g.arboreum_cottongen_reftransV1_0013834, g.arboreum_cottongen_reftransV1_0013834 (contig) Gossypium arboreum
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy TrEMBL
Match: V7AQF3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G139400g PE=3 SV=1) HSP 1 Score: 839.336 bits (2167), Expect = 0.000e+0 Identity = 437/507 (86.19%), Postives = 464/507 (91.52%), Query Frame = 1 Query: 205 MSRYDSRSGDPASYRDRRXXXXXXXXXXXX--XXXXXXXXRKDYDAGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGKGYSGGRTWS 1719 MSRYDSRS DP SYRDRRSDSG G ++ +G S + R D G P R L LDGL FEKNFY+ESP+V AM++ EV EYRQ+REITVEGRD+PKPVK+F D FP+YVLQE+ KAGF EPT IQ+QGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPIL PGDGPIVLVLAPTRELAVQIQQEA KFGASSRIK+TCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDML+S+HTNL+RVTYLVLDEADRMLDMGF+PQ+RKIVSQIRPDRQTLYWSATWPKEVEQLAR+FLYNPYKVIIGS DLKANHAIRQ+V+IVSE QKY+KLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFK+GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPP PSG GF+DRG+GY R WS Sbjct: 1 MSRYDSRSSDPTSYRDRRSDSGLGASTGFGGPVQHSSSNKRDHDDGGSPKRNLSLDGLPHFEKNFYIESPAVRAMTDAEVNEYRQQREITVEGRDIPKPVKTFQDAGFPEYVLQEITKAGFTEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQEATKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESNHTNLQRVTYLVLDEADRMLDMGFDPQLRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYNPYKVIIGSEDLKANHAIRQYVDIVSEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPLPSGPRGFQDRGRGYGSSRPWS 507
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy TrEMBL
Match: M5XBL9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004545mg PE=3 SV=1) HSP 1 Score: 837.025 bits (2161), Expect = 0.000e+0 Identity = 435/486 (89.51%), Postives = 458/486 (94.24%), Query Frame = 1 Query: 205 MSRYDSRSGDPASYRDRRXXXXXXXXXXXXXXXXXXXXRKDYDAGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPS 1662 MSRYDSRSGDP SYRDR+SDSGFG G + S S +KD D E PRK DLDGLTPFEKNFYVESP V MSE EVE+YRQ+REIT+EGRDVPKP+KSF D FP+YVL+EV KAGFVEPT IQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPIL+PGDGPIVLVLAPTRELAVQIQQEA KFG+SS+IK+TCIYGGVPKGPQVRDLQ+GVEIVIATPGRLIDM++SHHTNLRRVTYLVLDEADRMLDMGF+PQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGS DLKANHAIRQ V+I++E+QKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVK+VINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIA+LEEAGQKVSPELAAMGRGAPPPPS Sbjct: 1 MSRYDSRSGDPTSYRDRKSDSGFGVTGYGGSARSSSS-KKDCDGAESPRKFDLDGLTPFEKNFYVESPEVERMSEKEVEDYRQRREITIEGRDVPKPIKSFRDTGFPEYVLEEVTKAGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEATKFGSSSKIKSTCIYGGVPKGPQVRDLQRGVEIVIATPGRLIDMIESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSPDLKANHAIRQIVDIITENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKFVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIALLEEAGQKVSPELAAMGRGAPPPPS 485
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy TrEMBL
