g.arboreum_cottongen_reftransV1_0010388, g.arboreum_cottongen_reftransV1_0010388 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0010388 vs. ExPASy TrEMBL
Match: U5GTA6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s16291g PE=3 SV=1) HSP 1 Score: 679.478 bits (1752), Expect = 0.000e+0 Identity = 374/552 (67.75%), Postives = 438/552 (79.35%), Query Frame = 1 Query: 94 VDEAEERAFKRKTRRRXXXXXXXXXXXXXXXXXXXXGTLIHKRNNSSPDTASPT-ELTPAASLKAVCEVTQYPXXXXXXXXXXXXXNATDPEILFKLSLKVVIDELSGLSQYPKKLQAETNNTQVKHALDVCGTVFDDALDRLNDSATSLEVGDGESLLSDSKIDDLKTWLSTVITDQETCLDALEELNTTKNFNATLFEELKAAMQNSSEYASNSLAIAAKILGLLTNFRIPIHRRLLGFQKAAPSEFPAWVSPTERRLLQESKPTPNVIVAKDGSGHFRTINEAVQLVGKKNQSRFVIYVKEGKYVENVNLDKHRWNVMIYGDGKTKTIISGSRNXXXXXXXXXXXXXXXXXRGFIAKDIKFENTAGAAKHQAVAMRSGSDRSVFYSCAFDAYQDTLYAHSNRQFYRECDILGTID---------------FIFGNAAVVFQNCNIQPRQPLPNQFNTITAQGKKDPNQNTGISIQKCTITPFGNLTANTYLGRPWKEFSTTVIMQSNIGAFLNPVGWREWVTNVDPPSTILYAEYQNTGPGSTVDQRVK 1701 VDE E++AF+RKTR+RLII+V+S IVLLAVIIGAV G ++H RNN+S P ELTPAASLKAVC VT+YP+SCFSSIS++ + N TDPE LFKLSL V ++ELS L YP KL ++ ++ AL VC TVFDDA+DRLNDS +S+ VG+G +LS +K+DDLKTW+ST ITDQETCLDAL+ELN TK+FN TL + +KA M+NS+E+ SNSLAI AKILGLL++F IPIHRRLLGF++ S FP WV +RRLLQ S P P+V VAKD SG T+ EAV + KK++SRF+IYVKEG+Y+ENV LDK +WNVMIYGDGK KTIISGS NFVDGT TF TA+F VAG+ F A+DIKF NTAGA KHQAVA RSGSD SV + CAFD +QDTLYAHSNRQFYR+CDI GTID F+FGNAAVVFQNCNIQPRQPLPNQFNTITAQGKKDPNQNTGISIQ C + GN+TA TYLGRPWK++ST VIMQS+IG FL P GW WV+ VDPP+TI YAEYQNTGPG+ VD RVK Sbjct: 5 VDEVEQQAFRRKTRKRLIIVVVSSIVLLAVIIGAVIGVVLHNRNNNSSSNPVPPPELTPAASLKAVCSVTRYPTSCFSSISALETGNTTDPEELFKLSLHVAMNELSKLKDYPDKLIQSIDDATLQDALKVCATVFDDAVDRLNDSISSMAVGEGGKILSTAKMDDLKTWISTTITDQETCLDALQELNVTKHFNQTLVDHVKAEMENSTEFVSNSLAIVAKILGLLSDFNIPIHRRLLGFERTHNSRFPHWVGLGDRRLLQMSTPKPDVTVAKDDSGDCTTLREAVGKIPKKSKSRFIIYVKEGEYLENVILDKSKWNVMIYGDGKDKTIISGSLNFVDGTPTFSTASFAVAGKSFFARDIKFINTAGAEKHQAVAFRSGSDMSVLFRCAFDGFQDTLYAHSNRQFYRDCDITGTIDLSMFGSLPQPRSQTCFMFGNAAVVFQNCNIQPRQPLPNQFNTITAQGKKDPNQNTGISIQNCKFSASGNVTAPTYLGRPWKDYSTAVIMQSDIGPFLRPSGWMSWVSGVDPPATIFYAEYQNTGPGARVDGRVK 556
BLAST of g.arboreum_cottongen_reftransV1_0010388 vs. ExPASy TrEMBL
