g.arboreum_cottongen_reftransV1_0005846, g.arboreum_cottongen_reftransV1_0005846 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0005846 vs. ExPASy TrEMBL
Match: V7AN32_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G098800g PE=4 SV=1) HSP 1 Score: 449.129 bits (1154), Expect = 1.627e-145 Identity = 326/618 (52.75%), Postives = 407/618 (65.86%), Query Frame = 1 Query: 112 ASSLKEYLXXXXXXXXXXXXXXXXXXXXXXXXXSSGVLVVDEDPVWQKPVNLEEDEGNDSPDE-KPLVDEDIEVKRMKRLEQIRLRRGYNAIAEDGSGWVSLSPKHANTVDPNSDISPPRR----------QRTRNDTPSPEPGLRHSNSEIEAKDLSPPRKPRSPGLKSDLSPPRRS-------RAHNET------TLTXXXXXXXXXXXXXXXXXXXXXXLKASRGGTDLSPPWKRRVRNGTPSPEPLVNRADGTDLSPPRKHRVRNDTPSPEPLVNRTDGTDLSPPRKRRVRNDTPSPEPLANR-AGADLSPPRKRRARNDTPSPKRRVKPLREGADSDMSPPQ--QRSRRRHTQSPEPDMSPPRQSHAQTSELVHDSDLSPPRKSRRESTGPASLKQQSKTGLISGSDIREEISKTKKDDWLRFKEMDPSVSGRGAEPVFRDKTKGERISKEEYLXXXXXXXXXXXXXXXXXXXXXLAQKREAETRLQELELEKSKPFARTRDDPELDNMLKDRLRWGDPMAHLVKKKQPELVLKDLGDAERMKESGFVVPQDIPPHSWIVRKLDAAPNRYGIRPGRHWDGVDRSNGFEKKMFTKLNEKRATEREAYLWSVSDM 1884 ++SLK+YLKRYET EE++K K+K+KKK++P+++G+LVVDEDP WQKP++LEE+ ++S DE KP VDEDI+VKRMKRLEQ+R RR Y+AI+EDGSGWVSLS N +D N+DISPPR+ Q RNDTPSP+ + S+++ D+SPPR+ R SPPRR R H+++ + A + + R D SPP RR ++ + +D D+SPPR R R+D+PS + ++ + DLSPPRK + +N S +NR + DLSPPR R+D+PS L SD+SPP+ Q++ R S P S S D DL+PPRK+ +ES+ PAS KTGLISG DIR+EI K K DD LRF +MDPS+SGRGAEPV+RDK KG RISKEEYLKSK+K E+ + + LAQKREAE RL+ELELEK KPFARTRDDPELD MLK+RLRWGDPMAHLVKKK PE VL +LG+ E+MKESGFVVPQDIP HSW+ R LDAA NRYGIRPGRHWDGVDRSNGFEK MF + NE++A +REAYLWSVSDM Sbjct: 3 SNSLKDYLKRYETNTVEEKKKTKKKQKKKSQPQTTGLLVVDEDPTWQKPIDLEEENNDNSSDEEKPQVDEDIDVKRMKRLEQLRARRPYHAISEDGSGWVSLSSNPENYIDSNNDISPPRKRKGADLSPGQQLKRNDTPSPD----YRTSDLQ--DISPPRRGRHD------SPPRRGHHDSPPRRGHHDSPPQDALHGSVASDLSPRRKILKNAARTGLRDISHGRSPKDFSPP--RRDQHDYET-------SDLQDISPPR--RSRHDSPS-QDVMRGSVAPDLSPPRKIQ-KNVARSGFSYSNRRSPQDLSPPR--HGRHDSPS----QDALHGSVVSDLSPPRKIQKNVGRLGSSDLSRHHSPSISVKVGSHPSLDPDLAPPRKNTKESSNPAS-----KTGLISGKDIRDEIDKKKSDDMLRFNKMDPSISGRGAEPVYRDKIKGVRISKEEYLKSKQKVEEKPKEIEIEWGKG-LAQKREAEARLKELELEKEKPFARTRDDPELDKMLKERLRWGDPMAHLVKKKYPEPVLPNLGENEKMKESGFVVPQDIPNHSWLKRGLDAASNRYGIRPGRHWDGVDRSNGFEKDMFKRTNERQARDREAYLWSVSDM 583
BLAST of g.arboreum_cottongen_reftransV1_0005846 vs. ExPASy TrEMBL
Match: M4EYH8_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=Bra033870 PE=4 SV=1) HSP 1 Score: 447.973 bits (1151), Expect = 1.731e-145 Identity = 308/580 (53.10%), Postives = 375/580 (64.66%), Query Frame = 1 Query: 214 SGVLVVDEDPVWQKPVN-LEEDEGNDSPDEKPLVDEDIEVKRMKRLEQIRLRRGYNAIAEDGSGWVSLSPKHANTVDP--NSDISPPRRQRTRNDTPSPEPGLRHSNSEIEAKDLSPPRKPR-----SP----------GLKSDLSPPRRSRAHNETTLTXXXXXXXXXXXXXXXXXXXXXXLKASRGGTDLSPPWKRRVRNGTPSPEPLVNRADGTDLSPPRKHRVRNDTPSPEPLVNRTDGT----DLSPPRKRRVRNDTPSPEPLANRAGADLSPPRKRRARNDTPSPKRR-VKPLREGADSDMSPPQQRSRRRHTQSPEPDMSPPRQSHAQTSELVHDSDLSPPRKSRRESTGPASLKQQSKTGLISGSDIREEISKTKKDDWLRFKEMDPSVSGRGAEPVFRDKTKGERISKEEYLXXXXXXXXXXXXXXXXXXXXXLAQKREAETRLQELELEKSKPFARTRDDPELDNMLKDRLRWGDPMAHLVKKKQPELVLKDLGDAERMKESGFVVPQDIPPHSWIVRKLDAAPNRYGIRPGRHWDGVDRSNGFEKKMFTKLNEKRATEREAYLWSVSDM 