g.arboreum_cottongen_reftransV1_0013834, g.arboreum_cottongen_reftransV1_0013834 (contig) Gossypium arboreum
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy TrEMBL
Match: V7AQF3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G139400g PE=3 SV=1) HSP 1 Score: 839.336 bits (2167), Expect = 0.000e+0 Identity = 437/507 (86.19%), Postives = 464/507 (91.52%), Query Frame = 1 Query: 205 MSRYDSRSGDPASYRDRRXXXXXXXXXXXX--XXXXXXXXRKDYDAGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGKGYSGGRTWS 1719 MSRYDSRS DP SYRDRRSDSG G ++ +G S + R D G P R L LDGL FEKNFY+ESP+V AM++ EV EYRQ+REITVEGRD+PKPVK+F D FP+YVLQE+ KAGF EPT IQ+QGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPIL PGDGPIVLVLAPTRELAVQIQQEA KFGASSRIK+TCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDML+S+HTNL+RVTYLVLDEADRMLDMGF+PQ+RKIVSQIRPDRQTLYWSATWPKEVEQLAR+FLYNPYKVIIGS DLKANHAIRQ+V+IVSE QKY+KLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFK+GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPP PSG GF+DRG+GY R WS Sbjct: 1 MSRYDSRSSDPTSYRDRRSDSGLGASTGFGGPVQHSSSNKRDHDDGGSPKRNLSLDGLPHFEKNFYIESPAVRAMTDAEVNEYRQQREITVEGRDIPKPVKTFQDAGFPEYVLQEITKAGFTEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQEATKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESNHTNLQRVTYLVLDEADRMLDMGFDPQLRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYNPYKVIIGSEDLKANHAIRQYVDIVSEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPLPSGPRGFQDRGRGYGSSRPWS 507
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy TrEMBL
Match: M5XBL9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004545mg PE=3 SV=1) HSP 1 Score: 837.025 bits (2161), Expect = 0.000e+0 Identity = 435/486 (89.51%), Postives = 458/486 (94.24%), Query Frame = 1 Query: 205 MSRYDSRSGDPASYRDRRXXXXXXXXXXXXXXXXXXXXRKDYDAGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPS 1662 MSRYDSRSGDP SYRDR+SDSGFG G + S S +KD D E PRK DLDGLTPFEKNFYVESP V MSE EVE+YRQ+REIT+EGRDVPKP+KSF D FP+YVL+EV KAGFVEPT IQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPIL+PGDGPIVLVLAPTRELAVQIQQEA KFG+SS+IK+TCIYGGVPKGPQVRDLQ+GVEIVIATPGRLIDM++SHHTNLRRVTYLVLDEADRMLDMGF+PQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGS DLKANHAIRQ V+I++E+QKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVK+VINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIA+LEEAGQKVSPELAAMGRGAPPPPS Sbjct: 1 MSRYDSRSGDPTSYRDRKSDSGFGVTGYGGSARSSSS-KKDCDGAESPRKFDLDGLTPFEKNFYVESPEVERMSEKEVEDYRQRREITIEGRDVPKPIKSFRDTGFPEYVLEEVTKAGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEATKFGSSSKIKSTCIYGGVPKGPQVRDLQRGVEIVIATPGRLIDMIESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSPDLKANHAIRQIVDIITENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKFVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIALLEEAGQKVSPELAAMGRGAPPPPS 485
