g.arboreum_cottongen_reftransV1_0020740, g.arboreum_cottongen_reftransV1_0020740 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy TrEMBL
Match: M4DQ59_BRARP (DNA ligase OS=Brassica rapa subsp. pekinensis GN=Bra018652 PE=3 SV=1) HSP 1 Score: 1032.71 bits (2669), Expect = 0.000e+0 Identity = 524/738 (71.00%), Postives = 612/738 (82.93%), Query Frame = 1 Query: 310 STRPSAFDALMSNARRLAGXXXXXXXXXXXXXXXXXXXXTQNPNPPKTVGSTEVKHDPEVSSDGIGKPINDSPKPDLDEAKKTPDSKKVKVGSTS----ERNAEMKGKIGLLKKKPADFDPNMVACWEKGERVPFLFLSLAFDLISNETGRIVITDIVCNMFRTVIATTPDDLVATVYLAANKVAPAHEGLELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQASRSSQSMMRKPDPLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVYNEQHSKPPPNVQSPLEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEIKVDVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRDATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEPKSYYRCSEMMKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLVRVREDKTPEQASSSEQVAEMYNAQKHNQ 2511 S+RPSAFDALMSNAR A KK + Q NPP++ +++ + SD + +DS KP D DSKK S S ++ EMK KI LLKKKP +FDP V+CWEKGERVPFLF++LAFDLIS E+GRIVITDI+CNM RTVIATTPDDLVATVYLAAN++APAHEG+ELGIG+ S+IKA++EA GRTESQVK + GDLGLVA+ SRSSQ+MM KP+ LTV+KVF+TF+ IAKESGKDS EKKK+R+K+LLVAATDCEP YL RLLQ KLR+GFS QT+LAALGQAAVYNE+HSKPPPN +SPLEEAAKIVKQVF++LPVYD IVPALL+GGVW+LPK+C FT GVP+GPMLAKPTKGV EI+NKFQD F CEYKYDGERAQ+H ME+G+ EIYSRNAE NTGK+PDV A+SR KK SVKSF+LDCE+VA+DR +KKILPFQILSTRARKNV V++IKV VCIFAFD+LYL+GQ L+ E L +R+E+LY+SFEE+PG+FQFAT LTS+D++EIQ FL+++V CEGLIIKTL+ DATYEP+KRS NWLKLKKDYM+SIGD++DLVPIAAFHGRGKRTG +GAFLLACYD + EEFQSICKIGTGFSEA LEERS SLRS+VI PK YYR + + PDVWFE +EVWEVKAADLTISPVHRAA GIVDPDKGISLRFPRL+RVREDK PE+A+SSEQ+A+MY AQKHN Sbjct: 3 SSRPSAFDALMSNARASAAKKKT----------------PQASNPPRSPNKRKIEKTQD--SDLVKTEASDSAKPGSDSPSIAEDSKKGAKKSRSLTQTDKIEEMKSKIALLKKKPGEFDPERVSCWEKGERVPFLFIALAFDLISAESGRIVITDILCNMLRTVIATTPDDLVATVYLAANEIAPAHEGVELGIGEGSVIKAISEAFGRTESQVKKLNTELGDLGLVAKGSRSSQTMMFKPESLTVVKVFNTFRQIAKESGKDSTEKKKDRMKALLVAATDCEPLYLTRLLQAKLRLGFSNQTVLAALGQAAVYNEEHSKPPPNTKSPLEEAAKIVKQVFTVLPVYDIIVPALLSGGVWNLPKTCNFTLGVPIGPMLAKPTKGVGEILNKFQDTVFTCEYKYDGERAQVHCMEDGTFEIYSRNAERNTGKYPDVALALSRLKKPSVKSFILDCEVVAFDREKKKILPFQILSTRARKNVNVNDIKVGVCIFAFDMLYLNGQQLIQENLNIRREKLYESFEEDPGYFQFATTLTSSDIDEIQKFLDASVDIGCEGLIIKTLNSDATYEPAKRSNNWLKLKKDYMDSIGDSVDLVPIAAFHGRGKRTGVFGAFLLACYDADKEEFQSICKIGTGFSEAVLEERSTSLRSRVIATPKQYYRVGDSLNPDVWFEPTEVWEVKAADLTISPVHRAATGIVDPDKGISLRFPRLLRVREDKKPEEATSSEQIADMYQAQKHNH 722
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy TrEMBL
Match: A0A087HLW6_ARAAL (DNA ligase OS=Arabis alpina GN=AALP_AA1G082300 PE=3 SV=1) HSP 1 Score: 1031.94 bits (2667), Expect = 0.000e+0 Identity = 528/738 (71.54%), Postives = 616/738 (83.47%), Query Frame = 1 Query: 310 STRPSAFDALMSNARRLAGXXXXXXXXXXXXXXXXXXXXTQNPNPPKTVGSTEVKHDPEVSSDGIGKPINDSPKPDLDEAKKTPDSKKV----KVGSTSERNAEMKGKIGLLKKKPADFDPNMVACWEKGERVPFLFLSLAFDLISNETGRIVITDIVCNMFRTVIATTPDDLVATVYLAANKVAPAHEGLELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQASRSSQSMMRKPDPLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVYNEQHSKPPPNVQSPLEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEIKVDVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRDATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEPKSYYRCSEMMKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLVRVREDKTPEQASSSEQVAEMYNAQKHNQ 2511 S+RPSAFDALMS AR A KK+ +S+P++ TQ+ + K + S E+ ++DS KP D +SK V +V S S++ E+K KI LLKKKP DF P V+CWEKGERVPFLF++LAFDLISNE+GRIVITDI+CNM RTVIATTPDDLVATVYLAAN++APAHEG+ELGIG+ SIIKA++EA GRTE+QVK + GDLGLVA+ SRSSQ+MM KP+PLTV+KVF+TF+ IAKESGKDS EKKK+R+K+LLVAATDCEP YL RLLQ KLR+GFS QT+LAALGQAAVYNE+HSKPPP +SPLEEAAKIVKQVF++LPVYD IVPALLTGGVW+LPK+C FT GVP+GPMLAKPTKGV EI+NKFQD F CEYKYDGERAQ+H ME+G+ EIYSRNAE NTGK+PDV A+SR KK SVKSF+LDCE+VA+DR +KKILPFQILSTRARKNV V++IKV VCIFAFD+LYL+GQ L+ E LK+R+E+LYDSFEE+PG+FQFATALTS+D++EIQ FL+++V CEGLIIKTLD DATYEP+KRS NWLKLKKDYM+SIGD++DLVPIAAFHGRGKRTG +GAFLLACYD + EE+QSICKIGTGFSEA LEERS SLRSKVI PK