1884 +GVLVVDEDPVWQK V+ EED N S +E+P+VDEDIEVKRM+RLE+I+ RR NAIAEDGSGWVSLS DP + DISPPRR RTRND+PSPEPG S + D+SPPR+ + SP L SDL+PPR+ RA N++ +P PE ++ G DLSPPRK RV SPE R+D DLSPPR+++ S N+ DLSPPR+RR + +P P RR K L G++SD+SPP++ + ++ + D+SP R+ +++S D SPPR+ RRES P + K+Q KTGLISG DI E K K+D+ LRFK MD ++G+ AE VFRDK G+RISKEEYL+SK+K EKPKE +LEWG+GLAQKR+AE RLQELELEK KPFARTRDDPELD M+K+R+RWGDPMAHLVKKKQ E L DLGD E MK+SGFV+PQ IP HSWI R L+AAPNRYGI+PGRHWDGVDRS G EK F K +EK+ATE EAYLWSV+DM Sbjct: 37 TGVLVVDEDPVWQKQVDPHEEDNENYSAEERPVVDEDIEVKRMRRLEEIKARRAQNAIAEDGSGWVSLS------SDPQRSDDISPPRRHRTRNDSPSPEPG--GSRGSLPETDMSPPRRRKRHYTPSPEPNRLHAKPVSLDSDLTPPRKRRARNDSP---------------------------------------------SPEPEDPAPKSLGEDLSPPRKRRVH--PVSPERSRKRSDSLELDGDLSPPRRKK-----DSLVSDVNKRSNDLSPPRRRRYHSPSPEPGRRPSKSL--GSNSDLSPPRRSVSVKGSR--DSDLSPQRKPVSRSSNF----DSSPPRRPRRESPPPQTSKEQRKTGLISGKDIGSEYRKKKQDEQLRFKNMDSELTGQNAEAVFRDKITGKRISKEEYLQSKQKKVIEKPKEIKLEWGQGLAQKRDAEARLQELELEKDKPFARTRDDPELDQMMKERVRWGDPMAHLVKKKQYEAPLMDLGDNEEMKKSGFVIPQSIPKHSWITRGLEAAPNRYGIKPGRHWDGVDRSTGHEKDRFKKTSEKKATESEAYLWSVADM 548
BLAST of g.arboreum_cottongen_reftransV1_0005846 vs. ExPASy TrEMBL
Match: A0A0A0LTH5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G428990 PE=4 SV=1) HSP 1 Score: 441.81 bits (1135), Expect = 5.225e-143 Identity = 291/563 (51.69%), Postives = 361/563 (64.12%), Query Frame = 1 Query: 217 GVLVVDEDPVWQKPVNLEEDEGNDSPDEKPLVDEDIEVKRMKRLEQIRLRRGYNAIAEDGSGWVSLSPKHANTVDPNSDISPPRRQRTRNDTPSPEPGLRHSNSEIEAKDL---SPPRKPRSPGLKSDLSPPRRSRAHNETTLTXXXXXXXXXXXXXXXXXXXXXXLKASRGGTDLSPPWKRRVRNGTPSPEPLVNRADGT----DLSPPRKHRVRNDTPSPEPLVNRTDGTDLSPPRKRRVRNDTPSPEPLANRAGADLSPPRKRRARNDTPSPKRRVKPLREGADSDMSPPQQRSRRRHTQSPEPDMSPPRQSHAQTSELVHDSDLSPPRKSRRESTGPASLKQQSKTGLISGSDIREEISKTKKDDWLRFKEMDPSVSGRGAEPVFRDKTKGERISKEEYLXXXXXXXXXXXXXXXXXXXXXLAQKREAETRLQELELEKSKPFARTRDDPELDNMLKDRLRWGDPMAHLVKKKQPELVLKDLGDAERMKESGFVVPQDIPPHSWIVRKLDAAPNRYGIRPGRHWDGVDRSNGFEKKMFTKLNEKRATEREAYLWSVSDM 1884 GVLVVDEDPVWQKP+ +EED ++S DE+P VDED+EVKRM+RLE+++ +R YN+I+EDGSGWVSLSP AN+ NSD+SPPRR R RNDTPSP L+ E +D + L+ D P N T + + R G+ + ++ DLSPP +RR R TPSPEP D+SPPR R+D + + + DLSPPR+R +D E ++ G+DLSPPRK+R K +R D S ++SR +H + +DLSPPRK ++E S KQ KTGL++ + EE+SKT K+DW RFKEM+PS S A+PV+RDK KG+RISKEE+L R EEK KE +LEWGKGLAQKREAE L ELELEK +PFAR+R+D ELD ML+DRLRWGDPMAHLVKK+Q E+ L DLGD E+MKESGF++PQDIPPHSW+ R LDAAPNRYGIRPGRHWDGVDRSNGFEK+MF ++NEK+ATEREAYLWSVSDM Sbjct: 42 GVLVVDEDPVWQKPIIIEEDNADNSTDEEPQVDEDVEVKRMRRLEELKAKRPYNSISEDGSGWVSLSPNRANSSMVNSDMSPPRRTRVRNDTPSPSNELKPPVPGEEGEDFSPPRRRPRKPPSSLEHDEKPT------NSTYPSSSPTQKDKVYRDAHLQGANSWHIDYAQEDIDLSPPRQRRKRYHTPSPEPDATCTRSVSPQFDISPPR----RSDRKASKTSLGGNHKVDLSPPRRR--ASDYVGDERISR--GSDLSPPRKQR------------KDVR----GDRSLLDKQSR----------------NHVTDASQESPTDLSPPRKKQKELPVSVSFKQTRKTGLLTQQEFGEEMSKTNKEDWTRFKEMNPSASS-NADPVYRDKIKGDRISKEEFL-KARGKIEEKAKEIKLEWGKGLAQKREAEAELMELELEKDRPFARSRNDAELDTMLRDRLRWGDPMAHLVKKRQSEMALPDLGDNEKMKESGFMIPQDIPPHSWLKRGLDAAPNRYGIRPGRHWDGVDRSNGFEKQMFKRMNEKQATEREAYLWSVSDM 556
