g.arboreum_cottongen_reftransV1_0013641, g.arboreum_cottongen_reftransV1_0013641 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0013641 vs. ExPASy TrEMBL
Match: A0A059B115_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H02474 PE=4 SV=1) HSP 1 Score: 451.825 bits (1161), Expect = 9.434e-146 Identity = 295/658 (44.83%), Postives = 405/658 (61.55%), Query Frame = 3 Query: 72 METARLRLVFEDPNILSKSQKQQGLKRSWFILKPQHQTIFDLSSDLLHIFDLQKSCPNGLILSMDGFVLPPFEPTCILKDKDIVSVKMKGGKSTEIIKAGNGMNYLEELETMERLPVNTGVKHLANEEFDKETGGYKSELEEDE--QELAPLEDRAQVESTPIENMVSKKRKARDKLPXXXXXXXXXXXXXXYPVSGDDGIDVRPRXXXXXXXXXXXTNDKVVGKDKPADIQGEPENSSSPEIDETGDNKTNLGRSSQLQNTGKG-SADELITTTEVXXXXXXXXXXXXXXXXXXXEQAKLVKEKLQSKEL------LGKDDEKSPAKENLKFSEEC---------------LQAISNNDVEDNVVPIVVRPGHIRFEPLEEENAEQANQYSQIS-VKTFQWNGITSKKKGQKWGMEK--TFLKRNDNSFSHVSSEMVDVNDKATVTNDMDFDKLMPYSSLPKEGDLVAYRLVELSSTWTPELCSFRVGEISHYNAESNRIMLTPVPGYPNAFEKKTDEEASELPDTSLYGEDGSLEIDYSSLIDVRLVKLGILNAT-IAIADDNNEKYAQNQDVLTRQPNGSKEANSVSAASPAQANGAVNVWEEINQALSAKKAELSKEDGWSRADSSGRSAWSFRALRRSALGPTMAFLRAQNGI 1961 M+ R+RL F+D +LSK Q+++GL RSW +L+P H TI DL++ +++ FDL SCPNGL+LSMDG+VLPPFE T ILKDKDIV VK K G S + IK + + LEE+E +E+ PV TG+K LANEEF KE GGY+SE EEDE Q L + E T N+VSKKRKA KL S++KKSKL+ + V G ID P + + + +D K + Q P+ S + E + T T +S Q +N G A + + ++ +R + K+ R +R+ + EK + ++L LGK + P K+ +FS+E L + N+ +++VP+V+RPGHIRFEPL EE+ +Q Q SQ+S ++TF+WNGITSKKKGQKWG EK ++ ++ + + SS + +V ++ +T+ D DKL PY P+EGD+VAYR++ELSS+W PEL SFRVG+IS Y+ SN+I+L PV Y E D SLY EDGSLE+D+SSLIDVR+VK G N+ E A +Q+ + NGS + + P +ANG V+VWEEI++ALSAKKA+LS++D W+ SSGRS+WSFRALR SALGPTMA LRAQNG+ Sbjct: 1 MDGVRVRLWFDDRRVLSKPQRKEGLNRSWVLLQPHHSTIADLAAHVVNAFDLWDSCPNGLVLSMDGYVLPPFESTSILKDKDIVGVKKKQGTSRDTIKLCDVEDALEEIEFVEKQPVQTGLKLLANEEFVKEAGGYESESEEDEHGQSHGSLNE----EDTSNNNVVSKKRKASKKLGGSKRKKSKLSGVECPKVPG-SVIDDTPVEKEILQNDGATIDD-----SKSSSGQATPDKSITHEDEVT---ITPAAKSQQQENDGGSEGATDTPSKPKLPSRSARRKKAKRRWLREMRQIGQKEVEKNEYRQLPNKKQSLGKKYRQLPGKKESEFSKEHEQQHQSQTFTQEHQPLNHVYENNTNEDIVPVVIRPGHIRFEPL-EEDVDQDVQKSQVSLLQTFEWNGITSKKKGQKWGKEKAGSWQWTDNKNLNQESSLVTNVVAESPLTDLGDIDKLPPYGLSPQEGDIVAYRVIELSSSWCPELTSFRVGKISSYHQRSNKILLVPVGEYALDLEN---------IDKSLYKEDGSLEVDFSSLIDVRIVKYGKSNSVEQGTGAGGVEVAAGDQNA---KSNGSTDNIGEATPGPTKANGKVDVWEEISEALSAKKAQLSQQDNWTMKQSSGRSSWSFRALRGSALGPTMALLRAQNGV 632
