g.arboreum_cottongen_reftransV1_0005846, g.arboreum_cottongen_reftransV1_0005846 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0005846 vs. ExPASy TrEMBL
Match: A0A0B0PFF8_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_28931 PE=4 SV=1) HSP 1 Score: 1010.75 bits (2612), Expect = 0.000e+0 Identity = 592/592 (100.00%), Postives = 592/592 (100.00%), Query Frame = 1 Query: 109 MASSLKEYLXXXXXXXXXXXXXXXXXXXXXXXXXSSGVLVVDEDPVWQKPVNLEEDEGNDSPDEKPLVDEDIEVKRMKRLEQIRLRRGYNAIAEDGSGWVSLSPKHANTVDPNSDISPPRRQRTRNDTPSPEPGLRHSNSEIEAKDLSPPRKPRSPGLKSDLSPPRRSRAHNETTLTXXXXXXXXXXXXXXXXXXXXXXLKASRGGTDLSPPWKRRVRNGTPSPEPLVNRADGTDLSPPRKHRVRNDTPSPEPLVNRTDGTDLSPPRKRRVRNDTPSPEPLANRAGADLSPPRKRRARNDTPSPKRRVKPLREGADSDMSPPQQRSRRRHTQSPEPDMSPPRQSHAQTSELVHDSDLSPPRKSRRESTGPASLKQQSKTGLISGSDIREEISKTKKDDWLRFKEMDPSVSGRGAEPVFRDKTKGERISKEEYLXXXXXXXXXXXXXXXXXXXXXLAQKREAETRLQELELEKSKPFARTRDDPELDNMLKDRLRWGDPMAHLVKKKQPELVLKDLGDAERMKESGFVVPQDIPPHSWIVRKLDAAPNRYGIRPGRHWDGVDRSNGFEKKMFTKLNEKRATEREAYLWSVSDM 1884 MASSLKEYLKRYETKNEEEEQKKKRKKKKKTKPESSGVLVVDEDPVWQKPVNLEEDEGNDSPDEKPLVDEDIEVKRMKRLEQIRLRRGYNAIAEDGSGWVSLSPKHANTVDPNSDISPPRRQRTRNDTPSPEPGLRHSNSEIEAKDLSPPRKPRSPGLKSDLSPPRRSRAHNETTLTREDSDLSPPSRRPARAGSPEPRLKASRGGTDLSPPWKRRVRNGTPSPEPLVNRADGTDLSPPRKHRVRNDTPSPEPLVNRTDGTDLSPPRKRRVRNDTPSPEPLANRAGADLSPPRKRRARNDTPSPKRRVKPLREGADSDMSPPQQRSRRRHTQSPEPDMSPPRQSHAQTSELVHDSDLSPPRKSRRESTGPASLKQQSKTGLISGSDIREEISKTKKDDWLRFKEMDPSVSGRGAEPVFRDKTKGERISKEEYLKSKRKGGEEKPKEKELEWGKGLAQKREAETRLQELELEKSKPFARTRDDPELDNMLKDRLRWGDPMAHLVKKKQPELVLKDLGDAERMKESGFVVPQDIPPHSWIVRKLDAAPNRYGIRPGRHWDGVDRSNGFEKKMFTKLNEKRATEREAYLWSVSDM Sbjct: 1 MASSLKEYLKRYETKNEEEEQKKKRKKKKKTKPESSGVLVVDEDPVWQKPVNLEEDEGNDSPDEKPLVDEDIEVKRMKRLEQIRLRRGYNAIAEDGSGWVSLSPKHANTVDPNSDISPPRRQRTRNDTPSPEPGLRHSNSEIEAKDLSPPRKPRSPGLKSDLSPPRRSRAHNETTLTREDSDLSPPSRRPARAGSPEPRLKASRGGTDLSPPWKRRVRNGTPSPEPLVNRADGTDLSPPRKHRVRNDTPSPEPLVNRTDGTDLSPPRKRRVRNDTPSPEPLANRAGADLSPPRKRRARNDTPSPKRRVKPLREGADSDMSPPQQRSRRRHTQSPEPDMSPPRQSHAQTSELVHDSDLSPPRKSRRESTGPASLKQQSKTGLISGSDIREEISKTKKDDWLRFKEMDPSVSGRGAEPVFRDKTKGERISKEEYLKSKRKGGEEKPKEKELEWGKGLAQKREAETRLQELELEKSKPFARTRDDPELDNMLKDRLRWGDPMAHLVKKKQPELVLKDLGDAERMKESGFVVPQDIPPHSWIVRKLDAAPNRYGIRPGRHWDGVDRSNGFEKKMFTKLNEKRATEREAYLWSVSDM 592
BLAST of g.arboreum_cottongen_reftransV1_0005846 vs. ExPASy TrEMBL
Match: A0A0D2PGJ9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G293700 PE=4 SV=1) HSP 1 Score: 956.436 bits (2471), Expect = 0.000e+0 Identity = 573/592 (96.79%), Postives = 580/592 (97.97%), Query Frame = 1 Query: 109 MASSLKEYLXXXXXXXXXXXXXXXXXXXXXXXXXSSGVLVVDEDPVWQKPVNLEEDEGNDSPDEKPLVDEDIEVKRMKRLEQIRLRRGYNAIAEDGSGWVSLSPKHANTVDPNSDISPPRRQRTRNDTPSPEPGLRHSNSEIEAKDLSPPRKPRSPGLKSDLSPPRRSRAHNETTLTXXXXXXXXXXXXXXXXXXXXXXLKASRGGTDLSPPWKRRVRNGTPSPEPLVNRADGTDLSPPRKHRVRNDTPSPEPLVNRTDGTDLSPPRKRRVRNDTPSPEPLANRAGADLSPPRKRRARNDTPSPKRRVKPLREGADSDMSPPQQRSRRRHTQSPEPDMSPPRQSHAQTSELVHDSDLSPPRKSRRESTGPASLKQQSKTGLISGSDIREEISKTKKDDWLRFKEMDPSVSGRGAEPVFRDKTKGERISKEEYLXXXXXXXXXXXXXXXXXXXXXLAQKREAETRLQELELEKSKPFARTRDDPELDNMLKDRLRWGDPMAHLVKKKQPELVLKDLGDAERMKESGFVVPQDIPPHSWIVRKLDAAPNRYGIRPGRHWDGVDRSNGFEKKMFTKLNEKRATEREAYLWSVSDM 