BLAST of g.arboreum_cottongen_reftransV1_0005846 vs. ExPASy TrEMBL
Match: M0U661_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1) HSP 1 Score: 423.705 bits (1088), Expect = 3.374e-136 Identity = 285/567 (50.26%), Postives = 361/567 (63.67%), Query Frame = 1 Query: 217 GVLVVDEDPVWQKPVNLEEDEGNDSPDEKPLVDEDIEVKRMKRLEQIRLRRGYNAIAEDGSGWVSLS--PKHANTVDPNSDISPPRRQRTRNDTPSPEPGLRHSNSEIEAKDLSPPRKPRSPGLKSDLSPPRRSRAHNETTLTXXXXXXXXXXXXXXXXXXXXXXLKASRGGTDLSPPWKRRVRNGTPSPEPLVNRADGTDLSPPRKHRVRNDTPSPEPLVNRTDGTDLSPPRKRRVRNDTPSPEPLANRAGADLSPPRKRRARNDTPSPKRRVKPL----REGADSDMSPPQQRSRRRHTQSPEPDMSPPRQSHAQTSELVHD-----SDLSPPRKSRRESTGPASLKQQSKTGLISGSDIREEISKTKKDDWLRFKEMDPSVSGRGAEPVFRDKTKGERISKEEYLXXXXXXXXXXXXXXXXXXXXXLAQKREAETRLQELELEKSKPFARTRDDPELDNMLKDRLRWGDPMAHLVKKKQPELVLKDLGDAERMKESGFVVPQDIPPHSWIVRKLDAAPNRYGIRPGRHWDGVDRSNGFEKKMFTKLNEKRATEREAYLWSVSDM 1884 G+LVVDEDPVWQKPV +E++E S DEKP ++EDIEVKRMKRL+ IR R+ Y+AI+EDGSGWVS+S K + + DI PPR+ R R DTPSPEP + S S+ SDLSPPR+ RA + + A G D+SPPW+R + +P + DLSPPR+ + ++ + P+ + D DLSPPR RR R +P D+S PR+ RR+ P R D+D+SPP R+ ++ D+SPPR+ H Q+ E + +DLSPPRKSR+E+ S K+ + GL S +I+EEI K KK+D RF MDP +SGRGAEPVFRDK +G+RISKEE L + +EKPKEK+LEWGKGLAQKREAE +ELELE+ KPFARTRDDPELD MLK+R+RWGDPMAH+VK+K +L+L+DLGD E+MKESGF++PQ IP HSW+ R +D PNRYG +PGRHWDGVDRSNGFEK++F + NEKRATEREAYLWSVSDM Sbjct: 47 GILVVDEDPVWQKPVQIEQEESEPSGDEKPQIEEDIEVKRMKRLDAIRARKPYHAISEDGSGWVSISDPSKTSKSAAIGRDICPPRQGRARFDTPSPEPKEKPSGSQ-----------------NSDLSPPRQRRADTPSP--------------------EPEKAVAGDGTADISPPWRRSRDDNSPPRRTRRAHSPVPDLSPPRRSQ-KDLSDDPKVSSRQQDPVDLSPPR-RRQRVSSP-----------DISLPRR----------TRRLSPGAGGPRASDDADLSPP-----RKSSKCLSDDLSPPRRIHPQSPEAIRRQSSPVADLSPPRKSRKEA---PSAKESRRAGLFSAKEIKEEIEKKKKEDTSRFASMDPFLSGRGAEPVFRDK-EGKRISKEEML---KTQEKEKPKEKKLEWGKGLAQKREAEANAKELELEREKPFARTRDDPELDKMLKERIRWGDPMAHVVKRKSSDLILEDLGDNEKMKESGFIIPQTIPSHSWLKRGIDFPPNRYGTKPGRHWDGVDRSNGFEKELFKRQNEKRATEREAYLWSVSDM 541
BLAST of g.arboreum_cottongen_reftransV1_0005846 vs. ExPASy TrEMBL
Match: J3MQV4_ORYBR (Uncharacterized protein OS=Oryza brachyantha GN=OB08G14830 PE=4 SV=1) HSP 1 Score: 423.705 bits (1088), Expect = 9.333e-136 Identity = 296/589 (50.25%), Postives = 366/589 (62.14%), Query Frame = 1 Query: 220 VLVVDEDPVWQKPVNLEEDEGNDSPDEKPLVDEDIEVKRMKRLEQIRLRRGYNAIAEDGSGWVSLSPKHANTVDPNS------------------DISPPRRQRTRNDTPSPEPGLRHSNSEIEAKDLSPPRKPR------SP-----GLKSDLSPPRRSRAHNETTLTXXXXXXXXXXXXXXXXXXXXXXLKASRGGTDLSPPWKRRVRNGTPSPEPLVNRADGTDLSPPRKHRVRNDTPSPEPLVNRTDGTDLSPPRKRRVRNDTPSPEPLANRAGADLSPPRKRRARNDTPSPKRRVKPLREG-ADS----DMSPPQQRSRRRHTQSPEPDMSPPRQSHAQTSELVHDSDLSPPRKSRRESTGPASLKQQSKTGLISGSDIREEISKTKKDDWLRFKEMDPSVSGRGAEPVFRDKTKGERISKEEYLXXXXXXXXXXXXXXXXXXXXXLAQKREAETRLQELELEKSKPFARTRDDPELDNMLKDRLRWGDPMAHLVKKKQPELVLKDLGDAERMKESGFVVPQDIPPHSWIVRKLDAAPNRYGIRPGRHWDGVDRSNGFEKKMFTKLNEKRATEREAYLWSVSDM 