g.arboreum_cottongen_reftransV1_0013834, g.arboreum_cottongen_reftransV1_0013834 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0013834
Unique Nameg.arboreum_cottongen_reftransV1_0013834
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length1987
Homology
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy TrEMBL
Match: V7AQF3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G139400g PE=3 SV=1)

HSP 1 Score: 839.336 bits (2167), Expect = 0.000e+0
Identity = 437/507 (86.19%), Postives = 464/507 (91.52%), Query Frame = 1
Query:  205 MSRYDSRSGDPASYRDRRXXXXXXXXXXXX--XXXXXXXXRKDYDAGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGKGYSGGRTWS 1719
            MSRYDSRS DP SYRDRRSDSG G ++ +G      S + R   D G P R L LDGL  FEKNFY+ESP+V AM++ EV EYRQ+REITVEGRD+PKPVK+F D  FP+YVLQE+ KAGF EPT IQ+QGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPIL PGDGPIVLVLAPTRELAVQIQQEA KFGASSRIK+TCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDML+S+HTNL+RVTYLVLDEADRMLDMGF+PQ+RKIVSQIRPDRQTLYWSATWPKEVEQLAR+FLYNPYKVIIGS DLKANHAIRQ+V+IVSE QKY+KLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFK+GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPP PSG  GF+DRG+GY   R WS
Sbjct:    1 MSRYDSRSSDPTSYRDRRSDSGLGASTGFGGPVQHSSSNKRDHDDGGSPKRNLSLDGLPHFEKNFYIESPAVRAMTDAEVNEYRQQREITVEGRDIPKPVKTFQDAGFPEYVLQEITKAGFTEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQEATKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESNHTNLQRVTYLVLDEADRMLDMGFDPQLRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYNPYKVIIGSEDLKANHAIRQYVDIVSEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPLPSGPRGFQDRGRGYGSSRPWS 507          
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy TrEMBL
Match: M5XBL9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004545mg PE=3 SV=1)

HSP 1 Score: 837.025 bits (2161), Expect = 0.000e+0
Identity = 435/486 (89.51%), Postives = 458/486 (94.24%), Query Frame = 1
Query:  205 MSRYDSRSGDPASYRDRRXXXXXXXXXXXXXXXXXXXXRKDYDAGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPS 1662
            MSRYDSRSGDP SYRDR+SDSGFG     G +  S S +KD D  E PRK DLDGLTPFEKNFYVESP V  MSE EVE+YRQ+REIT+EGRDVPKP+KSF D  FP+YVL+EV KAGFVEPT IQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPIL+PGDGPIVLVLAPTRELAVQIQQEA KFG+SS+IK+TCIYGGVPKGPQVRDLQ+GVEIVIATPGRLIDM++SHHTNLRRVTYLVLDEADRMLDMGF+PQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGS DLKANHAIRQ V+I++E+QKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVK+VINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIA+LEEAGQKVSPELAAMGRGAPPPPS
Sbjct:    1 MSRYDSRSGDPTSYRDRKSDSGFGVTGYGGSARSSSS-KKDCDGAESPRKFDLDGLTPFEKNFYVESPEVERMSEKEVEDYRQRREITIEGRDVPKPIKSFRDTGFPEYVLEEVTKAGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEATKFGSSSKIKSTCIYGGVPKGPQVRDLQRGVEIVIATPGRLIDMIESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSPDLKANHAIRQIVDIITENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKFVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIALLEEAGQKVSPELAAMGRGAPPPPS 485          
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy TrEMBL
Match: A2Q465_MEDTR (DEAD-box ATP-dependent RNA helicase OS=Medicago truncatula GN=MTR_2g100230 PE=3 SV=1)