Match: A0A078F517_BRANA (Pectinesterase OS=Brassica napus GN=BnaA05g14120D PE=3 SV=1) HSP 1 Score: 676.011 bits (1743), Expect = 0.000e+0 Identity = 359/592 (60.64%), Postives = 456/592 (77.03%), Query Frame = 1 Query: 58 MDSIKSFKGYGKVDEAEERAFKRKTRRRXXXXXXXXXXXXXXXXXXXXGTLIHKRNNSS--PDTASPTELTPAASLKAVCEVTQYPXXXXXXXXXXXXXNATDPEILFKLSLKVVIDELSGLSQYPKKLQAETNNTQVKHALDVCGTVFDDALDRLNDSATSLEVGDGES--LLSDSKIDDLKTWLSTVITDQETCLDALEEL--NTTKNFNATLFEELKAAMQNSSEYASNSLAIAAKILGLLTNFRIPIH--RRLLGFQKAAPSEFPAWVSPTERRLLQESKPTPNVIVAKDGSGHFRTINEAVQLVGKKNQSRFVIYVKEGKYVENVNLDKHRWNVMIYGDGKTKTIISGSRNXXXXXXXXXXXXXXXXXRGFIAKDIKFENTAGAAKHQAVAMRSGSDRSVFYSCAFDAYQDTLYAHSNRQFYRECDILGTIDFIFGNAAVVFQNCNIQPRQPLPNQFNTITAQGKKDPNQNTGISIQKCTITPFGNLTANTYLGRPWKEFSTTVIMQSNIGAFLNPVGWREWVTNVDPPSTILYAEYQNTGPGSTVDQRVKWAGYRSTLSEADAGKFTVANFIQGEDWLPAATVAYE 1809 MDS+ SFKGYGKVDEA++ A K+KTR+RLI+L +S ++L+AVIIGAV GT++H +N +S P +SP ELTP+ SLK +C VT+YP SCF+SIS + SSN TDPE+LFKLSLKV+IDEL G+S P+KL ET + ++K AL VCG + +DALDRLND+ +S++ + S L+ S+I+DLKTWLS +TD ETC DA++EL N T+ N+T+ ++LK+AM +S+E+ASNSLAI +KIL +++F IPIH RRLL Q+ P W RRLLQ P+V VA DGSG T+NEAV +V KK+ FVIYVK G+YVENV +DK +WNVMIYGDGK KTII+G +NF+DGT T++TATF + G+GFI KDI NT+GAAKHQAVA RSGSD SV+Y C+FD +QDTLY HSNRQFYR CD+ GTIDFIFG+AAVVFQ+C I PRQPL NQFNTITAQGKKDPNQN+G+SIQ+CTI+ GN+TA TYLGRPWK+FSTTVIM++ IG + GW WV VDPP++I+Y EY+NTGPGS V RVKWAGY++ ++ +A KFTVA + G DW+PA V ++ Sbjct: 1 MDSVTSFKGYGKVDEAQDLALKKKTRKRLILLTVSGVILVAVIIGAVVGTVVHNKNKNSTEPTPSSPPELTPSTSLKTICSVTRYPESCFNSISKLPSSNTTDPEVLFKLSLKVIIDELDGISDLPEKLSTETEDERIKSALRVCGNLIEDALDRLNDTVSSMDASEDGSKKTLNSSRINDLKTWLSATVTDHETCFDAIDELATNNTEYANSTITKQLKSAMSSSTEFASNSLAIVSKILAAISDFGIPIHGRRRLLMSQQP-----PEWA---RRRLLQTEGLKPDVTVAADGSGDVTTVNEAVAMVPKKSLKMFVIYVKAGRYVENVVMDKGKWNVMIYGDGKDKTIIAGGKNFIDGTPTYETATFAIQGKGFIMKDIAIINTSGAAKHQAVAFRSGSDFSVYYQCSFDGFQDTLYPHSNRQFYRNCDVTGTIDFIFGSAAVVFQDCKIMPRQPLGNQFNTITAQGKKDPNQNSGMSIQRCTISANGNVTAPTYLGRPWKDFSTTVIMETEIGPVVKATGWMSWVNGVDPPASIVYGEYKNTGPGSDVAMRVKWAGYKAVMTADEAAKFTVATLLHGGDWIPATGVTHQ 584
BLAST of g.arboreum_cottongen_reftransV1_0010388 vs. ExPASy TrEMBL
Match: R0GVN4_9BRAS (Pectinesterase OS=Capsella rubella GN=CARUB_v10008670mg PE=3 SV=1) HSP 1 Score: 670.233 bits (1728), Expect = 0.000e+0 Identity = 356/589 (60.44%), Postives = 451/589 (76.57%), Query Frame = 1 Query: 58 MDSIKSFKGYGKVDEAEERAFKRKTRRRXXXXXXXXXXXXXXXXXXXXGTLIHKRNNSSPDTASPTELTPAASLKAVCEVTQYPXXXXXXXXXXXXXNATDPEILFKLSLKVVIDELSGLSQYPKKLQAETNNTQVKHALDVCGTVFDDALDRLNDSATSLEVGDGESLLSDSKIDDLKTWLSTVITDQETCLDALEEL--NTTKNFNATLFEELKAAMQNSSEYASNSLAIAAKILGLLTNFRIPIHRR--LLGFQKAAPSE-FPAWVSPTERRLLQESKPTPNVIVAKDGSGHFRTINEAVQLVGKKNQSRFVIYVKEGKYVENVNLDKHRWNVMIYGDGKTKTIISGSRNXXXXXXXXXXXXXXXXXRGFIAKDIKFENTAGAAKHQAVAMRSGSDRSVFYSCAFDAYQDTLYAHSNRQFYRECDILGTIDFIFGNAAVVFQNCNIQPRQPLPNQFNTITAQGKKDPNQNTGISIQKCTITPFGNLTANTYLGRPWKEFSTTVIMQSNIGAFLNPVGWREWVTNVDPPSTILYAEYQNTGPGSTVDQRVKWAGYRSTLSEADAGKFTVANFIQGEDWLPAATVAYE 