAGATACACTATATGGAGAATGGTTCAGT
TGAGATATACAGCCGAAATGCTGAGTGTAACACTGGAAAGTTTCCTGATG
TTGTTGCTGCAATTTCTAGATTTAAGAAGTCCTCTGTAAAATCATTTGTT
TTGGATTGTGAGCTTGTTGCTTATGATCGTGTTCAAAAGAAAATATTACC
CTTTCAGATCCTTAGTACAAGAGCACGGAAAAATGTGGTAGTGAGTGAAA
TAAAAGTTGATGTGTGCATATTCGCTTTTGACATCTTATACCTTGACGGG
CAACCACTTCTTCATGAGCAACTGAAAGTTCGTAAGGAGAGGCTTTATGA
TTCATTTGAGGAAGAACCTGGGTTTTTTCAATTTGCAACAGCCTTAACAT
CAAATGATCTTGAGGAGATTCAAATATTCCTTAATTCTGCTGTTTCTTCA
AGTTGTGAGGGTTTAATTATCAAAACATTGGATAGAGATGCTACATATGA
GCCATCGAAGCGGTCACTCAACTGGCTAAAATTGAAGAAAGACTACATGG
AAAGTATTGGCGACACATTAGATCTAGTACCTATTGCTGCTTTCCATGGC
CGTGGGAAACGAACTGGCTTCTATGGTGCTTTTCTCTTGGCATGTTATGA
TGAAAATAATGAAGAATTCCAGAGTATCTGTAAAATAGGTACTGGATTTT
CTGAAGCAGAGCTTGAGGAACGTTCTGCCAGTCTCCGCTCTAAAGTGATT
CCTGAACCAAAGTCATACTATCGTTGTTCTGAGATGATGAAGCCGGATGT
ATGGTTTGAGACTTCAGAGGTTTGGGAGGTAAAAGCTGCTGACTTGACCA
TTAGCCCTGTTCATCGTGCTGCTATTGGGATTGTGGATCCTGATAAGGGC
ATATCTCTCCGATTTCCACGTTTAGTTCGTGTTCGAGAAGATAAGACACC
AGAGCAAGCTTCATCATCTGAGCAGGTTGCTGAGATGTATAATGCTCAAA
AACACAATCAAACCAATAACGAAGATGATGGTGAGGATGATTGAGGAATT
CTGACAAGCGTCTCAACATTTTTCCTCCCCGAGTAGACCATAATTTCTAC
AAGTGGCGGGACCTAGAAGCCAAGTATCTCTAGTCATATCAGGGTGCCAC
TCATTGGAGGTGGGTTTGAGTCTTCAGTCAAGTAAACCATGCTAGCTTCT
TCATTTCCTAGCCACTGCTGTATGGACTGGACAATTCCATCAGGTTCTTT
TTCGATTTTCTGCCTAATTTTTTCAAGCAAAGTCTTGCATGAACTGCACT
TGGATGCTGCAATCTTTGTTTTTCAGTTAGAAATTTCCTTGAAATTTGAA
AAATCCATGGCTGCTCCTGTTTTTTTTACTGCTTGAATGCTACGATATTT
CCAGTTTCCTTGCGCCTAATCATGGCATAGCTTGGAAGAGCAAAGTTAGC
CCACAATTCGTTATCCATGTTTATACTTAAACCAGTTGGGGATGTCTCAG
AAAAATTTAGGATAAGTAAGAAAATGAAAATGTCATTATCTAGATGCTCT
CTACTTGCACAATGGGCTTGACCTATGTTTGAGGCCTTGCCGAATTTTGA
TGTAACGGGTAAAAGGGGGAGTAGGGTCATGGGAGTATGGATTTTGATAT
TTGCAGG
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR012308DNA_ligase_ATP-dep_N
IPR000977DNA_ligase_ATP-dep
IPR012310DNA_ligase_ATP-dep_cent
IPR012309DNA_ligase_ATP-dep_C
IPR012340NA-bd_OB-fold
IPR016059DNA_ligase_ATP-dep_CS
Vocabulary: Molecular Function
TermDefinition
GO:0003910DNA ligase (ATP) activity
GO:0003677DNA binding
GO:0005524ATP binding
GO:0003909DNA ligase activity
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO:0006310DNA recombination
GO:0071897DNA biosynthetic process
GO:0051103DNA ligation involved in DNA repair