g.arboreum_cottongen_reftransV1_0013834, g.arboreum_cottongen_reftransV1_0013834 (contig) Gossypium arboreum

Overview


Name	g.arboreum_cottongen_reftransV1_0013834
Unique Name	g.arboreum_cottongen_reftransV1_0013834
Type	contig
Organism	Gossypium arboreum (Tree cotton)
Sequence length	1987

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium arboreum CottonGen RefTrans V1	2016-11-14
InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1	2016-11-14
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL	2016-11-15
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt	2016-11-15

Homology

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy TrEMBL
Match: W9RUL7_9ROSA (DEAD-box ATP-dependent RNA helicase 20 OS=Morus notabilis GN=L484_004533 PE=3 SV=1)

HSP 1 Score: 857.055 bits (2213), Expect = 0.000e+0
Identity = 444/488 (90.98%), Postives = 464/488 (95.08%), Query Frame = 1

Query:  205 MSRYDSRSGDPASYRDRRXXXXXXXXXXXXXXXXXXXXRKDYDAGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGH 1668
            MSRYDSRSGDP SYRDRRSDSGFGG+     S R     +DYD GE P+K D+DGLTPFEKNFYVESPSVA+MSE EVEEYRQ+REITVEGRDVPKPVK+F DV FPDYVLQE+ +AGFVEPT IQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQE+ KFGASS+IK+TCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM++SHHTNLRRVTYLVLDEADRMLDMGF+PQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGS DLKANHAIRQHV+I+SE+QKYNKLV+LLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAK+LI ILEEAGQKVSPELAAMGRGAPPPPSG 
Sbjct:    1 MSRYDSRSGDPTSYRDRRSDSGFGGSVRSSSSSR-----RDYDGGESPKKFDVDGLTPFEKNFYVESPSVASMSEREVEEYRQRREITVEGRDVPKPVKNFRDVGFPDYVLQEISRAGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSPDLKANHAIRQHVDIISENQKYNKLVRLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKDLITILEEAGQKVSPELAAMGRGAPPPPSGQ 483

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy TrEMBL
Match: A0A067FPA9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g010649mg PE=3 SV=1)

HSP 1 Score: 853.588 bits (2204), Expect = 0.000e+0
Identity = 448/483 (92.75%), Postives = 465/483 (96.27%), Query Frame = 1

Query:  205 MSRYDSRSGDPASYRDRRXXXXXXXXXXXXXXXXXXXXRKDYDAGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPP 1653
            MSRYDSRS DP+SYRDRRSDSGFGGAS+YG S R+ SS++DYD  E PRKLDLDGLTPFEKNFYVESPSVAAMSE EVEEYRQ+REITVEGRDVPKPVKSF DV FPDYV+QE+ KAGF EPT IQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQP LAPGDGPIVLVLAPTRELAVQIQQE+ KFGASS+IK+TCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDML+SH+TNLRRVTYLVLDEADRMLDMGFEPQI+KI+SQIRPDRQTLYWSATWPKEVE LARQ+LYNPYKVIIGS DLKANHAIRQHV+IVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELI ILEEAGQKVSPELAAMGRGAPP
Sbjct:    1 MSRYDSRSADPSSYRDRRSDSGFGGASSYGSSVRTSSSKRDYDGAESPRKLDLDGLTPFEKNFYVESPSVAAMSEREVEEYRQQREITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELITILEEAGQKVSPELAAMGRGAPP 483

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy TrEMBL
Match: A0A067FD83_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g010649mg PE=3 SV=1)

HSP 1 Score: 853.203 bits (2203), Expect = 0.000e+0
Identity = 448/483 (92.75%), Postives = 465/483 (96.27%), Query Frame = 1

Query:  205 MSRYDSRSGDPASYRDRRXXXXXXXXXXXXXXXXXXXXRKDYDAGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPP 1653
            MSRYDSRS DP+SYRDRRSDSGFGGAS+YG S R+ SS++DYD  E PRKLDLDGLTPFEKNFYVESPSVAAMSE EVEEYRQ+REITVEGRDVPKPVKSF DV FPDYV+QE+ KAGF EPT IQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQP LAPGDGPIVLVLAPTRELAVQIQQE+ KFGASS+IK+TCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDML+SH+TNLRRVTYLVLDEADRMLDMGFEPQI+KI+SQIRPDRQTLYWSATWPKEVE LARQ+LYNPYKVIIGS DLKANHAIRQHV+IVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELI ILEEAGQKVSPELAAMGRGAPP
Sbjct:    1 MSRYDSRSADPSSYRDRRSDSGFGGASSYGSSVRTSSSKRDYDGAESPRKLDLDGLTPFEKNFYVESPSVAAMSEREVEEYRQQREITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELITILEEAGQKVSPELAAMGRGAPP 483

