g.arboreum_cottongen_reftransV1_0013834, g.arboreum_cottongen_reftransV1_0013834 (contig) Gossypium arboreum
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy TrEMBL
Match: V7AQF3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G139400g PE=3 SV=1) HSP 1 Score: 839.336 bits (2167), Expect = 0.000e+0 Identity = 437/507 (86.19%), Postives = 464/507 (91.52%), Query Frame = 1 Query: 205 MSRYDSRSGDPASYRDRRXXXXXXXXXXXX--XXXXXXXXRKDYDAGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGKGYSGGRTWS 1719 MSRYDSRS DP SYRDRRSDSG G ++ +G S + R D G P R L LDGL FEKNFY+ESP+V AM++ EV EYRQ+REITVEGRD+PKPVK+F D FP+YVLQE+ KAGF EPT IQ+QGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPIL PGDGPIVLVLAPTRELAVQIQQEA KFGASSRIK+TCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDML+S+HTNL+RVTYLVLDEADRMLDMGF+PQ+RKIVSQIRPDRQTLYWSATWPKEVEQLAR+FLYNPYKVIIGS DLKANHAIRQ+V+IVSE QKY+KLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFK+GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPP PSG GF+DRG+GY R WS Sbjct: 1 MSRYDSRSSDPTSYRDRRSDSGLGASTGFGGPVQHSSSNKRDHDDGGSPKRNLSLDGLPHFEKNFYIESPAVRAMTDAEVNEYRQQREITVEGRDIPKPVKTFQDAGFPEYVLQEITKAGFTEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQEATKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESNHTNLQRVTYLVLDEADRMLDMGFDPQLRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYNPYKVIIGSEDLKANHAIRQYVDIVSEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPLPSGPRGFQDRGRGYGSSRPWS 507
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy TrEMBL
Match: M5XBL9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004545mg PE=3 SV=1) HSP 1 Score: 837.025 bits (2161), Expect = 0.000e+0 Identity = 435/486 (89.51%), Postives = 458/486 (94.24%), Query Frame = 1 Query: 205 MSRYDSRSGDPASYRDRRXXXXXXXXXXXXXXXXXXXXRKDYDAGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPS 1662 MSRYDSRSGDP SYRDR+SDSGFG G + S S +KD D E PRK DLDGLTPFEKNFYVESP V MSE EVE+YRQ+REIT+EGRDVPKP+KSF D FP+YVL+EV KAGFVEPT IQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPIL+PGDGPIVLVLAPTRELAVQIQQEA KFG+SS+IK+TCIYGGVPKGPQVRDLQ+GVEIVIATPGRLIDM++SHHTNLRRVTYLVLDEADRMLDMGF+PQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGS DLKANHAIRQ V+I++E+QKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVK+VINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIA+LEEAGQKVSPELAAMGRGAPPPPS Sbjct: 1 MSRYDSRSGDPTSYRDRKSDSGFGVTGYGGSARSSSS-KKDCDGAESPRKFDLDGLTPFEKNFYVESPEVERMSEKEVEDYRQRREITIEGRDVPKPIKSFRDTGFPEYVLEEVTKAGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEATKFGSSSKIKSTCIYGGVPKGPQVRDLQRGVEIVIATPGRLIDMIESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSPDLKANHAIRQIVDIITENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKFVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIALLEEAGQKVSPELAAMGRGAPPPPS 485
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy TrEMBL