1884 VL+VDEDP WQKPV +EE E S DEKPLVDEDIEVKRM+RLE IR R YNAIAEDGSGWV+++ +PN D+SPPRR R R DTPSP+P + KDLSPPR+ R SP + DLSPPR+SR +++ R + S DLSPP +RR R+ + P+ DLSPPR+ RVR+D+ P+ DLSPPR RRVR+D+ P+ DLSPPR RR R+D+ PK P R DS D+SPP RR S EP PRQ + + D D+SPPRKS++E K + GL++ +++E+I K K+D+ L+F DPS+ G+GA+ VFRDK +G+RIS+E+ K+ + KPKE +EWGKGL QKREAE RL ELE EKSKPFARTRDDPELD MLK+R+RWGDPMAHLVK+ +L+L+DLGD E+MKESGF+VPQ+IP HSW+ R +D PNRYGI+PGRHWDGVDRSNGFEK MF NEK+ATE+EAYLWSVSDM Sbjct: 53 VLIVDEDPTWQKPVQIEE-EPPSSGDEKPLVDEDIEVKRMRRLEAIRAARPYNAIAEDGSGWVTVAAPEEPNEEPNGCRRRNDTPSPERGGAGRKDLSPPRR-RQRQDTPSPDP------RDAVGKDLSPPRQRRKRQDTPSPKGNEIAAQDDLSPPRKSRQQQDSSPPRRLARHD------------------SEDPQDLSPP-RRRTRHDSEEPQ---------DLSPPRR-RVRHDSEEPK---------DLSPPR-RRVRHDSEEPK--------DLSPPR-RRTRHDSEEPKDLSPPRRRTRHDSEEPKDLSPP---CRRMRHGSHEPKDKLPRQKRQSLDKSLDDGDISPPRKSKKE----VPPKDVRRAGLMTAEEVKEDIRKIKEDERLKFAAQDPSMIGKGAKAVFRDK-QGKRISEEDM---KKAKEDTKPKEIHIEWGKGLVQKREAEARLHELEAEKSKPFARTRDDPELDTMLKNRIRWGDPMAHLVKRNDTDLLLEDLGDNEKMKESGFIVPQNIPSHSWLKRGVDPPPNRYGIKPGRHWDGVDRSNGFEKDMFKLKNEKQATEQEAYLWSVSDM 574
BLAST of g.arboreum_cottongen_reftransV1_0005846 vs. ExPASy Swiss-Prot
Match: BUD13_HUMAN (BUD13 homolog OS=Homo sapiens GN=BUD13 PE=1 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.486e-37 Identity = 177/541 (32.72%), Postives = 250/541 (46.21%), Query Frame = 1 Query: 451 DISPPRRQRTRNDTPSPEP--GLRHSNSEIEAKDLSPPRKPRSPGLKSDLSPPRRSRAHNETTLTXXXXXXXXXXXXXXXXXXXXXXLKASRGGTDLSPPWKRRVRNGTPSPEP-LVNRADGTDLSPPRKHRVRNDTPSPEPLVNRTDGTDLSPPRKRRVRNDTP-----------------SPE-------PLANRAGA---------------DLSPPRKRRARN--------------------DTPSPKRRVKPLREGADSDMSPPQQRSRRRHTQSPEPDMSPPRQSHAQTSELVHDSDLSPPRKSRRESTGPASLKQQSKTGLISGSDIREEISKTKKDDWLRFKEMDPSVSGRGAEPVFRDKTKGERISKEEYLXXXXXXXXXXXXXXXXXX-XXXLAQKREAETRLQELELEKSKPFARTRDDPELDNMLKDRLRWGDPMAHLVKKKQPELVLKDLGDAERMKESGFVVPQDIPPHSWIVRKLDAAPNRYGIRPGRHWDGVDRSNGFEKKMFTKLNEKRATEREAYLWSVSDM 1884 D P +R R+DTP P P G RH + D SPPR+ R SD SPPRR+R + + + SP RRVR+ +P P P R +D+S PR RV N++P RT G+ + + RR R+D+P +PE P +GA D+SPPRK++A++ D SP+ + P + +DSD+SPP+ R R R + S D+SPPR+ S DSDLSPPR+S+ A + +KTGL+ +DI+ E + K+ D + M + AE VFRDK+ +R K E L+ +RK ++ +++ GKGLAQ R+ + +++ E KP AR DD +LD ML+++ R GDPMA+ +KK + + R + SG P PNR+ I PG WDGVDRSNGFE+K F +L K+A E AY WSV DM Sbjct: 146 DTPDPSPRRARHDTPDPSPLRGARHDS------DTSPPRRIRHDS--SDTSPPRRARHDSPDPSPPR---------------------RPQHNSSGASP---RRVRHDSPDPSPPRRARHGSSDISSPR--RVHNNSPD---TSRRTLGSSDTQ-QLRRARHDSPDLAPNVTYSLPRTKSGKAPERASSKTSPHWKESGASHLSFPKNSKYEYDPDISPPRKKQAKSHFGDKKQLDSKGDCQKATDSDLSSPRHKQSPGHQDSDSDLSPPRNRPRHRSSDS---DLSPPRRRQRTKSS---DSDLSPPRRSQPPGKKAAHMYSGAKTGLVL-TDIQREQQELKEQDQ---ETMAFEAEFQYAETVFRDKSGRKRNLKLERLEQRRKAEKDSERDELYAQWGKGLAQSRQQQQNVEDAMKEMQKPLARYIDDEDLDRMLREQEREGDPMANFIKKNKAKENKNK---KVRPRYSGPAPP----------------PNRFNIWPGYRWDGVDRSNGFEQKRFARLASKKAVEELAYKWSVEDM 619
BLAST of g.arboreum_cottongen_reftransV1_0005846 vs. ExPASy Swiss-Prot