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy TrEMBL
Match: V4SLM9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10025421mg PE=3 SV=1)

HSP 1 Score: 853.203 bits (2203), Expect = 0.000e+0
Identity = 448/483 (92.75%), Postives = 465/483 (96.27%), Query Frame = 1

Query:  205 MSRYDSRSGDPASYRDRRXXXXXXXXXXXXXXXXXXXXRKDYDAGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPP 1653
            MSRYDSRS DP+SYRDRRSDSGFGGAS+YG S R+ SS++DYD  E PRKLDLDGLTPFEKNFYVESPSVAAMSE EVEEYRQ+REITVEGRDVPKPVKSF DV FPDYV+QE+ KAGF EPT IQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQP LAPGDGPIVLVLAPTRELAVQIQQE+ KFGASS+IK+TCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDML+SH+TNLRRVTYLVLDEADRMLDMGFEPQI+KI+SQIRPDRQTLYWSATWPKEVE LARQ+LYNPYKVIIGS DLKANHAIRQHV+IVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELI ILEEAGQKVSPELAAMGRGAPP
Sbjct:    1 MSRYDSRSADPSSYRDRRSDSGFGGASSYGSSVRTSSSKRDYDGAESPRKLDLDGLTPFEKNFYVESPSVAAMSEREVEEYRQQREITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELITILEEAGQKVSPELAAMGRGAPP 483

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy TrEMBL
Match: V4UK76_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10025421mg PE=3 SV=1)

HSP 1 Score: 853.203 bits (2203), Expect = 0.000e+0
Identity = 448/483 (92.75%), Postives = 465/483 (96.27%), Query Frame = 1

Query:  205 MSRYDSRSGDPASYRDRRXXXXXXXXXXXXXXXXXXXXRKDYDAGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPP 1653
            MSRYDSRS DP+SYRDRRSDSGFGGAS+YG S R+ SS++DYD  E PRKLDLDGLTPFEKNFYVESPSVAAMSE EVEEYRQ+REITVEGRDVPKPVKSF DV FPDYV+QE+ KAGF EPT IQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQP LAPGDGPIVLVLAPTRELAVQIQQE+ KFGASS+IK+TCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDML+SH+TNLRRVTYLVLDEADRMLDMGFEPQI+KI+SQIRPDRQTLYWSATWPKEVE LARQ+LYNPYKVIIGS DLKANHAIRQHV+IVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELI ILEEAGQKVSPELAAMGRGAPP
Sbjct:    1 MSRYDSRSADPSSYRDRRSDSGFGGASSYGSSVRTSSSKRDYDGAESPRKLDLDGLTPFEKNFYVESPSVAAMSEREVEEYRQQREITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELITILEEAGQKVSPELAAMGRGAPP 483

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy TrEMBL
Match: A0A059AJL6_EUCGR (Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_J028691 PE=3 SV=1)

HSP 1 Score: 848.581 bits (2191), Expect = 0.000e+0
Identity = 442/485 (91.13%), Postives = 464/485 (95.67%), Query Frame = 1

Query:  205 MSRYDSRSGDPASYRDRRXXXXXXXXXXXXXXXXXXXXRKDYDAGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPP 1659
            MSRYDSRSGDPASYRDRRSDSGFGGAS+YG   R+ + RKDYD GE PR+ DLDGLTPFEKNFY+ESPSVAAM++ +VE+YR++REITVEG+DVPKPVKSF DV FPDYV+QE+ KAGFVEPT IQ+QGWPMALKGRDLIGIAETGSGKT+AYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEA KFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDML+SHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVE LARQFLYN YKVIIGS DLKANHAIRQ V+IV E++KYNKLV LLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELI+ILEEAGQKVSP+LAAMGR APPPP
Sbjct:    1 MSRYDSRSGDPASYRDRRSDSGFGGASSYGAPVRTSAGRKDYDGGESPRRTDLDGLTPFEKNFYIESPSVAAMTDKDVEDYRKRREITVEGQDVPKPVKSFEDVGFPDYVMQEIAKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTIAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEATKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEHLARQFLYNAYKVIIGSEDLKANHAIRQIVDIVPENKKYNKLVNLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELISILEEAGQKVSPDLAAMGRAAPPPP 485

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy TrEMBL
Match: I1KUU8_SOYBN (Uncharacterized protein OS=Glycine max PE=3 SV=1)