1884 MASSLKEYLKRYETKNEEEEQKKKRKKKKKTKPESSGVLVVDEDPVWQKPVNLEEDEGNDSPDEKPLVDEDIEVKRMKRLEQIRLRRGYNAIAEDGSGWVSLSPKHAN VDPNSDISPPRRQRTRNDTPSPEPGLRHSNSEIEAKDLSPPRKPRSPGLKSDLSPPRRSRAHNETTLTREDSDLSPP R+PARA SPEPRLKASRGG+DLSPP KRRVRN TPSPE LVNRADGTDLSPPRK RVRNDTPSPEPLVNRTDGTDLSPPRKRRVRNDTPSPEPLANRAGA LSPPRKRRARNDTPSPKRRVKPLREGADSDMSPP+QRSRR+ QSPEPDM PPRQSHAQTSELVHDSDLSPPRKSRRESTGPASLKQQ KTGLISGSDIREEISKTKKDDWLRFKEMDPSVSGRGAEPVFRDKTKGERISKEEYLKSKRKGGEEKPKEKELEWGKGLAQKREAETRLQ+LELEKSKPFARTRDDPELDNMLKDRLRWGDPMAHLVKKKQPELVLKDLGDAE+MKESGF+VPQDIPPHSWIVRKLDAAPNRYGIRPGRHWDGVDRSNGFEKKMFTKLNEKRATEREAYLWSVSDM Sbjct: 1 MASSLKEYLKRYETKNEEEEQKKKRKKKKKTKPESSGVLVVDEDPVWQKPVNLEEDEGNDSPDEKPLVDEDIEVKRMKRLEQIRLRRGYNAIAEDGSGWVSLSPKHANMVDPNSDISPPRRQRTRNDTPSPEPGLRHSNSEIEAKDLSPPRKPRSPGLKSDLSPPRRSRAHNETTLTREDSDLSPPCRKPARADSPEPRLKASRGGSDLSPPRKRRVRNDTPSPEALVNRADGTDLSPPRKRRVRNDTPSPEPLVNRTDGTDLSPPRKRRVRNDTPSPEPLANRAGAGLSPPRKRRARNDTPSPKRRVKPLREGADSDMSPPRQRSRRQRAQSPEPDMPPPRQSHAQTSELVHDSDLSPPRKSRRESTGPASLKQQPKTGLISGSDIREEISKTKKDDWLRFKEMDPSVSGRGAEPVFRDKTKGERISKEEYLKSKRKGGEEKPKEKELEWGKGLAQKREAETRLQDLELEKSKPFARTRDDPELDNMLKDRLRWGDPMAHLVKKKQPELVLKDLGDAEKMKESGFIVPQDIPPHSWIVRKLDAAPNRYGIRPGRHWDGVDRSNGFEKKMFTKLNEKRATEREAYLWSVSDM 592
BLAST of g.arboreum_cottongen_reftransV1_0005846 vs. ExPASy TrEMBL
Match: A0A061F1U0_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_026519 PE=4 SV=1) HSP 1 Score: 687.567 bits (1773), Expect = 0.000e+0 Identity = 409/560 (73.04%), Postives = 449/560 (80.18%), Query Frame = 1 Query: 211 SSGVLVVDEDPVWQKPVNLEED-EGNDSPDEKPLVDEDIEVKRMKRLEQIRLRRGYNAIAEDGSGWVSLSPKHANTVDPNSDISPPRRQRTRNDTPSPEPGLRHSNSEIEAKDLSPPRKPRSPGLKSDLSPPRRSRAHNETTLTXXXXXXXXXXXXXXXXXXXXXXLKASRGGTDLSPPWKRRVRNGTPSPEPLVNRADGTDLSPPRKHRVRNDTPSPEPLVNRT-DGTDLSPPRKRRVRNDTPSPEPLANRAGADLSPPRKRRARNDTPSPKRRVKPLREGADSDMSPPQQRSRRRHTQSPEPDMSPPRQSHAQTSELVHDSDLSPPRKSRRESTGPASLKQQSKTGLISGSDIREEISKTKKDDWLRFKEMDPSVSGRGAEPVFRDKTKGERISKEEYLXXXXXXXXXXXXXXXXXXXXXLAQKREAETRLQELELEKSKPFARTRDDPELDNMLKDRLRWGDPMAHLVKKKQPELVLKDLGDAERMKESGFVVPQDIPPHSWIVRKLDAAPNRYGIRPGRHWDGVDRSNGFEKKMFTKLNEKRATEREAYLWSVSDM 1884 SSGV VVDEDPVWQKPVNLEED +GNDSPDEKPLVDEDIEVKRMK+LEQIRL RG N+IAEDGSGWVSLSPK NT+DPNSD+SPPRRQR RNDTPSPEPGLRHSNSE E +DLSP R+PRSPGLKSDLSPPRRSR N+T RED+DLSPP RRP+R PEP +KA++ G+DLSPP KRRVRN TPSPEP++N++D +DLSPPRK R RND+PSPE + T TDL P RKR R+ TPSPEP D+SPPR+ R PQ TSE+V+DSDLSPPRK R+ESTGPASLK+Q KTGLISGS+IREEISKTKKDDWLRFKEMDPS+SGRGAEPV+RDKTKGERISKEE+L ++ GE+KPKEKELEWGKGLAQKRE E RLQELE EK KPFAR RDDPELDNMLKDR+RWGDPMAHLVKKK VL+DLGDAE+MKESGF++PQDIP