Match: BUD13_CAEEL (BUD13 homolog OS=Caenorhabditis elegans GN=R08D7.1 PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 2.132e-35 Identity = 144/388 (37.11%), Postives = 201/388 (51.80%), Query Frame = 1 Query: 778 PEPLVNRADGTDLSPPRKHRVRNDTPS--PEPLVNRTDGTDLSPPRKRRVRNDTP---SPEPLANRAGADLSPPR-KRRARNDTPSPKRRVKP---LREGADSDMSPPQQRSRRRHTQSPEPDMSPPRQSHAQTSELVHDSDLSPPRKSRR--------------ESTGPASLKQQSKTGLISGSDIREEISKTKKDDWLRFKEMDPSVSGRGAEPVFRDKT---KGERISKEEYLXXXXXXXXXXXXXXXXXXXXXLAQKREAETRLQELELEKSKPFARTRDDPELDNMLKDRLRWGDPMAHLVKKKQPELVLKDLGDAERMKESGFVVPQDIPPHSWIVRKLDAAPNRYGIRPGRHWDGVDRSNGFEKKMFTKLNEKRATEREAY 1863 PEPL D SPPR R R+D+ + P P R D +D SPPR R R+D+ SP P R +D SPPR R+ R ++PS + R P R+ DSD SPP+ RSRR + D SPPR+ + + D DLSPPRKSR+ ++ + ++GL S D++EE K + + F+EMD SVSGR A+ V+R K KG+ +++ K + E+ KEK W KG+AQ + +L+E+ ++P AR RDD ++ LK+ L DPMA++++KK+ + + D G+ V P H V PNR+GI PG WDGVDRSNGFE K+ N K A + E Y Sbjct: 95 PEPL-----SPDNSPPRGKRQRHDSDNSPPRPSRKRND-SDNSPPRPSRNRHDSDKDNSP-PRRRRHDSDNSPPRPSRKIREESPSARNRRSPPRTRRDRHDSDNSPPRNRSRR------DSDNSPPRRRPSSPARRRKDDDLSPPRKSRKIEEPKKIKKEEPDSDTETSGRTLEGKRSGLQSARDLKEESDKLRAKNSKMFEEMDTSVSGRFADTVYRQKQTKKKGKDSEEDQAKKERETKKTEELKEKYKSWNKGVAQIEDRRAQLEEMARVAAEPMARARDDDAMNAHLKEVLHAADPMANMIQKKRRDTAI-DRGE--------LVYPS---YHGHFV------PNRFGIAPGYRWDGVDRSNGFEGKLAKTENTKTANQSEYY 451
BLAST of g.arboreum_cottongen_reftransV1_0005846 vs. ExPASy Swiss-Prot
Match: BUD13_MOUSE (BUD13 homolog OS=Mus musculus GN=Bud13 PE=1 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 9.020e-35 Identity = 125/339 (36.87%), Postives = 179/339 (52.80%), Query Frame = 1 Query: 889 TDLSPPRKRRVRNDTPSPEPLANR------AGADLSPPRKRRARNDTPSPKRRVKPLREGADSDMSPPQQRSRRRHTQSPEPDMSPPRQSHAQTSELVHDSDLSPPRKSRRESTGPASLKQQSKTGLISGSDIREEISKTKKDDWLRFKEMDPSVSGRGAEPVFRDKTKGERISKEEYLXXXXXXXXXXXXXXXXXX-XXXLAQKREAETRLQELELEKSKPFARTRDDPELDNMLKDRLRWGDPMAHLVKKKQPELVLKDLGDAERMKESGFVVPQDIPPHSWIVRKLDAAPNRYGIRPGRHWDGVDRSNGFEKKMFTKLNEKRATEREAYLWSVSDM 1884 +DLSPPRKR+ + + + L ++ + +DLSPPRK++ + +DSD+SPP+ R RR QS + D+SPPR+ S DSDLSPPR+S R A + +KTGL++ D++ E + KK D D E VFRDK+ +R K E L+ +RK ++ +++ GKGLAQ R+ + +++ E KP AR DD +LD ML+++ R GDPMA+ +KK + + + + SG P PNR+ I PG WDGVDRSNGFE+K F +L K+A E AY WSV DM Sbjct: 341 SDLSPPRKRQAKAHFEAKKQLDSKGVYQKASDSDLSPPRKKKNSG------------HQDSDSDLSPPRNRPRR---QSSDSDLSPPRRRQRTKSS---DSDLSPPRRSPRPGKKTAHMYSGAKTGLVT--DVQREHQELKKQDQ---DTTDLGAQFEFTETVFRDKSGRKRNLKLERLEQRRKAEKDSERDELYAQWGKGLAQSRQQQQNVEDAMKEMQKPLARYIDDEDLDRMLREQEREGDPMANFIKKNKAKENKNK---KVKPRYSGPAPP----------------PNRFNIWPGYRWDGVDRSNGFEQKRFARLASKKAVEELAYKWSVEDM 637 HSP 2 Score: 67.3958 bits (163), Expect = 2.731e-10 Identity = 126/399 (31.58%), Postives = 155/399 (38.85%), Query Frame = 1 Query: 220 VLVVDEDPVWQ-----KPVNLEEDEGNDSPDEKPLVDED-IEVKRMKRLEQIRLRRGYNAIAEDGSGWVSLSPKHANTVDPNSDISPPRRQRTRNDTPSPEPGLRHSNSEIEAKDLSPPRKPRSPGLKSDLSPPRRSRAHNETTLTXXXXXXXXXXXXXXXXXXXXXXLKASRGGTDLSPPWKRRVRNGTPSPEPLVN-RADGTDLSPPRKHRVRNDTPSPEPLVNRTDGTDLSPPRKRRVRNDTPSPEPLAN-RAGADLSPPRKRRARNDTPSPKRRVKPLREGADSDMSPPQ--------------------QRSRRRHTQSPEPDMSPPRQSHAQ----------------------TSELVHDSDLSPPRKSRRESTGPASLKQQSKTGLISGSD 