HSP 1 Score: 835.869 bits (2158), Expect = 0.000e+0
Identity = 435/505 (86.14%), Postives = 459/505 (90.89%), Query Frame = 1
Query:  205 MSRYDSRSGDPASYRDRRXXXXXXXXXXXXXXXXXXXXRKDYDAGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGKGYSGGRTWS 1719
            MSRYDSRS DP SYRDRRSDSG    S           + +  +  P RK++LDGL  FEKNFY ESPSV AM+E EV EYR +REITVEG+DVPKPVKSF+D  FPDYVL+EV KAGFVEPT IQ+QGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPIL PGDGPIVLVLAPTRELAVQIQQEA KFGASSRIK+TCIYGGVPKGPQVRDLQKGVEI+IATPGRLIDML+S+HTNLRRVTYLVLDEADRMLDMGF+PQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGS DLKANHAI+Q+V+IV E QKY+KLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFK+GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELI+ILEEAGQ+VS ELAAMGRGAPPPPS  GGFRDRGK +  GR WS
Sbjct:    1 MSRYDSRSSDPTSYRDRRSDSGLAAPSPSPSPSI----KNEGASASPARKINLDGLPHFEKNFYSESPSVRAMTEAEVTEYRLRREITVEGKDVPKPVKSFSDAAFPDYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQEATKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIIIATPGRLIDMLESNHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELISILEEAGQRVSSELAAMGRGAPPPPS--GGFRDRGKSFGSGRPWS 499          
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy TrEMBL
Match: I3SPD5_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 833.558 bits (2152), Expect = 0.000e+0
Identity = 433/505 (85.74%), Postives = 458/505 (90.69%), Query Frame = 1
Query:  205 MSRYDSRSGDPASYRDRRXXXXXXXXXXXXXXXXXXXXRKDYDAGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGKGYSGGRTWS 1719
            MSRYDSRS DP SYRDRRSDSG    S           + +  +  P RK++LDGL  FEKNFY ESPSV AM+E EV EYR +REITVEG+DVPKPVKSF+D  FPDYVL+EV KAGFVEPT IQ+QGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPIL PGDGPIVLVLAPTRELAVQIQQEA KFGASSRIK+TCIYGGVPKGPQVRDLQKGVEI+IATPGRLIDML+S+HTNLRRVTYLVLDEADRMLDMGF+PQIRKIV QIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGS DLKANHAI+Q+V+IV E QKY+KLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFK+GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIG+TGRAGAKGTAYTFFTAANARFAKELI+ILEEAGQ+VS ELAAMGRGAPPPPS  GGFRDRGK +  GR WS
Sbjct:    1 MSRYDSRSSDPTSYRDRRSDSGLAAPSPSPSPSI----KNEGASASPARKINLDGLPHFEKNFYSESPSVRAMTEAEVTEYRLRREITVEGKDVPKPVKSFSDAAFPDYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQEATKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIIIATPGRLIDMLESNHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVPQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGKTGRAGAKGTAYTFFTAANARFAKELISILEEAGQRVSSELAAMGRGAPPPPS--GGFRDRGKSFGSGRPWS 499          
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy TrEMBL
Match: D7KM60_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_474570 PE=3 SV=1)

HSP 1 Score: 828.935 bits (2140), Expect = 0.000e+0
Identity = 432/501 (86.23%), Postives = 470/501 (93.81%), Query Frame = 1
Query:  205 MSRYDSRSGDPASYRDRRXXXXXXXXXXXXXXXXXXXXRKDYDAGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRG--KGYS 1701
