g.arboreum_cottongen_reftransV1_0013641, g.arboreum_cottongen_reftransV1_0013641 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0013641
Unique Nameg.arboreum_cottongen_reftransV1_0013641
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length2146
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr10chromosomeg.arboreum_cottongen_reftransV1_0013641:1..2146 .
Chr10:32082330..32087719 +
Homology
BLAST of g.arboreum_cottongen_reftransV1_0013641 vs. ExPASy TrEMBL
Match: A0A068UXX7_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_74 OS=Coffea canephora GN=GSCOC_T00038125001 PE=4 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 1.618e-77
Identity = 153/327 (46.79%), Postives = 212/327 (64.83%), Query Frame = 3
Query: 1023 AKENLKFSEECLQAISNNDVEDNVVPIVVRPGHIRFEPLEEENAEQANQYSQISVKTFQWNGITSKKKGQKWGMEK-TFLKRND-NSFSHVSSEMVDVNDKATVTNDMDFDKLMPYSSLPKEGDLVAYRLVELSSTWTPELCSFRVGEISHYNAESNRIMLTPVPGYPNAFEKKTDEEASELPDTSLYGEDGSLEIDYSSLIDVRLVKLGILNATIAIADDNNEKYAQNQDVLTRQP------------NGSKEANSVSAASPAQANGAVNVWEEINQALSAKKAELSKEDGWSRADSSGRSAWSFRALRRSALGPTMAFLRAQNGI 1961
            A +N   SE+  Q  S   ++D VVPIV+RPGHIRFEPLE + AE  NQ   +S ++FQWNGITSK+KGQKWG EK +F +RND N+ +      +       +   +DF+KL   S +PK GD++AYRL+ELSSTWTPE+  FRVG +S  +++S++++L PVPGYP    K  DEE  + PD SLY EDGSLEI +++LIDVR+VK G   +T A+  + N   A  ++     P             GS EAN     S + +    N+WE++++AL+AKK ELS+ + W +A SSG+S+WS+RAL+ SALGPTMA LR++N +
Sbjct:  380 ATQNGSASEQSNQKKS---LDDEVVPIVIRPGHIRFEPLENDQAEAQNQ---VSEESFQWNGITSKRKGQKWGTEKNSFSRRNDYNNANRDRPVTLSAPKDVHLNGPIDFEKLPLLSYMPKVGDVIAYRLLELSSTWTPEISPFRVGYVSWCSSKSDKLILMPVPGYP-VTTKNADEEPDKQPDDSLYKEDGSLEIGFATLIDVRVVKDGHEGSTEAVTGEANGGPAATENATVSDPPANNETQIDAPAPGSGEANCGKQKSASGSENGGNIWEQLSEALNAKKEELSQGNSWDKA-SSGKSSWSYRALKGSALGPTMALLRSKNKL 698          

HSP 2 Score: 174.096 bits (440), Expect = 1.061e-42
Identity = 100/197 (50.76%), Postives = 128/197 (64.97%), Query Frame = 3
Query:   72 METARLRLVFEDP-NILSKSQKQQGLKRSWFILKPQH-QTIFDLSSDLLHIFDLQKSCPNGLILSMDGFVLPPFEPTCILKDKDIVSVKMKGGKSTEIIKAGNGMNYLEELETMERLPVNTGVKHLANEEFDKETGGYKSELEEDEQELAPLEDR----------------AQVEST----PIENMVSKKRKARDKL 596
            MET RLRL F D   ILS+SQK +GL+R W +LKP H +TI DL++ +LH F LQ SCP+GL+L MDG+VLP FE T ILKDKD++SV  KG   T  I+  N +N + E+E +E+ PVNTG   LANEEF+KETGGY+S+  EDE E A  +D+                 Q+E++      EN  SKKRKA +KL