HSWIVRKLDAAPNRYGIRPGRHWDGVDRSNGFEKKMFTKLNEKRATEREAYLWSVSDM Sbjct: 38 SSGVFVVDEDPVWQKPVNLEEDNDGNDSPDEKPLVDEDIEVKRMKKLEQIRLTRGLNSIAEDGSGWVSLSPKRTNTLDPNSDVSPPRRQRARNDTPSPEPGLRHSNSEREIEDLSPLRQPRSPGLKSDLSPPRRSRVQNDTPSAREDADLSPPRRRPSRTDLPEPLVKAAKEGSDLSPPRKRRVRNDTPSPEPVLNQSD-SDLSPPRKRRARNDSPSPERRMKPTRKDTDLLPLRKRSRRHHTPSPEP-------DMSPPRRSR-------------------------PQ------------------------TSEVVNDSDLSPPRKHRKESTGPASLKEQPKTGLISGSEIREEISKTKKDDWLRFKEMDPSISGRGAEPVYRDKTKGERISKEEFL-KSKRKGEDKPKEKELEWGKGLAQKRETEARLQELEREKDKPFARNRDDPELDNMLKDRIRWGDPMAHLVKKKHSVPVLRDLGDAEKMKESGFIIPQDIPAHSWIVRKLDAAPNRYGIRPGRHWDGVDRSNGFEKKMFTKLNEKRATEREAYLWSVSDM 539
BLAST of g.arboreum_cottongen_reftransV1_0005846 vs. ExPASy TrEMBL
Match: W9S5G4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_023337 PE=4 SV=1) HSP 1 Score: 527.324 bits (1357), Expect = 8.104e-176 Identity = 327/580 (56.38%), Postives = 404/580 (69.66%), Query Frame = 1 Query: 211 SSGVLVVDEDPVWQKPVNLEEDEGNDSPDE-KPLVDEDIEVKRMKRLEQIRLRRGYNAIAEDGSGWVSLSPKHANTVDPNSDISPPRRQRTRNDTPSPEPGLRHSNSEIEAKDLSPP------RKPRSPGLKSDLSPPRRSRAHNETTLTXXXXXXXXXXXXXXXXXXXXXXLKASRGGTDLSPPWKRRVRNGTPSPE----PLVNRADGTDLSPPRKHRVRNDTPSPEPLVNR---TDGTDLSPPRKRRVRNDTPSPEPLAN--RAGADLSPPRKRRARNDTPSPKRRVKPLREG-ADSDMSPPQQRSRRRHTQ-----SPEPDMSPPRQSHAQTSELVHDSDLSPPRKSRRESTGPASLKQQSKTGLISGSDIREEISKTKKDDWLRFKEMDPSVSGRGAEPVFRDKTKGERISKEEYLXXXXXXXXXXXXXXXXXXXXXLAQKREAETRLQELELEKSKPFARTRDDPELDNMLKDRLRWGDPMAHLVKKKQPELVLKDLGDAERMKESGFVVPQDIPPHSWIVRKLDAAPNRYGIRPGRHWDGVDRSNGFEKKMFTKLNEKRATEREAYLWSVSDM 1884 ++ VLVVDEDPVWQKPV LEE+ NDS DE KP V EDIEVKRM+RLE +R +RG +I+EDGSGWV+LSPK +N + NSD+SP R++ +RNDTPSP+ GL+ S S E DLSPP SP + D S R+ RA +T + K + D SPP + R RNGTPSPE P+ + DL PPR+ R R DTPSP P +R + DLSPPR+ R +NDTPSPE + DLSPPR+R+ R+ TPSP+ +K R A +D+SPP+ R Q S D SPPR++ + DLSPPRK+++E + ++Q KTGLISG DIREEI +TKK D LRF++MDPS+SGRGAEPV+RDK +GERI+KEE+L ++ EEKPKE +LEWGKGLAQKREAE RLQELELEK KPFA++RDDPELD MLK+R+RWGDPMAHLVK+KQ E VL +LGD+E+MKESGF++PQDIP HSW+ R LDAAPNRYGI+PGRHWDGVDRS+G+EK++F ++NEKRATEREAYLWSVSDM Sbjct: 40 ATSVLVVDEDPVWQKPVVLEEENDNDSADEEKPQVYEDIEVKRMRRLELLRAKRGLKSISEDGSGWVTLSPKCSNINNSNSDLSPLRKRTSRNDTPSPKRGLKPSASG-EGSDLSPPWQRGRRHHTPSPEMDIDFSLARKQRAQIDTQSSEHGE-------------------KPRKEDMDFSPPRRGRARNGTPSPEHDGKPV---KENLDLLPPRRGRARYDTPSPSPSPDRKPIKENLDLSPPRRGRAQNDTPSPEHYSRPVNEDVDLSPPRQRQKRHHTPSPEPEMKSERPSVACNDISPPRGGRRDSPHQANLRGSLGSDHSPPRKN--------RNDDLSPPRKNKKE-VSVSDTREQRKTGLISGPDIREEIVRTKKQDLLRFQDMDPSISGRGAEPVYRDKIRGERITKEEFL-KSQRKVEEKPKEIKLEWGKGLAQKREAEARLQELELEKDKPFAQSRDDPELDKMLKERVRWGDPMAHLVKRKQSEPVLPNLGDSEKMKESGFIIPQDIPNHSWLKRGLDAAPNRYGIKPGRHWDGVDRSSGYEKELFKRMNEKRATEREAYLWSVSDM 586
BLAST of g.arboreum_cottongen_reftransV1_0005846 vs. ExPASy TrEMBL