            MSRYDSR+GD  S+RDRRSDSGFGG SAYG SG   SS+KD D  E PRKLDLDGLTPFEKNFYVESP+VAAM++ EVEEYR+ REITVEG+D+PKPVKSF DV FPDYVL+E+ KAGF EPT IQ+QGWPMA+KGRDLIGIAETGSGKT++YLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEA+KFG+SS+IK+TCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM++S++TNLRRVTYLVLDEADRMLDMGF+PQIRKIVS IRPDRQTLYWSATWPKEVEQL+++FLYNPYKVIIGS+DLKAN AIRQ V+++SESQKYNKLVKLLEDIMDGSRIL+F+DTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEF++GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFT ANARFAKEL  ILEEAGQKVSPELA+MGR   PPP G GGFRDRG  +G+S
Sbjct:    1 MSRYDSRTGDSTSFRDRRSDSGFGGTSAYGSSGSHSSSKKDNDGNESPRKLDLDGLTPFEKNFYVESPTVAAMTDTEVEEYRKLREITVEGKDIPKPVKSFRDVGFPDYVLEEIKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTISYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEASKFGSSSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESNNTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHIRPDRQTLYWSATWPKEVEQLSKKFLYNPYKVIIGSSDLKANRAIRQIVDVISESQKYNKLVKLLEDIMDGSRILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTVANARFAKELSNILEEAGQKVSPELASMGRSTAPPPPGLGGFRDRGSRRGWS 501          
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy Swiss-Prot
Match: DBP2_CANGA (ATP-dependent RNA helicase DBP2 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=DBP2 PE=3 SV=1)

HSP 1 Score: 567.385 bits (1461), Expect = 0.000e+0
Identity = 298/494 (60.32%), Postives = 363/494 (73.48%), Query Frame = 1
Query:  187 RTAAHKMSRYDSRSGDPASYRDRRXXXXXXXXXXXXXXXXXXXXRKDYDAGEPPRKL-------DLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDG--SRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGR 1641
            R A +  + Y+SR GD   +R  RS                   R  +D G  PR+L       +L  L PFEKNFYVE   V   S+ EV ++R++ E+T+ G D+PKP+ +F +  FPDYVL+EV   GF +PT+IQ QGWPMAL GRD++GIA TGSGKTL+Y LP IVH+NAQP+L+PGDGPIVLVLAPTRELAVQIQ+E +KFG SSRI+NTC+YGGVP+G Q+R+L +G EIVIATPGRLIDML++  TNL+RVTYLVLDEADRMLDMGFEPQIRKIV QIRPDRQTL WSATWPKEV+QLAR +L +P +V IGS +L A+H I Q V +VSE +K ++LVK L+       S+ILIF  TK+ CD+IT  LR DGWPAL+IHGDK Q ERDWVL+EF+ G SPIM ATDVAARG+DVK + +V+NYD PG++EDYVHRIGRTGRAGA GTA +FFT  N      LI+I+ EA Q +  EL    R
Sbjct:    4 RDALYNKTNYNSRGGD---FRGGRSSDRNDYNRDRNQGYSHGGLRGRHDDG--PRELIKPDWESELPNLPPFEKNFYVEHEVVRNRSDQEVAQFRKESEMTITGHDIPKPITTFDEAGFPDYVLKEVKAEGFDKPTSIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLSPGDGPIVLVLAPTRELAVQIQKECSKFGKSSRIRNTCVYGGVPRGQQIRELIRGAEIVIATPGRLIDMLEAGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQQLARDYLNDPIQVQIGSLELAASHNITQLVEVVSEFEKRDRLVKHLDTASQDKESKILIFASTKRTCDEITSYLRQDGWPALAIHGDKDQRERDWVLNEFRTGNSPIMVATDVAARGIDVKGINFVVNYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEDNKSLGASLISIMREAKQNIPEELMKYDR 492          
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy Swiss-Prot
Match: DBP2_CANAL (ATP-dependent RNA helicase DBP2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=DBP2 PE=3 SV=2)

HSP 1 Score: 567.385 bits (1461), Expect = 0.000e+0
Identity = 282/432 (65.28%), Postives = 340/432 (78.70%), Query Frame = 1
Query:  352 KLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMD--GSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGR 1641