Sbjct:    1 METTRLRLEFTDKEGILSQSQKSEGLQRCWLLLKPHHHKTIADLAAYILHAFQLQPSCPHGLLLYMDGYVLPGFESTTILKDKDVISVMKKG--LTLAIRGTNPINLVAEMEAVEQQPVNTGALLLANEEFEKETGGYQSDEPEDESERAEGDDKEEARDVTEEAEDEVREEQLENSLHNPSQENATSKKRKAPEKL 195          
BLAST of g.arboreum_cottongen_reftransV1_0013641 vs. ExPASy TrEMBL
Match: I1LNF9_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 2.463e-77
Identity = 165/348 (47.41%), Postives = 230/348 (66.09%), Query Frame = 3
Query:  993 LLGKDDEKSPAKEN-LKFSEECLQAISNNDVEDNVVPIVVRPGHIRFEPLEEENAEQANQYSQISVKTFQWNGITSKKKGQKWGMEKTFLKRNDNSFSHVSSEMVDVN--DKATVTNDMDFDKLMPY-SSLPKEGDLVAYRLVELSSTWTPELCSFRVGEISHYNAESNRIMLTPVPGYPNAFEKKTDEEASELP-DTSLYGEDGSLEIDYSSLIDVRLVKLGILN-ATIAIADDNNEKYAQNQDVLTRQPNGSKEAN------------SVSAASP------AQANGAVNVWEEINQALSAKKAELSKEDGWSR-ADSSGRSAWSFRALRRSALGPTMAFLRAQNGI 1961
            +L KD ++ P K+N    S+   +    +  ED++VP+ +RPGHIRFEPL+++  +QA    Q  V+ FQWNGIT+KKKGQKWG E+   ++ D  + H S +   V   +K   +N +DFDKL PY +SLPKEGD++AYRL+EL+++WTPEL SFRVG+IS Y+A+SNRI L PV  YP  F+KK DE+AS +  + S Y E+GSLEI+Y+SL DVR+VK G  +  T+ ++ D   K  +  + +T++   +K  N            ++ +  P      A+ NG VNVW+EIN+AL AKKA+LSKEDGWSR  +SS   +WS RA+R SALGPTMA LR+ NG+
Sbjct:  292 VLEKDGQELPIKDNNCVVSDVHQKPDEESGEEDDIVPVEIRPGHIRFEPLKKDQ-DQAVTQDQFPVEIFQWNGITNKKKGQKWGKERMSFRKQDG-YEHSSQDCPTVRNAEKEQPSNAIDFDKLKPYYTSLPKEGDVIAYRLIELTASWTPELSSFRVGKISRYDAKSNRIWLEPVLEYPFDFKKKIDEDASSVQYNPSPYQENGSLEIEYTSLADVRMVKHGNPDLKTVVVSSDAWVKTTKATNDITKEKLAAKATNGSTDEKLAADQTTMGSCQPERGHITAKENGEVNVWDEINEALKAKKAKLSKEDGWSRGGESSSTRSWSHRAMRCSALGPTMALLRSNNGL 637          

HSP 2 Score: 145.206 bits (365), Expect = 4.273e-33
Identity = 83/164 (50.61%), Postives = 107/164 (65.24%), Query Frame = 3
Query:   75 ETARLRLVFEDPNILSKSQKQQGLKRSWFILKPQHQTIFDLSSDLLHIFDLQKSCPNGLILSMDGFVLPPFEPTCILKDKDIVSVKMKGGKSTEIIKAGNGMNYLEELETMERLPVNTGVKHLANEEFDKETGGYKSELEEDEQELAPLEDRAQVESTPIENMV 566
            ET RLR+VFED  +LSKS+K+QGLKR WF+LKPQH  I D++S LL+ F L ++CP+G++LSMDGFVLP FE TCILKDKDIV VK KG  ST+  K         E +++E LP    ++ L  E   +ET  +K   + D+Q    LED   VES    N+V
Sbjct:    3 ETVRLRVVFEDRGMLSKSKKKQGLKRCWFLLKPQHTAISDVASHLLNTFRLHRTCPHGIVLSMDGFVLPSFESTCILKDKDIVCVKRKGSVSTDDNKPAMLPPAACENQSIE-LPKLLTIEGLQEESGGEETMSHK---DGDDQ----LEDAVYVESESDRNVV 158          
BLAST of g.arboreum_cottongen_reftransV1_0013641 vs. ExPASy TrEMBL