Match: A0A067LMB6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11848 PE=4 SV=1) HSP 1 Score: 503.442 bits (1295), Expect = 2.462e-167 Identity = 324/564 (57.45%), Postives = 381/564 (67.55%), Query Frame = 1 Query: 217 GVLVVDEDPVWQKPVNLEEDEGNDSPDEKPLVDEDIEVKRMKRLEQIRLRRGYNAIAEDGSGWVSLSPKHANTVDPNSDISPPRRQRTRNDTPSPEPGLRHSNSEIEAKDLSPP----RKPRSPGLKSDLSPPRRSRAHNETTLTXXXXXXXXXXXXXXXXXXXXXXLKASRGGTDLSPPWKRRVRNGTPSPEP----LVNRADGTDLSPPRKHRVRNDTPSPEPLVNRTDGTDLSPPRKRRVRNDTPSPEPLANRAGADLSPPRKRRARNDTPSPKRRVKPLREGADSDMSPPQQRSRRRHTQSPEPDMSPPRQSHAQTSELVHDSDLSPPRKSRRESTGPASLKQQSKTGLISGSDIREEISKTKKDDWLRFKEMDPSVSGRGAEPVFRDKTKGERISKEEYLXXXXXXXXXXXXXXXXXXXXXLAQKREAETRLQELELEKSKPFARTRDDPELDNMLKDRLRWGDPMAHLVKKKQPELVLKDLGDAERMKESGFVVPQDIPPHSWIVRKLDAAPNRYGIRPGRHWDGVDRSNGFEKKMFTKLNEKRATEREAYLWSVSDM 1884 GVLVVDEDPVW KP+ LEE+E + + +EKP VDEDIEVKRMKRLEQ+R + NAIAEDGSGWVSLSPK AN V+ +SD+SPP RQ TRNDTPSPEP R S +A DLSPP ++ P +SDLSPPR+ R N+T S K SR D SPP + R + +PSPEP + + DLSPPRK R+ D DLSPPR++R R+ TPSPEP N G DLSPPRK R K + + A D+SP QR P+ S + + HD ++ S+ S K + KTGLISG DI+EEISK KKDD LRF++MDP ++G+GAEP++RDK KG+RISKEE+L ++ EEKPKEK+LEWGKGLAQKREAE RLQELELEK KPFARTRDDPELD MLK+RLRWGDPMAHLVK+K E VL+DLGD+E+MKESGF+VPQ IP HSWI R LDAAPNRYGI+PGRHWDGVDRSNGFEKKMF ++NEKRATEREAYLWSVSDM Sbjct: 41 GVLVVDEDPVWHKPIKLEEEENDSADEEKPQVDEDIEVKRMKRLEQLRAKWANNAIAEDGSGWVSLSPKRANFVNQDSDMSPPCRQSTRNDTPSPEPSERPSAGGKDA-DLSPPWQQQKRHYIPPPESDLSPPRKRRIQNDTPSPDPPS-------------------KPSREVADFSPPRQPRKHHYSPSPEPDTKLRYSNSPLPDLSPPRKQRIGKD-------------ADLSPPRQQRRRHHTPSPEP-QNSPGPDLSPPRKSR------------KGVDKLASLDLSP--QRL--------------PKNSSSIMNGSSHD---------KKGSSDLVSSKDRPKTGLISGRDIQEEISKLKKDDLLRFQQMDPKMTGQGAEPIYRDK-KGQRISKEEFL-KSKQKVEEKPKEKKLEWGKGLAQKREAEVRLQELELEKEKPFARTRDDPELDKMLKERLRWGDPMAHLVKRKHSEPVLQDLGDSEKMKESGFIVPQGIPNHSWIKRGLDAAPNRYGIKPGRHWDGVDRSNGFEKKMFQRVNEKRATEREAYLWSVSDM 531
BLAST of g.arboreum_cottongen_reftransV1_0005846 vs. ExPASy TrEMBL
Match: M1C269_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400022576 PE=4 SV=1) HSP 1 Score: 482.256 bits (1240), Expect = 1.438e-158 Identity = 339/616 (55.03%), Postives = 417/616 (67.69%), Query Frame = 1 Query: 112 ASSLKEYLXXXXXXXXXXXXXXXXXXXXXXXXXSSGVLVVDEDPVWQKPVNLEEDEGNDSPDEKPLVDEDIEVKRMKRLEQIRLRRGYNAIAEDGSGWVSLSPKHANTVDPNSDISPPRRQRTRNDTPSPEPGLRHSNSEIEAKDLSPPRKPRS--------PGLK------SDLSPPRRSRAHNETTLTXXXXXXXXXXXXXXXXXXXXXXLK-ASRGGTDLSPPWKRRVRNGTPSPE--PLVNRADGTDLSPPRKHRVRNDTPSPEPLVNRTDGTDLSPPRKRRVRNDTPSPEPLANRAGADLSPPRKRRARNDTPSPKRRVKPLREGADSDMSPPQQRSRRRHTQSPEPDMSPPRQ-SHAQT-SELVHDSDLSPPRKSRRESTGPASL-----KQQSKTGLISGSDIREEISKTKKDDWLRFKEMDPSVSGRGAEPVFRDKTKGERISKEEYLXXXXXXXXXXXXXXXXXX-XXXLAQKREAETRLQELELEKSKPFARTRDDPELDNMLKDRLRWGDPMAHLVKKKQPELVLKDLGDAERMKESGFVVPQDIPPHSWIVRKLDAAPNRYGIRPGRHWDGVDRSNGFEKKMFTKLNEKRATEREAYLWSVSDM 1884 ++SLKEYLK+YE+ EE +KK++KKKK + GV+VVDEDPVWQKPV +E++E + +E P V+EDIEVKRMKRLEQIR RR + +++EDGSGWVS+S + + D SD+SP R++ RND+PSP+P L N A DLSPPRKPR+ G K DLSPPR+ A N+T T R SPEP+LK +S DLSPP KRRVRN TP E PL R D+SPPR+ R RNDTP + R+ TD+SPPR+RR RNDTPSPEP A R ADLSPPR+R+ + SD+S D+SPPR+ S AQ S +DLSP RK + ++ A L KQ KTGL+SG DI+EEI +TKK+DW+RF+EMDP VSGRGAEPV+RDK G+R+SKEE+LKSK+K E++ ++ GKGLAQKRE E RLQELE EK KPFAR+RDDPELD MLK+R+RWGDPMAHLVKKK + +L D G E+MK+SGF++PQDIP HSWI R LDAAPNRYGIRPGRHWDGVDRS G+EK++F + NEK+ATE+EAYLWSVSDM Sbjct: 8 STSLKEYLKKYESNTNEEGKKKQKKKKKVKPNDVKGVVVVDEDPVWQKPVKIEDEEDESADEELPQVNEDIEVKRMKRLEQIRARRPFGSVSEDGSGWVSVS---STSNDQISDLSPTRKRPGRNDSPSPDPQL---NPSSPAADLSPPRKPRARNDTPSPESGRKQPRTQEGDLSPPRKRSARNDTQRT------------RIRTPSPEPQLKPSSAKDADLSPPRKRRVRNDTPELEMKPLSTR--DADISPPRRQRARNDTPESDMKSLRSRDTDISPPRRRRTRNDTPSPEPKA-RPSADLSPPRRRQKYGQSL--------------SDIS----------------DVSPPRRGSRAQGDSRADQATDLSPLRKKKAQNALEARLDSSTTKQGPKTGLVSGKDIKEEIDRTKKEDWMRFQEMDPLVSGRGAEPVYRDKITGQRMSKEEFLKSKKKKEEKEKPKEIKLEWGKGLAQKREMEVRLQELESEKDKPFARSRDDPELDTMLKERVRWGDPMAHLVKKKL-DPILPDFGANEKMKDSGFIIPQDIPSHSWIKRGLDAAPNRYGIRPGRHWDGVDRSTGYEKELFKRTNEKQATEKEAYLWSVSDM 571
BLAST of g.arboreum_cottongen_reftransV1_0005846 vs. ExPASy TrEMBL
Match: A0A068V8C4_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_136 OS=Coffea canephora GN=GSCOC_T00019305001 PE=4 SV=1) HSP 1 Score: 482.256 bits (1240), Expect = 1.841e-158 Identity = 310/587 (52.81%), Postives = 383/587 (65.25%), Query Frame = 1 Query: 214 SGVLVVDEDPVWQKPVNLEEDEGNDSPDE-KPLVDEDIEVKRMKRLEQIRLRRGYNAIAEDGSGWVSLS--PKHANTVDPNSDISPPRRQRTRNDTPSPEPGLRHSNSEIEAKDLSPPRKPRSPGLKSDLSPPRRSRAHNETTLTXXXXXXXXXXXXXXXXXXXXXXLKASRGGTDLSPPWKRRVRNGTPSPEP-LVNRADGTDLSPPRKHRVRNDTPSPEPLVNRTDGTDLSPPRKRRVRNDTPSPE-----PLANRAGADLSPPRKRRARNDTPSPKRRVKPLREGA-DSDMSPPQQRSRRRHTQSPEPDMSPPRQS-----------------HAQTSELVHDS---DLSPPRKSRRESTGPASLKQQSKTGLISGSDIREEISKTKKDDWLRFKEMDPSVSGRGAEPVFRDKTKGERISKEEYLXXXXXXXXXXXXXXXXXXXXXLAQKREAETRLQELELEKSKPFARTRDDPELDNMLKDRLRWGDPMAHLVKKKQPELVLKDLGDAERMKESGFVVPQDIPPHSWIVRKLDAAPNRYGIRPGRHWDGVDRSNGFEKKMFTKLNEKRATEREAYLWSVSDM 1884 +GV+VVDEDPVWQKPV +EE+E NDS DE KP+VDEDIEVKRMKRLE +R RR + +I+EDGSGWVS+S PK +N D DISPPRR+R DTPSPE L+ ++ G DLSPPR+ R N+T G + R RN +PSPEP +RA G D SPPR+ + + + D D+SPPR+R+ DT S + + R DLSPPR++R R+ +PSP R + G DSD+SPP+ + SP D+SPPR+ H ++ S DLSPPRK R+ P S KQQ KTGL++G D++EEI++ K++D LRFKEMDPS+SGRGAEPV+RDK G+R+SK+E+L K + EEKPKE +LEWGKGLAQKREAE RLQELE EK KPFAR RDDPELD MLK+R+RWGDPMAHLVKK+Q E V++DLGD E+MKESGF++PQ+IP HSW+ R LDAAPNRYGI+PGRHWDGVDRSNGFEK+MF ++NEK+ATEREAYLWSVSDM Sbjct: 38 TGVVVVDEDPVWQKPVRIEEEEENDSADEEKPVVDEDIEVKRMKRLELLRARRPFGSISEDGSGWVSISDAPKTSNFGDKVLDISPPRRRRA--DTPSPEHDLKSAS-----------------GRDVDLSPPRKRRVRNDTPSPEPMLRP------------------PGTGDAESLLERTRTTRNDSPSPEPDWRSRAAGADFSPPRQRQ--------KHYLKEKDERDISPPRRRKASYDTSSSKSGFGPSESRREVVDLSPPRRQRVRHLSPSPLTREETSSPGDPDSDLSPPRHFHQDHLHTSPVADLSPPRKGRKDRSVSSDLSARRATQHLDENDAAQASSALDLSPPRK--RKEKSPTS-KQQVKTGLVTGQDLKEEIARKKEEDMLRFKEMDPSISGRGAEPVYRDKVTGKRMSKDEFL--KSQKKEEKPKEVKLEWGKGLAQKREAEARLQELEGEKDKPFARRRDDPELDRMLKERVRWGDPMAHLVKKRQFEPVMEDLGDDEKMKESGFIIPQEIPSHSWLRRGLDAAPNRYGIKPGRHWDGVDRSNGFEKQMFKRMNEKQATEREAYLWSVSDM 574