Match: A2Q465_MEDTR (DEAD-box ATP-dependent RNA helicase OS=Medicago truncatula GN=MTR_2g100230 PE=3 SV=1) HSP 1 Score: 835.869 bits (2158), Expect = 0.000e+0 Identity = 435/505 (86.14%), Postives = 459/505 (90.89%), Query Frame = 1 Query: 205 MSRYDSRSGDPASYRDRRXXXXXXXXXXXXXXXXXXXXRKDYDAGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGKGYSGGRTWS 1719 MSRYDSRS DP SYRDRRSDSG S + + + P RK++LDGL FEKNFY ESPSV AM+E EV EYR +REITVEG+DVPKPVKSF+D FPDYVL+EV KAGFVEPT IQ+QGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPIL PGDGPIVLVLAPTRELAVQIQQEA KFGASSRIK+TCIYGGVPKGPQVRDLQKGVEI+IATPGRLIDML+S+HTNLRRVTYLVLDEADRMLDMGF+PQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGS DLKANHAI+Q+V+IV E QKY+KLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFK+GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELI+ILEEAGQ+VS ELAAMGRGAPPPPS GGFRDRGK + GR WS Sbjct: 1 MSRYDSRSSDPTSYRDRRSDSGLAAPSPSPSPSI----KNEGASASPARKINLDGLPHFEKNFYSESPSVRAMTEAEVTEYRLRREITVEGKDVPKPVKSFSDAAFPDYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQEATKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIIIATPGRLIDMLESNHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELISILEEAGQRVSSELAAMGRGAPPPPS--GGFRDRGKSFGSGRPWS 499
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy TrEMBL
Match: I3SPD5_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 833.558 bits (2152), Expect = 0.000e+0 Identity = 433/505 (85.74%), Postives = 458/505 (90.69%), Query Frame = 1 Query: 205 MSRYDSRSGDPASYRDRRXXXXXXXXXXXXXXXXXXXXRKDYDAGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGKGYSGGRTWS 1719 MSRYDSRS DP SYRDRRSDSG S + + + P RK++LDGL FEKNFY ESPSV AM+E EV EYR +REITVEG+DVPKPVKSF+D FPDYVL+EV KAGFVEPT IQ+QGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPIL PGDGPIVLVLAPTRELAVQIQQEA KFGASSRIK+TCIYGGVPKGPQVRDLQKGVEI+IATPGRLIDML+S+HTNLRRVTYLVLDEADRMLDMGF+PQIRKIV QIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGS DLKANHAI+Q+V+IV E QKY+KLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFK+GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIG+TGRAGAKGTAYTFFTAANARFAKELI+ILEEAGQ+VS ELAAMGRGAPPPPS GGFRDRGK + GR WS Sbjct: 1 MSRYDSRSSDPTSYRDRRSDSGLAAPSPSPSPSI----KNEGASASPARKINLDGLPHFEKNFYSESPSVRAMTEAEVTEYRLRREITVEGKDVPKPVKSFSDAAFPDYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQEATKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIIIATPGRLIDMLESNHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVPQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGKTGRAGAKGTAYTFFTAANARFAKELISILEEAGQRVSSELAAMGRGAPPPPS--GGFRDRGKSFGSGRPWS 499
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy TrEMBL