1809 MDS+ SFKGYGKVDEA++ A K+KTR+R+++L IS++VL+AVII AV T++H +N+ S SP ELTP+ SLK +C VT++P SC SSIS + SSN TDPE LFKLSL+V+IDEL +S P+KL ET + ++K AL VCG + +DALDRLND+ ++++ + ++L S SKI+DLKTWLS +TD +TC D+L+EL N T+ N+T+ LK+AM NS+E+ SNSLAI +KIL L++ IPIHRR L+ SE F W RRLLQ P+V VA DG+G +T+NEAV +V KK+ FVIYVK G Y ENV +DK +WNVMIYGDGK KTIISGS+NF+DGT T++TATF + G+GF+ KDI NT+GA KHQAVA RSGSD SV+Y C+FD +QDTLY HSNRQFYR+CD+ GTIDFIFG+AAVVFQ C I PRQPLPNQFNTITAQGKKDPNQN+G+SIQ+CTI+ GN+ A TYLGRPWKEFSTTVIM++ IG + P+GW WV+ VDPP++I+Y EY+NTGPGS V QRVKWAGY+S +S+ DA KFTVA + G DW+PA V ++ Sbjct: 1 MDSVNSFKGYGKVDEAQDLALKKKTRKRILLLTISVVVLVAVIIAAVIATVVHNKNDESA-PGSPHELTPSTSLKTICSVTRFPESCISSISKLPSSNTTDPETLFKLSLRVIIDELDSISDLPEKLSKETEDERIKSALRVCGDLIEDALDRLNDTVSAIDDTEKKTL-SSSKIEDLKTWLSATVTDHDTCFDSLDELKQNKTEYANSTIIHNLKSAMGNSTEFTSNSLAIVSKILAALSDLGIPIHRRRRLMSHHHQQQSEDFEEWA---RRRLLQTEGAKPDVTVAADGTGDVKTVNEAVLMVPKKSLKMFVIYVKSGTYNENVVMDKSKWNVMIYGDGKGKTIISGSKNFIDGTPTYETATFAIQGKGFVMKDIGIINTSGATKHQAVAFRSGSDFSVYYQCSFDGFQDTLYPHSNRQFYRDCDVTGTIDFIFGSAAVVFQGCKIMPRQPLPNQFNTITAQGKKDPNQNSGMSIQRCTISANGNVIAPTYLGRPWKEFSTTVIMETEIGPVVRPIGWMSWVSGVDPPASIVYGEYKNTGPGSDVTQRVKWAGYKSVMSDEDAAKFTVATLLHGSDWIPATGVTHQ 584
BLAST of g.arboreum_cottongen_reftransV1_0010388 vs. ExPASy TrEMBL
Match: Q0WWC7_ARATH (Pectinesterase OS=Arabidopsis thaliana GN=At1g53840 PE=2 SV=1) HSP 1 Score: 669.848 bits (1727), Expect = 0.000e+0 Identity = 361/586 (61.60%), Postives = 450/586 (76.79%), Query Frame = 1 Query: 58 MDSIKSFKGYGKVDEAEERAFKRKTRRRXXXXXXXXXXXXXXXXXXXXGTLIHK-RNNSSPDTASPTELTPAASLKAVCEVTQYPXXXXXXXXXXXXXNATDPEILFKLSLKVVIDELSGLSQYPKKLQAETNNTQVKHALDVCGTVFDDALDRLNDSATSLEVGDGESLLSDSKIDDLKTWLSTVITDQETCLDALEEL--NTTKNFNATLFEELKAAMQNSSEYASNSLAIAAKILGLLTNFRIPIHRR--LLGFQKAAPSEFPAWVSPTERRLLQESKPTPNVIVAKDGSGHFRTINEAVQLVGKKNQSRFVIYVKEGKYVENVNLDKHRWNVMIYGDGKTKTIISGSRNXXXXXXXXXXXXXXXXXRGFIAKDIKFENTAGAAKHQAVAMRSGSDRSVFYSCAFDAYQDTLYAHSNRQFYRECDILGTIDFIFGNAAVVFQNCNIQPRQPLPNQFNTITAQGKKDPNQNTGISIQKCTITPFGNLTANTYLGRPWKEFSTTVIMQSNIGAFLNPVGWREWVTNVDPPSTILYAEYQNTGPGSTVDQRVKWAGYRSTLSEADAGKFTVANFIQGEDWLPAATV 1800 MDS+ SFKGYGKVDEA++ A K+KTR+RL++L IS++VL+AVII AV T++HK +N S+P + P ELTP+ SLKA+C VT++P SC SSIS + SSN TDPE LFKLSLKV+IDEL +S P+KL ET + ++K AL VCG + +DALDRLND+ ++++ + + LS SKI+DLKTWLS +TD ETC D+L+EL N T+ N+T+ + LK+AM S+E+ SNSLAI +KIL L++ IPIHRR L+ +F W RRLLQ + P+V VA DG+G T+NEAV V KK+ FVIYVK G YVENV +DK +WNVMIYGDGK KTIISGS+NFVDGT T++TATF + G+GFI KDI NTAGAAKHQAVA RSGSD SV+Y C+FD +QDTLY HSNRQFYR+CD+ GTIDFIFG+AAVVFQ C I PRQPL NQFNTITAQGKKDPNQ++G+SIQ+CTI+ GN+ A TYLGRPWKEFSTTVIM++ IGA + P GW WV+ VDPP++I+Y EY+NTGPGS V QRVKWAGY+ +S+A+A KFTVA + G DW+PA V Sbjct: 1 MDSVNSFKGYGKVDEAQDLALKKKTRKRLLLLSISVVVLIAVIIAAVVATVVHKNKNESTP--SPPPELTPSTSLKAICSVTRFPESCISSISKLPSSNTTDPETLFKLSLKVIIDELDSISDLPEKLSKETEDERIKSALRVCGDLIEDALDRLNDTVSAIDDEEKKKTLSSSKIEDLKTWLSATVTDHETCFDSLDELKQNKTEYANSTITQNLKSAMSRSTEFTSNSLAIVSKILSALSDLGIPIHRRRRLMSHHHQQSVDFEKWA---RRRLLQTAGLKPDVTVAGDGTGDVLTVNEAVAKVPKKSLKMFVIYVKSGTYVENVVMDKSKWNVMIYGDGKGKTIISGSKNFVDGTPTYETATFAIQGKGFIMKDIGIINTAGAAKHQAVAFRSGSDFSVYYQCSFDGFQDTLYPHSNRQFYRDCDVTGTIDFIFGSAAVVFQGCKIMPRQPLSNQFNTITAQGKKDPNQSSGMSIQRCTISANGNVIAPTYLGRPWKEFSTTVIMETVIGAVVRPSGWMSWVSGVDPPASIVYGEYKNTGPGSDVTQRVKWAGYKPVMSDAEAAKFTVATLLHGADWIPATGV 581
BLAST of g.arboreum_cottongen_reftransV1_0010388 vs. ExPASy TrEMBL
Match: Q8LA06_ARATH (Pectinesterase OS=Arabidopsis thaliana PE=2 SV=1) HSP 1 Score: 669.463 bits (1726), Expect = 0.000e+0 Identity = 361/586 (61.60%), Postives = 450/586 (76.79%), Query Frame = 1 Query: 58 MDSIKSFKGYGKVDEAEERAFKRKTRRRXXXXXXXXXXXXXXXXXXXXGTLIHK-RNNSSPDTASPTELTPAASLKAVCEVTQYPXXXXXXXXXXXXXNATDPEILFKLSLKVVIDELSGLSQYPKKLQAETNNTQVKHALDVCGTVFDDALDRLNDSATSLEVGDGESLLSDSKIDDLKTWLSTVITDQETCLDALEEL--NTTKNFNATLFEELKAAMQNSSEYASNSLAIAAKILGLLTNFRIPIHRR--LLGFQKAAPSEFPAWVSPTERRLLQESKPTPNVIVAKDGSGHFRTINEAVQLVGKKNQSRFVIYVKEGKYVENVNLDKHRWNVMIYGDGKTKTIISGSRNXXXXXXXXXXXXXXXXXRGFIAKDIKFENTAGAAKHQAVAMRSGSDRSVFYSCAFDAYQDTLYAHSNRQFYRECDILGTIDFIFGNAAVVFQNCNIQPRQPLPNQFNTITAQGKKDPNQNTGISIQKCTITPFGNLTANTYLGRPWKEFSTTVIMQSNIGAFLNPVGWREWVTNVDPPSTILYAEYQNTGPGSTVDQRVKWAGYRSTLSEADAGKFTVANFIQGEDWLPAATV 1800 MDS+ SFKGYGKVDEA++ A K+KTR+RL++L IS++VL+AVII AV T++HK +N S+P + P ELTP+ SLKA+C VT++P SC SSIS + SSN TDPE LFKLSLKV+IDEL +S P+KL ET + ++K AL VCG + +DALDRLND+ ++++ + + LS SKI+DLKTWLS +TD ETC D+L+EL N T+ N+T+ + LK+AM S+E+ SNSLAI +KIL L++ IPIHRR L+ +F W RRLLQ + P+V VA DG+G T+NEAV V KK+ FVIYVK G YVENV +DK +WNVMIYGDGK KTIISGS+NFVDGT T++TATF + G+GFI KDI NTAGAAKHQAVA RSGSD SV+Y C+FD +QDTLY HSNRQFYR+CD+ GTIDFIFG+AAVVFQ C I PRQPL NQFNTITAQGKKDPNQ++G+SIQ+CTI+ GN+ A TYLGRPWKEFSTTVIM++ IGA + P GW WV+ VDPP++I+Y EY+NTGPGS V QRVKWAGY+ +S+A+A KFTVA + G DW+PA V Sbjct: 1 