BLAST of g.arboreum_cottongen_reftransV1_0005846 vs. ExPASy TrEMBL
Match: V4T9X0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033653mg PE=4 SV=1) HSP 1 Score: 477.633 bits (1228), Expect = 7.674e-157 Identity = 307/588 (52.21%), Postives = 376/588 (63.95%), Query Frame = 1 Query: 211 SSGVLVVDEDPVWQKPVNLEE-DEGNDSPDE-KPLVDEDIEVKRMKRLEQIRLRRGYNAIAEDGSGWVSLSPKHANTVDPNSDISPPRRQRTRNDTPSPEPGLRHSNSEIEAKDLSPPRKPRSPGLKSDLSPPRRSRAHNETTLTXXXXXXXXXXXXXXXXXXXXXXLKASRGGTDLSPP--WKRRVRNGTPSPEPLVNRADG--TDLSPPRKHRVRNDTPSPEPLVNR--TDGTDLSPPRKRRVRNDTPSPEP---LANRAG--ADLSPPRKRRARNDTPSPKRRVKPLREGADSDMSPPQQRSRRRHTQSPEPDMSPPRQSHAQTSELVHDSDLSPPRKSRRESTG-------------PASLKQQSK----TGLISGSDIREEISKTKKDDWLRFKEMDPSVSGRGAEPVFRDKTKGERISKEEYLXXXXXXXXXXXXXXXXXXXXXLAQKREAETRLQELELEKSKPFARTRDDPELDNMLKDRLRWGDPMAHLVKKKQPELVLKDLGDAERMKESGFVVPQDIPPHSWIVRKLDAAPNRYGIRPGRHWDGVDRSNGFEKKMFTKLNEKRATEREAYLWSVSDM 1884 ++GVL+VDEDPVWQKPVNLEE D+GNDS DE KP VDEDIEVKRMKRLEQ+RLRR YN IAEDGSGWVSL D PP Q+ SD+SPPR+ R N++ + ++R TDLSPP W+ R +P + G +DLSPP K R ND+PSPE L + + +DLSPPR+RR R TPSPEP + G +DLSPPRKRRARNDTP + +KP G D+D+SPP+Q + +T SPEP++S R+ +S SDLSP R+++++ T P +++ K TGLI+G DI EEIS KK+D LRF+E+DPSV+G GAE V+RDK KG RISKE YLKSK K E+ ++K LAQK+EAE RL+ELELEK KPFARTRDDPELD ++KDR+RWGDPMAHLVK+K E VL+DLG+ E+MKESGFV+PQDIP HSWI R LDAAPNRYGIRPGRHWDGVDRSNG+EK++F + NEK+AT+REAYLWSV+DM Sbjct: 42 AAGVLIVDEDPVWQKPVNLEEEDDGNDSADEEKPQVDEDIEVKRMKRLEQLRLRRPYNGIAEDGSGWVSL------------DTLPPGSQKP----------------------------------DSDMSPPRKQRTRNDSPSPEPEPRPPA----------------SARDTTDLSPPQQWQNRRDTSLHDSDPKSAHSCGLNSDLSPPHKRRAGNDSPSPE-LREKPARESSDLSPPRQRRRRYHTPSPEPEQKIGKSRGLDSDLSPPRKRRARNDTPELEPGLKPA--GEDADLSPPRQPRKHHNTPSPEPEISVSRRVERGSSN--RGSDLSPRRRNKKDPTSGKPGLPVVPDLSPPRKIQKDEKGIQRTGLITGKDISEEISNRKKEDLLRFQELDPSVTGLGAEAVYRDK-KGGRISKEVYLKSKEKRKEKPEEKKLEWGKG-LAQKQEAEARLRELELEKEKPFARTRDDPELDKIMKDRIRWGDPMAHLVKRKHSEPVLQDLGENEKMKESGFVIPQDIPSHSWIKRGLDAAPNRYGIRPGRHWDGVDRSNGYEKQLFKRTNEKQATQREAYLWSVADM 560
BLAST of g.arboreum_cottongen_reftransV1_0005846 vs. ExPASy TrEMBL
Match: V4KQT6_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10007193mg PE=4 SV=1) HSP 1 Score: 477.633 bits (1228), Expect = 8.632e-157 Identity = 321/573 (56.02%), Postives = 386/573 (67.36%), Query Frame = 1 Query: 211 SSGVLVVDEDPVWQKPVNLEEDEG-NDSPDEKPLVDEDIEVKRMKRLEQIRLRRGYNAIAEDGSGWVSLSPKHANTVDPNSDISPPRRQRTRNDTPSPEPGLRHSNSEIEAKDLSPPRKPRSPGLKSDLSP-PRRSRAHNETTLTXXXXXXXXXXXXXXXXXXXXXXLKASRGGTDLSPPWKRRVRNGTPSPEP--LVNRADGTDLSPPRKHRVRNDTPSPEPLVNRTDGT----DLSPPRKRR-VRNDTPSPEPLANRAGADLSPPRKRRARNDTPSPKRRVKPLRE-GADSDMSPPQQRSRRRHTQSPEPDMSPPRQS--HAQTSELVHDS---DLSPPRKSRRESTGPASLKQQSKTGLISGSDIREEISKTKKDDWLRFKEMDPSVSGRGAEPVFRDKTKGERISKEEYLXXXXXXXXXXXXXXXXXXXXXLAQKREAETRLQELELEKSKPFARTRDDPELDNMLKDRLRWGDPMAHLVKKKQPELVLKDLGDAERMKESGFVVPQDIPPHSWIVRKLDAAPNRYGIRPGRHWDGVDRSNGFEKKMFTKLNEKRATEREAYLWSVSDM 