YYR + + PDVWFE +EVWEVKAADLTISPVHRAA GIVDP KGISLRFPRL+RVREDK PE A+SSEQ+A+MY AQKHN Sbjct: 3 SSRPSAFDALMSKARESAKKKTPQASTPSRSPNKRKIGETQDADLGKALVSEGTVSKIEI--------VSDSEKPRSDSVSIAEESKNVAKKPRVLSQSDKVMELKSKIELLKKKPGDFKPEKVSCWEKGERVPFLFVALAFDLISNESGRIVITDILCNMLRTVIATTPDDLVATVYLAANEIAPAHEGIELGIGEGSIIKAISEAFGRTEAQVKKLNTELGDLGLVAKGSRSSQTMMFKPEPLTVVKVFNTFRQIAKESGKDSTEKKKDRMKALLVAATDCEPLYLTRLLQAKLRLGFSNQTVLAALGQAAVYNEEHSKPPPTTKSPLEEAAKIVKQVFTVLPVYDIIVPALLTGGVWNLPKTCNFTLGVPIGPMLAKPTKGVGEILNKFQDTVFTCEYKYDGERAQVHCMEDGTFEIYSRNAERNTGKYPDVALALSRLKKPSVKSFILDCEVVAFDREKKKILPFQILSTRARKNVNVNDIKVGVCIFAFDMLYLNGQQLIQENLKIRREKLYDSFEEDPGYFQFATALTSSDIDEIQKFLDASVDIGCEGLIIKTLDSDATYEPAKRSNNWLKLKKDYMDSIGDSVDLVPIAAFHGRGKRTGVFGAFLLACYDVDKEEYQSICKIGTGFSEAVLEERSTSLRSKVIATPKQYYRVGDSLNPDVWFEPTEVWEVKAADLTISPVHRAATGIVDPVKGISLRFPRLLRVREDKKPEDATSSEQIADMYQAQKHNH 732
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy TrEMBL
Match: A0A078E250_BRANA (DNA ligase OS=Brassica napus GN=BnaA06g04600D PE=3 SV=1) HSP 1 Score: 1029.62 bits (2661), Expect = 0.000e+0 Identity = 523/738 (70.87%), Postives = 612/738 (82.93%), Query Frame = 1 Query: 310 STRPSAFDALMSNARRLAGXXXXXXXXXXXXXXXXXXXXTQNPNPPKTVGSTEVKHDPEVSSDGIGKPINDSPKPDLDEAKKTPDSKKVKVGSTS----ERNAEMKGKIGLLKKKPADFDPNMVACWEKGERVPFLFLSLAFDLISNETGRIVITDIVCNMFRTVIATTPDDLVATVYLAANKVAPAHEGLELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQASRSSQSMMRKPDPLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVYNEQHSKPPPNVQSPLEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEIKVDVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRDATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEPKSYYRCSEMMKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLVRVREDKTPEQASSSEQVAEMYNAQKHNQ 2511 S+RPSAFDALMSNAR A KK + Q NPP++ +++ + SD + +DS KP D DSKK S S ++ EMK KI LLKKKP +FDP V+CWEKGERVPFLF++LAFDLIS E+GRIVITDI+CNM RTVIATTPDDLVATVYL+AN++APAHEG+ELGIG+ SIIKA++EA GRTESQVK + GDLGLVA+ SRSSQ+MM KP+ LTV+KVF+TF+ IAKESGKDS EKKK+R+K+LLVAATDCEP YL RLLQ KLR+GFS QT+LAALGQAAVYNE+HSKPPP+ +SPLEEAAKIVKQVF++LPVYD IVPALL+GGVW+LPK+C FT GVP+GPMLAKPTKGV EI+NKFQD F CEYKYDGERAQ+H ME+G+ EIYSRNAE NTGK+PDV A+SR KK SVKSF+LDCE+VA+DR +KKILPFQILSTRARKNV V++IKV VCIFAFD+LYL+GQ L+ E L +R+E+LY+SFEE+PG+FQFAT LTS+D++EIQ FL+++V CEGLIIKTL+ DATYEP+KRS NWLKLKKDYM+SIGD++DLVPIAAFHGRGKRTG +GAFLLACYD + EEFQSICKIGTGFSEA LEERS SLRS+VI PK YYR + + PDVWFE +EVWEVKAADLTISPVHRAA GIVDPDKGISLRFPRL+RVREDK PE+A+SSEQ+A+MY AQKHN Sbjct: 3 SSRPSAFDALMSNARASAAKKKT----------------PQASNPPRSPNKRKIEKTQD--SDLVKTEASDSAKPGSDPPSIAEDSKKGAKKSRSLTQTDKIEEMKSKIALLKKKPGEFDPERVSCWEKGERVPFLFIALAFDLISAESGRIVITDILCNMLRTVIATTPDDLVATVYLSANEIAPAHEGVELGIGEGSIIKAISEAFGRTESQVKKLNTELGDLGLVAKGSRSSQTMMFKPESLTVVKVFNTFRQIAKESGKDSTEKKKDRMKALLVAATDCEPLYLTRLLQAKLRLGFSNQTVLAALGQAAVYNEEHSKPPPSTKSPLEEAAKIVKQVFTVLPVYDIIVPALLSGGVWNLPKTCNFTLGVPIGPMLAKPTKGVGEILNKFQDTVFTCEYKYDGERAQVHCMEDGTFEIYSRNAERNTGKYPDVALALSRLKKPSVKSFILDCEVVAFDREKKKILPFQILSTRARKNVNVNDIKVGVCIFAFDMLYLNGQQLIQENLNIRREKLYESFEEDPGYFQFATTLTSSDIDEIQKFLDASVDIGCEGLIIKTLNSDATYEPAKRSNNWLKLKKDYMDSIGDSVDLVPIAAFHGRGKRTGVFGAFLLACYDADKEEFQSICKIGTGFSEAVLEERSTSLRSRVIATPKQYYRVGDSLNPDVWFEPTEVWEVKAADLTISPVHRAATGIVDPDKGISLRFPRLLRVREDKKPEEATSSEQIADMYQAQKHNH 722
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy TrEMBL
Match: A0A078EW74_BRANA (DNA ligase OS=Brassica napus GN=BnaA09g49030D PE=3 SV=1) HSP 1 Score: 1025 bits (2649), Expect = 0.000e+0 Identity = 542/797 (68.01%), Postives = 640/797 (80.30%), Query Frame = 1 Query: 145 MLTFRPSHLLRYTCCITRPLTPLLPPFSSHILPSN---SPFFRPKPXXXXXXNPHSNMSTRPSAFDALMSNARRLAGXXXXXXXXXXXXXXXXXXXXTQNPNPPK-TVGSTEVKHDP--EVSSDGIGKPINDSPK--PDLDEAKKTPDSKKVKVGSTSERNAEMKGKIGLLKKKPADFDPNMVACWEKGERVPFLFLSLAFDLISNETGRIVITDIVCNMFRTVIATTPDDLVATVYLAANKVAPAHEGLELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQASRSSQSMMRKPDPLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVYNEQHSKPPPNVQSPLEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEIKVDVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRDATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEPKSYYRCSEMMKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLVRVREDKTPEQASSSEQVAEMYNAQKHNQ 