1266 + +VD+D W KP EE++G D P VDE EVK+M+ + EDG H + D D SPPRR R+DTP D SPPRK R D SPPR++R T P KA D SPP R+ R+ TP P P R D DLSPPR RVR+DTP DLSPPR RVR+DTP P P R D SPPRK + SP+R G+ SP Q Q RR H +SP+ ++ + S A S+ HDSDLSPPRK + ++ A + SK SD Sbjct: 49 MRIVDDDVGWAAISTAKPEKEEEEDG-DLPVVAEFVDERPEEVKQMEAFRSSAKWKLLGGHGEDG---------HFHHDD--QDSSPPRR--VRHDTP----------------DTSPPRKARHD--TPDPSPPRKARHDTPDT---------------------SPPRKARHDTPDPSPP--RKARHDTPDPSPPRRVRHDTPDLSPPR--RVRHDTP------------DLSPPR--RVRHDTPDPSPPRRVRHDLDASPPRKSHRNSSAVSPRR----GHHGSLGTSSPRQTHNHSPTAAQHRRTLDSSGTQHLRRAHHESPDLELHKAKSSKAAERAPSKAASQSGLGPSHPSLSTNSKYEHDSDLSPPRKRQAKAHFEAKKQLDSKGVYQKASD 372
BLAST of g.arboreum_cottongen_reftransV1_0005846 vs. ExPASy Swiss-Prot
Match: BUD13_CHICK (BUD13 homolog OS=Gallus gallus GN=BUD13 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 6.567e-32 Identity = 181/593 (30.52%), Postives = 277/593 (46.71%), Query Frame = 1 Query: 214 SGVLVVDEDPVWQKPVNLEEDEGNDSPDEKPLVDEDIEVKRMKRLEQIRLRRGYNAIAEDGSGWVSLSPKHANTVDPNSDISPPRRQRTR---NDTP--SPEPGLRHSNSEIEAKDLSPPRKPRSPGLKSDLSPPRRSRAHNETTLTXXXXXXXXXXXXXXXXXXXXXXLKASRGGTDLSPPWKRRVRNGTPSPEPLVNRADGTDLSPPRKHRVRNDTP--SPEPLVNRTDGTDLSPPRKRRVRNDTPSPEPLANRAGADLSPPRKRRARND---TPSPKRR-----------------VKPLREGADSDMSPPQQRSRRRHTQ-SPEPDMSPPRQSH-AQTSELVHDSDLSPPRKSRRE------STGPASLKQQSKTGLISGSDIREEISKTKKDDWLRFKEMDPSVSGRGAEPVFRDKTKGERISKEEYLXXXXXXXXXXXXXXXXXX-XXXLAQKREAETRLQELELEKSKPFARTRDDPELDNMLKDRLRWGDPMAHLVKKKQPELVLKDLGDAERMKESGFVVPQDIPPHSWIVRKLDAAPNRYGIRPGRHWDGVDRSNGFEKKMFTKLNEKRATEREAYLWSVSDM 1884 +G+ +VD+D W + E E + + P+V E I+ +R ++++L + S W L + ++ P+SD+S P + TR +D+P SP +RH ++ DLSPPR+ R+ S PR+ R H L+ + DLSPP ++R + P R D DLSPPR R R+D+P SP P R D D SPPRK+R +D+P P + DLS RK+R +D +PS ++R VK LR DSD PP RR TQ + E D+SP ++H A S SPP SR S ++ + GL+S +R E + +K + K ++ R E +FRDK+ +R +E L+ ++K + ++++ G+GLAQ R+ + +++ E KP AR DD +LD ML+++ R GDPMA ++K++ + + + SG P NR+ I PG WDGVDRSNGFE++ F ++ K+A + AY WS+ DM Sbjct: 39 AGMRIVDDDVGWSSIAAVPEKEEEEDEGDMPVVAEFID----ERPDEVKLMEEFRT----NSKWKLLGDRDEDS--PSSDVSVPAKATTRQQRHDSPDNSPPRRVRH-----DSPDLSPPRQERN---NSASLLPRKERQHGSPDLSPPR--------------------RKRHDSPDLSPPRRKRHDDSPDLSPPRRKRHDSPDLSPPR--RKRHDSPDLSP-PRRQRHDSPDPSPPRKKR--HDSPDLSPQEQQTTPDLSLQRKKRYDSDPDSSPSLRKRARSPGHKKPSRTKDASPVKKLRR--DSDSPPP-----RRGTQNASEADLSPQGKNHRALPSGKGQHGSKSPPDLSRHHYPDDKGSPKKGNMMSGVRAGLVSADVLRREQQELRKQE-RSSKHLE--EESRHTETIFRDKSGRKRDLVQERLEQQQKDEAKSERDEQYARWGRGLAQGRQQQQNVEDAIKEMQKPLARYIDDEDLDRMLREQEREGDPMAEFIRKRKAKESKEKKEKP---RYSGPAPPL----------------NRFNIWPGHRWDGVDRSNGFEQQFFARMANKKAVQELAYKWSIEDM 559
BLAST of g.arboreum_cottongen_reftransV1_0005846 vs. ExPASy Swiss-Prot