            + DL+ L  FEKNFY E P VAA S+ ++E++R++ E+TV+G D+P P+ +F +  FPDYVLQEV   GF +PT IQ QGWPMAL GRD+IGIA TGSGKTL+Y LP+IVH+NAQP L  GDGPIVLVLAPTRELAVQIQ E +KFG SSRI+NTC+YGG PKGPQ+RDL +GVEI IATPGRLIDML++  TNL+RVTYLVLDEADRMLDMGFEPQIRKIV QIRPDRQTL WSATWPKEV+QL R +L +P +V IGS +L A+H I Q V ++ E  K ++LVK LE  ++   ++IL+F  TK+ CD+IT  LR DGWPAL+IHGDK Q ERDWVL EF+ GK+ IM ATDVAARG+DVK + +VINYD PG++EDYVHRIGRTGR GA GTA +FFT  N++   +L  I+ EA Q V PEL    R
Sbjct:   78 QWDLEQLPKFEKNFYSEHPDVAARSDRDIEQFRKENEMTVKGHDIPHPITTFDEAGFPDYVLQEVKDQGFPKPTPIQCQGWPMALSGRDMIGIAATGSGKTLSYCLPSIVHINAQPQLQYGDGPIVLVLAPTRELAVQIQTECSKFGKSSRIRNTCVYGGAPKGPQIRDLARGVEICIATPGRLIDMLEAGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQQLTRDYLNDPIQVTIGSLELAASHTITQLVEVIDEFSKRDRLVKHLESALNEKDNKILVFASTKRTCDEITTYLRSDGWPALAIHGDKEQNERDWVLDEFRKGKTSIMVATDVAARGIDVKGITHVINYDMPGNIEDYVHRIGRTGRGGASGTAISFFTEGNSKLGGDLCKIMREANQTVPPELQRFDR 509          
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy Swiss-Prot
Match: DBP2_CRYNJ (ATP-dependent RNA helicase DBP2-A OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=DBP2 PE=3 SV=1)

HSP 1 Score: 564.688 bits (1454), Expect = 0.000e+0
Identity = 275/424 (64.86%), Postives = 347/424 (81.84%), Query Frame = 1
Query:  370 LTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDI-MDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMG 1638
            L  FEKNFYV+ P V A S+ EVE +R ++E+ ++G++VP+P+ +F +  FPDY++ E+ + GF  P++IQ Q WPMAL GRDL+ IAETGSGKT+++ LPA+VH+NAQP+LAPGDGPIVL+LAPTRELAVQIQ EA KFG SSRI+NT IYGG PKGPQ+RDLQ+GVEI +ATPGRLIDML++  TNL+RVTYLV+DEADRMLDMGFEPQIRKIVSQIRPDRQTL +SATWPKEV++LA  FL++  +V IGS DL ANH + QHV + ++  K +KL+  LE I  +  ++LIF+ TK+  D +T+ LRMDGWPAL+IHGDK QAERDWVL+EFK+G+SPIM ATDVA+RGLDV+D+ YVINYDFP + EDY+HRIGRTGRAG KGT+YT+FT  N++ A+EL+ IL E+   + PEL  M 
Sbjct:   67 LAKFEKNFYVQDPRVTARSDAEVEAFRAEKEMKIQGKNVPRPITTFEEAGFPDYIMSEIRRMGFTAPSSIQCQAWPMALSGRDLVAIAETGSGKTISFCLPAMVHINAQPLLAPGDGPIVLILAPTRELAVQIQTEATKFGQSSRIRNTAIYGGAPKGPQIRDLQRGVEICVATPGRLIDMLETGKTNLKRVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLLFSATWPKEVQRLAMDFLHDFIQVNIGSLDLTANHNVAQHVEVCTDFDKRSKLLSHLEKISQENGKVLIFVATKRVADDLTKFLRMDGWPALAIHGDKQQAERDWVLAEFKSGRSPIMLATDVASRGLDVRDIGYVINYDFPNNCEDYIHRIGRTGRAGRKGTSYTYFTMDNSKAARELVQILRESKADIPPELEEMA 490          
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy Swiss-Prot
Match: DBP2_CRYNB (ATP-dependent RNA helicase DBP2-A OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=DBP2 PE=3 SV=1)

HSP 1 Score: 564.688 bits (1454), Expect = 0.000e+0
Identity = 275/424 (64.86%), Postives = 347/424 (81.84%), Query Frame = 1
Query:  370 LTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDI-MDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMG 1638
            L  FEKNFYV+ P V A S+ EVE +R ++E+ ++G++VP+P+ +F +  FPDY++ E+ + GF  P++IQ Q WPMAL GRDL+ IAETGSGKT+++ LPA+VH+NAQP+LAPGDGPIVL+LAPTRELAVQIQ EA KFG SSRI+NT IYGG PKGPQ+RDLQ+GVEI +ATPGRLIDML++  TNL+RVTYLV+DEADRMLDMGFEPQIRKIVSQIRPDRQTL +SATWPKEV++LA  FL++  +V IGS DL ANH + QHV + ++  K +KL+  LE I  +  ++LIF+ TK+  D +T+ LRMDGWPAL+IHGDK QAERDWVL+EFK+G+SPIM ATDVA+RGLDV+D+ YVINYDFP + EDY+HRIGRTGRAG KGT+YT+FT  N++ A+EL+ IL E+   + PEL  M 