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy TrEMBL
Match: A2Q465_MEDTR (DEAD-box ATP-dependent RNA helicase OS=Medicago truncatula GN=MTR_2g100230 PE=3 SV=1) HSP 1 Score: 835.869 bits (2158), Expect = 0.000e+0 Identity = 435/505 (86.14%), Postives = 459/505 (90.89%), Query Frame = 1 Query: 205 MSRYDSRSGDPASYRDRRXXXXXXXXXXXXXXXXXXXXRKDYDAGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGKGYSGGRTWS 1719 MSRYDSRS DP SYRDRRSDSG S + + + P RK++LDGL FEKNFY ESPSV AM+E EV EYR +REITVEG+DVPKPVKSF+D FPDYVL+EV KAGFVEPT IQ+QGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPIL PGDGPIVLVLAPTRELAVQIQQEA KFGASSRIK+TCIYGGVPKGPQVRDLQKGVEI+IATPGRLIDML+S+HTNLRRVTYLVLDEADRMLDMGF+PQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGS DLKANHAI+Q+V+IV E QKY+KLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFK+GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELI+ILEEAGQ+VS ELAAMGRGAPPPPS GGFRDRGK + GR WS Sbjct: 1 MSRYDSRSSDPTSYRDRRSDSGLAAPSPSPSPSI----KNEGASASPARKINLDGLPHFEKNFYSESPSVRAMTEAEVTEYRLRREITVEGKDVPKPVKSFSDAAFPDYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQEATKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIIIATPGRLIDMLESNHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELISILEEAGQRVSSELAAMGRGAPPPPS--GGFRDRGKSFGSGRPWS 499
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy TrEMBL
Match: I3SPD5_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 833.558 bits (2152), Expect = 0.000e+0 Identity = 433/505 (85.74%), Postives = 458/505 (90.69%), Query Frame = 1 Query: 205 MSRYDSRSGDPASYRDRRXXXXXXXXXXXXXXXXXXXXRKDYDAGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGKGYSGGRTWS 1719 MSRYDSRS DP SYRDRRSDSG S + + + P RK++LDGL FEKNFY ESPSV AM+E EV EYR +REITVEG+DVPKPVKSF+D FPDYVL+EV KAGFVEPT IQ+QGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPIL PGDGPIVLVLAPTRELAVQIQQEA KFGASSRIK+TCIYGGVPKGPQVRDLQKGVEI+IATPGRLIDML+S+HTNLRRVTYLVLDEADRMLDMGF+PQIRKIV QIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGS DLKANHAI+Q+V+IV E QKY+KLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFK+GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIG+TGRAGAKGTAYTFFTAANARFAKELI+ILEEAGQ+VS ELAAMGRGAPPPPS GGFRDRGK + GR WS Sbjct: 1 MSRYDSRSSDPTSYRDRRSDSGLAAPSPSPSPSI----KNEGASASPARKINLDGLPHFEKNFYSESPSVRAMTEAEVTEYRLRREITVEGKDVPKPVKSFSDAAFPDYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQEATKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIIIATPGRLIDMLESNHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVPQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGKTGRAGAKGTAYTFFTAANARFAKELISILEEAGQRVSSELAAMGRGAPPPPS--GGFRDRGKSFGSGRPWS 499
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy TrEMBL
