g.arboreum_cottongen_reftransV1_0018080, g.arboreum_cottongen_reftransV1_0018080 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0018080
Unique Nameg.arboreum_cottongen_reftransV1_0018080
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length569
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr1chromosomeg.arboreum_cottongen_reftransV1_0018080:1..569 .
Chr1:2444765..2445569 +
Homology
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BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy TrEMBL
Match: A0A067KCX6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07563 PE=4 SV=1)

HSP 1 Score: 342.813 bits (878), Expect = 2.508e-105
Identity = 161/190 (84.74%), Postives = 179/190 (94.21%), Query Frame = -2 
Query:    2 LNLALPKQKSAVDAKSESESIIKQTQAIIRNQGAKR-VFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFITTTPVIAASVMHGSNQISRDAVVQSLKELAGKP 568
            LNLALPK+KS+ DAKSESE+IIKQTQAI R QGA+R +F+T Q+IE+++PMVEAVGW LLATFSVTMEEGEN+PRV LCMEGFKAGIHIT+VLGMDTMRYAFLTSLVRFTFLHAPK+MRSKNVEALRTLL L DSE DSLQDTWNAVLECVSRLEFIT+TP IAA+VMHGSNQISRDA++QSL+ELAGKP
Sbjct:  807 LNLALPKRKSSADAKSESEAIIKQTQAIFRKQGARRGIFHTVQQIEIIRPMVEAVGWPLLATFSVTMEEGENKPRVVLCMEGFKAGIHITHVLGMDTMRYAFLTSLVRFTFLHAPKEMRSKNVEALRTLLALSDSETDSLQDTWNAVLECVSRLEFITSTPAIAATVMHGSNQISRDAILQSLRELAGKP 996
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy TrEMBL
Match: A0A0A0L3W2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G126980 PE=4 SV=1)

HSP 1 Score: 339.347 bits (869), Expect = 5.127e-104
Identity = 161/190 (84.74%), Postives = 179/190 (94.21%), Query Frame = -2 
Query:    2 LNLALPKQKSAVDAKSESESIIKQTQAIIRNQGAKR-VFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFITTTPVIAASVMHGSNQISRDAVVQSLKELAGKP 568
            LNLALP++KS+ +A+SESE+IIKQTQ I RNQGAKR VFYT+Q IELV+PMVEAVGW LLATFSVTMEEG+N+PRV LCMEGF+AGIHIT+VLGMDTMRYAFLTSLVRFTFLHAPK+MRSKNVEALRTLL LCD E +SLQDTWNAVLECVSRLEFIT+TP IAA+VM+GSNQISRDAVVQSL+ELAGKP
Sbjct:  795 LNLALPRRKSSTEAQSESEAIIKQTQVIFRNQGAKRGVFYTSQRIELVRPMVEAVGWPLLATFSVTMEEGDNKPRVVLCMEGFRAGIHITHVLGMDTMRYAFLTSLVRFTFLHAPKEMRSKNVEALRTLLALCDLETESLQDTWNAVLECVSRLEFITSTPSIAATVMYGSNQISRDAVVQSLRELAGKP 984
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy TrEMBL
Match: B9RR10_RICCO (Guanine nucleotide-exchange, putative OS=Ricinus communis GN=RCOM_0708240 PE=4 SV=1)

HSP 1 Score: 338.576 bits (867), Expect = 6.641e-104
Identity = 159/190 (83.68%), Postives = 176/190 (92.63%), Query Frame = -2 
Query:    2 LNLALPKQKSAVDAKSESESIIKQTQAIIRNQGAKR-VFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFITTTPVIAASVMHGSNQISRDAVVQSLKELAGKP 568
            LNL LPK+K + DAKSES +IIKQTQAI R QG +R +F+T Q++E+V+PMVEAVGW LLATFSVTMEEGEN+PRV LCMEGFKAGIHIT+VLGMDTMRYAFLTSLVRFTFLHAPK+MRSKNVEALRTLL LCDSE DSLQDTWNAVLECVSRLEFIT+TP IAA+VMHGSNQISRDAV+QSL+ELAGKP
Sbjct:  804 LNLGLPKRKLSTDAKSESAAIIKQTQAIFRKQGVRRGIFHTVQQVEIVRPMVEAVGWPLLATFSVTMEEGENKPRVVLCMEGFKAGIHITHVLGMDTMRYAFLTSLVRFTFLHAPKEMRSKNVEALRTLLALCDSETDSLQDTWNAVLECVSRLEFITSTPSIAATVMHGSNQISRDAVLQSLRELAGKP 993
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy TrEMBL
Match: M0WUL9_HORVD (Uncharacterized protein OS=Hordeum vulgare var. distichum PE=4 SV=1)