2511 ML R S+ R CI+ T FSS ++ N SPF S S L+ + S+RPSAFDALMSNAR A K+K+ + +P+P K + T+ P E SD KP +DSP DL + KT D+ K +++ E+K +I LLK+KP +FDP VACWEKGERVPFLF++LAFDL+S E+GRIVITDI+CNM RTVIATTPDDLVA VYLAAN++APAHEG+ELGIG+ SIIKA++EA GRTE+QVK + GDLGLVA+ SRSSQ+MM KP+PLTV+KVF+TF+ IAKESGKDS EKKK+R+K+LLVAATDCEP YL RLLQ KLR+GFS QT+LAALGQAAVYNE+HSKPPP +SPLEEAAKIVKQVF++LPVYD IVPALLTGGVW+LPK+C FT GVP+GPMLAKPTKGV EI+NKFQD F CEYKYDGERAQ+H ME+G+ EIYSRNAE NTGK+PDV A+SR KK SVKSF+LDCE+VA+DR +KKILPFQILSTRARKNV V++IKV VCIFAFD+LYL+GQ L+ E L +R+E+LY SFEE+PG+FQFATALTS+D++EIQ FL+++V CEGLIIKT++ DATYEP+KRS NWLKLKKDYM+SIGD++DLVPIAAFHGRGKRTG +GAFLLACYD + EEFQSICKIGTGFSEA LEERS SLRS+VIP PK YYR + + PDVWFE +EVWEVKAADLTISPVHRAA GIVDPDKGISLRFPRL+RVREDK PE+A+SSEQ+A+MY AQKHN Sbjct: 1 MLAIRSSNHFR---CISSLCTKTR--FSSVLVSLNRQVSPF-----PSSSRLHHRAMSSSRPSAFDALMSNARASA------------KKKTTPQASNSSPSPNKRKISKTQDADSPKAEAFSDS-PKPRSDSPSIAEDLKKGAKTQDADLTK----TDKVDELKSRIVLLKRKPGEFDPERVACWEKGERVPFLFVALAFDLVSAESGRIVITDILCNMLRTVIATTPDDLVAAVYLAANEIAPAHEGVELGIGEGSIIKAISEAFGRTEAQVKKLNTELGDLGLVAKGSRSSQTMMFKPEPLTVVKVFNTFRQIAKESGKDSTEKKKDRMKALLVAATDCEPLYLTRLLQAKLRLGFSNQTVLAALGQAAVYNEEHSKPPPKTKSPLEEAAKIVKQVFTVLPVYDIIVPALLTGGVWNLPKTCNFTLGVPIGPMLAKPTKGVGEILNKFQDTVFTCEYKYDGERAQVHCMEDGTFEIYSRNAERNTGKYPDVALALSRLKKPSVKSFILDCEVVAFDREKKKILPFQILSTRARKNVNVNDIKVGVCIFAFDMLYLNGQQLIQENLDIRREKLYGSFEEDPGYFQFATALTSSDIDEIQKFLDASVDIGCEGLIIKTMNSDATYEPAKRSNNWLKLKKDYMDSIGDSVDLVPIAAFHGRGKRTGVFGAFLLACYDADKEEFQSICKIGTGFSEAVLEERSTSLRSRVIPTPKQYYRVGDSLNPDVWFEPTEVWEVKAADLTISPVHRAANGIVDPDKGISLRFPRLLRVREDKKPEEATSSEQIADMYQAQKHNH 770
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy TrEMBL
Match: M4ES34_BRARP (DNA ligase OS=Brassica rapa subsp. pekinensis GN=Bra031612 PE=3 SV=1) HSP 1 Score: 1022.69 bits (2643), Expect = 0.000e+0 Identity = 528/758 (69.66%), Postives = 619/758 (81.66%), Query Frame = 1 Query: 310 STRPSAFDALMSNARRLAGXXXXXXXXXXXXXXXXXXXXTQNPNPPK-TVGSTEVKHDP--EVSSDGIGKPINDSPK--PDLDEAKKTPDS-------------------KKVKVGSTSERNAEMKGKIGLLKKKPADFDPNMVACWEKGERVPFLFLSLAFDLISNETGRIVITDIVCNMFRTVIATTPDDLVATVYLAANKVAPAHEGLELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQASRSSQSMMRKPDPLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVYNEQHSKPPPNVQSPLEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEIKVDVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRDATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEPKSYYRCSEMMKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLVRVREDKTPEQASSSEQVAEMYNAQKHNQ 2511 S+RPSAFDALMSNAR A K+K+ + +P+P K + T+ P E SD KP +DSP DL + KT D+ KK + S +++ E+K +I LLK+KP +FDP VACWEKGERVPFLF++LAFDL+S E+GRIVITDI+CNM RTVIATTPDDLVA VYLAAN++APAHEG+ELGIG+ SIIKA++EA GRTE+QVK + GDLGLVA+ SRSSQ+MM KP+PLTV+KVF+TF+ IAKESGKDS EKKK+R+K+LLVAATDCEP YL RLLQ KLR+GFS QT+LAALGQAAVYNE+HSKPPP +SPLEEAAKIVKQVF++LPVYD IVPALLTGGVW+LPK+C FT GVP+GPMLAKPTKGV EIINKFQD F CEYKYDGERAQIH ME+G+ EIYSRNAE NTGK+PDV A+SR KK SVKSF+LDCE+VA+DR +KKILPFQILSTRARKNV V++IKV VCIFAFD+LYL+GQ L+ E L +R+E+LY SFEE+PG+FQFATALTS+D++EIQ FL+++V CEGLIIKT++ DATYEP+KRS NWLKLKKDYM+SIGD++DLVPIAAFHGRGKRTG +GAFLLACYD + EEFQSICKIGTGFSEA LEERS SLRS+VIP PK YYR + + PDVWFE +EVWEVKAADLTISPVHRAA GIVDPDKGISLRFPRL+RVREDK PE+A+SSEQ+A+MY AQKHN Sbjct: 3 SSRPSAFDALMSNARASA------------KKKTTPQASNSSPSPNKRKISKTQDADSPKAEAFSDS-PKPRSDSPSIAEDLKKGAKTQDADLTKVEAFSDSAKPRSSIAKKSRTLSQTDKVDELKSRIVLLKRKPGEFDPERVACWEKGERVPFLFVALAFDLVSAESGRIVITDILCNMLRTVIATTPDDLVAAVYLAANEIAPAHEGVELGIGEGSIIKAISEAFGRTEAQVKKLNTELGDLGLVAKGSRSSQTMMFKPEPLTVVKVFNTFRQIAKESGKDSTEKKKDRMKALLVAATDCEPLYLTRLLQAKLRLGFSNQTVLAALGQAAVYNEEHSKPPPKTKSPLEEAAKIVKQVFTVLPVYDIIVPALLTGGVWNLPKTCNFTLGVPIGPMLAKPTKGVGEIINKFQDTVFTCEYKYDGERAQIHCMEDGTFEIYSRNAERNTGKYPDVALALSRLKKPSVKSFILDCEVVAFDREKKKILPFQILSTRARKNVNVNDIKVGVCIFAFDMLYLNGQQLIQENLDIRREKLYGSFEEDPGYFQFATALTSSDIDEIQKFLDASVDIGCEGLIIKTMNSDATYEPAKRSNNWLKLKKDYMDSIGDSVDLVPIAAFHGRGKRTGVFGAFLLACYDADKEEFQSICKIGTGFSEAVLEERSTSLRSRVIPTPKQYYRVGDSLNPDVWFEPTEVWEVKAADLTISPVHRAANGIVDPDKGISLRFPRLLRVREDKKPEEATSSEQIADMYQAQKHNH 747