Match: D7KM60_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_474570 PE=3 SV=1) HSP 1 Score: 828.935 bits (2140), Expect = 0.000e+0 Identity = 432/501 (86.23%), Postives = 470/501 (93.81%), Query Frame = 1 Query: 205 MSRYDSRSGDPASYRDRRXXXXXXXXXXXXXXXXXXXXRKDYDAGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRG--KGYS 1701 MSRYDSR+GD S+RDRRSDSGFGG SAYG SG SS+KD D E PRKLDLDGLTPFEKNFYVESP+VAAM++ EVEEYR+ REITVEG+D+PKPVKSF DV FPDYVL+E+ KAGF EPT IQ+QGWPMA+KGRDLIGIAETGSGKT++YLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEA+KFG+SS+IK+TCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM++S++TNLRRVTYLVLDEADRMLDMGF+PQIRKIVS IRPDRQTLYWSATWPKEVEQL+++FLYNPYKVIIGS+DLKAN AIRQ V+++SESQKYNKLVKLLEDIMDGSRIL+F+DTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEF++GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFT ANARFAKEL ILEEAGQKVSPELA+MGR PPP G GGFRDRG +G+S Sbjct: 1 MSRYDSRTGDSTSFRDRRSDSGFGGTSAYGSSGSHSSSKKDNDGNESPRKLDLDGLTPFEKNFYVESPTVAAMTDTEVEEYRKLREITVEGKDIPKPVKSFRDVGFPDYVLEEIKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTISYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEASKFGSSSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESNNTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHIRPDRQTLYWSATWPKEVEQLSKKFLYNPYKVIIGSSDLKANRAIRQIVDVISESQKYNKLVKLLEDIMDGSRILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTVANARFAKELSNILEEAGQKVSPELASMGRSTAPPPPGLGGFRDRGSRRGWS 501
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy Swiss-Prot
Match: DBP2_CANGA (ATP-dependent RNA helicase DBP2 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=DBP2 PE=3 SV=1) HSP 1 Score: 567.385 bits (1461), Expect = 0.000e+0 Identity = 298/494 (60.32%), Postives = 363/494 (73.48%), Query Frame = 1 Query: 187 RTAAHKMSRYDSRSGDPASYRDRRXXXXXXXXXXXXXXXXXXXXRKDYDAGEPPRKL-------DLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDG--SRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGR 1641 R A + + Y+SR GD +R RS R +D G PR+L +L L PFEKNFYVE V S+ EV ++R++ E+T+ G D+PKP+ +F + FPDYVL+EV GF +PT+IQ QGWPMAL GRD++GIA TGSGKTL+Y LP IVH+NAQP+L+PGDGPIVLVLAPTRELAVQIQ+E +KFG SSRI+NTC+YGGVP+G Q+R+L +G EIVIATPGRLIDML++ TNL+RVTYLVLDEADRMLDMGFEPQIRKIV QIRPDRQTL WSATWPKEV+QLAR +L +P +V IGS +L A+H I Q V +VSE +K ++LVK L+ S+ILIF TK+ CD+IT LR DGWPAL+IHGDK Q ERDWVL+EF+ G SPIM ATDVAARG+DVK + +V+NYD PG++EDYVHRIGRTGRAGA GTA +FFT N LI+I+ EA Q + EL R Sbjct: 4 RDALYNKTNYNSRGGD---FRGGRSSDRNDYNRDRNQGYSHGGLRGRHDDG--PRELIKPDWESELPNLPPFEKNFYVEHEVVRNRSDQEVAQFRKESEMTITGHDIPKPITTFDEAGFPDYVLKEVKAEGFDKPTSIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLSPGDGPIVLVLAPTRELAVQIQKECSKFGKSSRIRNTCVYGGVPRGQQIRELIRGAEIVIATPGRLIDMLEAGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQQLARDYLNDPIQVQIGSLELAASHNITQLVEVVSEFEKRDRLVKHLDTASQDKESKILIFASTKRTCDEITSYLRQDGWPALAIHGDKDQRERDWVLNEFRTGNSPIMVATDVAARGIDVKGINFVVNYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEDNKSLGASLISIMREAKQNIPEELMKYDR 492