HSP 1 Score: 321.627 bits (823), Expect = 1.610e-103
Identity = 151/190 (79.47%), Postives = 173/190 (91.05%), Query Frame = -2 
Query:    2 LNLALPKQKSAVDAKSESESIIKQTQAIIRNQGAKR-VFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFITTTPVIAASVMHGSNQISRDAVVQSLKELAGKP 568
            LNLALP+ KSA D K+ESE IIKQTQA+ +NQG KR VF+ AQ++ELV+PM+EAVGW LLATFSVTMEEG+N+PRV LCMEGFKAGIH+T VLGM+TMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLL L D++ D+LQD WNAVLECVSRLE+IT++P +AA+VM GSNQISRD+VVQSLKELAGKP
Sbjct:  334 LNLALPRLKSASDTKAESEKIIKQTQAVFKNQGQKRGVFHVAQQVELVRPMLEAVGWPLLATFSVTMEEGDNKPRVVLCMEGFKAGIHLTRVLGMETMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLALADTDMDALQDAWNAVLECVSRLEYITSSPSMAATVMQGSNQISRDSVVQSLKELAGKP 523
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy TrEMBL
Match: V7CB72_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G126000g PE=4 SV=1)

HSP 1 Score: 336.65 bits (862), Expect = 4.129e-103
Identity = 160/190 (84.21%), Postives = 180/190 (94.74%), Query Frame = -2 
Query:    2 LNLALPKQKSAVDAKSESESIIKQTQAIIRNQGAKR-VFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFITTTPVIAASVMHGSNQISRDAVVQSLKELAGKP 568
            LNLALPK+KS+ DAKSESE+IIK+TQAI RNQG KR VFYTAQ+IELV+PMVEAVGW LLATFSVTMEEG+N+PRV L MEGF+AGIHIT+VLGMDTMRYAFLTSLVRFTFLHAPK+MRSKNVEALRTLL LC+S+ ++LQDTWNAVLECVSRLEFIT+TP I+A+VMHGSNQIS+DAVVQSL+ELAGKP
Sbjct:  798 LNLALPKRKSSEDAKSESEAIIKKTQAIFRNQGVKRGVFYTAQQIELVRPMVEAVGWPLLATFSVTMEEGDNKPRVVLLMEGFRAGIHITFVLGMDTMRYAFLTSLVRFTFLHAPKEMRSKNVEALRTLLVLCESDTNALQDTWNAVLECVSRLEFITSTPSISATVMHGSNQISKDAVVQSLRELAGKP 987
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy TrEMBL
Match: B9HCN1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s23350g PE=4 SV=2)

HSP 1 Score: 335.495 bits (859), Expect = 4.450e-103
Identity = 158/190 (83.16%), Postives = 177/190 (93.16%), Query Frame = -2 
Query:    2 LNLALPKQKSAVDAKSESESIIKQTQAIIRNQGAKR-VFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFITTTPVIAASVMHGSNQISRDAVVQSLKELAGKP 568
            LNLALPK+KS+ DAKSE+E+IIKQTQAI R QGA+R VF+T Q+IE+++PMVEAVGW LL TFSVTMEEG+N+PRV LCMEGFKAGIHIT+VLGMDTMRYAFLTSLVRFTFLHAPK+MRSKNVEALRTLL LCDSE DSLQDTWNAVLECVSRLE+IT+TP IA +VM GSNQISRDAV+QSL+ELAGKP
Sbjct:  635 LNLALPKRKSSTDAKSENEAIIKQTQAIFRKQGARRGVFHTVQQIEIIRPMVEAVGWPLLVTFSVTMEEGDNKPRVVLCMEGFKAGIHITHVLGMDTMRYAFLTSLVRFTFLHAPKEMRSKNVEALRTLLALCDSETDSLQDTWNAVLECVSRLEYITSTPSIAVTVMLGSNQISRDAVLQSLRELAGKP 824
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy TrEMBL
Match: V7CC95_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G126000g PE=4 SV=1)