Match: A2Q465_MEDTR (DEAD-box ATP-dependent RNA helicase OS=Medicago truncatula GN=MTR_2g100230 PE=3 SV=1) HSP 1 Score: 835.869 bits (2158), Expect = 0.000e+0 Identity = 435/505 (86.14%), Postives = 459/505 (90.89%), Query Frame = 1 Query: 205 MSRYDSRSGDPASYRDRRXXXXXXXXXXXXXXXXXXXXRKDYDAGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGKGYSGGRTWS 1719 MSRYDSRS DP SYRDRRSDSG S + + + P RK++LDGL FEKNFY ESPSV AM+E EV EYR +REITVEG+DVPKPVKSF+D FPDYVL+EV KAGFVEPT IQ+QGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPIL PGDGPIVLVLAPTRELAVQIQQEA KFGASSRIK+TCIYGGVPKGPQVRDLQKGVEI+IATPGRLIDML+S+HTNLRRVTYLVLDEADRMLDMGF+PQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGS DLKANHAI+Q+V+IV E QKY+KLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFK+GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELI+ILEEAGQ+VS ELAAMGRGAPPPPS GGFRDRGK + GR WS Sbjct: 1 MSRYDSRSSDPTSYRDRRSDSGLAAPSPSPSPSI----KNEGASASPARKINLDGLPHFEKNFYSESPSVRAMTEAEVTEYRLRREITVEGKDVPKPVKSFSDAAFPDYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQEATKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIIIATPGRLIDMLESNHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELISILEEAGQRVSSELAAMGRGAPPPPS--GGFRDRGKSFGSGRPWS 499
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy TrEMBL
Match: I3SPD5_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 833.558 bits (2152), Expect = 0.000e+0 Identity = 433/505 (85.74%), Postives = 458/505 (90.69%), Query Frame = 1 Query: 205 MSRYDSRSGDPASYRDRRXXXXXXXXXXXXXXXXXXXXRKDYDAGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGKGYSGGRTWS 1719 MSRYDSRS DP SYRDRRSDSG S + + + P RK++LDGL FEKNFY ESPSV AM+E EV EYR +REITVEG+DVPKPVKSF+D FPDYVL+EV KAGFVEPT IQ+QGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPIL PGDGPIVLVLAPTRELAVQIQQEA KFGASSRIK+TCIYGGVPKGPQVRDLQKGVEI+IATPGRLIDML+S+HTNLRRVTYLVLDEADRMLDMGF+PQIRKIV QIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGS DLKANHAI+Q+V+IV E QKY+KLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFK+GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIG+TGRAGAKGTAYTFFTAANARFAKELI+ILEEAGQ+VS ELAAMGRGAPPPPS GGFRDRGK + GR WS Sbjct: 1 MSRYDSRSSDPTSYRDRRSDSGLAAPSPSPSPSI----KNEGASASPARKINLDGLPHFEKNFYSESPSVRAMTEAEVTEYRLRREITVEGKDVPKPVKSFSDAAFPDYVLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELAVQIQQEATKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIIIATPGRLIDMLESNHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVPQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSEDLKANHAIKQYVDIVPEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGKTGRAGAKGTAYTFFTAANARFAKELISILEEAGQRVSSELAAMGRGAPPPPS--GGFRDRGKSFGSGRPWS 499
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy TrEMBL