Match: A0A0B2SCB2_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_014417 PE=4 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 2.463e-77
Identity = 165/348 (47.41%), Postives = 230/348 (66.09%), Query Frame = 3
Query:  993 LLGKDDEKSPAKEN-LKFSEECLQAISNNDVEDNVVPIVVRPGHIRFEPLEEENAEQANQYSQISVKTFQWNGITSKKKGQKWGMEKTFLKRNDNSFSHVSSEMVDVN--DKATVTNDMDFDKLMPY-SSLPKEGDLVAYRLVELSSTWTPELCSFRVGEISHYNAESNRIMLTPVPGYPNAFEKKTDEEASELP-DTSLYGEDGSLEIDYSSLIDVRLVKLGILN-ATIAIADDNNEKYAQNQDVLTRQPNGSKEAN------------SVSAASP------AQANGAVNVWEEINQALSAKKAELSKEDGWSR-ADSSGRSAWSFRALRRSALGPTMAFLRAQNGI 1961
            +L KD ++ P K+N    S+   +    +  ED++VP+ +RPGHIRFEPL+++  +QA    Q  V+ FQWNGIT+KKKGQKWG E+   ++ D  + H S +   V   +K   +N +DFDKL PY +SLPKEGD++AYRL+EL+++WTPEL SFRVG+IS Y+A+SNRI L PV  YP  F+KK DE+AS +  + S Y E+GSLEI+Y+SL DVR+VK G  +  T+ ++ D   K  +  + +T++   +K  N            ++ +  P      A+ NG VNVW+EIN+AL AKKA+LSKEDGWSR  +SS   +WS RA+R SALGPTMA LR+ NG+
Sbjct:  292 VLEKDGQELPIKDNNCVVSDVHQKPDEESGEEDDIVPVEIRPGHIRFEPLKKDQ-DQAVTQDQFPVEIFQWNGITNKKKGQKWGKERMSFRKQDG-YEHSSQDCPTVRNAEKEQPSNAIDFDKLKPYYTSLPKEGDVIAYRLIELTASWTPELSSFRVGKISRYDAKSNRIWLEPVLEYPFDFKKKIDEDASSVQYNPSPYQENGSLEIEYTSLADVRMVKHGNPDLKTVVVSSDAWVKTTKATNDITKEKLAAKATNGSTDEKLAADQTTMGSCQPERGHITAKENGEVNVWDEINEALKAKKAKLSKEDGWSRGGESSSTRSWSHRAMRCSALGPTMALLRSNNGL 637          

HSP 2 Score: 145.206 bits (365), Expect = 4.273e-33
Identity = 83/164 (50.61%), Postives = 107/164 (65.24%), Query Frame = 3
Query:   75 ETARLRLVFEDPNILSKSQKQQGLKRSWFILKPQHQTIFDLSSDLLHIFDLQKSCPNGLILSMDGFVLPPFEPTCILKDKDIVSVKMKGGKSTEIIKAGNGMNYLEELETMERLPVNTGVKHLANEEFDKETGGYKSELEEDEQELAPLEDRAQVESTPIENMV 566
            ET RLR+VFED  +LSKS+K+QGLKR WF+LKPQH  I D++S LL+ F L ++CP+G++LSMDGFVLP FE TCILKDKDIV VK KG  ST+  K         E +++E LP    ++ L  E   +ET  +K   + D+Q    LED   VES    N+V
Sbjct:    3 ETVRLRVVFEDRGMLSKSKKKQGLKRCWFLLKPQHTAISDVASHLLNTFRLHRTCPHGIVLSMDGFVLPSFESTCILKDKDIVCVKRKGSVSTDDNKPAMLPPAACENQSIE-LPKLLTIEGLQEESGGEETMSHK---DGDDQ----LEDAVYVESESDRNVV 158          
BLAST of g.arboreum_cottongen_reftransV1_0013641 vs. ExPASy TrEMBL
Match: A0A0A0KTI4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G598010 PE=4 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 1.204e-75
Identity = 140/277 (50.54%), Postives = 189/277 (68.23%), Query Frame = 3