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy Swiss-Prot
Match: DBP2_CANAL (ATP-dependent RNA helicase DBP2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=DBP2 PE=3 SV=2) HSP 1 Score: 567.385 bits (1461), Expect = 0.000e+0 Identity = 282/432 (65.28%), Postives = 340/432 (78.70%), Query Frame = 1 Query: 352 KLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMD--GSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGR 1641 + DL+ L FEKNFY E P VAA S+ ++E++R++ E+TV+G D+P P+ +F + FPDYVLQEV GF +PT IQ QGWPMAL GRD+IGIA TGSGKTL+Y LP+IVH+NAQP L GDGPIVLVLAPTRELAVQIQ E +KFG SSRI+NTC+YGG PKGPQ+RDL +GVEI IATPGRLIDML++ TNL+RVTYLVLDEADRMLDMGFEPQIRKIV QIRPDRQTL WSATWPKEV+QL R +L +P +V IGS +L A+H I Q V ++ E K ++LVK LE ++ ++IL+F TK+ CD+IT LR DGWPAL+IHGDK Q ERDWVL EF+ GK+ IM ATDVAARG+DVK + +VINYD PG++EDYVHRIGRTGR GA GTA +FFT N++ +L I+ EA Q V PEL R Sbjct: 78 QWDLEQLPKFEKNFYSEHPDVAARSDRDIEQFRKENEMTVKGHDIPHPITTFDEAGFPDYVLQEVKDQGFPKPTPIQCQGWPMALSGRDMIGIAATGSGKTLSYCLPSIVHINAQPQLQYGDGPIVLVLAPTRELAVQIQTECSKFGKSSRIRNTCVYGGAPKGPQIRDLARGVEICIATPGRLIDMLEAGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQQLTRDYLNDPIQVTIGSLELAASHTITQLVEVIDEFSKRDRLVKHLESALNEKDNKILVFASTKRTCDEITTYLRSDGWPALAIHGDKEQNERDWVLDEFRKGKTSIMVATDVAARGIDVKGITHVINYDMPGNIEDYVHRIGRTGRGGASGTAISFFTEGNSKLGGDLCKIMREANQTVPPELQRFDR 509
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy Swiss-Prot
Match: DBP2_CRYNJ (ATP-dependent RNA helicase DBP2-A OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=DBP2 PE=3 SV=1) HSP 1 Score: 564.688 bits (1454), Expect = 0.000e+0 Identity = 275/424 (64.86%), Postives = 347/424 (81.84%), Query Frame = 1 Query: 370 LTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDI-MDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMG 1638 L FEKNFYV+ P V A S+ EVE +R ++E+ ++G++VP+P+ +F + FPDY++ E+ + GF P++IQ Q WPMAL GRDL+ IAETGSGKT+++ LPA+VH+NAQP+LAPGDGPIVL+LAPTRELAVQIQ EA KFG SSRI+NT IYGG PKGPQ+RDLQ+GVEI +ATPGRLIDML++ TNL+RVTYLV+DEADRMLDMGFEPQIRKIVSQIRPDRQTL +SATWPKEV++LA FL++ +V IGS DL ANH + QHV + ++ K +KL+ LE I + ++LIF+ TK+ D +T+ LRMDGWPAL+IHGDK QAERDWVL+EFK+G+SPIM ATDVA+RGLDV+D+ YVINYDFP + EDY+HRIGRTGRAG KGT+YT+FT N++ A+EL+ IL E+ + PEL M Sbjct: 67 LAKFEKNFYVQDPRVTARSDAEVEAFRAEKEMKIQGKNVPRPITTFEEAGFPDYIMSEIRRMGFTAPSSIQCQAWPMALSGRDLVAIAETGSGKTISFCLPAMVHINAQPLLAPGDGPIVLILAPTRELAVQIQTEATKFGQSSRIRNTAIYGGAPKGPQIRDLQRGVEICVATPGRLIDMLETGKTNLKRVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLLFSATWPKEVQRLAMDFLHDFIQVNIGSLDLTANHNVAQHVEVCTDFDKRSKLLSHLEKISQENGKVLIFVATKRVADDLTKFLRMDGWPALAIHGDKQQAERDWVLAEFKSGRSPIMLATDVASRGLDVRDIGYVINYDFPNNCEDYIHRIGRTGRAGRKGTSYTYFTMDNSKAARELVQILRESKADIPPELEEMA 490
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy Swiss-Prot