Sbjct:   67 LAKFEKNFYVQDPRVTARSDAEVEAFRAEKEMKIQGKNVPRPITTFEEAGFPDYIMSEIRRMGFTAPSSIQCQAWPMALSGRDLVAIAETGSGKTISFCLPAMVHINAQPLLAPGDGPIVLILAPTRELAVQIQTEATKFGQSSRIRNTAIYGGAPKGPQIRDLQRGVEICVATPGRLIDMLETGKTNLKRVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLLFSATWPKEVQRLAMDFLHDFIQVNIGSLDLTANHNVAQHVEVCTDFDKRSKLLSHLEKISQENGKVLIFVATKRVADDLTKFLRMDGWPALAIHGDKQQAERDWVLAEFKSGRSPIMLATDVASRGLDVRDIGYVINYDFPNNCEDYIHRIGRTGRAGRKGTSYTYFTMDNSKAARELVQILRESKADIPPELEEMA 490          
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy Swiss-Prot
Match: DBP2_GIBZE (ATP-dependent RNA helicase DBP2 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=DBP2 PE=3 SV=1)

HSP 1 Score: 561.992 bits (1447), Expect = 0.000e+0
Identity = 279/436 (63.99%), Postives = 349/436 (80.05%), Query Frame = 1
Query:  334 AGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDG--SRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAM 1635
            +G   ++ D++ L  FEK+FY E P V   S+ +VE +R+K ++T+ G +VPKPV++F +  FP YV+ EV   GF  PTAIQ+QGWPMAL GRD++GIAETGSGKTL Y LP+IVH+NAQP+LAPGDGPIVLVLAPTRELAVQIQ+E  KFG SSRI+NTC+YGGVPKGPQ+RDL +GVE+ IATPGRLIDML++  TNLRRVTYLVLDEADRMLDMGFEPQIRKI+ QIRPDRQTL WSATWPKEV  LA  FL +  +V IGS +L ANH I Q V +V+E +K ++++K +E +M+   ++ILIF+ TK+  D+ITR LR DGWPALSIHGDK Q ERDWVL +FK GKSPIM ATDVA+RG+DV+++ +V+NYD+P + EDY+HRIGRTGRAGA GTA T FT  N + A++L+ +L+EA Q++ P L  M
Sbjct:   79 SGLKNQEWDINSLPKFEKSFYKEHPDVETRSDADVEAFRRKHQMTIAGSNVPKPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPSIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQEEMKKFGRSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTLMWSATWPKEVRALASDFLQDFIQVNIGSMELAANHRITQIVEVVTEMEKRDRMIKHMEKVMENKENKILIFVGTKRVADEITRFLRQDGWPALSIHGDKQQNERDWVLDQFKTGKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRAGAMGTAITLFTTDNQKQARDLVNVLQEAKQQIDPRLVEM 514          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
V7AQF3_PHAVU0.000e+086.19Uncharacterized protein OS=Phaseolus vulgaris GN=P... [more]
M5XBL9_PRUPE0.000e+089.51Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
A2Q465_MEDTR0.000e+086.14DEAD-box ATP-dependent RNA helicase OS=Medicago tr... [more]
I3SPD5_MEDTR0.000e+085.74Uncharacterized protein OS=Medicago truncatula PE=... [more]
D7KM60_ARALL0.000e+086.23Putative uncharacterized protein OS=Arabidopsis ly... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
DBP2_CANGA0.000e+060.32ATP-dependent RNA helicase DBP2 OS=Candida glabrat... [more]
DBP2_CANAL0.000e+065.28ATP-dependent RNA helicase DBP2 OS=Candida albican... [more]
DBP2_CRYNJ0.000e+064.86ATP-dependent RNA helicase DBP2-A OS=Cryptococcus ... [more]
DBP2_CRYNB0.000e+064.86ATP-dependent RNA helicase DBP2-A OS=Cryptococcus ... [more]
DBP2_GIBZE0.000e+063.99ATP-dependent RNA helicase DBP2 OS=Gibberella zeae... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 118..321
e-value: 2.4E-68
score: 243.0
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 130..305
score: 33.408
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 358..439
e-value: 4.8E-34
score: 129.1
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 330..439
e-value: 1.5E-29
score: 102.4
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 333..478
score: 23.963
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 321..476