Match: D7KM60_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_474570 PE=3 SV=1) HSP 1 Score: 828.935 bits (2140), Expect = 0.000e+0 Identity = 432/501 (86.23%), Postives = 470/501 (93.81%), Query Frame = 1 Query: 205 MSRYDSRSGDPASYRDRRXXXXXXXXXXXXXXXXXXXXRKDYDAGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRG--KGYS 1701 MSRYDSR+GD S+RDRRSDSGFGG SAYG SG SS+KD D E PRKLDLDGLTPFEKNFYVESP+VAAM++ EVEEYR+ REITVEG+D+PKPVKSF DV FPDYVL+E+ KAGF EPT IQ+QGWPMA+KGRDLIGIAETGSGKT++YLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEA+KFG+SS+IK+TCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM++S++TNLRRVTYLVLDEADRMLDMGF+PQIRKIVS IRPDRQTLYWSATWPKEVEQL+++FLYNPYKVIIGS+DLKAN AIRQ V+++SESQKYNKLVKLLEDIMDGSRIL+F+DTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEF++GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFT ANARFAKEL ILEEAGQKVSPELA+MGR PPP G GGFRDRG +G+S Sbjct: 1 MSRYDSRTGDSTSFRDRRSDSGFGGTSAYGSSGSHSSSKKDNDGNESPRKLDLDGLTPFEKNFYVESPTVAAMTDTEVEEYRKLREITVEGKDIPKPVKSFRDVGFPDYVLEEIKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTISYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEASKFGSSSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESNNTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHIRPDRQTLYWSATWPKEVEQLSKKFLYNPYKVIIGSSDLKANRAIRQIVDVISESQKYNKLVKLLEDIMDGSRILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTVANARFAKELSNILEEAGQKVSPELASMGRSTAPPPPGLGGFRDRGSRRGWS 501
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy Swiss-Prot
Match: RH20_ARATH (DEAD-box ATP-dependent RNA helicase 20 OS=Arabidopsis thaliana GN=RH20 PE=2 SV=1) HSP 1 Score: 827.009 bits (2135), Expect = 0.000e+0 Identity = 431/501 (86.03%), Postives = 468/501 (93.41%), Query Frame = 1 Query: 205 MSRYDSRSGDPASYRDRRXXXXXXXXXXXXXXXXXXXXRKDYDAGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRG--KGYS 1701 MSRYDSR+GD SYRDRRSDSGFGG S+YG SG SS+KD D E PRKLDLDGLTPFEKNFYVESP+VAAM++ EVEEYR+ REITVEG+D+PKPVKSF DV FPDYVL+EV KAGF EPT IQ+QGWPMA+KGRDLIGIAETGSGKTL+YLLPAIVHVNAQP+LA GDGPIVLVLAPTRELAVQIQQEA+KFG+SS+IK TCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM++S++TNLRRVTYLVLDEADRMLDMGF+PQIRKIVS IRPDRQTLYWSATWPKEVEQL+++FLYNPYKVIIGS+DLKAN AIRQ V+++SESQKYNKLVKLLEDIMDGSRIL+F+DTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEF++GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFT ANARFAKEL IL+EAGQKVSPELA+MGR PPP G GGFRDRG +G+S Sbjct: 1 MSRYDSRTGDSTSYRDRRSDSGFGGTSSYGSSGSHTSSKKDNDGNESPRKLDLDGLTPFEKNFYVESPAVAAMTDTEVEEYRKLREITVEGKDIPKPVKSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIVHVNAQPMLAHGDGPIVLVLAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESNNTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHIRPDRQTLYWSATWPKEVEQLSKKFLYNPYKVIIGSSDLKANRAIRQIVDVISESQKYNKLVKLLEDIMDGSRILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTVANARFAKELTNILQEAGQKVSPELASMGRSTAPPPPGLGGFRDRGSRRGWS 501
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy Swiss-Prot