MDSVNSFKGYGKVDEAQDLALKKKTRKRLLLLSISVVVLIAVIIAAVVATVVHKNKNESTP--SPPPELTPSTSLKAICSVTRFPESCISSISKLPSSNTTDPETLFKLSLKVIIDELDSISDLPEKLSKETEDERIKSALRVCGDLIEDALDRLNDTVSAIDDEEKKKTLSSSKIEDLKTWLSATVTDHETCFDSLDELKQNKTEYANSTITQNLKSAMSRSTEFTSNSLAIVSKILSALSDLGIPIHRRRRLMSHHHQQSVDFEKWA---RRRLLQTAGLKPDVTVAGDGTGDVLTVNEAVAKVPKKSLKMFVIYVKSGTYVENVVMDKSKWNVMIYGDGKGKTIISGSKNFVDGTPTYETATFAIQGKGFIMKDIGIINTAGAAKHQAVAFRSGSDFSVYYQCSFDGFQDTLYPHSNRQFYRDCDVTGTIDFIFGSAAVVFQGCKIMPRQPLSNQFNTITAQGKKDPNQSSGMSIQRCTISTNGNVIAPTYLGRPWKEFSTTVIMETVIGAVVRPSGWMSWVSGVDPPASIVYGEYKNTGPGSDVTQRVKWAGYKPVMSDAEAAKFTVATLLHGADWIPATGV 581
BLAST of g.arboreum_cottongen_reftransV1_0010388 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2) HSP 1 Score: 353.984 bits (907), Expect = 3.653e-111 Identity = 224/548 (40.88%), Postives = 307/548 (56.02%), Query Frame = 1 Query: 259 LTPA--ASLKAVCEVTQYPXXXXXXXXXXXXXNATDPEILFKLSLKVVIDELSGLSQYPKKLQAETNNT--QVKHALDVCGTVFDDALDRLNDSATSLEVGDGESLLSDSKIDDLKTWLSTVITDQETCLDALEELNTTKNFNATLFEELKAAMQNSSEYASNSLAIAAKILGL-LTNF----RIPIHRRLL--------------GFQKAAPSEFPAWVSPTERRLLQESKPTPNVIVAKDGSGHFRTINEAVQLVGKKNQSRFVIYVKEGKYVENVNLDKHRWNVMIYGDGKTKTIISGSRNXXXXXXXXXXXXXXXXXRGFIAKDIKFENTAGAAKHQAVAMRSGSDRSVFYSCAFDAYQDTLYAHSNRQFYRECDILGTIDFIFGNAAVVFQNCNIQPRQPLPNQFNTITAQGKKDPNQNTGISIQKCTITPFGNLTA-----NTYLGRPWKEFSTTVIMQSNIGAFLNPVGWREWVTNVDPPSTILYAEYQNTGPGSTVDQRVKWAGYRSTLSEADAGKFTVANFIQGEDWLPAATVAYEPAL 1818 L+P+ A L++ C T+YP C S++ + T + + + S+ + I + KKL + + K AL C D+ LD L+++ L + + L + DLKT +S+ IT+QETCLD + K L LK + + SN+LA+ + + NF +I + R L G + +P W+S +RRLLQ S + VA DGSG F+T+ AV + + R+VI++K G Y ENV + K + N+M GDG+T+TII+GSRN VDG+ TF +AT G F+A+DI F+NTAG +KHQAVA+R GSD S FY+C AYQDTLY HSNRQF+ +C I GT+DFIFGNAAVV Q+C+I R+P Q N +TAQG+ DPNQNTGI IQKC I +L + TYLGRPWKE+S TVIMQS I + P GW EW T +T+ Y EY NTG G+ RVKW G++ + A+A K+T FI G WL + + L Sbjct: 51 LSPSSHAVLRSSCSSTRYPELCISAVVTAGGVELTSQKDVIEASVNLTITAVEHNYFTVKKLIKKRKGLTPREKTALHDCLETIDETLDELHETVEDLHLYPTKKTLRE-HAGDLKTLISSAITNQETCLDGFSHDDADKQVRKAL---LKGQI-HVEHMCSNALAMIKNMTDTDIANFEQKAKITSNNRKLKEENQETTVAVDIAGAGELDSEGWPTWLSAGDRRLLQGSGVKADATVAADGSGTFKTVAAAVAAAPENSNKRYVIHIKAGVYRENVEVAKKKKNIMFMGDGRTRTIITGSRNVVDGSTTFHSATVAAVGERFLARDITFQNTAGPSKHQAVALRVGSDFSAFYNCDMLAYQDTLYVHSNRQFFVKCLIAGTVDFIFGNAAVVLQDCDIHARRPNSGQKNMVTAQGRTDPNQNTGIVIQKCRIGATSDLQSVKGSFPTYLGRPWKEYSQTVIMQSAISDVIRPEGWSEW-TGTFALNTLTYREYSNTGAGAGTANRVKWRGFKVITAAAEAQKYTAGQFIGGGGWLSSTGFPFSLGL 592
BLAST of g.arboreum_cottongen_reftransV1_0010388 vs. ExPASy Swiss-Prot