Query: 1152 AEQANQYSQ--ISVKTFQWNGITSKKKGQKWGMEKT--FLKRNDNSFS----HVSSEMVDVNDKATVTNDMDFDKLMPYSSLPKEGDLVAYRLVELSSTWTPELCSFRVGEISHYNAESNRIMLTPVPGYPNAFEKKTDEEASELPDTSLYGEDGSLEIDYSSLIDVRLVKLGILNATIAIADDNNEKYAQNQDVLTRQ-PNGSKEA-NSVSAASPAQANGAVNVWEEINQALSAKKAELSKEDGWSRADSSGRSAWSFRALRRSALGPTMAFLRAQ 1952
             +QA Q  Q     +T  WNGIT+KKKGQKWG EKT  + + N N  S     + SE         V   + FD+L PY+ LP+EGDL+AYRL+ELSSTWTPE+ SFR G++S Y+ ESNRIML PVP YP   +K+ DE++   PDT+ YGEDGSL+ID++SL+D+R+++ G L+++         + A NQ++ ++Q    SK   N+V A +  Q NG V+ W+EI++ALSAKK ELSK +GW++ DSSGR +WS+RALR SALGPTMA LR+Q
Sbjct:  272 TDQAGQEKQNHFPKETLHWNGITNKKKGQKWGKEKTPSWKRNNSNDCSSEPLQLLSETEQPKTPVPVVGSIHFDELPPYTCLPQEGDLIAYRLIELSSTWTPEISSFRAGKVSWYDTESNRIMLIPVPEYPLPVKKEIDEDSELQPDTTPYGEDGSLKIDFASLVDLRIIRQGNLDSS---------RTAVNQEITSKQIAESSKHVHNNVDANNTRQGNGKVSAWDEISEALSAKKVELSKNNGWNQEDSSGRKSWSYRALRGSALGPTMALLRSQ 539          

HSP 2 Score: 166.777 bits (421), Expect = 7.410e-41
Identity = 91/171 (53.22%), Postives = 114/171 (66.67%), Query Frame = 3
Query:   72 METARLRLVFEDPNILSKSQKQQGLKRSWFILKPQHQTIFDLSSDLLHIFDLQKSCPNGLILSMDGFVLPPFEPTCILKDKDIVSVKMKGGKSTEIIKAGNGMNYLEELETMERLPVNTGVKHLANEEFDKETGGYKSELEEDEQELAPLEDRAQVESTPIENMVSKKRKA 584
            ME  RLR+ F+D ++L+ S    GL RSW +LKP  +TI DLSS +L IF L  +CPNG+ILSMDGFVLPPFE  CILKDKDIV VK K  K+T +   G G   +E  E  ER PV+ GVK LA++EF+ E+ GY+S+ EEDE          QV++ P+   VSKKRKA
Sbjct:    2 MEAVRLRVSFKDKDLLTDSL--TGLSRSWIVLKPHLRTISDLSSYILSIFCLHDACPNGVILSMDGFVLPPFESVCILKDKDIVRVKKKKSKATIL---GGGNRLIETEEFRERKPVDKGVKLLADKEFENESNGYESQSEEDEANAT-----LQVKAVPVGKKVSKKRKA 162          
BLAST of g.arboreum_cottongen_reftransV1_0013641 vs. ExPASy TrEMBL
Match: M0TWQ4_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 6.737e-71
Identity = 133/296 (44.93%), Postives = 199/296 (67.23%), Query Frame = 3
Query: 1077 DVEDNVVPIVVRPGHIRFEPLEEENAEQANQYSQISVKTFQWNGITSKKKGQKWGMEKTFLKRNDNSFSHVS-SEMVDVNDKATVTNDMDFDKLMPYSSLPKEGDLVAYRLVELSSTWTPELCSFRVGEISHYNAESNRIMLTPVPGYP-NAFEKKTDEEASELPDTSLYGEDGSLEIDYSSLIDVRLVKLGILNATIAIADDNNEKYAQNQDVLTRQPNGSKEANSVSAASPAQANGAVNVWEEINQALSAKKAELSKEDGWSRADSSGRSAWSFRALRRSALGPTMAFLRAQNG 1958