HSP 1 Score: 847.425 bits (2188), Expect = 0.000e+0
Identity = 440/507 (86.79%), Postives = 468/507 (92.31%), Query Frame = 1

Query:  205 MSRYDSRSGDPASYRDRRXXXXXXX-XXXXXXXXXXXXXRKDYD-AGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGKGYSGGRTWS 1719
            MSRYDSRSGDPASYRDRRSDSG G      G    S S+R+DYD  G P R L LDGL  FEKNFY+ESP+V AM++ EV EYRQ+REITVEGRD+PKPVK+F D  FP+YVLQE+ KAGF EPT IQ+QGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPIL PGDGPIVLVLAPTRELAVQIQQE  KFGASSRIK+TCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDML+S+HTNL+RVTYLVLDEADRMLDMGF+PQ+RKIVSQIRPDRQTLYWSATWPKEVEQLAR+FLYNPYKVIIGS+DLKANHAIRQ+V+IVSE QKY+KLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFK+GKSPIMTATDVAARGLDVKDVKYV+NYDFPGSLEDYVHRIGRTGRAGAKGTAYT+FTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSG  GF+DRG+GY   R WS
Sbjct:    1 MSRYDSRSGDPASYRDRRSDSGLGAPTGFGGSVQHSSSNRRDYDDGGSPKRNLSLDGLPHFEKNFYIESPAVRAMTDAEVNEYRQQREITVEGRDIPKPVKTFHDAGFPEYVLQEITKAGFTEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILNPGDGPIVLVLAPTRELAVQIQQETTKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESNHTNLQRVTYLVLDEADRMLDMGFDPQLRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYNPYKVIIGSSDLKANHAIRQYVDIVSEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVVNYDFPGSLEDYVHRIGRTGRAGAKGTAYTYFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGPRGFQDRGRGYGSSRPWS 507

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy TrEMBL
Match: A0A0B2PQG1_GLYSO (DEAD-box ATP-dependent RNA helicase 20 OS=Glycine soja GN=glysoja_023354 PE=3 SV=1)

HSP 1 Score: 847.425 bits (2188), Expect = 0.000e+0
Identity = 440/507 (86.79%), Postives = 468/507 (92.31%), Query Frame = 1

Query:  205 MSRYDSRSGDPASYRDRRXXXXXXX-XXXXXXXXXXXXXRKDYD-AGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGKGYSGGRTWS 1719
            MSRYDSRSGDPASYRDRRSDSG G      G    S S+R+DYD  G P R L LDGL  FEKNFY+ESP+V AM++ EV EYRQ+REITVEGRD+PKPVK+F D  FP+YVLQE+ KAGF EPT IQ+QGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPIL PGDGPIVLVLAPTRELAVQIQQE  KFGASSRIK+TCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDML+S+HTNL+RVTYLVLDEADRMLDMGF+PQ+RKIVSQIRPDRQTLYWSATWPKEVEQLAR+FLYNPYKVIIGS+DLKANHAIRQ+V+IVSE QKY+KLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFK+GKSPIMTATDVAARGLDVKDVKYV+NYDFPGSLEDYVHRIGRTGRAGAKGTAYT+FTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSG  GF+DRG+GY   R WS
Sbjct:    1 MSRYDSRSGDPASYRDRRSDSGLGAPTGFGGSVQHSSSNRRDYDDGGSPKRNLSLDGLPHFEKNFYIESPAVRAMTDAEVNEYRQQREITVEGRDIPKPVKTFHDAGFPEYVLQEITKAGFTEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILNPGDGPIVLVLAPTRELAVQIQQETTKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESNHTNLQRVTYLVLDEADRMLDMGFDPQLRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYNPYKVIIGSSDLKANHAIRQYVDIVSEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVVNYDFPGSLEDYVHRIGRTGRAGAKGTAYTYFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGPRGFQDRGRGYGSSRPWS 507

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy TrEMBL
Match: I1KGC5_SOYBN (Uncharacterized protein OS=Glycine max PE=3 SV=1)

HSP 1 Score: 846.269 bits (2185), Expect = 0.000e+0
Identity = 440/507 (86.79%), Postives = 468/507 (92.31%), Query Frame = 1