Match: RH20_ORYSJ (DEAD-box ATP-dependent RNA helicase 20 OS=Oryza sativa subsp. japonica GN=Os01g0197200 PE=3 SV=2) HSP 1 Score: 811.216 bits (2094), Expect = 0.000e+0 Identity = 427/505 (84.55%), Postives = 452/505 (89.50%), Query Frame = 1 Query: 205 MSRYDSRSGDPASYRDRRXXXXXXXXXXXXXXXXXXXXRKDYDAGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGKGYSGGRTWS 1719 MSR+D R+ DP SYRDRRS+ FGG + S DLDGL FEKNFYVESPSVA M+E EVE YR++REITVEGRDVPKPV+ F DV FP+YVLQE+ KAGFVEPT IQ+QGWPMAL+GRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEA KFGASS+IK+TCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM++SHHTNLRRVTYLVLDEADRMLDMGFEPQI+KIVSQIRPDRQTLYWSATWPKEVEQLAR FL++PYKVIIGS +LKANHAI QHV I+SESQKYNKLV LLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFK+GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAK+LI ILEEAGQKVSPELA MGRGAPPP SGH RDR +GY GGR+WS Sbjct: 1 MSRFDGRAADPGSYRDRRSEGAFGGGTRAFAPTSKADSAAA--------AADLDGLPRFEKNFYVESPSVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVLQEITKAGFVEPTPIQSQGWPMALRGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEATKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMIESHHTNLRRVTYLVLDEADRMLDMGFEPQIKKIVSQIRPDRQTLYWSATWPKEVEQLARNFLFDPYKVIIGSEELKANHAISQHVEILSESQKYNKLVNLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKDLINILEEAGQKVSPELANMGRGAPPPSSGH---RDRYRGYGGGRSWS 494
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy Swiss-Prot
Match: RH30_ORYSJ (DEAD-box ATP-dependent RNA helicase 30 OS=Oryza sativa subsp. japonica GN=Os01g0911100 PE=2 SV=2) HSP 1 Score: 676.396 bits (1744), Expect = 0.000e+0 Identity = 334/456 (73.25%), Postives = 391/456 (85.75%), Query Frame = 1 Query: 352 KLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGKGYSGGRTWS 1719 K D L PFEKNFYVE P+V AMS+M+V +YR++R+ITVEG DVPKPV+ F + FPDY +Q + K+GFVEPT IQ+QGWPMALKGRD+IGIA+TGSGKTL+YLLP +VHV AQP L GDGPIVL+LAPTRELAVQIQQE+ KFG+ SR ++TCIYGG PKGPQ+RDL++GVEIVIATPGRLIDML+ HTNLRRVTYLVLDEADRMLDMGFEPQIRKIV+QIRPDRQTLYWSATWP+EVE LARQFL NPYKVIIGS DLKANH+I+Q + ++SE +KY +L KLL D+MDGSRILIF TKK CD++TRQLRMDGWPALSIHGDK+QAERD+VL+EFK+GKSPIM ATDVAARGLDVKD+K VIN+DFP +LEDY+HRIGRTGRAGA GTA+TFFT +NA+F++ L+ IL EAGQ V+P L +M + A G G FR RG+G G R+ S Sbjct: 202 KPDFRSLIPFEKNFYVECPAVQAMSDMDVSQYRRQRDITVEGHDVPKPVRYFQEANFPDYCMQAIAKSGFVEPTPIQSQGWPMALKGRDMIGIAQTGSGKTLSYLLPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQQESGKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEGGHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVAQIRPDRQTLYWSATWPREVESLARQFLQNPYKVIIGSPDLKANHSIQQIIEVISEHEKYPRLSKLLSDLMDGSRILIFFQTKKDCDKVTRQLRMDGWPALSIHGDKAQAERDYVLAEFKSGKSPIMAATDVAARGLDVKDIKCVINFDFPTTLEDYIHRIGRTGRAGASGTAFTFFTLSNAKFSRNLVKILREAGQVVNPALESMAKSA--SSMGGGNFRSRGRGGFGNRSGS 655
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy Swiss-Prot