Match: BUD13_RAT (BUD13 homolog OS=Rattus norvegicus GN=Bud13 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 2.210e-29 Identity = 194/655 (29.62%), Postives = 280/655 (42.75%), Query Frame = 1 Query: 220 VLVVDEDPVWQKPVNLEEDEGNDSPDEKPLVDEDI-----EVKRMKRLEQIRLRRGYNAIAEDGSGWVSLSPKHANTVDPNS---------DISPPRRQRTRNDTPSPEPGLRHSNSEIEAKDLSPPRKPR--SPGLKSDLSPPRRSRAHNETTLTXXXXXXXXXXXXXXXXXXXXXXLKASRGGTDLSPPWKRRVRNGTPSPEPLVN-RADGTDLSPPRKHRVRNDTPSPEPLVNRTDGTDLSPPRKRRVRNDTPSPEPLANRAGADLSPPR---------KRRARNDTPS---PKRRVKPLRE-------------------------GADSDMSPPQQRSRRRH-------------TQSPEPDMSPPRQSHAQTSELVHDSDLSPPR-KSRREST-------------------------GPASLKQQ------SKTGLISGSDIREEISKTKKDDWLRFKEMDPSVSGRGAEPVFRDKTKGERISKEEYLXXXXXXXXXXXXXXXXXX-XXXLAQKREAETRLQELELEKSKPFARTRDDPELDNMLKDRLRWGDPMAHLVKKKQPELVLKDLGDAERMKESGFVVPQDIPPHSWIVRKLDAAPNRYGIRPGRHWDGVDRSNGFEKKMFTKLNEKRATEREAYLWSVSDM 1884 + +VD+D W + ++ + + P+V E + EVK+M+ + +EDG H + DP+ D SPPRR R PSP +RH + D SPPR+ R SP D SP RR + + TR + D SPP RRVR+ TP P P R D D SPPR RVR+D+ + P + + + +SP R + T SP N + A R RRAR+D+P PK + E DSD+SPP++R + H ++ + D+SPPR++ +++ DSDLSPPR + RR+S+ P S K+ +KTGL+ +D++ E + KK D D E VFRDK+ +R K E L+ +RK ++ +++ GKGLAQ R+ + +++ E KP AR DD +LD ML+++ R GDPMA+ +KK + + R + +G P PNR+ I PG WDGVDRSNGFE+K F +L K+A E AY WSV DM Sbjct: 49 MRIVDDDVGWAAISTDKLEKEEEEDGDLPVVAEFVDERPEEVKQMEAFRSSTKWKLLGGYSEDGHF-------HNDDQDPSPPRKARHDTPDASPPRRVRHGTPEPSPPRRVRH-----DTPDPSPPRRVRHDSP----DPSPTRRGHDSPDPSPTR----------------------RVHHDSPDPSPP--RRVRHDTPDPSPPRRVRHDTPDPSPPR--RVRHDSDASPPRRSHRNSSAVSPKRGHHGSSGTSSPRQAHNHSPAAAQHRRTLDSSGAQHHRRARHDSPDLELPKAKSSKAAERPSSKTVSQSGLGPPHPSLSMNSKYEHDSDLSPPRKRQAKAHFGAKKQLDSKGVCQKASDSDLSPPRKN-SKSGHQDSDSDLSPPRNRPRRQSSDSDLSPPRRRQRTKSSDSDLSPSRRSPRSGKKTPHMYSGAKTGLV--ADVQREHQELKKQDQ---DATDLGAQFEFTETVFRDKSGRKRNLKLERLEQRRKAEKDSERDELYAQWGKGLAQSRQQQQNVEDAMKEMQKPLARYIDDEDLDRMLREQEREGDPMANFIKKNKAKENKN---KKVRPRYNGPAPP----------------PNRFNIWPGYRWDGVDRSNGFEQKRFARLASKKAVEELAYKWSVEDM 636
BLAST of g.arboreum_cottongen_reftransV1_0005846 vs. ExPASy Swiss-Prot
Match: CWC26_SCHPO (Pre-mRNA-splicing factor cwf26 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cwf26 PE=1 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 2.429e-19 Identity = 50/128 (39.06%), Postives = 66/128 (51.56%), Query Frame = 1 Query: 1501 LQELELEKSKPFARTRDDPELDNMLKDRLRWGDPMAHLVKKKQPELVLKDLGDAERMKESGFVVPQDIPPHSWIVRKLDAAPNRYGIRPGRHWDGVDRSNGFEKKMFTKLNEKRATEREAYLWSVSDM 1884 L+ELE +K+ P AR DDPE + LK+R RW DP A + K P S + A PNR+ IRPG WDG+ R NGFE K F + NE++A E EA++W++ DM Sbjct: 205 LKELERQKTVPLARYEDDPEYNKELKERSRWNDPAASFLTNK--------------------------PVSSKATYQGYAPPNRFNIRPGHRWDGIIRGNGFENKWFQRQNERKAQEHEAHMWAIEDM 306
BLAST of g.arboreum_cottongen_reftransV1_0005846 vs. ExPASy Swiss-Prot
Match: CWC26_EMENI (Pre-mRNA-splicing factor cwc26 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=cwc26 PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.075e-15 Identity = 51/133 (38.35%), Postives = 62/133 (46.62%), Query Frame = 1 Query: 1477 QKREAETRLQELELEKSKPFARTRDDPELDNMLKDRLRWGDPMAHLVKKKQPELVLKDLGDAERMKESGFVVPQDIPPHSWIVRKLDAAPNRYGIRPGRHWDGVDRSNGFEKKMFTKLNEKRATEREAYLWSV 1875 Q+ E E+R LE K P ART DD EL+ LK + RW DP A + K G P + + PNRYGIRPG WDGVDRSNGFEK+ F N+K + Y W + Sbjct: 232 QRAERESRRAALEEAKVMPLARTADDEELNEELKAQTRWNDPAAQFLTKST----------------GGGRSKTGKPLYKGAFQ-----PNRYGIRPGHRWDGVDRSNGFEKEWFAARNKKERMQALEYEWQM 343