Match: D7KM60_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_474570 PE=3 SV=1) HSP 1 Score: 828.935 bits (2140), Expect = 0.000e+0 Identity = 432/501 (86.23%), Postives = 470/501 (93.81%), Query Frame = 1 Query: 205 MSRYDSRSGDPASYRDRRXXXXXXXXXXXXXXXXXXXXRKDYDAGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRG--KGYS 1701 MSRYDSR+GD S+RDRRSDSGFGG SAYG SG SS+KD D E PRKLDLDGLTPFEKNFYVESP+VAAM++ EVEEYR+ REITVEG+D+PKPVKSF DV FPDYVL+E+ KAGF EPT IQ+QGWPMA+KGRDLIGIAETGSGKT++YLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEA+KFG+SS+IK+TCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM++S++TNLRRVTYLVLDEADRMLDMGF+PQIRKIVS IRPDRQTLYWSATWPKEVEQL+++FLYNPYKVIIGS+DLKAN AIRQ V+++SESQKYNKLVKLLEDIMDGSRIL+F+DTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEF++GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFT ANARFAKEL ILEEAGQKVSPELA+MGR PPP G GGFRDRG +G+S Sbjct: 1 MSRYDSRTGDSTSFRDRRSDSGFGGTSAYGSSGSHSSSKKDNDGNESPRKLDLDGLTPFEKNFYVESPTVAAMTDTEVEEYRKLREITVEGKDIPKPVKSFRDVGFPDYVLEEIKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTISYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEASKFGSSSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESNNTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHIRPDRQTLYWSATWPKEVEQLSKKFLYNPYKVIIGSSDLKANRAIRQIVDVISESQKYNKLVKLLEDIMDGSRILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTVANARFAKELSNILEEAGQKVSPELASMGRSTAPPPPGLGGFRDRGSRRGWS 501
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy Swiss-Prot
Match: DBP2_AJECN (ATP-dependent RNA helicase DBP2 OS=Ajellomyces capsulatus (strain NAm1 / WU24) GN=DBP2 PE=3 SV=1) HSP 1 Score: 584.719 bits (1506), Expect = 0.000e+0 Identity = 296/439 (67.43%), Postives = 354/439 (80.64%), Query Frame = 1 Query: 334 AGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDG---SRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGR 1641 AG + DL + FEK+FY E P+V+ S EV+ +R++ EITV+G++VP+PV++F + FP YV+ EV GF PTAIQAQGWPMAL GRD++GIAETGSGKTL Y LPAIVH+NAQP+LAPGDGPIVLVLAPTRELAVQIQ E KFG SSRI+NTC+YGGVPKGPQ+RDL +GVE+ IATPGRLIDML++ TNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQT WSATWPK+V QLA+ FL++ +V IGS DL ANH I Q V IVSE +K +++ K L+ IM+ S++LIF TK+ D ITR LR DGWPALSIHGDK Q ERDWVL+EFK GKSPIM ATDVA+RG+DV+D+ +V+NYD+P + EDYVHRIGRTGRAGAKGTA T FT NA+ A++L+AIL E+ Q++ P LA M R Sbjct: 70 AGLKTQNWDLSTMPKFEKSFYKEHPNVSQRSTHEVDAFRKEHEITVQGKNVPRPVETFDEAGFPQYVMSEVKAQGFARPTAIQAQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQTEITKFGKSSRIRNTCVYGGVPKGPQIRDLTRGVEVCIATPGRLIDMLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTCMWSATWPKDVRQLAQDFLHDYIQVNIGSMDLSANHRITQIVEIVSEFEKRDRMAKHLDRIMEANKHSKVLIFTGTKRVADDITRFLRQDGWPALSIHGDKQQNERDWVLNEFKTGKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYVHRIGRTGRAGAKGTAITLFTTDNAKQARDLVAILSESKQQIDPRLAEMAR 508
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy Swiss-Prot