Match: PME22_SOLLC (Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2.2 PE=3 SV=1) HSP 1 Score: 352.058 bits (902), Expect = 5.029e-111 Identity = 202/469 (43.07%), Postives = 278/469 (59.28%), Query Frame = 1 Query: 433 KLQAETNNTQVKHALDVCGTVFDDALDRLNDSATSLEVGDGESLLSDSKIDDLKTWLSTVITDQETCLDALEELNTTKNFNATLFEELKAAMQNSSEYASNSLAIAAKILGLLTNFRIPIHRRLLGFQKAAPSEFPAWVSPTERRLLQESKPT--PNVIVAKDGSGHFRTINEAVQLVGKKNQSRFVIYVKEGKYVENVNLDKHRWNVMIYGDGKTKTIISGSRNXXXXXXXXXXXXXXXXXRGFIAKDIKFENTAGAAKHQAVAMRSGSDRSVFYSCAFDAYQDTLYAHSNRQFYRECDILGTIDFIFGNAAVVFQNCNIQPRQPLPNQFNTITAQGKKDPNQNTGISIQKCTITPFGNLTA-----NTYLGRPWKEFSTTVIMQSNIGAFLNPVGWREWVTNVDPPSTILYAEYQNTGPGSTVDQRVKWAGYRSTLSEADAGKFTVANFIQGEDWLPAATVAYEPAL 1818 K++ + N+ + + AL C + D ++D ++DS +++ + S+ + ++WLS V+T+ TCLD L+ T N T +EL + + +A +L +T + R LG + P+WVS +R+L++ S N +VAKDG+G +RT+ EAV K+++R+VIYVK G Y ENV + + +MI GDG TII+G+ N VDG+ TF +AT G+GFI +DI +NTAG AKHQAVA+R G+D+SV C DAYQDTLYAHS RQFYR+ + GTIDFIFGNAAVVFQ C + R+P Q N +TAQG+ DPNQ TG SIQ C I +L TYLGRPWK++S TV+M+S +G +NP GW EW + T+ Y E+ N GPG+ +RVKW GY A+A FTVA IQG WL + VAY L Sbjct: 106 KMKNQINDIRQEGALTDCLELLDQSVDLVSDSIAAIDK------RTHSEHANAQSWLSGVLTNHVTCLDELDSF-TKAMINGTNLDELISRAK-----------VALAMLASVTTPNDDVLRPGLG-------KMPSWVSSRDRKLMESSGKDIGANAVVAKDGTGKYRTLAEAVAAAPDKSKTRYVIYVKRGIYKENVEVSSRKMKLMIVGDGMHATIITGNLNVVDGSTTFHSATLAAVGKGFILQDICIQNTAGPAKHQAVALRVGADKSVINRCRIDAYQDTLYAHSQRQFYRDSYVTGTIDFIFGNAAVVFQKCKLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCNIIASSDLEPVLKEFPTYLGRPWKKYSRTVVMESYLGGLINPAGWAEWDGDF-ALKTLYYGEFMNNGPGAGTSKRVKWPGYHCITDPAEAMPFTVAKLIQGGSWLRSTGVAYVDGL 548
BLAST of g.arboreum_cottongen_reftransV1_0010388 vs. ExPASy Swiss-Prot
Match: PME45_ARATH (Putative pectinesterase/pectinesterase inhibitor 45 OS=Arabidopsis thaliana GN=PME45 PE=2 SV=1) HSP 1 Score: 352.829 bits (904), Expect = 1.235e-110 Identity = 208/491 (42.36%), Postives = 289/491 (58.86%), Query Frame = 1 Query: 355 TDPEILFKLSLKVVIDELSGLSQYPKKLQAETNNTQVKHALDVCGTVFDDALDRLNDSATSLEVGDGESLLSDSKIDDLKTWLSTVITDQETCLDALEELNTTKNFNATLFEELKAAMQNSSEYASNSLAIAAKILGLLTNFRIP-IHRRLLGFQKAAPSE---FPAWVSPTERRLLQE---SKPTPNVIVAKDGSGHFRTINEAVQLVGKKNQSRFVIYVKEGKYVENVNLDKHRWNVMIYGDGKTKTIISGSRNXXXXXXXXXXXXXXXXXRGFIAKDIKFENTAGAAKHQAVAMRSGSDRSVFYSCAFDAYQDTLYAHSNRQFYRECDILGTIDFIFGNAAVVFQNCNIQPRQPLPNQFNTITAQGKKDPNQNTGISIQKCTITPFGNLTA-----NTYLGRPWKEFSTTVIMQSNIGAFLNPVGWREWVTNVDPPSTILYAEYQNTGPGSTVDQRVKWAGYRSTLSEADAGKFTVANFIQGEDWLPA 1791 TDP L K ++ V D+L + + + L +T N K A+ C + D+A + L S + D E + DL +WLS V++ QETC+D EE L E++ +S SNSLA+ + G L++ +P + RLL +++ E +W+S ERR+L+ PN VAKDGSG+F TIN A++ + K Q R+ IY+K G Y E+V +DK + NV + GDG KTI++G+++ TF TATF G GF+A+ + F NTAG HQAVA+R SDRSVF +C F+ YQDTLYA+++RQ+YR C I+GT+DFIFG+AA +FQNC+I R+ LP Q NT+TAQG+ D Q TG I CT+ P +L +YLGRPWK S TV+M+S I ++PVGW W T+ YAEY+N GP RVKW G+R L++ +A KFTV F+QGE W+ A Sbjct: 123 TDPRSLLKSAIVAVNDDLDQV--FKRVLSLKTENKDDKDAIAQCKLLVDEAKEELGTSMK--RINDSEVNNFAKIVPDLDSWLSAVMSYQETCVDGFEE--------GKLKTEIRKNFNSSQVLTSNSLAMIKSLDGYLSS--VPKVKTRLLLEARSSAKETDHITSWLSNKERRMLKAVDVKALKPNATVAKDGSGNFTTINAALKAMPAKYQGRYTIYIKHGIYDESVIIDKKKPNVTMVGDGSQKTIVTGNKSHAKKIRTFLTATFVAQGEGFMAQSMGFRNTAGPEGHQAVAIRVQSDRSVFLNCRFEGYQDTLYAYTHRQYYRSCVIIGTVDFIFGDAAAIFQNCDIFIRKGLPGQKNTVTAQGRVDKFQTTGFVIHNCTVAPNEDLKPVKAQFKSYLGRPWKPHSRTVVMESTIEDVIDPVGWLRWQETDFAIDTLSYAEYKNDGPSGATAARVKWPGFR-VLNKEEAMKFTVGPFLQGE-WIQA 597
BLAST of g.arboreum_cottongen_reftransV1_0010388 vs. ExPASy Swiss-Prot
Match: PME18_ARATH (Pectinesterase/pectinesterase inhibitor 18 OS=Arabidopsis thaliana GN=PME18 PE=1 SV=3) HSP 1 Score: 350.132 bits (897), Expect = 3.503e-110 Identity = 204/492 (41.46%), Postives = 289/492 (58.74%), Query Frame = 1 Query: 370 LFKLSLKVVIDELSGLSQYPKKLQAETNNTQVKHALDVCGTVFDDALDRLNDSATSLEVGDGESLLSDSKIDDLKTWLSTVITDQETCLDALEELNTTKNFNATLFEELKAAMQNSSEYASNSLAIAAKILGLLTNFRIPIHRRLLGFQKAAPSEFPAWVSPTERRLLQES----KPTPNVIVAKDGSGHFRTINEAVQLVGKKNQSRFVIYVKEGKYVENVNLDKHRWNVMIYGDGKTKTIISGSRNXXXXXXXXXXXXXXXXXRGFIAKDIKFENTAGAAKHQAVAMRSGSDRSVFYSCAFDAYQDTLYAHSNRQFYRECDILGTIDFIFGNAAVVFQNCNIQPRQPLPNQFNTITAQGKKDPNQNTGISIQKCTITPFGNL-----TANTYLGRPWKEFSTTVIMQSNIGAFLNPVGWREWVTNVDPPSTILYAEYQNTGPGSTVDQRVKWAGYRSTLSEADAGKFTVANFIQGEDWLPAATVAYEPAL 1818 L + LK + L + + +N + K C + D + DR+ S L G +L S S + TWLS+V+T+ TCL+++ +++ + +K +++ A +LAI +L + ++ I R FP+W++ +R+LL+ S K T NV+VAKDG+G F+T+NEAV + + +R+VIYVK+G Y E +++ K + N+M+ GDGK TII+GS N +DG+ TF +AT G GF+A+DI F+NTAG AKHQAVA+R +D++V C DAYQDTLY H+ RQFYR+ I GT+DFIFGN+AVVFQNC+I R P Q N +TAQG++D NQNT ISIQKC IT +L + T+LGRPWK +S TVIMQS I ++P GW W ST+ Y EY NTGPG+ +RV W G++ +A +FTVA IQG WL V ++ L Sbjct: 88 LLHVFLKNSVWRLESTMTMVSEARIRSNGVRDKAGFADCEEMMDVSKDRMMSSMEELR-GGNYNLESYSNV---HTWLSSVLTNYMTCLESISDVSVNSK------QIVKPQLEDLVSRARVALAIFVSVLPARDDLKMIISNR-----------FPSWLTALDRKLLESSPKTLKVTANVVVAKDGTGKFKTVNEAVAAAPENSNTRYVIYVKKGVYKETIDIGKKKKNLMLVGDGKDATIITGSLNVIDGSTTFRSATVAANGDGFMAQDIWFQNTAGPAKHQAVALRVSADQTVINRCRIDAYQDTLYTHTLRQFYRDSYITGTVDFIFGNSAVVFQNCDIVARNPGAGQKNMLTAQGREDQNQNTAISIQKCKITASSDLAPVKGSVKTFLGRPWKLYSRTVIMQSFIDNHIDPAGWFPWDGEF-ALSTLYYGEYANTGPGADTSKRVNWKGFKVIKDSKEAEQFTVAKLIQGGLWLKPTGVTFQEWL 557