Query:  205 MSRYDSRSGDPASYRDRRXXXXXXX-XXXXXXXXXXXXXRKDYD-AGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGHGGFRDRGKGYSGGRTWS 1719
            MSRYDSRSGDP SYRDRRSDSG G      G    S S+R+DYD  G P R L LDGL  FEKNFYVESP+V AM++ EV EYRQ+REITVEGRD+PKPVKSF D  FP+YV++E+ KAGF EPT IQ+QGWPMALKGRDLIGIAETGSGKTLAYLLP+IVHVNAQPIL PGDGPIVLVLAPTRELAVQIQQEA KFGASSRIK+TCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDML+S+HTNL+RVTYLVLDEADRMLDMGF+PQ+RKIVSQIRPDRQTLYWSATWPKEVEQLAR+FLYNPYKVIIGS+DLKANHAIRQ+V+IVSE QKY+KLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFK+GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYT+FTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSG  GF+DRG+GY   R WS
Sbjct:    1 MSRYDSRSGDPTSYRDRRSDSGLGAPTGFGGSVQHSSSNRRDYDDGGSPKRNLSLDGLPHFEKNFYVESPAVRAMTDAEVNEYRQQREITVEGRDIPKPVKSFHDAGFPEYVMEEITKAGFTEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPSIVHVNAQPILNPGDGPIVLVLAPTRELAVQIQQEATKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESNHTNLQRVTYLVLDEADRMLDMGFDPQLRKIVSQIRPDRQTLYWSATWPKEVEQLARKFLYNPYKVIIGSSDLKANHAIRQYVDIVSEKQKYDKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTYFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPSGPRGFQDRGRGYGSSRPWS 507

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy TrEMBL
Match: A0A0A0LFT6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G848820 PE=3 SV=1)

HSP 1 Score: 843.958 bits (2179), Expect = 0.000e+0
Identity = 443/486 (91.15%), Postives = 465/486 (95.68%), Query Frame = 1

Query:  205 MSRYDSRSGDPASYRDRRXXXXXXXXXXXXXXXXXXXXRKDYDAGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGRGAPPPPS 1662
            MSRYDSRS DP SYRDRRSDSG+GG++ YGGS RS SS+ DY   E P+KLDLDGL  FEKNFY+E+PSVAAM+E EVEEYRQ+REITVEGRDVPKPVKSF DV FPDYV+QE+ KAGF EPT IQ+QGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPIL+PGDGPIVLVLAPTRELAVQIQQEA KFGASS+IKNTC+YGGVPKGPQVRDLQKGVEIVIATPGRLIDM++SHHTNLRRVTYLVLDEADRMLDMGF+PQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGS DLKANHAIRQHV+IVSE+QKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEF++GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELI ILEEAGQKVSPELAAMGRGAPPPPS
Sbjct:    1 MSRYDSRSSDPTSYRDRRSDSGYGGSTGYGGSVRSSSSKSDYYGSEAPKKLDLDGLPHFEKNFYIEAPSVAAMTEREVEEYRQRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFTEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAPTRELAVQIQQEATKFGASSKIKNTCVYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESHHTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIGILEEAGQKVSPELAAMGRGAPPPPS 486

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy Swiss-Prot
Match: DBP2_CANGA (ATP-dependent RNA helicase DBP2 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=DBP2 PE=3 SV=1)

HSP 1 Score: 567.385 bits (1461), Expect = 0.000e+0
Identity = 298/494 (60.32%), Postives = 363/494 (73.48%), Query Frame = 1

Query:  187 RTAAHKMSRYDSRSGDPASYRDRRXXXXXXXXXXXXXXXXXXXXRKDYDAGEPPRKL-------DLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDG--SRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGR 1641
            R A +  + Y+SR GD   +R  RS                   R  +D G  PR+L       +L  L PFEKNFYVE   V   S+ EV ++R++ E+T+ G D+PKP+ +F +  FPDYVL+EV   GF +PT+IQ QGWPMAL GRD++GIA TGSGKTL+Y LP IVH+NAQP+L+PGDGPIVLVLAPTRELAVQIQ+E +KFG SSRI+NTC+YGGVP+G Q+R+L +G EIVIATPGRLIDML++  TNL+RVTYLVLDEADRMLDMGFEPQIRKIV QIRPDRQTL WSATWPKEV+QLAR +L +P +V IGS +L A+H I Q V +VSE +K ++LVK L+       S+ILIF  TK+ CD+IT  LR DGWPAL+IHGDK Q ERDWVL+EF+ G SPIM ATDVAARG+DVK + +V+NYD PG++EDYVHRIGRTGRAGA GTA +FFT  N      LI+I+ EA Q +  EL    R
Sbjct:    4 RDALYNKTNYNSRGGD---FRGGRSSDRNDYNRDRNQGYSHGGLRGRHDDG--PRELIKPDWESELPNLPPFEKNFYVEHEVVRNRSDQEVAQFRKESEMTITGHDIPKPITTFDEAGFPDYVLKEVKAEGFDKPTSIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLSPGDGPIVLVLAPTRELAVQIQKECSKFGKSSRIRNTCVYGGVPRGQQIRELIRGAEIVIATPGRLIDMLEAGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQQLARDYLNDPIQVQIGSLELAASHNITQLVEVVSEFEKRDRLVKHLDTASQDKESKILIFASTKRTCDEITSYLRQDGWPALAIHGDKDQRERDWVLNEFRTGNSPIMVATDVAARGIDVKGINFVVNYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEDNKSLGASLISIMREAKQNIPEELMKYDR 492