Match: RH30_ARATH (DEAD-box ATP-dependent RNA helicase 30 OS=Arabidopsis thaliana GN=RH30 PE=2 SV=2) HSP 1 Score: 642.884 bits (1657), Expect = 0.000e+0 Identity = 318/430 (73.95%), Postives = 373/430 (86.74%), Query Frame = 1 Query: 352 KLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGR 1641 K + L FEKNFYVESP+V AM+E +V YR +R+I+VEGRDVPKP+K F D FPD +L+ + K GF EPT IQAQGWPMALKGRDLIGIAETGSGKTLAYLLPA+VHV+AQP L DGPIVL+LAPTRELAVQIQ+E+ KFG S +++TCIYGG PKGPQ+RDL++GVEIVIATPGRLIDML+ HTNL+RVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTL WSATWP+EVE LARQFL +PYK IIGS DLKAN +I Q + IV +KYN+L+ LL+ +MDGS+ILIF++TK+GCDQ+TRQLRMDGWPAL+IHGDK+Q+ERD VL+EFK+G+SPIMTATDVAARGLDVKD+K V+NYDFP +LEDY+HRIGRTGRAGAKG A+TFFT NA+FA+EL+ IL+EAGQ V P L+A+ R Sbjct: 116 KQNFGNLVHFEKNFYVESPTVQAMTEQDVAMYRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPRLGQDDGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLLTLLKQLMDGSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFARELVKILQEAGQVVPPTLSALVR 545
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy Swiss-Prot
Match: DBP2_NEOFI (ATP-dependent RNA helicase dbp2 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=dbp2 PE=3 SV=1) HSP 1 Score: 597.045 bits (1538), Expect = 0.000e+0 Identity = 302/438 (68.95%), Postives = 358/438 (81.74%), Query Frame = 1 Query: 334 AGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMD--GSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGR 1641 AG + DLD L FEK+FY E P VAA SE EVEE+R+K E+TV+GR+VP+PV++F + FP YVL EV GF PTAIQ+QGWPMAL GRD++GIAETGSGKTL Y LPAIVH+NAQP+LAPGDGPIVL+LAPTRELAVQIQ E +KFG SSRI+NTC+YGGVPKGPQ+RDL +GVE+ IATPGRLIDML++ TNLRRVTYLVLDEADRMLDMGFEPQIRKI+SQIRPDRQT WSATWPKEV QLA FL + +V IGS DL ANH I Q V +VS+ +K +K++K LE IM+ G++ LIF TK+ D+ITR LR DGWPALSIHGDK Q ERDWVL+EFK GKSPIM ATDVA+RG+DV+D+ +V+NYD+P + EDY+HRIGRTGRAGAKGTA TFFT N++ A++L+ IL EA Q++ P LA M R Sbjct: 64 AGLKKQDWDLDTLPKFEKSFYKEHPDVAARSEREVEEFRKKHEMTVQGRNVPRPVENFDEAGFPQYVLSEVKAQGFERPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPGDGPIVLILAPTRELAVQIQTEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTCMWSATWPKEVRQLATDFLNDYIQVNIGSMDLSANHRITQIVEVVSDFEKRDKMIKHLEKIMENRGNKCLIFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKTGKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTTENSKQARDLVTILTEAKQQIDPRLAEMVR 501
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy Swiss-Prot
Match: DBP2_EMENI (ATP-dependent RNA helicase dbp2 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=dbp2 PE=3 SV=1) HSP 1 Score: 596.66 bits (1537), Expect = 0.000e+0 Identity = 301/438 (68.72%), Postives = 359/438 (81.96%), Query Frame = 1 Query: 334 AGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMD--GSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGR 1641 +G + DLD L FEK+FY E P V A S+ EV+E+R+K E+TV+GRDVP+PV++F + FP YVL EV GF +PTAIQ+QGWPMAL GRD++GIAETGSGKTL+Y LPAIVH+NAQP+LAPGDGPIVL+LAPTRELAVQIQ E +KFG SSRI+NTC+YGGVPKGPQ+RDL +GVE+ IATPGRLIDML++ TNLRRVTYLVLDEADRMLDMGFEPQIRKI+SQIRPDRQT WSATWPKEV QLA FL N +V IGS DL ANH I Q V ++SE +K ++++K LE IM+ G++ L+F TK+ D+ITR LR DGWPALSIHGDK Q ERDWVL+EFK GKSPIM ATDVA+RG+DV+D+ +VINYD+P + EDYVHRIGRTGRAGAKGTA TFFT NA+ A++L+ IL EA Q++ P LA M R Sbjct: 85 SGLKKQDWDLDTLPKFEKSFYKEHPDVTARSQREVDEFRKKCEMTVQGRDVPRPVETFDEAGFPQYVLSEVKAQGFEKPTAIQSQGWPMALSGRDVVGIAETGSGKTLSYCLPAIVHINAQPLLAPGDGPIVLILAPTRELAVQIQAEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTCMWSATWPKEVRQLASDFLNNYIQVNIGSMDLSANHRITQIVEVISEFEKRDRMIKHLEKIMENRGNKCLVFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKTGKSPIMVATDVASRGIDVRDITHVINYDYPNNSEDYVHRIGRTGRAGAKGTAITFFTTDNAKQARDLVTILSEAKQQIDPRLAEMVR 522