Match: DBP2_PICGU (ATP-dependent RNA helicase DBP2 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) GN=DBP2 PE=3 SV=3) HSP 1 Score: 581.252 bits (1497), Expect = 0.000e+0 Identity = 290/425 (68.24%), Postives = 339/425 (79.76%), Query Frame = 1 Query: 358 DLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIM--DGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPEL 1626 DLD L FEKNFY E P V+A SE EV+ +R++ ++ G D+PKP+ SF + FPDYVL EV + GF +PTAIQ QGWPMAL GRD+IGIA TGSGKTL+Y LP+IVH+NAQP+L PGDGPIVLVLAPTRELAVQIQQE +KFGASSRI+NTCIYGG PKG Q+RDL +GVEI IATPGRLIDML++ TNLRRVTYLVLDEADRMLDMGFEPQIRKIV QIRPDRQTL WSATWPKEV+ L R +L +P +V IGS +L A+H I Q V ++SE +K ++LVK LE +++LIF TK+ CD+IT LR DGWPAL+IHGDK Q ERDWVL EFK GKSPIM ATDVAARG+DVK + YVINYD PG++EDYVHRIGRTGRAG GTA + FT AN++ +L I+ EA Q V PEL Sbjct: 78 DLDSLPKFEKNFYSEHPDVSARSESEVQSFRKEHDMKCVGTDIPKPITSFDEAGFPDYVLNEVKQQGFPKPTAIQCQGWPMALSGRDMIGIAATGSGKTLSYCLPSIVHINAQPLLGPGDGPIVLVLAPTRELAVQIQQECSKFGASSRIRNTCIYGGAPKGQQIRDLARGVEICIATPGRLIDMLETGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQTLTRDYLNDPIQVTIGSLELAASHTITQIVEVLSEFEKRDRLVKHLETATADKEAKVLIFSSTKRACDEITSYLRADGWPALAIHGDKQQNERDWVLREFKTGKSPIMVATDVAARGIDVKGISYVINYDMPGNIEDYVHRIGRTGRAGTTGTAVSLFTEANSKLGGDLCKIMREANQTVPPEL 502
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy Swiss-Prot
Match: DBP2_NEUCR (ATP-dependent RNA helicase dbp2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=drh-1 PE=3 SV=2) HSP 1 Score: 580.867 bits (1496), Expect = 0.000e+0 Identity = 295/440 (67.05%), Postives = 351/440 (79.77%), Query Frame = 1 Query: 334 AGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDG----SRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGR 1641 AG + D+ L FEK+FY E PSVA S EV+++R I V G +VPKPV++F + FP YV+ EV GF PTAIQ+QGWPMAL GRD++GIAETGSGKTL Y LPAIVH+NAQP+LAPGDGPIVL+LAPTRELAVQIQQE +KFG SSRI+NTC+YGGVPKGPQ+RDL +GVE+ IATPGRLIDML+S TNLRRVTYLVLDEADRMLDMGFEPQIRKI+ QIRPDRQTL WSATWPKEV LA FL + +V IGS DL ANH I Q V +VSES+K ++++K LE IM+G ++ILIF TK+ D ITR LR DGWPALSIHGDK Q ERDWVL +FK GKSPIM ATDVA+RG+DV+++ +V+NYD+P + EDY+HRIGRTGRAGAKGTA TFFT N++ A+EL+ +L+EA Q++ P LA M R Sbjct: 77 AGLQKQNWDMSALPKFEKSFYQEHPSVANRSPAEVDKFRADHSIAVFGNNVPKPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPGDGPIVLILAPTRELAVQIQQEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTLMWSATWPKEVRNLAADFLTDFIQVNIGSMDLAANHRITQIVEVVSESEKRDRMIKHLEKIMEGRENQNKILIFTGTKRVADDITRFLRQDGWPALSIHGDKQQNERDWVLDQFKTGKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTTDNSKQARELVGVLQEAKQQIDPRLAEMAR 516
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy Swiss-Prot
Match: DBP2_CHAGB (ATP-dependent RNA helicase DBP2 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) GN=DBP2 PE=3 SV=1) HSP 1 Score: 578.17 bits (1489), Expect = 0.000e+0 Identity = 294/440 (66.82%), Postives = 351/440 (79.77%), Query Frame = 1 Query: 334 AGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDG----SRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGR 1641 AG + DLD L FEK+FY E P+VAA S+ EV+++R+ +TV G +VP PV++F + FP YV+ EV GF PTAIQ+QGWPMAL GRD++GIAETGSGKTL Y LPAIVH+NAQP+LAPGDGPIVLVLAPTRELAVQIQQE KFG SSRI+NTC+YGGVPKGPQ RDL +GVE+ IATPGRLIDML+S TNLRRVTYLVLDEADRMLDMGFEPQIRKI+ QIRPDRQT WSATWPKEV LA FL + +V IGS DL ANH I Q V +V+ES+K +K++K LE IM+ ++ILIF TK+ D+ITR LR DGWPALSIHGDK Q ERDWVL +FK GKSPIM