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy Swiss-Prot
Match: DNLI3_SCHPO (DNA ligase 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=adl1 PE=3 SV=1) HSP 1 Score: 423.705 bits (1088), Expect = 3.081e-131 Identity = 250/681 (36.71%), Postives = 389/681 (57.12%), Query Frame = 1 Query: 499 GIGKPINDSPKPDLDEAKKTPDSKKVKVGSTSERNAEMKGKIGLLKKKPADFDPNMVACWEKGERVPFLFLSLA--FDLISNETGRIVITDIVCNMFRTVIATTPDDLVATVYLAANKVAPAHEGLELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQASRSSQSMMRKPDPLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVY----NEQHSKPPPNVQSPLEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEIKVDVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRD-----ATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEP-KSYYRCSEMMK--PDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLVRVREDKTPEQASSSEQVAEMYNAQ 2499 + K ND PK +L T + K ST N + L+K P + + A + + F + SLA F LIS+ RI I ++ N T++ PD L+ATV+L N +AP G LG+G A KAL E CG T S +K+ + GD G VA ++ S + +P+PLT+ KV+ T IA +G +Q +K K LL+++ E +Y+ R + LRIG + T+LA+L +A NE + ++Q + +IVKQ F +P Y+ +V LL G+ +L + PG+PV PML TK + ++ + D +F CE+KYDG+RAQIH G+++I+SR+ E TG+FPDV+ +++ F+++ ELVA D+ +IL FQ LSTR RK V V++I +DVC+F FDI++ DG+ L L R+ ++ F P FQF ++L +N+ + IQ F + A+++ CEGL++K L+ +TYEP KR W+K+K+DY + ++LDLVPI A++G G++ G++ LLA Y+ + ++++CK +GFS+ +E + + K Y E K P ++F EVWE+K A +T SP ++AA+G++ D+G+S+RFPR +RVR DK PE AS++ +A+MY Q Sbjct: 97 NVVKESNDKPKENL----VTSEECKASFFSTDSVNKDSTIDYDALQKDPLTYVKSCRARFVSKDTKSFSYSSLANTFSLISSTKSRIRIVTLLTNFLLTLLYADPDSLIATVWLCTNSIAPNFYGKNLGVGPAMYSKALKEVCGITASALKNLWNKYGDPGDVAFEAKVSVRTLSRPEPLTIKKVYSTLLKIADSNGNGAQNRKLELTKFLLISSNAEEVRYIGRSIMQNLRIGAVQNTMLASLSKAFFIFDNQNEIFNFNSDSLQQQFRQGEEIVKQSFFQVPDYNILVATLLREGIENLKDNMSIRPGIPVKPMLGSITKNLQHMLERLTDHNFSCEFKYDGQRAQIHCDRLGNIKIFSRHLEEITGRFPDVI-EVAQLALKHSCDFIIEGELVAIDKSNGQILDFQKLSTRERKKVTVADITIDVCVFVFDIMFCDGKSCLQMPLIERRRMFFEHFNLIPNRFQFVSSLETNEEQSIQEFFSLAITNKCEGLMVKVLNGTNSKFPSTYEPDKRGEGWIKVKQDYDDEF-ESLDLVPIGAWYGNGRKAGWFSPILLAVYNPDTGAYEAVCKCMSGFSDQFYKELTQKYSLESGNSSLKPIYNFCETGKVTPQIYFAPQEVWEIKGAQITSSPAYKAALGLIQDDRGLSIRFPRFIRVRSDKGPEDASTNSILADMYMKQ 771
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy Swiss-Prot
Match: DNLI_PYRCJ (DNA ligase OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=lig PE=3 SV=1) HSP 1 Score: 337.806 bits (865), Expect = 2.017e-101 Identity = 213/598 (35.62%), Postives = 330/598 (55.18%), Query Frame = 1 Query: 730 ISNETGRIVITDIVCNMFRTVIATTPDDLVATVYLAANKVAPAHEGLELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQ-----ASRSSQSMMRKPDPLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVYNEQHSKPPPNVQSPLEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEIKV-DVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRDATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEPKSYYRCSEMMKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLV-RVREDKTPEQASSSEQVAEMYNAQK 2502 + + T R + ++ ++F+ P+++ VY + P EG+ELG+ + I+A+++A G + ++++ YK GD+G VA+ R + + PL V +V+DT +AK +G+ +Q+ K + + SL A+ E +Y+ R + KLR+G ++ TL+ AL +A +++ + +V L ++ + V P+ + TPGVPV PMLA+ +EI+ K ICEYKYDGERAQIH + GSV+I+SR E T +PDV A+ K+ L+ E+VA D ++LPFQ L R RK+ V ++ ++ FD+LY+DG+ L + L R+ RL + EE G A + E++ +F + AVS EGLI K+ +TYE R NW+K K+DY + DT+DLV + AFHGRGKR G YGAFLLA YD + + F ++CK+G+GF++A+L L+ IP + R M+PDVWF V EV A++T+SP+H IG V P G+++RFPR R R DK PE A++++++ EMY QK Sbjct: 13 VESTTQRTTMVKLLTSLFKK---AKPEEIDKIVYFILGDLRPPWEGVELGVAEKLCIRAISKATGLSAAELEGWYKKSGDVGEVARRALAAGKRPTLLAFAQQKPLEVAEVYDTLLKVAKAAGEGAQDLKVSLLSSLFSRASPEEAKYIARFVVGKLRLGVADMTLIEALSEAFGVSKEGLERAYHVYPDL---GRLARHVAEGRPL-----------------EEIKITPGVPVLPMLAQRLSSASEILAKLGGTA-ICEYKYDGERAQIH-LREGSVKIFSRRLEDITHAYPDVAKAVKEAVKAREAI--LEGEIVAVDPDTGEMLPFQELMHRKRKHDVAEAMEAYPAVLYLFDLLYVDGEDLTTQPLIYRRLRLSEVVEE-GGDVYIAKWGMFDGAEDVDLFFHEAVSLGTEGLICKS--PTSTYEMGARGWNWIKYKRDYRSEMIDTVDLVVVGAFHGRGKRAGLYGAFLLAAYDPSTDMFYTVCKVGSGFTDADLRRMYDMLQPLKIPH--RHPRVVSKMQPDVWFVPQVVIEVIGAEITLSPLHTCCIGAVKPGVGLAIRFPRFTGRYRTDKRPEDATTTKELVEMYQRQK 578