1884 + GVLVVDEDPVWQK V+ EE++ +DS +E+P+VDEDIEVKRM+RLE+I+ RR NAIAEDGSGWV+L P N DPNSDISPPRR RTRND+PSPEPG R S S+ D+SPPR+ K +P P +R H K +DL+PP KR+ RN +PSPEP V + DLSPPR+ V PSPE R+D DLSPPR++R +R SP R DLSPPR+RR + +P P R KP + G++SD+SPP RR S + D+SP R++ ++S+ V S D SPPR+ RRES + K+Q KTGLISG DI E K K D+ LRFK MD ++G+ AE VFRDK G+RI+KEEYL+SK+K EKPKE +LEWGKGLAQKREAE R+QELELEK KPFARTRDDPELD M+K+R+RWGDPMAHLVKKKQ E L DLGD E+MKESGFV+PQ IP HSWI R L+ A NRYGI+PGRHWDGVDRSNG E+ M + NEK+ATEREAYLWSVSDM Sbjct: 40 AKGVLVVDEDPVWQKQVDPEEEKNEDDSAEERPMVDEDIEVKRMRRLEEIKARRAQNAIAEDGSGWVTLPP---NREDPNSDISPPRRHRTRNDSPSPEPGHRRSVSDRVETDMSPPRR-----RKRHYTPSPEPNRKH----------------------------AKPVTSDSDLTPPRKRKARNDSPSPEPEDKVPKNLSEDLSPPRRRHVH--PPSPESSRKRSDSIELDGDLSPPRRKRDIRG---SPVLDVKRESNDLSPPRRRRYHSPSPEPGR--KPSKSFGSNSDLSPP----RRSVKGSRDSDLSPQRKTVDSRRSSDNVSRSSNFDSSPPRRPRRESPPHQTSKEQRKTGLISGKDIGSEYRKKKADEQLRFKNMDSELTGQNAEAVFRDKITGKRITKEEYLQSKQKKVVEKPKEIKLEWGKGLAQKREAEARIQELELEKEKPFARTRDDPELDQMMKERVRWGDPMAHLVKKKQHETSLVDLGDDEKMKESGFVIPQTIPKHSWITRGLEPAFNRYGIKPGRHWDGVDRSNGHERDMLKRTNEKKATEREAYLWSVSDM 565
BLAST of g.arboreum_cottongen_reftransV1_0005846 vs. ExPASy TrEMBL
Match: B9N2S3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s08550g PE=4 SV=1) HSP 1 Score: 476.863 bits (1226), Expect = 9.222e-157 Identity = 322/572 (56.29%), Postives = 389/572 (68.01%), Query Frame = 1 Query: 211 SSGVLVVDEDPVWQKPVNLEEDEGNDSPDEKPLVDEDIEVKRMKRLEQIRLRRGYNAIAEDGSGWVSLSPKHANTVDPNSDISPPRRQRTRNDTPSPEPGLRHSNSEIEAKDLSPPRKPR------SPG----LKSDLSPPRRSRAHNETTLTXXXXXXXXXXXXXXXXXXXXXXLKASRGGTDLSPPWKRRVRNGTPSPEPLVNRAD----GTDLSPPRKHRVRNDTPSPEPLVNRTDGTDLSPPRKRRVRNDTPSPEPLANRAGADLSPPRKRRARNDTPSPKRRVKPLREGADSDMSPPQQRSRRRHTQSPEPDMSPPRQSHAQTSELVHDSDLSPPRKSRRESTGPASLKQQSKTGLISGSDIREEISKTKKDDWLRFKEMDPSVSGRGAEPVFRDKTKGERISKEEYLXXXXXXXXXXXXXXXXXXXXXLAQKREAETRLQELELEKSKPFARTRDDPELDNMLKDRLRWGDPMAHLVKKKQPELVLKDLGDAERMKESGFVVPQDIPPHSWIVRKLDAAPNRYGIRPGRHWDGVDRSNGFEKKMFTKLNEKRATEREAYLWSVSDM 1884 +SGVLVVDEDPVWQKPV LEE+E + + DE P VDEDIEVKRMKRLE IR RR YNAIAEDGSGWV L P HAN+ DP D+SP +++ RNDTPSPE + ++ + DLSPPR+ + SP L SDLSPPR R N+T SPEPRLK SR +DLSPP +++ + +PSP+P +DLSPPR+ R ++P +PL + TDLSPPR++R R+ TPSP+P DLSPPRKR+ ++ S + S + TQS R S AQ D+SPPRK+R+ES+ P S K+ KTGLI+G D+REEI KTKK+ L F +MDPS+SGRG EPV+R ERISK++YL ++ EEKPKEK+LEWGKGLAQKRE ETRL+ELELEK KPFARTRDDPELD ML +R+RWGDPMAHLVKKK EL L DLGD+E+MKESGF++PQDIP HSWI R LDAAPNRYGIRPGRHWDGVDRSNG+EK++ ++NEK+ATEREAYLWSVSDM Sbjct: 40 ASGVLVVDEDPVWQKPVKLEEEENDSADDENPQVDEDIEVKRMKRLELIRARRAYNAIAEDGSGWVILPPNHANSADPYPDMSPLHKRKVRNDTPSPEHEGKPLHNGGDDADLSPPRQQQRQHHSPSPAPDTNLNSDLSPPRNRRYRNDT-------------------PSPEPRLKPSREASDLSPPRRQQKHHHSPSPKPYTKSKHTSVLNSDLSPPRRRRTDTESPKLKPL---KEDTDLSPPRQQRRRHYTPSPKP-----EPDLSPPRKRK---------------KDVGRSGLPDNSHLSLQLSTQS-----GNSRASMAQ--------DISPPRKNRKESSDPVSSKEPPKTGLITGRDMREEI-KTKKEASLLFDKMDPSISGRGVEPVYR-----ERISKDDYL-KSKQKVEEKPKEKKLEWGKGLAQKREVETRLEELELEKDKPFARTRDDPELDKMLMERVRWGDPMAHLVKKKHSELDLADLGDSEKMKESGFIIPQDIPSHSWIKRGLDAAPNRYGIRPGRHWDGVDRSNGYEKQLVKRVNEKQATEREAYLWSVSDM 549