HSP 1 Score: 336.265 bits (861), Expect = 4.805e-103
Identity = 160/190 (84.21%), Postives = 180/190 (94.74%), Query Frame = -2 
Query:    2 LNLALPKQKSAVDAKSESESIIKQTQAIIRNQGAKR-VFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFITTTPVIAASVMHGSNQISRDAVVQSLKELAGKP 568
            LNLALPK+KS+ DAKSESE+IIK+TQAI RNQG KR VFYTAQ+IELV+PMVEAVGW LLATFSVTMEEG+N+PRV L MEGF+AGIHIT+VLGMDTMRYAFLTSLVRFTFLHAPK+MRSKNVEALRTLL LC+S+ ++LQDTWNAVLECVSRLEFIT+TP I+A+VMHGSNQIS+DAVVQSL+ELAGKP
Sbjct:  798 LNLALPKRKSSEDAKSESEAIIKKTQAIFRNQGVKRGVFYTAQQIELVRPMVEAVGWPLLATFSVTMEEGDNKPRVVLLMEGFRAGIHITFVLGMDTMRYAFLTSLVRFTFLHAPKEMRSKNVEALRTLLVLCESDTNALQDTWNAVLECVSRLEFITSTPSISATVMHGSNQISKDAVVQSLRELAGKP 987
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy TrEMBL
Match: W5BAZ3_WHEAT (Uncharacterized protein OS=Triticum aestivum PE=4 SV=1)

HSP 1 Score: 312.383 bits (799), Expect = 8.842e-103
Identity = 147/190 (77.37%), Postives = 170/190 (89.47%), Query Frame = -2 
Query:    2 LNLALPKQKSAVDAKSESESIIKQTQAIIRNQGAKR-VFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFITTTPVIAASVMHGSNQISRDAVVQSLKELAGKP 568
            LNLALP+ KSA D K+ESE IIKQTQA+ +NQG KR VF+ AQ++ELV+PM+EAVGW LLATFSVTMEEG+N+PRV LCMEGFKAGIH+T VLGM+TMRYAFLTSLVRFTFLHAP++MRSKNVEALRTLL L D + D+LQD W AVLECVSRLE+IT+ P +AA+VM GSNQISRD+VVQSLKEL+GKP
Sbjct:  146 LNLALPRLKSASDTKAESEKIIKQTQAVFKNQGQKRGVFHVAQQVELVRPMLEAVGWPLLATFSVTMEEGDNKPRVVLCMEGFKAGIHLTRVLGMETMRYAFLTSLVRFTFLHAPREMRSKNVEALRTLLALADMDMDALQDAWTAVLECVSRLEYITSVPSMAATVMQGSNQISRDSVVQSLKELSGKP 335
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy TrEMBL
Match: A0A059CMB6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C00756 PE=4 SV=1)

HSP 1 Score: 335.495 bits (859), Expect = 1.612e-102
Identity = 157/190 (82.63%), Postives = 176/190 (92.63%), Query Frame = -2 
Query:    2 LNLALPKQKSAVDAKSESESIIKQTQAIIRNQGAKR-VFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFITTTPVIAASVMHGSNQISRDAVVQSLKELAGKP 568
            LNLALPK KS+VD K++S +I+KQTQAI RNQG KR VFY++Q IE+ KPMVEAVGW LLATFSVTMEEG+N+PR+ LCMEGFKAGIHIT+VLGMDTMRYAFLTSLVR TFLHAPKDMRSKNVEALRTLL LCD+E DSLQDTWNAVLECVSRLE+IT+TP I+A+VMHGSNQISRDAV+QSL+ELAGKP
Sbjct:  938 LNLALPKGKSSVDPKNDSAAIVKQTQAIFRNQGVKRGVFYSSQRIEIAKPMVEAVGWPLLATFSVTMEEGDNKPRIILCMEGFKAGIHITHVLGMDTMRYAFLTSLVRCTFLHAPKDMRSKNVEALRTLLALCDTETDSLQDTWNAVLECVSRLEYITSTPSISATVMHGSNQISRDAVLQSLRELAGKP 1127
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy TrEMBL
Match: I1LYC1_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=2)