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy Swiss-Prot
Match: DNLI_PYRIL (DNA ligase OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=lig PE=3 SV=1) HSP 1 Score: 335.88 bits (860), Expect = 1.085e-100 Identity = 215/601 (35.77%), Postives = 335/601 (55.74%), Query Frame = 1 Query: 730 ISNETGRIVITDIVCNMFRTVIATTPDDLVATVYLAANKVAPAHEGLELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQASRSSQSMMRKPD--------PLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVYNEQHSKPPPNVQSPLEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEIKV-DVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRDATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEPKSYYRCSEMMKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLV-RVREDKTPEQASSSEQVAEMYNAQK 2502 + + T R + ++ ++F+ P+++ +Y + P EG+ELG+ + ++A+++A G + S++++ YK GD+G +A+R + S ++P PL V +V+DT +A+ SG+ +Q+ K + + SL A+ E +Y+ R + KLR+G ++ TL+ AL A +++ LE A + I P K+ + G + K TPGVPV PMLA+ +EI+ K ICEYKYDGERAQIH ++ G V+I+SR E T +PDVV A+ + L+ E+VA D +LPFQ L R RK+ V +++ V + FD+LY+DG+ L +E L R+ RL + +E A +D EEI +F + AVS EGL+ K+ + YE R NW+K K+DY + DT+DLV + AF+GRGKR G YGAFLLA YD + F ++CK+G+GF++A+L++ L+ IP + R M+PDVWF V EV A++T+SP+H +G V P G+++RFPR R R DK+PEQA++ ++ E+Y QK Sbjct: 13 VESTTQRTTMVKLLTSLFKK---ARPEEIDKIIYFVLGDLRPPWEGVELGVAEKLCLRAVSKATGVSISELEALYKKTGDVG---EAARKALSTAKRPGLLAFGQQKPLEVSEVYDTLLKVAQASGEGAQDMKISLLASLFAKASPEEAKYIARFVVGKLRLGVADMTLIEALSDAFGVDKE----------ALERA-------YHIYPDLGKLARHVAEGRPLEEIK---ITPGVPVLPMLAQRLSSSSEILAKLGG-SAICEYKYDGERAQIH-LKEGVVKIFSRRLEDITHAYPDVVKAVREAVSAREAI--LEGEIVAIDPDTGDMLPFQELMHRKRKHEVAVAVEMYPVVLNLFDLLYIDGEDLTNEPLIYRRVRLSEVVQETEKV-SIAKWRVFDDAEEIDVFFHEAVSLGMEGLVCKS--PTSVYEMGARGWNWIKYKRDYKSEMIDTVDLVVVGAFYGRGKRAGLYGAFLLAAYDPATDMFYTVCKVGSGFTDADLKKMYEMLQPYKIPH--RHPRVVSKMEPDVWFTPQVVIEVIGAEITLSPLHTCCLGAVKPGVGLAIRFPRFTGRYRTDKSPEQATTVSEMIELYKRQK 578
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy Swiss-Prot
Match: DNLI_PYRAR (DNA ligase OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=lig PE=3 SV=1) HSP 1 Score: 334.724 bits (857), Expect = 2.382e-100 Identity = 214/605 (35.37%), Postives = 339/605 (56.03%), Query Frame = 1 Query: 718 AFDLISNETGRIVITDIVCNMFRTVIATTPDDLVATVYLAANKVAPAHEGLELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQASRSSQSMMRKPD--------PLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVYNEQHSKPPPNVQSPLEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEIKV-DVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRDATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEPKSYYRCSEMMKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLV-RVREDKTPEQASSSEQVAEMYNAQK 2502 A + + T R V+ ++ ++F+ + P+++ +YL + P EGLELG+G+ ++ALA+A G ++++++S YK GD+G +A+R + + ++P PL V +V+D +A+ +G+ +Q+ K + SL ++ E +Y+ R + KLR+G ++ T++ AL A ++ + +V L AK+V +G D K TPGVPV PMLA+ +EI+ K ICEYKYDGERAQIH ++G V I+SR E T +PDVV A+ + L+ E+VA D ++LPFQ L R RK+ V + +++ ++ FDI+Y+DG+ L +E L R+ +L + E Q A +D + + +F + AVS EGLI K+ + YE R NW+K K+DY + DT+DLV + AF+GRGKR G YGAFLLA YD +++ F ++CK+G+GF++A+L++ L+ IP + R S M+ DVWF V EV A++T+SP+H +G V P G+++RFPR R R DK PEQA++ ++ E+Y QK Sbjct: 9 ALAAVESTTQRSVMVKLLASLFKKAL---PEEIDKVIYLILGDLRPPWEGLELGVGEKLCLRALAKATGTSQAELESMYKKTGDIG---EAARRALASSKRPGLLAFGSQKPLEVSEVYDALIKVARATGEGAQDMKIALLSSLFARSSPEEGKYIARFVVGKLRLGVADMTIIEALADAYGVRKEDLERAYHVYPDLGHLAKLVA-----------------SGKPLDEVK---VTPGVPVLPMLAQRLSSSSEILAKLGGAA-ICEYKYDGERAQIHISQSG-VRIFSRRLEDITHAYPDVVKAVREAVSAREAI--LEGEIVAVDPDTGEMLPFQELMHRKRKHEVAAAMEMYPTVLYLFDIVYVDGEDLTNEPLIYRRVKLSEIVHESDKV-QIAKWQMFDDPDTVDVFFHEAVSVGTEGLICKS--PTSEYEMGARGWNWIKYKRDYKSEMIDTVDLVVVGAFYGRGKRAGLYGAFLLAAYDPSSDMFYTVCKVGSGFTDADLKKMYEILQPLKIPH--RHPRVSSKMEADVWFVPQVVIEVIGAEITLSPLHTCCLGAVRPGVGLAVRFPRFTGRYRTDKGPEQATTVAEMLELYKRQK 578