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy Swiss-Prot
Match: DBP2_CANAL (ATP-dependent RNA helicase DBP2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=DBP2 PE=3 SV=2)

HSP 1 Score: 567.385 bits (1461), Expect = 0.000e+0
Identity = 282/432 (65.28%), Postives = 340/432 (78.70%), Query Frame = 1

Query:  352 KLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMD--GSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMGR 1641
            + DL+ L  FEKNFY E P VAA S+ ++E++R++ E+TV+G D+P P+ +F +  FPDYVLQEV   GF +PT IQ QGWPMAL GRD+IGIA TGSGKTL+Y LP+IVH+NAQP L  GDGPIVLVLAPTRELAVQIQ E +KFG SSRI+NTC+YGG PKGPQ+RDL +GVEI IATPGRLIDML++  TNL+RVTYLVLDEADRMLDMGFEPQIRKIV QIRPDRQTL WSATWPKEV+QL R +L +P +V IGS +L A+H I Q V ++ E  K ++LVK LE  ++   ++IL+F  TK+ CD+IT  LR DGWPAL+IHGDK Q ERDWVL EF+ GK+ IM ATDVAARG+DVK + +VINYD PG++EDYVHRIGRTGR GA GTA +FFT  N++   +L  I+ EA Q V PEL    R
Sbjct:   78 QWDLEQLPKFEKNFYSEHPDVAARSDRDIEQFRKENEMTVKGHDIPHPITTFDEAGFPDYVLQEVKDQGFPKPTPIQCQGWPMALSGRDMIGIAATGSGKTLSYCLPSIVHINAQPQLQYGDGPIVLVLAPTRELAVQIQTECSKFGKSSRIRNTCVYGGAPKGPQIRDLARGVEICIATPGRLIDMLEAGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQQLTRDYLNDPIQVTIGSLELAASHTITQLVEVIDEFSKRDRLVKHLESALNEKDNKILVFASTKRTCDEITTYLRSDGWPALAIHGDKEQNERDWVLDEFRKGKTSIMVATDVAARGIDVKGITHVINYDMPGNIEDYVHRIGRTGRGGASGTAISFFTEGNSKLGGDLCKIMREANQTVPPELQRFDR 509

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy Swiss-Prot
Match: DBP2_CRYNJ (ATP-dependent RNA helicase DBP2-A OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=DBP2 PE=3 SV=1)

HSP 1 Score: 564.688 bits (1454), Expect = 0.000e+0
Identity = 275/424 (64.86%), Postives = 347/424 (81.84%), Query Frame = 1

Query:  370 LTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDI-MDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMG 1638
            L  FEKNFYV+ P V A S+ EVE +R ++E+ ++G++VP+P+ +F +  FPDY++ E+ + GF  P++IQ Q WPMAL GRDL+ IAETGSGKT+++ LPA+VH+NAQP+LAPGDGPIVL+LAPTRELAVQIQ EA KFG SSRI+NT IYGG PKGPQ+RDLQ+GVEI +ATPGRLIDML++  TNL+RVTYLV+DEADRMLDMGFEPQIRKIVSQIRPDRQTL +SATWPKEV++LA  FL++  +V IGS DL ANH + QHV + ++  K +KL+  LE I  +  ++LIF+ TK+  D +T+ LRMDGWPAL+IHGDK QAERDWVL+EFK+G+SPIM ATDVA+RGLDV+D+ YVINYDFP + EDY+HRIGRTGRAG KGT+YT+FT  N++ A+EL+ IL E+   + PEL  M 
Sbjct:   67 LAKFEKNFYVQDPRVTARSDAEVEAFRAEKEMKIQGKNVPRPITTFEEAGFPDYIMSEIRRMGFTAPSSIQCQAWPMALSGRDLVAIAETGSGKTISFCLPAMVHINAQPLLAPGDGPIVLILAPTRELAVQIQTEATKFGQSSRIRNTAIYGGAPKGPQIRDLQRGVEICVATPGRLIDMLETGKTNLKRVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLLFSATWPKEVQRLAMDFLHDFIQVNIGSLDLTANHNVAQHVEVCTDFDKRSKLLSHLEKISQENGKVLIFVATKRVADDLTKFLRMDGWPALAIHGDKQQAERDWVLAEFKSGRSPIMLATDVASRGLDVRDIGYVINYDFPNNCEDYIHRIGRTGRAGRKGTSYTYFTMDNSKAARELVQILRESKADIPPELEEMA 490