ATDVA+RG+DV+++ +V+NYD+P + EDY+HRIGRTGRAGAKGTA TFFT N++ A++L+ +L+EA Q + P LA M R Sbjct: 81 AGLQKQNWDLDTLPKFEKSFYQEHPNVAARSQAEVDKFRRDHAMTVAGNNVPSPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQQEITKFGKSSRIRNTCVYGGVPKGPQTRDLSRGVEVCIATPGRLIDMLESGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTCMWSATWPKEVRALASDFLTDFIQVNIGSMDLAANHRITQVVEVVNESEKRDKMIKHLEKIMEDKESQNKILIFTGTKRVADEITRFLRQDGWPALSIHGDKQQNERDWVLDQFKTGKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTTDNSKQARDLVGVLQEAKQHIDPRLAEMVR 520
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy Swiss-Prot
Match: DBP2_MAGO7 (ATP-dependent RNA helicase DBP2 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=DBP2 PE=3 SV=1) HSP 1 Score: 575.859 bits (1483), Expect = 0.000e+0 Identity = 287/438 (65.53%), Postives = 354/438 (80.82%), Query Frame = 1 Query: 334 AGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDG----SRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAM 1635 AG + D++ L FEK+FY E P V S+ EV+++R++ + V+G DVPKPV++F + FP YV+ EV GF PTAIQ+QGWPMAL GRD++GIAETGSGKTL Y LPAIVH+NAQP+LAPGDGPIVL+LAPTRELAVQIQ E +KFG SSRI+NTC+YGGVPKGPQ+RDL +GVE+ IATPGRLIDML+S TNLRRVTYLVLDEADRMLDMGFEPQIRKI+ QIRPDRQTL WSATWPKEV +A FL + +V IGS DL ANH I Q V +VSES+K +++++ +E +MDG ++ILIF+ TK+ D+ITR LR DGWPALSIHGDK Q ERDWVL +FK GKSPIM ATDVA+RG+DV+++ +V+NYD+P + EDY+HRIGRTGRAGAKGTA TFFT N++ A++L+ +L+EA Q++ P LA M Sbjct: 70 AGLQKQDWDINALPKFEKHFYKEHPDVTNRSQAEVDKFRREHSMAVQGSDVPKPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPGDGPIVLILAPTRELAVQIQAEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTLMWSATWPKEVRNMAADFLQDFIQVNIGSLDLSANHRITQIVEVVSESEKRDRMIRHMEKVMDGKDSKNKILIFVGTKRVADEITRFLRQDGWPALSIHGDKQQNERDWVLDQFKTGKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTTENSKQARDLLGVLQEAKQEIDPRLAEM 507
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy Swiss-Prot
Match: DBP2_COCIM (ATP-dependent RNA helicase DBP2 OS=Coccidioides immitis (strain RS) GN=DBP2 PE=3 SV=2) HSP 1 Score: 574.704 bits (1480), Expect = 0.000e+0 Identity = 290/438 (66.21%), Postives = 350/438 (79.91%), Query Frame = 1 Query: 334 AGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDG--SRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGR 1641 +G ++ DL+ L FEK+FY E P+V S +VE +R++ E+TV G++VP+PV++F + FP YV+ EV GF +PT IQ+QGWPMAL GRD++GIAETGSGKTL Y LPAIVH+NAQP+L PGDGPIVLVLAPTRELAVQIQ E KFG SSRI+NTC+YGGVP+GPQ+RDL +GVE+ IATPGRLIDML++ TNLRRVTYLVLDEADRMLDMGFEPQIRKI+ QIRPDRQT WSATWPKEV QLA FL++ +V IGS DL ANH I Q V IVS+ +K ++++ LE IMD S+ILIF TK+ D ITR LR DGWPALSIHGDK Q ERDWVL+EFK GKSPIM ATDVA+RG+DV+D+ +V+NYD+P + EDYVHRIGRTGRAGAKGTA T FT NA+ A++L+ IL E+ Q++ P LA M R Sbjct: 73 SGLKQQEWDLNALPKFEKHFYKEHPNVTNRSAQDVEAFRKEHEMTVYGKNVPRPVETFDEAGFPQYVISEVKAQGFAKPTPIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLGPGDGPIVLVLAPTRELAVQIQAEITKFGKSSRIRNTCVYGGVPRGPQIRDLSRGVEVCIATPGRLIDMLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTCMWSATWPKEVRQLAHDFLHDYIQVYIGSQDLSANHRITQIVEIVSDFEKRDRMINHLERIMDDKKSKILIFTGTKRVADDITRFLRQDGWPALSIHGDKQQNERDWVLNEFKTGKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYVHRIGRTGRAGAKGTAITLFTTDNAKQARDLVNILTESKQQIDPRLAEMAR 510