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy Swiss-Prot
Match: DNLI_PYRNV (DNA ligase OS=Pyrobaculum neutrophilum (strain DSM 2338 / JCM 9278 / V24Sta) GN=lig PE=3 SV=1) HSP 1 Score: 332.413 bits (851), Expect = 1.890e-99 Identity = 215/601 (35.77%), Postives = 328/601 (54.58%), Query Frame = 1 Query: 730 ISNETGRIVITDIVCNMFRTVIATTPDDLVATVYLAANKVAPAHEGLELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQASRSSQSMMRKPD--------PLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVYNEQHSKPPPNVQSPLEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEIKVDVCIF-AFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRDATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEPKSYYRCSEMMKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLV-RVREDKTPEQASSSEQVAEMYNAQK 2502 + + T R + ++ ++ + PD++ VY + P EG+ELG+ + ++A+++A G S++++ YK GD+G +A+R + S ++P PL V +V+DT +AK +G+ +Q+ K + + SL AT E +Y+ R + KLR+G ++ TLL AL +A ++ LE A + + P K+ + G + K TPGVPV PMLA+ +EI+ K +CEYKYDGERAQIH + GSV+I+SR E T +PDVV A+ + L+ E+VA D +LPFQ L R RK+ V + ++ + FD+LYLDG+ L E L R+ RL + E A +D E+ +F + AVS EGL+ K+ + YE R NW+K K+DY + DT+DLV + AF+GRGKR G YGAFLLA YD + F ++CK+G+GF++A+L++ L+ IP + R M PDVWF V EV A++T+SP+H +G V P G+++RFPR R R DK+PEQA++ ++ E+Y QK Sbjct: 13 VESTTQRTTMVKLLTSLLKR---ARPDEVDKIVYFVLGDLKPPWEGVELGVAEKLCLRAVSKAAGTPLSELEAVYKRTGDVG---EAARRALSAAKRPGLLAFGQQKPLEVSEVYDTLLKVAKAAGEGAQDMKISLLASLFARATPEEAKYIARFVVGKLRLGVADMTLLEALSEAFGVGKE----------ALERA-------YHVWPDMGKLARHVAEGRPLEEVK---ITPGVPVLPMLAQRLSSASEILAKLGGAA-VCEYKYDGERAQIH-ISGGSVKIFSRRLEDITHAYPDVVKAVKESVAAGEAI--LEGEIVAVDPDTGDMLPFQELMHRKRKHEVAAAVESYPAVLNLFDVLYLDGEDLTGEPLIYRRLRLSEVVHETEKV-SIARWRLFDDPGEVDVFFHEAVSLGMEGLVCKS--PTSIYEMGARGWNWIKYKRDYKSEMIDTVDLVVVGAFYGRGKRAGLYGAFLLAAYDPQTDMFYTVCKVGSGFTDADLKKMYEVLQPYKIPH--RHPRVVSKMTPDVWFTPQVVIEVIGAEITLSPLHTCCLGAVRPGVGLAIRFPRFTGRYRTDKSPEQATTPAEMVELYKRQK 578
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy Swiss-Prot
Match: DNLI_PYRAE (DNA ligase OS=Pyrobaculum aerophilum (strain ATCC 51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827) GN=lig PE=3 SV=2) HSP 1 Score: 329.717 bits (844), Expect = 1.872e-98 Identity = 212/605 (35.04%), Postives = 331/605 (54.71%), Query Frame = 1 Query: 718 AFDLISNETGRIVITDIVCNMFRTVIATTPDDLVATVYLAANKVAPAHEGLELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQASRSSQSMMRKPD--------PLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVYNEQHSKPPPNVQSPLEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEIKV-DVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRDATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEPKSYYRCSEMMKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLV-RVREDKTPEQASSSEQVAEMYNAQK 2502 A I T R + ++ ++F+ +P+++ VY + P EG+ELG+ + ++A+++A G S++++ YK GD+G +A+R + + ++P PL V +V+DT +A+ +G+ +Q+ K + SL AT E +Y+ R + KLR+G ++ T++ AL A N++ LE+A + I P ++ + G D TPGVPV PMLA+ +EI+ K ICEYKYDGERAQIH + G V+I+SR E T +PDVV A+ + L+ E+VA D +LPFQ L R RK+ V + +++ ++ FD+LY+DG+ L E L R+ RL + E A ++ E + +F + +VS EGLI K+ + YE R NW+K K+DY + DT+DLV + AFHGRGKR G YGAFLLA YD + + F ++CK+G+GF++A+L++ L+ IP + R M+ DVWF V EV A++T+SP+H +G V P G+++RFPR R R DK+PEQA++ ++ E+Y QK Sbjct: 9 ALAAIEATTQRTTMVKLLVSLFKK---ASPEEVGKIVYFILGDLRPPWEGVELGVAEKLCLRAVSKATGAAVSELEALYKKTGDVG---EAARRALAASKRPGLLAFGSQKPLEVSEVYDTLLKVARATGEGAQDMKVALLSSLFARATPEEGKYIARFVVGKLRLGVADMTIIEALSDAYGVNKE----------ALEKA-------YHIYPDLGRLAKHVAEGKPLD---EIRITPGVPVLPMLAQRLSSASEILAKLGG-SAICEYKYDGERAQIH-LTPGGVKIFSRRLEDITHAYPDVVKAVKEAVSAKEAI--LEGEIVAVDPDTGDMLPFQELMHRKRKHDVATAVELYPTVLYLFDVLYVDGEDLTEEPLIYRRVRLSEIVCETDKV-SIAKWRIFDNAEAVDVFFHESVSMGTEGLICKS--PSSIYEMGARGWNWIKYKRDYRSEMIDTVDLVVVGAFHGRGKRAGLYGAFLLAAYDPSTDMFYTVCKVGSGFTDADLKKMYEILQPFKIPH--RHPRVVSKMEADVWFVPQVVIEVIGAEITLSPLHTCCLGAVRPGVGLAVRFPRFTGRYRSDKSPEQATTVAEMLELYKRQK 578
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy Swiss-Prot