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy Swiss-Prot
Match: DBP2_CRYNB (ATP-dependent RNA helicase DBP2-A OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=DBP2 PE=3 SV=1)

HSP 1 Score: 564.688 bits (1454), Expect = 0.000e+0
Identity = 275/424 (64.86%), Postives = 347/424 (81.84%), Query Frame = 1

Query:  370 LTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDI-MDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAMG 1638
            L  FEKNFYV+ P V A S+ EVE +R ++E+ ++G++VP+P+ +F +  FPDY++ E+ + GF  P++IQ Q WPMAL GRDL+ IAETGSGKT+++ LPA+VH+NAQP+LAPGDGPIVL+LAPTRELAVQIQ EA KFG SSRI+NT IYGG PKGPQ+RDLQ+GVEI +ATPGRLIDML++  TNL+RVTYLV+DEADRMLDMGFEPQIRKIVSQIRPDRQTL +SATWPKEV++LA  FL++  +V IGS DL ANH + QHV + ++  K +KL+  LE I  +  ++LIF+ TK+  D +T+ LRMDGWPAL+IHGDK QAERDWVL+EFK+G+SPIM ATDVA+RGLDV+D+ YVINYDFP + EDY+HRIGRTGRAG KGT+YT+FT  N++ A+EL+ IL E+   + PEL  M 
Sbjct:   67 LAKFEKNFYVQDPRVTARSDAEVEAFRAEKEMKIQGKNVPRPITTFEEAGFPDYIMSEIRRMGFTAPSSIQCQAWPMALSGRDLVAIAETGSGKTISFCLPAMVHINAQPLLAPGDGPIVLILAPTRELAVQIQTEATKFGQSSRIRNTAIYGGAPKGPQIRDLQRGVEICVATPGRLIDMLETGKTNLKRVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLLFSATWPKEVQRLAMDFLHDFIQVNIGSLDLTANHNVAQHVEVCTDFDKRSKLLSHLEKISQENGKVLIFVATKRVADDLTKFLRMDGWPALAIHGDKQQAERDWVLAEFKSGRSPIMLATDVASRGLDVRDIGYVINYDFPNNCEDYIHRIGRTGRAGRKGTSYTYFTMDNSKAARELVQILRESKADIPPELEEMA 490

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy Swiss-Prot
Match: DBP2_GIBZE (ATP-dependent RNA helicase DBP2 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=DBP2 PE=3 SV=1)

HSP 1 Score: 561.992 bits (1447), Expect = 0.000e+0
Identity = 279/436 (63.99%), Postives = 349/436 (80.05%), Query Frame = 1

Query:  334 AGEPPRKLDLDGLTPFEKNFYVESPSVAAMSEMEVEEYRQKREITVEGRDVPKPVKSFADVRFPDYVLQEVMKAGFVEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLDSHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSADLKANHAIRQHVNIVSESQKYNKLVKLLEDIMDG--SRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHXXXXXXXXXXXXXXXXFFTAANARFAKELIAILEEAGQKVSPELAAM 1635
            +G   ++ D++ L  FEK+FY E P V   S+ +VE +R+K ++T+ G +VPKPV++F +  FP YV+ EV   GF  PTAIQ+QGWPMAL GRD++GIAETGSGKTL Y LP+IVH+NAQP+LAPGDGPIVLVLAPTRELAVQIQ+E  KFG SSRI+NTC+YGGVPKGPQ+RDL +GVE+ IATPGRLIDML++  TNLRRVTYLVLDEADRMLDMGFEPQIRKI+ QIRPDRQTL WSATWPKEV  LA  FL +  +V IGS +L ANH I Q V +V+E +K ++++K +E +M+   ++ILIF+ TK+  D+ITR LR DGWPALSIHGDK Q ERDWVL +FK GKSPIM ATDVA+RG+DV+++ +V+NYD+P + EDY+HRIGRTGRAGA GTA T FT  N + A++L+ +L+EA Q++ P L  M
Sbjct:   79 SGLKNQEWDINSLPKFEKSFYKEHPDVETRSDADVEAFRRKHQMTIAGSNVPKPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPSIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQEEMKKFGRSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTLMWSATWPKEVRALASDFLQDFIQVNIGSMELAANHRITQIVEVVTEMEKRDRMIKHMEKVMENKENKILIFVGTKRVADEITRFLRQDGWPALSIHGDKQQNERDWVLDQFKTGKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRAGAMGTAITLFTTDNQKQARDLVNVLQEAKQQIDPRLVEM 514