HSP 1 Score: 334.339 bits (856), Expect = 2.344e-102
Identity = 160/190 (84.21%), Postives = 178/190 (93.68%), Query Frame = -2 
Query:    2 LNLALPKQKSAVDAKSESESIIKQTQAIIRNQGAKR-VFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEFITTTPVIAASVMHGSNQISRDAVVQSLKELAGKP 568
            LNLALPK+KS+ DAKSESE+IIK+TQAI RN+G KR VFYTAQ+IELV+PMVEAVGW LLATFSVTMEEG+N+PRV L MEGFKAGIHIT+VLGMDTMRYAFLTSLVRFTFLHAPK+MRSKNVEALRTLL LCDS+ ++LQDTWNAVLECVSRLEFIT+TP I+ +VMHGSNQIS+DAVVQSLKELA KP
Sbjct:  799 LNLALPKRKSSGDAKSESEAIIKKTQAIFRNKGVKRGVFYTAQQIELVRPMVEAVGWPLLATFSVTMEEGDNKPRVVLLMEGFKAGIHITFVLGMDTMRYAFLTSLVRFTFLHAPKEMRSKNVEALRTLLVLCDSDMNALQDTWNAVLECVSRLEFITSTPSISVTVMHGSNQISKDAVVQSLKELAAKP 988
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy Swiss-Prot
Match: BIG1_RAT (Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Rattus norvegicus GN=Arfgef1 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.766e-15
Identity = 36/121 (29.75%), Postives = 71/121 (58.68%), Query Frame = -2 
Query:  104 FYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPK---DMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEF 457
            F +A  +E V+PM +      LA FSV +++ ++    +LC+EG +  I I  +  +   R A++ +L RFT L       +M+ KN++ ++TL+ +  ++ + L ++W+ +L+C+S+LE 
Sbjct:  933 FTSATHLEHVRPMFKLAWTPFLAAFSVGLQDCDDTDVASLCLEGIRCAIRIACIFSIQLERDAYVQALARFTLLTVSSGITEMKQKNIDTIKTLITVAHTDGNYLGNSWHEILKCISQLEL 1053
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy Swiss-Prot
Match: BIG1_MOUSE (Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Mus musculus GN=Arfgef1 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.900e-15
Identity = 36/121 (29.75%), Postives = 71/121 (58.68%), Query Frame = -2 
Query:  104 FYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPK---DMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEF 457
            F +A  +E V+PM +      LA FSV +++ ++    +LC+EG +  I I  +  +   R A++ +L RFT L       +M+ KN++ ++TL+ +  ++ + L ++W+ +L+C+S+LE 
Sbjct:  933 FTSATHLEHVRPMFKLAWTPFLAAFSVGLQDCDDTEVASLCLEGIRCAIRIACIFSIQLERDAYVQALARFTLLTVSSGITEMKQKNIDTIKTLITVAHTDGNYLGNSWHEILKCISQLEL 1053
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy Swiss-Prot
Match: BIG1_HUMAN (Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Homo sapiens GN=ARFGEF1 PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 1.900e-15
Identity = 36/121 (29.75%), Postives = 71/121 (58.68%), Query Frame = -2 
Query:  104 FYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPK---DMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEF 457
            F +A  +E V+PM +      LA FSV +++ ++    +LC+EG +  I I  +  +   R A++ +L RFT L       +M+ KN++ ++TL+ +  ++ + L ++W+ +L+C+S+LE 
Sbjct:  936 FTSATHLEHVRPMFKLAWTPFLAAFSVGLQDCDDTEVASLCLEGIRCAIRIACIFSIQLERDAYVQALARFTLLTVSSGITEMKQKNIDTIKTLITVAHTDGNYLGNSWHEILKCISQLEL 1056
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy Swiss-Prot
Match: BIG1_BOVIN (Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Bos taurus GN=ARFGEF1 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.971e-15
Identity = 36/121 (29.75%), Postives = 71/121 (58.68%), Query Frame = -2 
Query:  104 FYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPK---DMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLEF 457
            F +A  +E V+PM +      LA FSV +++ ++    +LC+EG +  I I  +  +   R A++ +L RFT L       +M+ KN++ ++TL+ +  ++ + L ++W+ +L+C+S+LE 
Sbjct:  936 FTSATHLEHVRPMFKLAWTPFLAAFSVGLQDCDDTEVASLCLEGIRCAIRIACIFSIQLERDAYVQALARFTLLTVSSGITEMKQKNIDTIKTLITVAHTDGNYLGNSWHEILKCISQLEL 1056
[Close]
BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy Swiss-Prot
Match: SEC7_YEAST (Protein transport protein SEC7 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEC7 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 7.258e-13
Identity = 38/125 (30.40%), Postives = 68/125 (54.40%), Query Frame = -2 
Query:  107 RNQGAKRVFYTAQEIELVKPMVEAVGWSLLATFSVTMEEGENRPRVALCMEGFKAGIHITYVLGMDTMRYAFLTSLVRFTFLHAPKDMRSKNVEALRTLLGLCDSEPDSLQDTWNAVLECVSRLE 481
            +N+G   V+Y A  +E VK + E +  S LA  +   ++ ++      C+EG K  I I     ++  R +F+ +LV+F  L   ++++ KNV A+  LL +  SE + L+ +W  +L  VS++E
Sbjct: 1068 KNKGGPDVYYAASHVEHVKSIFETLWMSFLAALTPPFKDYDDIDTTNKCLEGLKISIKIASTFRINDARTSFVGALVQFCNLQNLEEIKVKNVNAMVILLEVALSEGNYLEGSWKDILLVVSQME 1192
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A067KCX6_JATCU2.508e-10584.74Uncharacterized protein OS=Jatropha curcas GN=JCGZ... [more]
A0A0A0L3W2_CUCSA5.127e-10484.74Uncharacterized protein OS=Cucumis sativus GN=Csa_... [more]
B9RR10_RICCO6.641e-10483.68Guanine nucleotide-exchange, putative OS=Ricinus c... [more]
M0WUL9_HORVD1.610e-10379.47Uncharacterized protein OS=Hordeum vulgare var. di... [more]
V7CB72_PHAVU4.129e-10384.21Uncharacterized protein OS=Phaseolus vulgaris GN=P... [more]
B9HCN1_POPTR4.450e-10383.16Uncharacterized protein OS=Populus trichocarpa GN=... [more]
V7CC95_PHAVU4.805e-10384.21Uncharacterized protein OS=Phaseolus vulgaris GN=P... [more]
W5BAZ3_WHEAT8.842e-10377.37Uncharacterized protein OS=Triticum aestivum PE=4 ... [more]
A0A059CMB6_EUCGR1.612e-10282.63Uncharacterized protein OS=Eucalyptus grandis GN=E... [more]
I1LYC1_SOYBN2.344e-10284.21Uncharacterized protein OS=Glycine max PE=4 SV=2[more]