BLAST of g.arboreum_cottongen_reftransV1_0010388 vs. ExPASy Swiss-Prot
Match: PME41_ARATH (Probable pectinesterase/pectinesterase inhibitor 41 OS=Arabidopsis thaliana GN=PME41 PE=2 SV=2) HSP 1 Score: 350.132 bits (897), Expect = 5.315e-110 Identity = 217/503 (43.14%), Postives = 290/503 (57.65%), Query Frame = 1 Query: 415 LSQYPKKLQAETNNTQVKHALDVCGTVFDDALDRLNDSATSLEVGDGESLLSDSKIDDLKTWLSTVITDQETCLDALEELNTTKNFNATLFEELKAAMQNSSEYASNSLAIAAKILGLLTNFRIPI-----------HRRLLGFQKAAPSEFP---------AWVSPTERRLLQESKPTPNVIVA------KDGSGHFRTINEAVQLVGKKNQSR---FVIYVKEGKYVENVNLDKHRWNVMIYGDGKTKTIISGSRNXXXXXXXXXXXXXXXXXRGFIAKDIKFENTAGAAKHQAVAMRSGSDRSVFYSCAFDAYQDTLYAHSNRQFYRECDILGTIDFIFGNAAVVFQNCNIQPRQPLPNQFNTITAQGKKDPNQNTGISIQKCTITPF-----GNLTANTYLGRPWKEFSTTVIMQSNIGAFLNPVGWREWVTNVD-PPSTILYAEYQNTGPGSTVDQRVKWAGYRSTLSEADAGKFTVANFIQGEDWLPAATVAYEPAL 1818 + +Y K+ A + + V AL C + D L S ++ + LS SK D+++T LS +T+++TCLD + NT + + T+ + + N ++ S SLA+ K G + + + H F+ P + S + R+L + V+V+ ++G+G+F TI EAV K FVIYV G Y ENV + K++ +M+ GDG +T+++G+RN VDG TF++ATF V F+A ++ F NTAG KHQAVAMRS +D S+FYSC+F+AYQDTLY HS RQFYRECDI GT+DFIFGNAAVVFQ+CN+ PRQP+ NQFN ITAQG+ DPNQNTGISI CTI P N T TYLGRPWKE+S TV MQS I + PVGWREW N D ST+ YAEY NTG GS+ RV W GY ++ DA FTV NF+ G+ W+ + V Y L Sbjct: 78 IDRYLKRNNALLSQSAVG-ALQDCRYLASLTTDYLITSFETVNITTSSKTLSFSKADEIQTLLSAALTNEQTCLDGI---NTAASSSWTIRNGVALPLINDTKLFSVSLALFTK--GWVPKKKKQVASYSWAHPKNTHSHTKPFRHFRNGALPLKMTEHTRAVYESLSRRKLADDDNDVNTVLVSDIVTVNQNGTGNFTTITEAVNSAPNKTDGTAGYFVIYVTSGVYEENVVIAKNKRYLMMIGDGINRTVVTGNRNVVDGWTTFNSATFAVTSPNFVAVNMTFRNTAGPEKHQAVAMRSSADLSIFYSCSFEAYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAVVFQDCNLYPRQPMQNQFNAITAQGRTDPNQNTGISIHNCTIKPADDLVSSNYTVKTYLGRPWKEYSRTVFMQSYIDEVVEPVGWREW--NGDFALSTLYYAEYNNTGSGSSTTDRVVWPGYH-VINSTDANNFTVENFLLGDGWMVQSGVPYISGL 571 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0010388 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0010388 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0010388 ID=g.arboreum_cottongen_reftransV1_0010388; Name=g.arboreum_cottongen_reftransV1_0010388; organism=Gossypium arboreum; type=contig; length=1961bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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