The following BLAST results are available for this feature:

BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy TrEMBL
BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy Swiss-Prot

BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
W9RUL7_9ROSA	0.000e+0	90.98	DEAD-box ATP-dependent RNA helicase 20 OS=Morus no...	[more]
A0A067FPA9_CITSI	0.000e+0	92.75	Uncharacterized protein OS=Citrus sinensis GN=CISI...	[more]
A0A067FD83_CITSI	0.000e+0	92.75	Uncharacterized protein OS=Citrus sinensis GN=CISI...	[more]
V4SLM9_9ROSI	0.000e+0	92.75	Uncharacterized protein OS=Citrus clementina GN=CI...	[more]
V4UK76_9ROSI	0.000e+0	92.75	Uncharacterized protein OS=Citrus clementina GN=CI...	[more]
A0A059AJL6_EUCGR	0.000e+0	91.13	Uncharacterized protein (Fragment) OS=Eucalyptus g...	[more]
I1KUU8_SOYBN	0.000e+0	86.79	Uncharacterized protein OS=Glycine max PE=3 SV=1	[more]
A0A0B2PQG1_GLYSO	0.000e+0	86.79	DEAD-box ATP-dependent RNA helicase 20 OS=Glycine ...	[more]
I1KGC5_SOYBN	0.000e+0	86.79	Uncharacterized protein OS=Glycine max PE=3 SV=1	[more]
A0A0A0LFT6_CUCSA	0.000e+0	91.15	Uncharacterized protein OS=Cucumis sativus GN=Csa_...	[more]

Pages

BLAST of g.arboreum_cottongen_reftransV1_0013834 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
DBP2_CANGA	0.000e+0	60.32	ATP-dependent RNA helicase DBP2 OS=Candida glabrat...	[more]
DBP2_CANAL	0.000e+0	65.28	ATP-dependent RNA helicase DBP2 OS=Candida albican...	[more]
DBP2_CRYNJ	0.000e+0	64.86	ATP-dependent RNA helicase DBP2-A OS=Cryptococcus ...	[more]
DBP2_CRYNB	0.000e+0	64.86	ATP-dependent RNA helicase DBP2-A OS=Cryptococcus ...	[more]
DBP2_GIBZE	0.000e+0	63.99	ATP-dependent RNA helicase DBP2 OS=Gibberella zeae...	[more]

Pages

InterPro

Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 118..321 e-value: 2.4E-68 score: 243.0
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 130..305 score: 33.408
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 358..439 e-value: 4.8E-34 score: 129.1
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 330..439 e-value: 1.5E-29 score: 102.4
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 333..478 score: 23.963
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 321..476 e-value: 9.9E-60 score: 200.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 80..320 e-value: 2.3E-91 score: 304.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 171..454
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 123..294 e-value: 4.2E-49 score: 166.5
None	No IPR available	PANTHER	PTHR24031	RNA HELICASE	coord: 7..477
None	No IPR available	PANTHER	PTHR24031:SF219	ATP-DEPENDENT RNA HELICASE DDX5-RELATED	coord: 7..477
IPR000629	ATP-dependent RNA helicase DEAD-box, conserved site	PROSITE	PS00039	DEAD_ATP_HELICASE	coord: 251..259
IPR014014	RNA helicase, DEAD-box type, Q motif	PROSITE	PS51195	Q_MOTIF	coord: 99..127 score: 10.209