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BLAST of g.arboreum_cottongen_reftransV1_0018080 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
BIG1_RAT1.766e-1529.75Brefeldin A-inhibited guanine nucleotide-exchange ... [more]
BIG1_MOUSE1.900e-1529.75Brefeldin A-inhibited guanine nucleotide-exchange ... [more]
BIG1_HUMAN1.900e-1529.75Brefeldin A-inhibited guanine nucleotide-exchange ... [more]
BIG1_BOVIN1.971e-1529.75Brefeldin A-inhibited guanine nucleotide-exchange ... [more]
SEC7_YEAST7.258e-1330.40Protein transport protein SEC7 OS=Saccharomyces ce... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR10663:SF189SH3 DOMAIN-CONTAINING PROTEINcoord: 10..56
coord: 138..187
NoneNo IPR availablePANTHERPTHR10663GUANYL-NUCLEOTIDE EXCHANGE FACTORcoord: 10..56
coord: 138..187

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0018080 ID=g.arboreum_cottongen_reftransV1_0018080; Name=g.arboreum_cottongen_reftransV1_0018080; organism=Gossypium arboreum; type=contig; length=569bp
CAGGTTTCCCAGCCAACTCTTTCAGTGACTGCACAACAGCATCCCTGGAG
ATCTGATTTGATCCATGCATGACACTTGCAGCAATAACAGGAGTTGTTGT
TATAAATTCAAGCCGAGAAACACATTCAAGAACAGCATTCCATGTGTCTT
GAAGAGAATCTGGTTCTGAGTCACATAAACCCAATAGAGTCCGCAATGCT
TCCACATTTTTACTACGCATATCCTTTGGGGCATGCAAGAAAGTAAACCT
GACTAGAGATGTTAAAAAGGCATAGCGCATTGTATCCATTCCGAGGACAT
ATGTGATATGTATCCCAGCTTTAAATCCTTCCATACAAAGAGCAACCCTC
GGCCTATTTTCACCTTCCTCCATTGTAACAGAGAAGGTAGCCAGCAATGA
CCATCCTACAGCTTCAACCATGGGTTTAACAAGTTCAATCTCTTGTGCAG
TGTAAAAAACTCTTTTTGCTCCTTGGTTTCGGATGATAGCCTGTGTCTGC
TTAATTATTGATTCACTTTCAGACTTAGCATCAACTGCTGATTTTTGTTT
AGGTAGAGCCAGATTAAGG
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