BLAST of g.arboreum_cottongen_reftransV1_0005846 vs. ExPASy Swiss-Prot
Match: CWC26_CRYNJ (Pre-mRNA-splicing factor CWC26 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=CWC26 PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 2.099e-10 Identity = 43/117 (36.75%), Postives = 56/117 (47.86%), Query Frame = 1 Query: 1534 FARTRDDPELDNMLKDRLRWGDPMAHLVKKKQPELVLKDLGDAERMKESGFVVPQDIPPHSWIVRKLDAAPNRYGIRPGRHWDGVDRSNGFEKKMFTKLNEKRATEREAYLWSVSDM 1884 R++DD ++ +K+ RW DP A + KK+ + + + P W APNR+GI PG WDGVDRSNGFEKK F N + E E WSV DM Sbjct: 239 VGRSKDDVRMNKEMKEEERWNDPAAAFLTKKK----------KKGPRRPKYEGP-------W-------APNRFGIAPGFRWDGVDRSNGFEKKYFQAQNTRARREYEHNQWSVEDM 331
BLAST of g.arboreum_cottongen_reftransV1_0005846 vs. ExPASy Swiss-Prot
Match: CWC26_CRYNB (Pre-mRNA-splicing factor CWC26 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=CWC26 PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 2.099e-10 Identity = 43/117 (36.75%), Postives = 56/117 (47.86%), Query Frame = 1 Query: 1534 FARTRDDPELDNMLKDRLRWGDPMAHLVKKKQPELVLKDLGDAERMKESGFVVPQDIPPHSWIVRKLDAAPNRYGIRPGRHWDGVDRSNGFEKKMFTKLNEKRATEREAYLWSVSDM 1884 R++DD ++ +K+ RW DP A + KK+ + + + P W APNR+GI PG WDGVDRSNGFEKK F N + E E WSV DM Sbjct: 239 VGRSKDDVRMNKEMKEEERWNDPAAAFLTKKK----------KKGPRRPKYEGP-------W-------APNRFGIAPGFRWDGVDRSNGFEKKYFQAQNTRARREYEHNQWSVEDM 331
BLAST of g.arboreum_cottongen_reftransV1_0005846 vs. ExPASy Swiss-Prot
Match: CWC26_DEBHA (Pre-mRNA-splicing factor CWC26 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=CWC26 PE=3 SV=2) HSP 1 Score: 61.2326 bits (147), Expect = 6.358e-9 Identity = 38/115 (33.04%), Postives = 56/115 (48.70%), Query Frame = 1 Query: 1516 LEKSKPFARTRDDPELDNMLKDRLRWGDPMAHLVKKKQPELVLKDLGDAERMKESGFVVPQDIPPHSWIVRKLDAAPNRYGIRPGRHWDGVDRSNGFEKKMFTKLNEKRATEREA 1860 L+++K F+ + D E + ++K + R+ DP+ +KQ K +M + V PQ NR+ IR G WDG+DRSNGFE + K NE T+REA Sbjct: 161 LDQNKSFSVSTRDSEYNELMKSKQRFDDPLQSFSSQKQTVATSK----TGKMYYNKGVSPQ----------------NRFNIRAGFFWDGIDRSNGFEDLIVRKRNEVSYTKREA 255 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0005846 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0005846 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 13
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0005846 ID=g.arboreum_cottongen_reftransV1_0005846; Name=g.arboreum_cottongen_reftransV1_0005846; organism=Gossypium arboreum; type=contig; length=2091bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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