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy Swiss-Prot
Match: DBP2_ASPFU (ATP-dependent RNA helicase dbp2 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=dbp2 PE=3 SV=2) HSP 1 Score: 596.66 bits (1537), Expect = 0.000e+0 Identity = 302/438 (68.95%), Postives = 357/438 (81.51%), Query Frame = 1 Query: 334 AGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDG--SRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGR 1641 AG + DLD L FEK+FY E P VAA SE EVEE+R+K E+TV+GR+VP+PV++F + FP YVL EV GF PTAIQ+QGWPMAL GRD++GIAETGSGKTL Y LPAIVH+NAQP+LAPGDGPIVL+LAPTRELAVQIQ E +KFG SSRI+NTC+YGGVPKGPQ+RDL +GVE+ IATPGRLIDML++ TNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQT WSATWPKEV QLA FL + +V IGS DL ANH I Q V +VS+ +K +K++K LE IM+ ++ LIF TK+ D+ITR LR DGWPALSIHGDK Q ERDWVL+EFK GKSPIM ATDVA+RG+DV+D+ +V+NYD+P + EDY+HRIGRTGRAGAKGTA TFFT N++ A++L+ IL EA Q++ P LA M R Sbjct: 66 AGLKKQDWDLDSLPKFEKSFYKEHPDVAARSEREVEEFRKKHEMTVQGRNVPRPVENFDEAGFPQYVLSEVKAQGFERPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPGDGPIVLILAPTRELAVQIQAEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTCMWSATWPKEVRQLATDFLNDYIQVNIGSMDLSANHRITQIVEVVSDFEKRDKMIKHLEKIMENRSNKCLIFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKTGKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTTENSKQARDLVTILTEAKQQIDPRLAEMAR 503
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy Swiss-Prot
Match: DBP2_ASPCL (ATP-dependent RNA helicase dbp2 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=dbp2 PE=3 SV=1) HSP 1 Score: 588.956 bits (1517), Expect = 0.000e+0 Identity = 297/436 (68.12%), Postives = 357/436 (81.88%), Query Frame = 1 Query: 334 AGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMD--GSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAM 1635 AG ++ DL+ L FEK+FY E P V A S+ EV+E+RQ+ ++TV+G++VP+PV++F + FP YVL EV GF PTAIQ+QGWPMAL GRD++GIAETGSGKTL Y LPAIVH+NAQP+LAPGDGPIVLVLAPTRELAVQIQ E KFG SSRI+NTC+YGGVPKGPQ+RDL +GVE+ IATPGRLIDML++ TNLRRVTYLVLDEADRMLDMGFEPQIRKI+SQIRPDRQT WSATWPKEV QLA FL + +V IGS DL ANH I Q V +VS+ +K +K++K LE IM+ ++ILIF TK+ D+ITR LR DGWPALSIHGDK Q ERDWVL+EFKAGKSPIM ATDVA+RG+DV+D+ +V+NYD+P + EDY+HRIGRTGRAGAKGTA TFFT N++ A++L+ IL EA Q++ P LA M Sbjct: 70 AGLKKQEWDLETLPKFEKSFYKEHPDVTARSQREVDEFRQEHKMTVQGKNVPRPVETFDEAGFPQYVLSEVKSQGFERPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQTEITKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTCMWSATWPKEVRQLASDFLNDYIQVNIGSMDLSANHRITQIVEVVSDFEKRDKMIKHLEKIMEDRSNKILIFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKAGKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTTDNSKQARDLVTILTEAKQQIDPRLAEM 505
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy Swiss-Prot