Match: DBP2_CRYNB (ATP-dependent RNA helicase DBP2-A OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=DBP2 PE=3 SV=1) HSP 1 Score: 564.688 bits (1454), Expect = 0.000e+0 Identity = 275/424 (64.86%), Postives = 347/424 (81.84%), Query Frame = 1 Query: 370 LTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDI-MDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMG 1638 L FEKNFYV+ P V A S+ EVE +R ++E+ ++G++VP+P+ +F + FPDY++ E+ + GF P++IQ Q WPMAL GRDL+ IAETGSGKT+++ LPA+VH+NAQP+LAPGDGPIVL+LAPTRELAVQIQ EA KFG SSRI+NT IYGG PKGPQ+RDLQ+GVEI +ATPGRLIDML++ TNL+RVTYLV+DEADRMLDMGFEPQIRKIVSQIRPDRQTL +SATWPKEV++LA FL++ +V IGS DL ANH + QHV + ++ K +KL+ LE I + ++LIF+ TK+ D +T+ LRMDGWPAL+IHGDK QAERDWVL+EFK+G+SPIM ATDVA+RGLDV+D+ YVINYDFP + EDY+HRIGRTGRAG KGT+YT+FT N++ A+EL+ IL E+ + PEL M Sbjct: 67 LAKFEKNFYVQDPRVTARSDAEVEAFRAEKEMKIQGKNVPRPITTFEEAGFPDYIMSEIRRMGFTAPSSIQCQAWPMALSGRDLVAIAETGSGKTISFCLPAMVHINAQPLLAPGDGPIVLILAPTRELAVQIQTEATKFGQSSRIRNTAIYGGAPKGPQIRDLQRGVEICVATPGRLIDMLETGKTNLKRVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLLFSATWPKEVQRLAMDFLHDFIQVNIGSLDLTANHNVAQHVEVCTDFDKRSKLLSHLEKISQENGKVLIFVATKRVADDLTKFLRMDGWPALAIHGDKQQAERDWVLAEFKSGRSPIMLATDVASRGLDVRDIGYVINYDFPNNCEDYIHRIGRTGRAGRKGTSYTYFTMDNSKAARELVQILRESKADIPPELEEMA 490
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy Swiss-Prot
Match: DBP2_GIBZE (ATP-dependent RNA helicase DBP2 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=DBP2 PE=3 SV=1) HSP 1 Score: 561.992 bits (1447), Expect = 0.000e+0 Identity = 279/436 (63.99%), Postives = 349/436 (80.05%), Query Frame = 1 Query: 334 AGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDG--SRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAM 1635 +G ++ D++ L FEK+FY E P V S+ +VE +R+K ++T+ G +VPKPV++F + FP YV+ EV GF PTAIQ+QGWPMAL GRD++GIAETGSGKTL Y LP+IVH+NAQP+LAPGDGPIVLVLAPTRELAVQIQ+E KFG SSRI+NTC+YGGVPKGPQ+RDL +GVE+ IATPGRLIDML++ TNLRRVTYLVLDEADRMLDMGFEPQIRKI+ QIRPDRQTL WSATWPKEV LA FL + +V IGS +L ANH I Q V +V+E +K ++++K +E +M+ ++ILIF+ TK+ D+ITR LR DGWPALSIHGDK Q ERDWVL +FK GKSPIM ATDVA+RG+DV+++ +V+NYD+P + EDY+HRIGRTGRAGA GTA T FT N + A++L+ +L+EA Q++ P L M Sbjct: 79 SGLKNQEWDINSLPKFEKSFYKEHPDVETRSDADVEAFRRKHQMTIAGSNVPKPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPSIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQEEMKKFGRSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTLMWSATWPKEVRALASDFLQDFIQVNIGSMELAANHRITQIVEVVTEMEKRDRMIKHMEKVMENKENKILIFVGTKRVADEITRFLRQDGWPALSIHGDKQQNERDWVLDQFKTGKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRAGAMGTAITLFTTDNQKQARDLVNVLQEAKQQIDPRLVEM 514 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0013834 ID=g.arboreum_cottongen_reftransV1_0013834; Name=g.arboreum_cottongen_reftransV1_0013834; organism=Gossypium arboreum; type=contig; length=1987bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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