BLAST of g.arboreum_cottongen_reftransV1_0013641 vs. ExPASy TrEMBL
Match: W9RCG4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_027672 PE=4 SV=1) HSP 1 Score: 452.595 bits (1163), Expect = 1.233e-145 Identity = 306/656 (46.65%), Postives = 415/656 (63.26%), Query Frame = 3 Query: 84 RLRLVFEDPNILSKSQKQQGLKRSWFILKPQHQTIFDLSSDLLHIFDLQKSCPNGLILSMDGFVLPPFEPTCILKDKDIVSVKMKGG-KSTEIIKAGNGMNYLEELETMERLPVNTGVKHLANEEFDKETGGY----------KSE------LEEDEQELAPLEDRA-QVESTPIENMVSKKRKARDKLPXXXXXXXXXXXXXXYPVSG---DDGIDVRPRXXXXXXXXXXXTNDKVVGKDKPADIQGEPENSSSPEIDETGDN----KTNLGRSSQLQNTGKGSADELITTTEVXXXXXXXXXXXXXXXXXXXEQAKLVKEKLQSKELLGKDDEKSPAKENLKFSEECLQAISNNDVED-NVVPIVVRPGHIRFEPLEEENAEQANQYSQISVKTFQWNGITSKKKGQKWGMEKT-FLKRNDNSFSHV-SSEMVDVNDKATVTNDMDFDKLMPYSSLPKEGDLVAYRLVELSSTWTPELCSFRVGEISHYNAESNRIMLTPVPGYPNAFEKKTDEEASELPDTSLYGEDGSLEIDYSSLIDVRLVKLGILNATIAIADDNNEKYAQNQD--VLTRQPNGSKEANSVSAASPAQANGAVNVWEEINQALSAKKAELSKEDGWSRADSSGRSAWSFRALRRSALGPTMAFLRAQNGI 1961 RLRLVFED +L+KSQ+ +GLKRSW +LKP H+TI +++ LL +FD+ +C +GL+LSMDGFVLPPFE T ILKDKDI+ VK K G ST+II G+G E E E G+K LA EEF +ETGGY KSE E E+++ + +A Q++++ + VS KRKA KL S +K + +A SG D ++ P+K +SSH+ + + V DK D GE + S+ E DE +N + RS + Q GK S T +KK PSRS RRK+AKR+WL E+AK + +L +L D+E+S AK+N E + +D ED +VVP+VVRPGHIRFE + +A+Q + +IS++ FQWNGITSK+KGQKWG EKT F KR+D + SSEM+ + ++ V +DF+KL P +SLP+EGD VAYRL+ELS +WTPEL FRVG+IS Y+ +S+RI L VP YP FE++ DE ++ P+TS+Y EDGSLE+DYSSL+DVR++K G ++A ++ ++ + +Q +RQ KE A+P Q NG VNVW+EI +ALSAKKA+LS+ED W++ S +WSFRALR ALGPTMA LRAQN I Sbjct: 6 RLRLVFEDCKMLTKSQRMEGLKRSWVLLKPHHETISEVADHLLRVFDIDDACSDGLVLSMDGFVLPPFESTSILKDKDIIRVKKKKGPSSTDIIGVGDGRKSFEVEEVAEEQDAVPGMKLLATEEFARETGGYESESEEEEPAKSEDLHIDNTPEPEKKVVSKKRKALQLDNSLEKKEVSNKRKASKKLKRSNDRKKRKKSATVEECSGTPEDVQNEIPPKKDESSHQHILLLENSPVKNDKSPDTDGELDYLSTTESDERTNNINVTTPSEKRSCEPQENGKKSVASSHTHDGIKKGPSRSTRRKRAKRQWLIERAKKKENELHQTKLQKTDNEQSSAKDNCITEEH--KKRDKSDYEDGDVVPVVVRPGHIRFESSGKVDADQPVRQPEISMENFQWNGITSKRKGQKWGKEKTGFHKRSDQKRRNQDSSEMMIIEEETNVIGHVDFNKLKPCTSLPQEGDTVAYRLIELSPSWTPELSFFRVGKISKYDPKSDRITLVQVPEYPIVFEEQGDEASAAKPETSIYKEDGSLEVDYSSLVDVRIIKHGNVSAAKSVTAGVSQVASGDQGGASCSRQ-KSYKEPKGKEPAAPRQENGKVNVWDEICEALSAKKAQLSQEDNWTKKGGSSSGSWSFRALRGGALGPTMARLRAQNEI 658