Match: DBP2_ASPOR (ATP-dependent RNA helicase dbp2 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=dbp2 PE=3 SV=1) HSP 1 Score: 587.8 bits (1514), Expect = 0.000e+0 Identity = 297/438 (67.81%), Postives = 358/438 (81.74%), Query Frame = 1 Query: 334 AGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMD--GSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGR 1641 AG ++ DLD L FEK+FY E P VA S+ +V+E+R+K E++V+G+++P+PV++F + FP YVL EV GF PTAIQ+QGWPMAL GRD++GIAETGSGKTL+Y LPAIVH+NAQP+LAPGDGPIVLVLAPTRELAVQIQ E KFG SSRI+NTC+YGGVPKGPQ+RDL +GVE+ IATPGRLIDML++ TNLRRVTYLVLDEADRMLDMGFEPQIRKI+SQIRPDRQT WSATWPKEV QLA FL + +V IGS DL ANH I Q V +VS+ +K +K++K LE IM+ G++ LIF TK+ D+ITR LR DGWPALSIHGDK Q ERDWVL+EFK GKSPIM ATDVA+RG+DV+D+ +V+NYD+P + EDYVHRIGRTGRAGAKGTA TFFT N++ A++L+ IL EA Q++ P LA M R Sbjct: 75 AGLKKQEWDLDSLPKFEKSFYKEHPDVANRSQRDVDEFRKKFEMSVQGKNIPRPVETFDEAGFPQYVLSEVKAQGFERPTAIQSQGWPMALSGRDVVGIAETGSGKTLSYCLPAIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQAEITKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTCMWSATWPKEVRQLASDFLNDYIQVNIGSMDLSANHRITQIVEVVSDFEKRDKMIKHLEKIMENRGNKCLIFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKTGKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYVHRIGRTGRAGAKGTAITFFTTDNSKQARDLVTILTEAKQQIDPRLAEMVR 512
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy Swiss-Prot
Match: DBP2_ASPNC (ATP-dependent RNA helicase dbp2 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=dbp2 PE=3 SV=1) HSP 1 Score: 585.104 bits (1507), Expect = 0.000e+0 Identity = 296/438 (67.58%), Postives = 355/438 (81.05%), Query Frame = 1 Query: 334 AGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMD--GSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGR 1641 AG ++ DLD L FEK+FY E VA S+ +V+E+R+K E+ V+GR+VP+PV++F + FP YVL EV GF PTAIQ+QGWPMAL GRD++GIAETGSGKTL Y LPAIVH+NAQP+LAPGDGPIVL+LAPTRELAVQIQ E +KFG SSRI+NTC+YGGVPKGPQ+RDL +GVE+ IATPGRLIDML++ TNLRRVTYLVLDEADRMLDMGFEPQIRKI+SQIRPDRQT WSATWPKEV QLA FL + +V IGS DL ANH I Q V +VS+ +K +K++K LE IM+ ++ LIF TK+ D+ITR LR DGWPALSIHGDK Q ERDWVL+EFK GKSPIM ATDVA+RG+DV+D+ +V+NYD+P + EDYVHRIGRTGRAGAKGTA TFFT N++ A++L+ IL EA Q++ P LA M R Sbjct: 82 AGLKKQEWDLDSLPKFEKSFYKEHADVAERSQRDVDEFRKKHEMAVQGRNVPRPVETFDEAGFPQYVLSEVKAQGFDRPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPGDGPIVLILAPTRELAVQIQAEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTCMWSATWPKEVRQLASDFLNDYIQVNIGSMDLSANHRITQIVEVVSDFEKRDKMIKHLEKIMENRANKCLIFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKTGKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYVHRIGRTGRAGAKGTAITFFTTDNSKQARDLVTILTEAKQQIDPRLAEMVR 519 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0013834 ID=g.arboreum_cottongen_reftransV1_0013834; Name=g.arboreum_cottongen_reftransV1_0013834; organism=Gossypium arboreum; type=contig; length=1987bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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