            ++E+ +VP++VRPGHIRFEP++  + E  N  S   V+T QWNG TSKKKGQKWG EKT  K++D+ + + + +E +   +   V + ++F+ L P + LP+EGD++ YRLVELSS+W PEL SFRVG++S Y++ S +I+L P+P YP ++ EKK  EE+++ PD++LY EDGSLEI+Y+SL+DVRL+K G  +  +       +  + N D+         +AN   +A+P   +     W++I+QALS +KA+L + D W+    S  ++WS+RALR SALGPT+A LR  NG
Sbjct:  321 EIEEEIVPVIVRPGHIRFEPIDG-DGEHDNTQSNGPVETLQWNGTTSKKKGQKWGREKTLSKKSDDDYCNGAFNENMITEEGEHVDDHINFESLFPLTRLPEEGDILVYRLVELSSSWCPELSSFRVGKVSSYDSISMKIVLLPIPEYPISSQEKKDAEESAQEPDSTLYKEDGSLEIEYTSLVDVRLLK-GHDSDNLHNEKSKEKAQSNNWDL------ALVDANPRHSAAPLVESRPTMGWDQIDQALSERKAQLQQTDTWA-IKGSTTASWSYRALRGSALGPTLALLRGTNG 607          

HSP 2 Score: 122.479 bits (306), Expect = 1.036e-25
Identity = 65/175 (37.14%), Postives = 111/175 (63.43%), Query Frame = 3
Query:   72 META-RLRLVFEDPNILSKSQKQQGLKRSWFILKPQHQTIFDLSSDLLHIFDLQKSCPNGLILSMDGFVLPPFEPTCILKDKDIVSVKMKGGKSTEIIKAGNGMNYLEELETMERLPVNTGVKHLANEEFDKETGGYKSELEEDEQELAPLEDRAQVESTPIENMVSKKRKARDK 593
            ME A RLR+ F+D  +L+K+Q+ +GL R W +L P+  T+ D+++ L+  F L  SCP+G++LSMD FVLPPFE + I +DKDIV VK K  K+ ++++      ++++ + +E+ P+ +G + L  ++F ++    KS+  ED  E+     + Q+ S+  E ++ +KRK  DK
Sbjct:    1 MEDAVRLRVEFDDHRVLTKTQRLEGLCRCWLLLPPELSTVSDVATHLVRAFALHLSCPHGVLLSMDEFVLPPFESSSIFRDKDIVRVKKKVAKTKQLLEICGDAYHIQDSKIVEKQPITSGNELLNIKDFHEDLELCKSKKGEDACEVEGNTTKRQILSSE-ETILKRKRKQSDK 174          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0013641 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A068UXX7_COFCA1.618e-7746.79Coffea canephora DH200=94 genomic scaffold, scaffo... [more]
I1LNF9_SOYBN2.463e-7747.41Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
A0A0B2SCB2_GLYSO2.463e-7747.41Uncharacterized protein OS=Glycine soja GN=glysoja... [more]
A0A0A0KTI4_CUCSA1.204e-7550.54Uncharacterized protein OS=Cucumis sativus GN=Csa_... [more]
M0TWQ4_MUSAM6.737e-7144.93Uncharacterized protein OS=Musa acuminata subsp. m... [more]

Pages

back to top
BLAST of g.arboreum_cottongen_reftransV1_0013641 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 573..593
NoneNo IPR availablePANTHERPTHR15197COILIN P80coord: 1..630
IPR031722Coilin, N-terminal domainPFAMPF15862Coilin_Ncoord: 5..192
e-value: 2.1E-17
score: 63.1
IPR024822CoilinPANTHERPTHR15197:SF0COILINcoord: 1..630

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0013641 ID=g.arboreum_cottongen_reftransV1_0013641; Name=g.arboreum_cottongen_reftransV1_0013641; organism=Gossypium arboreum; type=contig; length=2146bp