BLAST of g.arboreum_cottongen_reftransV1_0013641 vs. ExPASy TrEMBL
Match: A0A067K4G9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17837 PE=4 SV=1) HSP 1 Score: 444.121 bits (1141), Expect = 5.719e-143 Identity = 300/658 (45.59%), Postives = 403/658 (61.25%), Query Frame = 3 Query: 72 METARLRLVFEDPNILSKSQKQQGLKRSWFILKPQHQTIFDLSSDLLHIFDLQKSCPNGLILSMDGFVLPPFEPTCILKDKDIVSVKMKGGKSTEIIKAGNGMNYLEELETMERLPVNTGVKHLANEEFDKETGGYKSELEEDEQELAPLEDRAQVESTPIENMVSKKRKARDKLPXXXXXXXXXXXXXXYPVSGDDGIDVRPRXXXXXXXXXXXTNDKVVGKDKPADIQGEPENSSSPEIDETGDNKTNLGRSSQL---QNTGKGSADELITTTEVXXXXXXXXXXXXXXXXXXXEQAKLVKEKLQSKELLGKDDEKS------------------------PAKENLKFSEECLQAISNNDVEDNVVPIVVRPGHIRFEPLEEENAEQANQYSQISVKTFQWNGITSKKKGQKWGMEK-TFLKRND-NSFSHVSSEMVDVNDKATVTNDMDFDKLMPYSSLPKEGDLVAYRLVELSSTWTPELCSFRVGEISHYNAESNRIMLTPVPGYPNAFEKKT-DEEASELPDTSLYGEDGSLEIDYSSLIDVRLVKLGILNATIAIADDNNEKYAQNQDVLTRQPNGSKEANSVSAASPAQANGAVNVWEEINQALSAKKAELSKEDGWSRADSSGRSAWSFRALRRSALGPTMAFLRAQN 1955 MET RLRL F+ +LSKSQK LKR W +LKPQH+TI DLS LLH FDLQ PNGL+LSM+GF LPPFE T ILKDKDI+ V+ G STEI+ G+G+N LE +E +E PV G+ LANEEF+KE+GGY+SE EDE + +ED VE++P V+KKRKA +L S ++KK + ++ +K ++ ++ N K G S+ ++DE + L + +L Q G GS D T + KKLPSRSARRKKAKR +LR + K +E+LQ ++L K DE+S P +E K E+ Q + D E++VVPIV+RPGHIRFEPL + QA + +QI ++TF+WNGITSKKKGQKWG EK T K ND + + S+M+++ + V + ++F+KL Y++LPKEGD++AYRL++LSS+WTPEL S+ VG+IS Y E NR+ L PVP YP E++ D+ + L + DGSL ID+SSL +VRL+ G L + ++A + +QD N S N + Q NGAV+ WE+INQAL+AKKAELS+ED W++ +SSGR WS++ALR SALGPTMA LRAQN Sbjct: 1 METVRLRLEFD--QVLSKSQKSLNLKRCWILLKPQHRTISDLSDYLLHAFDLQNDFPNGLLLSMEGFALPPFESTSILKDKDIIRVEKNGSVSTEIVMVGDGVNSLEVVEIVETQPVVAGMNLLANEEFEKESGGYQSEEVEDEPK--QVEDAVHVENSPEVKTVTKKRKASKELKSPKRKKKRSSSNEKRVLAVEE-------------------NGKQNG------------TLSAAKVDERIKSSQALPTAKRLSQHQENGNGSVDASPTPDQTKKLPSRSARRKKAKRIYLRRKLKAEREELQRRQLHVKSDEQSSEEDSQGFSQESDEEGNREVSEQMPERETNKLEEDPQQPDQDGDEEEDVVPIVIRPGHIRFEPLSTVGSNQAVEQNQIPLETFRWNGITSKKKGQKWGKEKITSWKGNDYKNVNQECSKMLNIEARH-VHDRINFEKLEYYTTLPKEGDVIAYRLLKLSSSWTPELSSYGVGKISRYEIEKNRVGLVPVPKYPMIPEEEMGDDTSGGLSEAYPCARDGSLWIDFSSLCEVRLISQGNLKSVKSVAAGVD---GGDQD------NRSNLRNDNENHASVQENGAVDAWEQINQALNAKKAELSQEDNWNKTESSGRRPWSYKALRGSALGPTMALLRAQN 613
BLAST of g.arboreum_cottongen_reftransV1_0013641 vs. ExPASy TrEMBL
Match: V4TIJ0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030867mg PE=4 SV=1) HSP 1 Score: 433.335 bits (1113), Expect = 9.757e-138 Identity = 318/703 (45.23%), Postives = 428/703 (60.88%), Query Frame = 3 Query: 72 METARLRLVFEDPNILSKSQKQQGLKRSWFILKPQH-QTIFDLSSDLLHIFDLQKSCPNGLILSMDGFVLPPFEPTCILKDKDIVSVKMKGGKSTEIIKAGNGMNYLEELETMERLPVNTGVKHLANEEFDKETGGYKSELEEDEQELAPLEDRAQVESTPIENMVSKKRKARDKLPXXXXXXXXXXXXXXYPVSGDDGIDVRPRXXXXXXXXXXXTNDKVVGKDKPADIQGEPENSSSPEIDETGDNKT----NLGRSSQLQNTGKGSADELITTTEVXXXXXXXXXXXXXXXXXXXEQAKLVKEKLQSKELLGK--------------DDEKSP-----AKENLKFSEECLQAISNNDVEDNVVPIVVRPGHIRFEPLEEENAEQANQYSQISVKTFQWNGITSKKKGQKWGMEKT-FLKRNDNSFSHVSSEMVDVNDKATVTNDMDFDKLMPYSSLPKEGDLVAYRLVELSSTWTPELCSFRVGEISHYNAESNRIMLTPVPGYPNAFEKKTDEEASELPDTSLYGEDGSLEIDYSSLIDVRLVKLGILNATIAIADDN-----NEKYAQNQDVLTR---------------------------QPNG-----------SKEANSVSAASPA--QANGAVNVWEEINQALSAKKAELSKEDGWSRADSSGRSA---WSFRALRRSALGPTMAFLRAQNGI 1961 ME R+R+VFE +ILS++QK++GLK+SW + KP+H +TI DL+ LL IF L S P+GL+LSMDGFVLPPFE T + KD D+V V+ K S+E+I G + L+ ++ +++ PV TG+K LANEEF +E G SE EED+ E +E TP N SKKRKA KL S++KKSKL+TA++ PV +D +V + S + ++ KDK +D+QG E +PE+ ET + + + R SQLQ GKG+ D T KK PSRSARRKKAKR+WLREQAK+ K +L K+L K D+ + P K+N + S+ C Q N D +D+VVP+V+RPGHIRFEPL + + Q Q +Q ++T+QWNGITSKKKGQKWG +K F K++ SEM + ++ DM+F+KL PY SLPKEGD++AYRL+EL+S+WTPE SFRVG+IS Y++++N+I+L PVP YP AFEKKTDE L +LYGEDGSL+ID+S L+DVR++K G + + D + NE + +QDV+ Q NG + NS SPA Q NG +N WEEIN ALSAKKAELS D S + S +S+ S++ALR SALGPTMAFLR++NG+ Sbjct: 2 