e-value: 9.9E-60
score: 200.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 80..320
e-value: 2.3E-91
score: 304.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 171..454
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 123..294
e-value: 4.2E-49
score: 166.5
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 7..477
NoneNo IPR availablePANTHERPTHR24031:SF219ATP-DEPENDENT RNA HELICASE DDX5-RELATEDcoord: 7..477
IPR000629ATP-dependent RNA helicase DEAD-box, conserved sitePROSITEPS00039DEAD_ATP_HELICASEcoord: 251..259
IPR014014RNA helicase, DEAD-box type, Q motifPROSITEPS51195Q_MOTIFcoord: 99..127
score: 10.209

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0013834 ID=g.arboreum_cottongen_reftransV1_0013834; Name=g.arboreum_cottongen_reftransV1_0013834; organism=Gossypium arboreum; type=contig; length=1987bp
GGAAAATTTTTCCCTTTCTCTTAACTTCTTTTCCTCCCAATTGAAACCAA
AAAGGAGAGGGACAAAGCTCCATCGAGTAAAACCCTGACACATAAAAACC
CTAATTAATTAGAACAAGGCCAAACGATAACACGAATTCTTTTTTTCGGT
TACATTGACATTTATATTAACTTTTGATCATTTCTACGGACAGCAGCACA
TAAAATGAGTAGATATGATAGCCGCTCCGGCGATCCTGCCTCCTACCGTG
ACCGTAGAAGTGACTCAGGGTTTGGTGGGGCTTCAGCATATGGTGGTTCA
GGGCGGTCCTTGTCAAGCAGAAAGGACTATGATGCTGGTGAACCACCTAG
GAAGTTGGATTTGGATGGCTTGACACCATTTGAAAAGAATTTTTATGTTG
AGTCTCCTTCTGTGGCAGCAATGTCTGAGATGGAGGTGGAGGAATATCGA
CAGAAGAGGGAAATTACGGTTGAAGGTCGTGATGTTCCAAAGCCTGTGAA
GAGTTTTGCTGATGTGAGATTTCCAGACTATGTACTGCAAGAAGTCATGA
AAGCAGGGTTTGTTGAACCAACAGCCATACAAGCTCAAGGCTGGCCAATG
GCTTTAAAGGGCCGTGATCTTATTGGTATTGCTGAAACAGGATCAGGGAA
GACCCTTGCCTATTTATTGCCTGCAATTGTTCACGTCAACGCACAACCAA
TTTTAGCTCCTGGAGATGGTCCAATTGTATTAGTATTAGCTCCCACACGT
GAACTTGCAGTTCAAATACAACAGGAGGCTGCTAAGTTTGGTGCGTCATC
AAGGATCAAGAATACATGCATATATGGTGGGGTTCCAAAGGGACCTCAAG
TGCGTGATCTCCAGAAAGGTGTTGAGATTGTTATTGCTACACCAGGAAGG
TTAATAGATATGTTGGATTCACATCACACAAATCTGCGAAGAGTTACTTA
TTTAGTCTTGGATGAGGCAGATCGGATGTTAGACATGGGGTTTGAGCCTC
AGATACGAAAAATTGTTTCTCAGATACGTCCTGATCGTCAAACTTTATAC
TGGAGTGCAACTTGGCCAAAGGAGGTTGAACAATTGGCAAGGCAGTTTCT
TTACAATCCGTACAAAGTGATAATTGGATCTGCGGATTTAAAAGCTAACC
ATGCAATTCGCCAACATGTTAACATTGTTTCAGAGAGTCAGAAATATAAC
AAATTGGTGAAGCTGCTCGAGGATATCATGGATGGCAGCAGAATTTTGAT
TTTCATGGATACCAAGAAGGGTTGTGACCAAATCACTAGGCAACTTCGCA
TGGATGGTTGGCCTGCTCTGTCAATTCATGGAGATAAAAGTCAAGCAGAA
AGGGATTGGGTCCTTTCAGAGTTTAAAGCTGGCAAGAGCCCTATAATGAC
TGCAACAGATGTTGCAGCTCGTGGTTTAGATGTGAAAGATGTGAAGTATG
TAATCAATTATGACTTCCCGGGATCTCTCGAGGATTATGTCCATCGCATT
GGTCGAACAGGGAGGGCTGGGGCAAAAGGAACAGCCTATACTTTCTTCAC
AGCTGCAAATGCAAGATTTGCCAAAGAACTTATTGCCATACTTGAGGAAG
CTGGCCAGAAGGTCAGTCCTGAATTGGCAGCAATGGGACGCGGTGCACCT
CCTCCCCCATCAGGTCATGGTGGTTTTCGAGACCGAGGTAAGGGATACAG
TGGCGGTCGCACATGGAGCTGATTAACAGAAAGATCCCTGTTCCCCAGAA
GAGGAAAATTAGAAAGACTATGAGGGTACAGTGTAGTGTAGACATACTTT
GTTTAACTGTCACTACCCGCAGGAAGGGCAAGTAGATGGGGAACTTGTAA
ATTGACAGTGTATGTACTCCCAGATTAAAAGTCCGATTCCCCCTTAAGCA
ATGAGAACTCAACTCGTGAATGAAAAACAAAACAAAAATGAGTTGCATTT
TTCCACTTCATTCCAAAGCTGATCATGTTTTTTTTTT
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR001650Helicase_C-like
IPR027417P-loop_NTPase
IPR011545DEAD/DEAH_box_helicase_dom
IPR000629RNA-helicase_DEAD-box_CS
IPR014014RNA_helicase_DEAD_Q_motif
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005524ATP binding