ATGAAACGAAACGAAGGCCAAATAACAAAGTTCACCTTTGGGTTTTCTTC
AAATTTCCTCAGACTTCGAAAATGGAGACGGCAAGGCTCCGTTTGGTGTT
CGAGGATCCGAACATTCTCAGCAAGTCTCAGAAGCAACAAGGCCTAAAGC
GAAGCTGGTTTATCCTTAAACCCCAACATCAAACCATCTTCGATCTTTCC
TCCGATCTTCTCCACATTTTCGACCTCCAAAAGTCTTGCCCTAATGGCCT
CATACTCTCCATGGATGGCTTTGTTTTGCCACCTTTCGAGCCAACTTGTA
TTTTAAAAGATAAAGATATTGTCAGTGTGAAGATGAAAGGAGGGAAATCG
ACCGAGATTATTAAGGCTGGAAATGGTATGAATTATTTGGAAGAATTGGA
AACAATGGAGCGACTGCCCGTTAATACCGGCGTCAAGCATCTAGCCAATG
AGGAGTTTGATAAGGAAACCGGGGGATACAAAAGCGAACTGGAAGAAGAT
GAGCAAGAACTTGCGCCATTGGAGGATCGAGCACAAGTTGAAAGCACACC
AATTGAAAACATGGTTTCAAAGAAAAGAAAGGCACGGGATAAACTTCCGA
GCTCTAGGAAGAAGAAAAGCAAATTGGCTACTGCTAAAAAATATCCGGTT
TCTGGAGATGATGGAATTGATGTTCGTCCAAGGAAAAGCAAAAGCTCTCA
TAAAAAAAAGGTTTCCACCAATGACAAGGTTGTTGGTAAGGACAAGCCAG
CTGACATTCAGGGAGAACCAGAGAATTCAAGCAGCCCTGAAATTGATGAA
ACTGGTGATAACAAAACCAATCTGGGGAGGTCCTCCCAGCTTCAAAACAC
TGGTAAAGGGAGTGCTGATGAACTTATTACAACTACTGAAGTTAAAAAGC
TCCCTAGCAGAAGTGCCCGACGTAAAAAGGCTAAAAGGCGATGGTTGAGG
GAGCAGGCCAAACTTGTAAAGGAAAAGCTGCAGTCAAAAGAGCTGCTGGG
AAAAGATGATGAGAAATCACCTGCAAAAGAAAATCTCAAATTTTCGGAAG
AATGTCTACAAGCAATTAGCAATAATGATGTTGAGGATAACGTGGTTCCA
ATAGTAGTAAGGCCAGGACATATTCGCTTTGAGCCCCTTGAAGAAGAAAA
TGCTGAGCAAGCTAACCAATACAGTCAAATTTCAGTGAAAACCTTTCAAT
GGAATGGAATAACCAGCAAGAAGAAGGGTCAAAAATGGGGTATGGAGAAA
ACTTTTCTGAAAAGGAATGATAACAGTTTTAGCCATGTGAGTTCAGAAAT
GGTGGATGTTAACGATAAGGCCACTGTAACTAATGACATGGACTTTGACA
AGCTTATGCCCTATTCTAGCTTGCCTAAGGAGGGAGATTTAGTTGCATAT
CGCTTAGTTGAGCTATCTTCAACTTGGACCCCTGAGCTTTGCTCCTTCCG
GGTTGGAGAAATATCACATTATAATGCTGAATCCAACAGGATTATGCTGA
CACCAGTGCCAGGATATCCAAATGCCTTTGAGAAGAAAACAGATGAGGAG
GCTTCTGAACTACCAGATACATCTCTTTACGGAGAAGATGGGTCGTTAGA
GATAGATTATTCCTCTCTAATTGATGTCCGCCTCGTCAAGCTTGGCATTT
TGAATGCCACAATAGCAATTGCTGATGACAACAATGAAAAGTATGCACAA
AATCAAGATGTTTTAACAAGACAACCAAATGGCAGCAAGGAAGCAAACAG
TGTCTCAGCTGCATCTCCTGCACAAGCTAATGGTGCGGTCAATGTATGGG
AAGAAATTAACCAGGCTTTGAGTGCAAAGAAGGCTGAGCTCTCTAAAGAG
GATGGTTGGAGTCGAGCAGATAGTTCAGGTAGGAGCGCCTGGTCTTTTCG
GGCTCTCAGACGCAGTGCTCTTGGCCCAACTATGGCCTTCTTAAGAGCAC
AGAATGGGATCTGAGGAATGGCACCAGCATCAGTTTTAAGTGTAGTCTCT
CAATGTTTTTGAACCTCTGAAAGACGAGAGCAAGGCAATTTTGTTTTGGC
TTTTGCTTTGTCAAGTACACAAAATTTTCAAGTGTCGTCCAAAGTTAACG
TCTTTTTTGTAGCATGCGAAGCCGGTTTTCACTTGTTTTACTACAG
back to top
Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR031722Coilin_N
IPR024822Coilin