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy Swiss-Prot
Match: DBP2_KLULA (ATP-dependent RNA helicase DBP2 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=DBP2 PE=3 SV=1) HSP 1 Score: 570.081 bits (1468), Expect = 0.000e+0 Identity = 285/431 (66.13%), Postives = 344/431 (79.81%), Query Frame = 1 Query: 358 DLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIM--DGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGRG 1644 +L L FEKNFY E P VA MSE EV E+R++ E+T+ G DVPKP++SF + FP YVL EV + GF +PT IQ QGWPMAL GRD+IG+A TGSGKTL+Y LP IVH+NAQP+L+PGDGPIVLVLAPTRELAVQIQ+E +KFGASSRI+NTC+YGGVPK Q+RDLQ+GVEI+IATPGRLIDML+ TNL+RVTYLVLDEADRMLDMGFEPQIRKIV QIRPDRQTL WSATWPKEV+QLA +L++P +V IGS +L A+H I Q V ++++ +K ++L K LE S+I+IF TK+ CD+IT LR +GWPAL+IHGDK+Q ERDWVL+EF++G+SPIM ATDVAARG+DVK + YVINYD PG++EDYVHRIGRTGRAG+ GTA +FFT N LI I+ EA Q + EL RG Sbjct: 66 ELPNLPVFEKNFYQEHPDVAQMSESEVIEFRKENEMTISGHDVPKPIRSFDEAGFPSYVLDEVKQEGFAKPTGIQCQGWPMALSGRDMIGVAATGSGKTLSYCLPGIVHINAQPLLSPGDGPIVLVLAPTRELAVQIQKECSKFGASSRIRNTCVYGGVPKSQQIRDLQRGVEILIATPGRLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVKQLASDYLHDPIQVQIGSLELSASHTITQIVEVLTDFEKRDRLAKHLETASQDQDSKIIIFASTKRTCDEITSYLRTEGWPALAIHGDKAQNERDWVLAEFRSGRSPIMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGSTGTAISFFTEGNKSLGAALIKIMREAKQDIPEELRRYDRG 496
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy Swiss-Prot
Match: DBP2_DEBHA (ATP-dependent RNA helicase DBP2 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=DBP2 PE=3 SV=1) HSP 1 Score: 569.311 bits (1466), Expect = 0.000e+0 Identity = 280/430 (65.12%), Postives = 339/430 (78.84%), Query Frame = 1 Query: 358 DLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDG--SRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGR 1641 D+D L FEKNFY E P V A S +V +R++ ++ +G D+PKP+ SF + FPDYVL+EV + GF +PT+IQ QGWPMAL GRD++GIA TGSGKTL+Y LP+IVH+NAQP+L+PGDGPIVLVLAPTRELAVQIQQE +KFG+SSRI+NTC+YGG PKG Q+RDL +GVEI IATPGRLIDML++ TNLRRVTYLVLDEADRMLDMGFEPQIRKIV QIRPDRQTL WSATWPKEV+ L R +L +P +V +GS +L A+H I Q V +V+E +K ++L+K LE ++ LIF TK+ CD+IT LR DGWPAL+IHGDK Q ERDWVL EFK GKSPIM ATDVAARG+DVK + YVIN D PG++EDYVHRIGRTGRAG+ GTA +FFT N++ +L I+ EA Q + PEL R Sbjct: 58 DIDSLPKFEKNFYNEHPDVTARSVQDVNAFRKEHDMKCDGTDIPKPITSFDEAGFPDYVLKEVKQQGFPKPTSIQCQGWPMALSGRDMVGIASTGSGKTLSYCLPSIVHINAQPLLSPGDGPIVLVLAPTRELAVQIQQECSKFGSSSRIRNTCVYGGAPKGQQIRDLARGVEICIATPGRLIDMLETGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQALTRDYLNDPIQVTVGSLELAASHTITQLVEVVTEFEKRDRLIKHLETATADPEAKCLIFASTKRTCDEITNYLRADGWPALAIHGDKQQGERDWVLKEFKTGKSPIMVATDVAARGIDVKGISYVINLDMPGNIEDYVHRIGRTGRAGSTGTAVSFFTDNNSKLGGDLCKIMREANQTIPPELMRFDR 487
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy Swiss-Prot