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.arboreum_cottongen_reftransV1_0013834 ID=g.arboreum_cottongen_reftransV1_0013834; Name=g.arboreum_cottongen_reftransV1_0013834; organism=Gossypium arboreum; type=contig; length=1987bp
GGAAAATTTTTCCCTTTCTCTTAACTTCTTTTCCTCCCAATTGAAACCAA
AAAGGAGAGGGACAAAGCTCCATCGAGTAAAACCCTGACACATAAAAACC
CTAATTAATTAGAACAAGGCCAAACGATAACACGAATTCTTTTTTTCGGT
TACATTGACATTTATATTAACTTTTGATCATTTCTACGGACAGCAGCACA
TAAAATGAGTAGATATGATAGCCGCTCCGGCGATCCTGCCTCCTACCGTG
ACCGTAGAAGTGACTCAGGGTTTGGTGGGGCTTCAGCATATGGTGGTTCA
GGGCGGTCCTTGTCAAGCAGAAAGGACTATGATGCTGGTGAACCACCTAG
GAAGTTGGATTTGGATGGCTTGACACCATTTGAAAAGAATTTTTATGTTG
AGTCTCCTTCTGTGGCAGCAATGTCTGAGATGGAGGTGGAGGAATATCGA
CAGAAGAGGGAAATTACGGTTGAAGGTCGTGATGTTCCAAAGCCTGTGAA
GAGTTTTGCTGATGTGAGATTTCCAGACTATGTACTGCAAGAAGTCATGA
AAGCAGGGTTTGTTGAACCAACAGCCATACAAGCTCAAGGCTGGCCAATG
GCTTTAAAGGGCCGTGATCTTATTGGTATTGCTGAAACAGGATCAGGGAA
GACCCTTGCCTATTTATTGCCTGCAATTGTTCACGTCAACGCACAACCAA
TTTTAGCTCCTGGAGATGGTCCAATTGTATTAGTATTAGCTCCCACACGT
GAACTTGCAGTTCAAATACAACAGGAGGCTGCTAAGTTTGGTGCGTCATC
AAGGATCAAGAATACATGCATATATGGTGGGGTTCCAAAGGGACCTCAAG
TGCGTGATCTCCAGAAAGGTGTTGAGATTGTTATTGCTACACCAGGAAGG
TTAATAGATATGTTGGATTCACATCACACAAATCTGCGAAGAGTTACTTA
TTTAGTCTTGGATGAGGCAGATCGGATGTTAGACATGGGGTTTGAGCCTC
AGATACGAAAAATTGTTTCTCAGATACGTCCTGATCGTCAAACTTTATAC
TGGAGTGCAACTTGGCCAAAGGAGGTTGAACAATTGGCAAGGCAGTTTCT
TTACAATCCGTACAAAGTGATAATTGGATCTGCGGATTTAAAAGCTAACC
ATGCAATTCGCCAACATGTTAACATTGTTTCAGAGAGTCAGAAATATAAC
AAATTGGTGAAGCTGCTCGAGGATATCATGGATGGCAGCAGAATTTTGAT
TTTCATGGATACCAAGAAGGGTTGTGACCAAATCACTAGGCAACTTCGCA
TGGATGGTTGGCCTGCTCTGTCAATTCATGGAGATAAAAGTCAAGCAGAA
AGGGATTGGGTCCTTTCAGAGTTTAAAGCTGGCAAGAGCCCTATAATGAC
TGCAACAGATGTTGCAGCTCGTGGTTTAGATGTGAAAGATGTGAAGTATG
TAATCAATTATGACTTCCCGGGATCTCTCGAGGATTATGTCCATCGCATT
GGTCGAACAGGGAGGGCTGGGGCAAAAGGAACAGCCTATACTTTCTTCAC
AGCTGCAAATGCAAGATTTGCCAAAGAACTTATTGCCATACTTGAGGAAG
CTGGCCAGAAGGTCAGTCCTGAATTGGCAGCAATGGGACGCGGTGCACCT
CCTCCCCCATCAGGTCATGGTGGTTTTCGAGACCGAGGTAAGGGATACAG
TGGCGGTCGCACATGGAGCTGATTAACAGAAAGATCCCTGTTCCCCAGAA
GAGGAAAATTAGAAAGACTATGAGGGTACAGTGTAGTGTAGACATACTTT
GTTTAACTGTCACTACCCGCAGGAAGGGCAAGTAGATGGGGAACTTGTAA
ATTGACAGTGTATGTACTCCCAGATTAAAAGTCCGATTCCCCCTTAAGCA
ATGAGAACTCAACTCGTGAATGAAAAACAAAACAAAAATGAGTTGCATTT
TTCCACTTCATTCCAAAGCTGATCATGTTTTTTTTTT

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR014001	Helicase_ATP-bd
IPR001650	Helicase_C-like
IPR027417	P-loop_NTPase
IPR011545	DEAD/DEAH_box_helicase_dom
IPR000629	RNA-helicase_DEAD-box_CS
IPR014014	RNA_helicase_DEAD_Q_motif

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0005524	ATP binding

Search form

g.arboreum_cottongen_reftransV1_0013834, g.arboreum_cottongen_reftransV1_0013834 (contig) Gossypium arboreum

Pages

Pages