Match: DNLI_AERPE (DNA ligase OS=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=lig PE=1 SV=2) HSP 1 Score: 329.331 bits (843), Expect = 3.401e-98 Identity = 207/582 (35.57%), Postives = 326/582 (56.01%), Query Frame = 1 Query: 796 ATTPDDLVATVYLAANKVAPAHEGL-ELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQA------SRSSQS------MMRKPDPLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVYNEQHSKPPPNVQSPLEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEIK-VDVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRDATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEPKSYYRCSEMMKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLVRVREDKTPEQASSSEQVAEMYNAQ 2499 +T P + VYL K+ P +GL ELG+G+ ++KA+A A TE +V+ YK GDLG VA+ SR++++ M + LTV +V++T IA G+ S++ K + LL A E +Y++R ++ +LR+G + T+L AL A H++P ++++ +++ I + GV D + GVP+ PMLA+ + AEI+ K + EYKYDGERAQIH ++G V IYSR E T FPDVV + K+ ++ E+VA D +I PFQ+L R RK+ + ++ V V +F FD LY+DG+ L + L R+ RL + E P ++ A ++ ++D EE+ F A+ EG+++K + RD+ Y R W+KLK+DY + DT+DLV + AF+GRGKR G + L+A YD + + F ++CK+ TGF++ EL+ + L+ +I P+ + R ++PDVW E + V E+ A+LT+SP+H + V P GIS+RFPR +R R+DK+PE A+++ ++ EMY Q Sbjct: 32 STPPGAIGIVVYLIQGKLGPDWKGLPELGVGEKLLVKAIALAYKATEERVERLYKSVGDLGSVAERLSREYRSRAARAVTLEAFMAGGGEALTVRRVYNTLYRIAMAQGEGSRDIKLRLLAGLLADAEPVEAKYIVRFVEGRLRVGVGDATVLDALAMA-FGGGAHARP-------------VIERAYNLRADLGYIAEVVAREGV-DALRGVKPQVGVPIRPMLAERGRDPAEILRKVGG-RAVVEYKYDGERAQIH-KKDGEVYIYSRRLENITRMFPDVVEMARKGLKAGEAI--VEGEIVAVDPDNYEIQPFQVLMQRKRKHDIHRVMREVPVAVFLFDALYVDGEDLTSKPLPERRRRLKEIVVETP-LWRLAESIETSDPEELWTFFLKAIEEGAEGVMVKAVHRDSVYTAGVRGWLWVKLKRDYKSEMMDTVDLVVVGAFYGRGKRGGKLSSLLMAAYDPDRDVFPTVCKVATGFTDEELDRMNEMLKKHII--PRKHPRVESRIEPDVWVEPALVAEILGAELTLSPMHTCCLNTVRPGVGISIRFPRFIRWRDDKSPEDATTTHELLEMYKRQ 591
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy Swiss-Prot
Match: DNLI_THEAC (DNA ligase OS=Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) GN=lig PE=3 SV=1) HSP 1 Score: 328.561 bits (841), Expect = 5.151e-98 Identity = 206/611 (33.72%), Postives = 328/611 (53.68%), Query Frame = 1 Query: 700 FLFLSLAFDLISNETGRIVITDIVCNMFRTVIATTPDDLVATVYLAANKVAPAHEGLELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQA---SRSSQSMMRKPDPLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVYNEQHSKPPPNVQSPLEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEI--KVDVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRDATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEPKSYYRCSEMMKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLV-RVREDKTPEQASSSEQVAEMYNAQKHNQT 2514 F ++ AF+ + + T R+ +TD++ N+ + DDL +YL K+ P + G+E + D IIKAL+ A +E ++ +Y GD+G +A+ RS +S+++ + +TV + DT +A+ +G S + + + L + +T E Y+ R++ KLRIG S+ T+L A+ +A +E++S+ ++ F+ P I L G + D G TP +P MLA+ + V EI+ K EYKYDG R + H +E G V ++SR E T +FPD+ A S K LD E V YD ++ PFQ++S R + + ++ ++ + +F FDI+YL+G+ L R++ L F E F + A + S D E+ F NSA+ CEGL+ K+ D+ Y+ R W+KLK+DY + DTLDL + AF+G G+R G YGA LLA Y++ N+ F+++CK+G+GFS+ L V E + R ++PDVWF + V EV A++T+SP+H A G ++ D G+S+RFPR + REDK PE +++S ++ EMY QK T Sbjct: 3 FSVVADAFEKMESTTKRLELTDLLVNLLKEA----DDDLPLLIYLLEGKLGPDYLGIETQMSDKLIIKALSVASNISEDEIAKEYAKAGDIGTIAKEIAEKRSLRSLVQ--EEMTVKYIHDTLMKMARTTGSGSTKARVDAYMDLFLNSTPKEIMYITRIITGKLRIGISDATILDAIVKAFA-DEKYSED--------------IENAFNFHPDLGYIASELRKGNI-DAILKLGPTPMIPFKVMLAERLRSVEEILEKMGG-RCAFEYKYDGMRTETH-IERGKVRLFSRGNEETTNQFPDITKAASETFKVDSAI--LDGEAVPYDPDTGELYPFQVISHRRGRKYDLDKVSSEIPITVFLFDIVYLNGRDLSKTPYTERRKILESIFTESDSF-RLAKRIESGDPAEVHRFFNSAIEDGCEGLVAKSTSPDSFYKAGARGWLWIKLKRDYQAQLWDTLDLTVVGAFYGHGRRKGTYGALLLATYNDKNDTFETVCKLGSGFSDDVLFSLPKKFEQYVSKEKPA--RVISNLEPDVWFYPAVVMEVIGAEITVSPIHTCAYGEIEKDSGLSVRFPRFTGKWREDKKPEDSTTSREILEMYKEQKKTIT 584
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy Swiss-Prot