Match: DBP2_ASHGO (ATP-dependent RNA helicase DBP2 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DBP2 PE=3 SV=2) HSP 1 Score: 568.926 bits (1465), Expect = 0.000e+0 Identity = 289/442 (65.38%), Postives = 352/442 (79.64%), Query Frame = 1 Query: 358 DLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIM--DGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGF 1677 D++ L FEKNFYVE V MS EVE++R++ E+ + G DVPKP+++F + FP+YVL+EV + GF +PTAIQ QGWPMAL GRD+IG+A TGSGKTL+Y LP IVH+NAQP+L+PGDGP+VLVLAPTRELAVQIQ+E +KFG SSRI+NTC+YGGVPK Q+RDLQ+GVEI+IATPGRLIDML+ TNL+RVTYLVLDEADRMLDMGFEPQIRKIV QIRPDRQTL WSATWPKEV+QLAR +L++P +V IGS +L A+H I Q V +VS+ K ++LVK LE S+I+IF TK+ CD+IT LR DGWPAL+IHGDK Q ERDWVL+EF+ G+SPIM ATDVAARG+DVK + +VINYD PG++EDYVHRIGRTGRAGA GTA +FFT AN +LI+I+ EA Q++ +L R AP GGF Sbjct: 67 DVESLPKFEKNFYVEHEDVQKMSTDEVEQFRKENEMKIVGHDVPKPIRTFDEAGFPEYVLKEVKEEGFEKPTAIQCQGWPMALSGRDMIGVAATGSGKTLSYCLPGIVHINAQPLLSPGDGPVVLVLAPTRELAVQIQKECSKFGRSSRIRNTCVYGGVPKSQQIRDLQRGVEILIATPGRLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQQLARDYLHDPIQVNIGSLELAASHTITQLVEVVSDFDKRDRLVKHLEIASKDKDSKIIIFASTKRTCDEITSYLRQDGWPALAIHGDKQQQERDWVLNEFRTGRSPIMVATDVAARGIDVKGINFVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEANKTLGAQLISIMREAKQEIPQDLLVYDR-AP-----RGGF 502
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy Swiss-Prot
Match: DBP2_PICST (ATP-dependent RNA helicase DBP2 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) GN=DBP2 PE=3 SV=1) HSP 1 Score: 567.385 bits (1461), Expect = 0.000e+0 Identity = 281/430 (65.35%), Postives = 338/430 (78.60%), Query Frame = 1 Query: 358 DLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIM--DGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGR 1641 DL+ L FEKNFY E P VAA S+ ++ +R + +++ G D+P P+ +F + FP+YVL EV GF PTAIQ QGWPMAL GRD++GIA TGSGKTL+Y LPAIVH+NAQP+L+PGDGP+VLVLAPTRELAVQIQQE +KFG+SSRI+NTC+YGG PKG Q+RDL +GVEIVIATPGRLIDML+ TNL+RVTYLVLDEADRMLDMGFEPQIRKIV QIRPDRQTL WSATWPKEV+ LAR +L +P +V IGS +L A+H I Q V ++SE +K ++LVK LE S++LIF TKK CD++T LR DGWPAL+IHGDK Q+ERDWVL EFK GKSPIM ATDVAARG+DVK + +VIN+D PG++EDYVHRIGRTGR GA GTA +FFT N + +L I+ EA Q + PEL R Sbjct: 50 DLESLPKFEKNFYTEHPDVAARSDKDIAAFRNEHQMSCLGSDIPHPITTFDEAGFPEYVLNEVKAQGFPSPTAIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPAIVHINAQPLLSPGDGPVVLVLAPTRELAVQIQQECSKFGSSSRIRNTCVYGGAPKGQQIRDLARGVEIVIATPGRLIDMLEMGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQNLARDYLQDPIQVRIGSLELAASHTITQVVEVISEYEKRDRLVKHLETATTEKESKVLIFASTKKTCDEVTSYLRADGWPALAIHGDKQQSERDWVLREFKTGKSPIMVATDVAARGIDVKGINFVINFDMPGNIEDYVHRIGRTGRGGATGTAVSFFTDGNNKLGGDLCKIMREAKQTIPPELQRFDR 479 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0013834 ID=g.arboreum_cottongen_reftransV1_0013834; Name=g.arboreum_cottongen_reftransV1_0013834; organism=Gossypium arboreum; type=contig; length=1987bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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