BLAST of g.arboreum_cottongen_reftransV1_0005846 vs. ExPASy Swiss-Prot
Match: CWC26_MAGO7 (Pre-mRNA-splicing factor CWC26 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=CWC26 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.735e-14 Identity = 51/133 (38.35%), Postives = 67/133 (50.38%), Query Frame = 1 Query: 1477 QKREAETRLQELELEKSKPFARTRDDPELDNMLKDRLRWGDPMAHLVKKKQPELVLKDLGDAERMKESGFVVPQDIPPHSWIVRKLDAAPNRYGIRPGRHWDGVDRSNGFEKKMFTKLNEKRATEREAYLWSV 1875 Q EA R ++LE P AR +DD E++N +K RW DPM + + D +A ++G + P V K AAPNRYGIRPG WDGVDR GFE + F LN + T+ Y W + Sbjct: 230 QIEEARRRREKLEDAALMPLARGKDDEEMNNAMKSEQRWNDPMMQFMSEN-------DKREAGGTAKTGGRRVKGRP-----VYKGPAAPNRYGIRPGYRWDGVDRGIGFEAERFKALNRRERTKDLEYNWQM 350
BLAST of g.arboreum_cottongen_reftransV1_0005846 vs. ExPASy Swiss-Prot
Match: CWC26_ASPFU (Pre-mRNA-splicing factor cwc26 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=cwc26 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 2.859e-14 Identity = 49/134 (36.57%), Postives = 66/134 (49.25%), Query Frame = 1 Query: 1477 QKREAETRLQELELEKSKPFARTRDDPELDNMLKDRLRWGDPMA-HLVKKKQPELVLKDLGDAERMKESGFVVPQDIPPHSWIVRKLDAAPNRYGIRPGRHWDGVDRSNGFEKKMFTKLNEKRATEREAYLWSV 1875 Q+ E E R Q+++ ++ P ART +D L+ LK + RW DP A L K K P + + + + + F PNRYGIRPG WDGVDR NGFEK+ F N+K E Y W + Sbjct: 231 QRAEREARRQQIQEARAMPLARTIEDDALNEELKAQQRWNDPAAGFLTKTKGPGVSVT----GKPLYKGAF------------------QPNRYGIRPGHRWDGVDRGNGFEKEWFAARNKKGRLEALDYQWQM 342
BLAST of g.arboreum_cottongen_reftransV1_0005846 vs. ExPASy Swiss-Prot
Match: CWC26_NEUCR (Pre-mRNA-splicing factor cwc-26 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=cwc-26 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.077e-14 Identity = 45/118 (38.14%), Postives = 62/118 (52.54%), Query Frame = 1 Query: 1522 KSKPFARTRDDPELDNMLKDRLRWGDPMAHLVKKKQPELVLKDLGDAERMKESGFVVPQDIPPHSWIVRKLDAAPNRYGIRPGRHWDGVDRSNGFEKKMFTKLNEKRATEREAYLWSV 1875 K P AR++DD +L+ LK + RW DPMA + ++ ++ + G A R P + K A PNRYGI+PG WDGVDRSNGFE + F LN + + Y W + Sbjct: 274 KLMPLARSKDDEQLNAELKQQDRWNDPMAQFLAPEEVKVKGRKKGTAGRR-----------PTY-----KGPAPPNRYGIKPGYRWDGVDRSNGFEAERFKALNRRERNKGLEYAWQM 375 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0005846 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0005846 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 13
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0005846 ID=g.arboreum_cottongen_reftransV1_0005846; Name=g.arboreum_cottongen_reftransV1_0005846; organism=Gossypium arboreum; type=contig; length=2091bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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