Match: DNLI_PICTO (DNA ligase OS=Picrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828) GN=lig PE=3 SV=2) HSP 1 Score: 326.635 bits (836), Expect = 2.654e-97 Identity = 198/599 (33.06%), Postives = 336/599 (56.09%), Query Frame = 1 Query: 721 FDLISNETGRIVITDIVCNMFRTVIATTPDDLVATVYLAANKVAPAHEGLELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQASRSSQSMMRKP---DPLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVYNEQHSKPPPNVQSPLEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEI--KVDVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRDATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEPKSYYRCSEMMKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLVRVREDKTPEQASSSEQVAEMYNAQK 2502 F + T R+ +T I+ +F+ + DDL VYL K+ P + G+ELG+ D IIK+L++A GR+E + + GDLG + A S S +++P + LTV V++ I+ +G S + K + LL+ + E +Y+ R++ KLR+G ++ T+L L +A ++E+ + A ++ ++ P I L+ G + +L + G P +P MLA+ + +++I NK + EYKYDG R Q+H+++ G ++I+SR E T FPD+V S S ++D E V Y+ ++ PFQ++S R + ++E +V + +F FDILYL+G+ L++ R+ L +F+E +F+ A + S+D +I F ++ CEG++ K+ D+ Y R W+K K+DY + D+LDLV + AF G G+R G +GA LLACY+ ++ F+++CK+G+GF++ L E L K++ + + R + M+PD W S V E++ A++T+SPVH A+ I++ G++LRFPRL++ R+DK PE A+++ ++ EMY AQK Sbjct: 10 FSRMEETTKRLELTSILAELFKR----SGDDLKKLVYLVQGKLMPDYLGIELGLSDKLIIKSLSKASGRSEEDINRIFSRLGDLG--STAEEISSSGIQRPLLKESLTVDYVYNQLIKISGYTGHGSIKTKMDAYIDLLINSGPMEIKYITRIITGKLRLGVADSTILDGLIEA--FSEK-------------KYADDIETAYNFHPDLGYIAENLMMGNINELL-NAGPVPLIPFKVMLAERLQSISDIRNKMGH-NASYEYKYDGLRTQLHFLKGG-IKIFSRGLEETTSSFPDIVQNFK--SYYSFDSCIIDGESVPYNPETGELYPFQMVSKRRGRKYELTEKTREVPIVMFIFDILYLNGKSLVNLPYPERRSILEKNFKENE-YFKLAKRIVSDDEHDIMKFFERSIEEGCEGIVAKSNGIDSIYRAGARGWLWIKFKRDYQSELSDSLDLVVVGAFDGHGRRKGTFGALLLACYNSKDDTFETVCKLGSGFTDEMLSEMPRLLGDKIVEKKPA--RVNSSMEPDHWIYPSLVLEIRGAEITVSPVHTCAMNIIEKGSGLALRFPRLIKPRDDKKPEDATTTNEIIEMYKAQK 579
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy Swiss-Prot
Match: DNLI_THEVO (DNA ligase OS=Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) GN=lig PE=3 SV=1) HSP 1 Score: 320.857 bits (821), Expect = 3.316e-95 Identity = 207/613 (33.77%), Postives = 331/613 (54.00%), Query Frame = 1 Query: 694 VPFLFLSLAFDLISNETGRIVITDIVCNMFRTVIATTPDDLVATVYLAANKVAPAHEGLELGIGDASIIKALAEACGRTESQVKSQYKDKGDLGLVAQ---ASRSSQSMMRKPDPLTVIKVFDTFQLIAKESGKDSQEKKKNRIKSLLVAATDCEPQYLIRLLQTKLRIGFSEQTLLAALGQAAVYNEQHSKPPPNVQSPLEEAAKIVKQVFSILPVYDKIVPALLTGGVWDLPKSCGFTPGVPVGPMLAKPTKGVAEIINKFQDIDFICEYKYDGERAQIHYMENGSVEIYSRNAECNTGKFPDVVAAISRXXXXXXXXXXLDCELVAYDRVQKKILPFQILSTRARKNVVVSEI--KVDVCIFAFDILYLDGQPLLHEQLKVRKERLYDSFEEEPGFFQFATALTSNDLEEIQIFLNSAVSSSCEGLIIKTLDRDATYEPSKRSLNWLKLKKDYMESIGDTLDLVPIAAFHGRGKRTGFYGAFLLACYDENNEEFQSICKIGTGFXXXXXXXXXXXXXXKVIPEPKSYYRCSEMMKPDVWFETSEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLV-RVREDKTPEQASSSEQVAEMYNAQKHNQT 2514 + F ++ AF+ +S T R +T+I+ + ++ +DL + VYL K+AP ++G+E + D IIKAL+ E V Y GD+G VA+ A ++ +S++ + LTV V DT +AK SG S + + + L ++ T + Y+ R++ KLRIG S+ T+L A+ A +E++S+ N ++ P I L G + + + G TP VP MLA+ + V EI+ K EYKYDG R +IH ++ V ++SR E TG+FPD+V S + V S +LD E V Y+ ++ PFQ++S R + + ++ ++ + +F FDI+Y++G+ L R+ L F+E F + A + S+D I F N A+ CEGL+ K++ D+ Y+ R W+KLK+DY + DT+DL + AF G G+R+G YGA LLA Y+E N+ F+++CK+G+GF++ L V E + R ++PDVW S V E+ A++TISPVH A GI++ D G+S+RFPR + R+DK PE +++++++ EMY QK T Sbjct: 1 MKFSLVTDAFEKMSKTTKRTELTEILVELLKSA----DEDLQSLVYLIEGKLAPDYQGIETQMSDKLIIKALSIVSNIPEEAVSETYSKLGDIGSVAREIAAKKNMRSLVN--EDLTVKYVHDTLMRMAKTSGSGSTKARIDAYVDLALSGTPADLMYITRIITGKLRIGVSDATILDAI-ILAFSDEKYSEEIENA--------------YNFHPDLGYIAVQLRLGNLESVI-NMGPTPMVPFKVMLAERLRSVDEIVQKMNG-KCAFEYKYDGMRTEIHIVDE-KVRLFSRGNEETTGQFPDIVK--SAKETFHVSSVILDGEAVPYNPETGELYPFQVISQRRGRKYDLDKVSNEIPITVFLFDIVYINGKDLSKTPYAERRRILEGLFKENDNF-KLAKRIVSSDTGTITKFFNQAIEDGCEGLVAKSMADDSYYKAGARGWLWIKLKRDYQAQLWDTIDLTVVGAFMGHGRRSGTYGALLLATYNEKNDTFETVCKLGSGFTDDVLFSLPKRFAEFVSKEKPA--RVVSTIEPDVWIYPSIVMEIIGAEITISPVHTCAFGIIEKDAGLSIRFPRFTGKWRDDKKPEDSTTTQEIIEMYKEQKKTLT 584 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0020740 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0020740 ID=g.arboreum_cottongen_reftransV1_0020740; Name=g.arboreum_cottongen_reftransV1_0020740; organism=Gossypium arboreum; type=contig; length=3157bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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