MEKVRVRVVFEGQHILSEAQKKEGLKKSWILFKPKHLKTISDLADYLLRIFHLHHSSPHGLVLSMDGFVLPPFESTAVFKDNDVVCVRRKREASSELITLDGGADALDAVQIVKQ-PVQTGLKLLANEEFYQEKGSRDSESEEDDHEKG-------LEQTPDVNKSSKKRKASKKLQGSKRKKSKLSTAEETPVVFEDVQNV-----CEVKSGRSSRDRSLLKKDKSSDVQGNQEKWRTPELGETSNCISKCVPDAKRFSQLQENGKGNVDVSSTPVGTKKFPSRSARRKKAKRQWLREQAKIEKMELHQKQLNSKVILQSPNKDGQILSDEHQQPDPVSQGKDNKRLSDGCQQPGPNGDADDDVVPVVIRPGHIRFEPLGKVDDIQTVQQNQTPLETYQWNGITSKKKGQKWGRDKAAFSKKSIYENFDQFSEMPSFEKEISIGKDMEFEKLPPYISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKILLAPVPEYPLAFEKKTDENVPALQSETLYGEDGSLKIDFSLLLDVRIIKHGEKANEVHVGDQDFVTNFNEVHLGDQDVVMNFNVHVGDRDVVMNLRDDRKHGKAHAPAQGNGEVRLGDQDAVSNVRDNSNKEKSPAHTQENGKLNAWEEINLALSAKKAELSHVDDQSAKERSKQSSGHRLSYKALRSSALGPTMAFLRSENGL 691
BLAST of g.arboreum_cottongen_reftransV1_0013641 vs. ExPASy TrEMBL
Match: V4VG05_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030867mg PE=4 SV=1) HSP 1 Score: 430.254 bits (1105), Expect = 1.385e-136 Identity = 318/703 (45.23%), Postives = 428/703 (60.88%), Query Frame = 3 Query: 72 METARLRLVFEDPNILSKSQKQQGLKRSWFILKPQH-QTIFDLSSDLLHIFDLQKSCPNGLILSMDGFVLPPFEPTCILKDKDIVSVKMKGGKSTEIIKAGNGMNYLEELETMERLPVNTGVKHLANEEFDKETGGYKSELEEDEQELAPLEDRAQVESTPIENMVSKKRKARDKLPXXXXXXXXXXXXXXYPVSGDDGIDVRPRXXXXXXXXXXXTNDKVVGKDKPADIQGEPENSSSPEIDETGDNKT----NLGRSSQLQNTGKGSADELITTTEVXXXXXXXXXXXXXXXXXXXEQAKLVKEKLQSKELLGK--------------DDEKSP-----AKENLKFSEECLQAISNNDVEDNVVPIVVRPGHIRFEPLEEENAEQANQYSQISVKTFQWNGITSKKKGQKWGMEKT-FLKRNDNSFSHVSSEMVDVNDKATVTNDMDFDKLMPYSSLPKEGDLVAYRLVELSSTWTPELCSFRVGEISHYNAESNRIMLTPVPGYPNAFEKKTDEEASELPDTSLYGEDGSLEIDYSSLIDVRLVKLGILNATIAIADDN-----NEKYAQNQDVLTR---------------------------QPNG-----------SKEANSVSAASPA--QANGAVNVWEEINQALSAKKAELSKEDGWSRADSSGRSA---WSFRALRRSALGPTMAFLRAQNGI 1961 ME R+R+VFE +ILS++QK++GLK+SW + KP+H +TI DL+ LL IF L S P+GL+LSMDGFVLPPFE T + KD D+V V+ K S+E+I G + L+ ++ +++ PV TG+K LANEEF +E G SE EED+ E +E TP N SKKRKA KL S++KKSKL+TA++ PV +D +V + S + ++ KDK +D+QG E +PE+ ET + + + R SQLQ GKG+ D T KK PSRSARRKKAKR+WLREQAK+ K +L K+L K D+ + P K+N + S+ C Q N D +D+VVP+V+RPGHIRFEPL ++ Q Q +Q ++T+QWNGITSKKKGQKWG +K F K++ SEM + ++ DM+F+KL PY SLPKEGD++AYRL+EL+S+WTPE SFRVG+IS Y++++N+I+L PVP YP AFEKKTDE L +LYGEDGSL+ID+S L+DVR++K G + + D + NE + +QDV+ Q NG + NS SPA Q NG +N WEEIN ALSAKKAELS D S + S +S+ S++ALR SALGPTMAFLR++NG+ Sbjct: 2 MEKVRVRVVFEGQHILSEAQKKEGLKKSWILFKPKHLKTISDLADYLLRIFHLHHSSPHGLVLSMDGFVLPPFESTAVFKDNDVVCVRRKREASSELITLDGGADALDAVQIVKQ-PVQTGLKLLANEEFYQEKGSRDSESEEDDHEKG-------LEQTPDVNKSSKKRKASKKLQGSKRKKSKLSTAEETPVVFEDVQNV-----CEVKSGRSSRDRSLLKKDKSSDVQGNQEKWRTPELGETSNCISKCVPDAKRFSQLQENGKGNVDVSSTPVGTKKFPSRSARRKKAKRQWLREQAKIEKMELHQKQLNSKVILQSPNKDGQILSDEHQQPDPVSQGKDNKRLSDGCQQPGPNGDADDDVVPVVIRPGHIRFEPLVDDI--QTVQQNQTPLETYQWNGITSKKKGQKWGRDKAAFSKKSIYENFDQFSEMPSFEKEISIGKDMEFEKLPPYISLPKEGDVIAYRLIELTSSWTPEPSSFRVGKISWYDSDTNKILLAPVPEYPLAFEKKTDENVPALQSETLYGEDGSLKIDFSLLLDVRIIKHGEKANEVHVGDQDFVTNFNEVHLGDQDVVMNFNVHVGDRDVVMNLRDDRKHGKAHAPAQGNGEVRLGDQDAVSNVRDNSNKEKSPAHTQENGKLNAWEEINLALSAKKAELSHVDDQSAKERSKQSSGHRLSYKALRSSALGPTMAFLRSENGL 689
BLAST of g.arboreum_cottongen_reftransV1_0013641 vs. ExPASy TrEMBL
Match: A0A059B224_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H02474 PE=4 SV=1) HSP 1 Score: 333.954 bits (855), Expect = 9.669e-102 Identity = 229/538 (42.57%), Postives = 320/538 (59.48%), Query Frame = 3 Query: 72 METARLRLVFEDPNILSKSQKQQGLKRSWFILKPQHQTIFDLSSDLLHIFDLQKSCPNGLILSMDGFVLPPFEPTCILKDKDIVSVKMKGGKSTEIIKAGNGMNYLEELETMERLPVNTGVKHLANEEFDKETGGYKSELEEDE--QELAPLEDRAQVESTPIENMVSKKRKARDKLPXXXXXXXXXXXXXXYPVSGDDGIDVRPRXXXXXXXXXXXTNDKVVGKDKPADIQGEPENSSSPEIDETGDNKTNLGRSSQLQNTG--KGSAD-----ELITTTEVXXXXXXXXXXXXXXXXXXXEQAKLVKEKLQSKELLGKDDEKSPAKENLKFSEEC---------------LQAISNNDVEDNVVPIVVRPGHIRFEPLEEENAEQANQYSQIS-VKTFQWNGITSKKKGQKWGMEK--TFLKRNDNSFSHVSSEMVDVNDKATVTNDMDFDKLMPYSSLPKEGDLVAYRLVELSSTWTPELCSFRVGEISHYNAESNRIMLTPVPGYPNAFEKKTDEEASELPDTSLYGEDGSLEI 1604 M+ R+RL F+D +LSK Q+++GL RSW +L+P H TI DL++ +++ FDL SCPNGL+LSMDG+VLPPFE T ILKDKDIV VK K G S + IK + + LEE+E +E+ PV TG+K LANEEF KE GGY+SE EEDE Q L + E T N+VSKKRKA KL S++KKSKL+ + V G ID P + + + +D K + Q P+ S + E + T T +S Q +N G +G+ D +L + + +K R R+ + + ++ K+ LGK + P K+ +FS+E L + N+ +++VP+V+RPGHIRFEPL EE+ +Q Q SQ+S ++TF+WNGITSKKKGQKWG EK ++ ++ + + SS + +V ++ +T+ D DKL PY P+EGD+VAYR++ELSS+W PEL SFRVG+IS Y+ SN+I+L PV Y E D SLY EDGSLE+ Sbjct: 1 MDGVRVRLWFDDRRVLSKPQRKEGLNRSWVLLQPHHSTIADLAAHVVNAFDLWDSCPNGLVLSMDGYVLPPFESTSILKDKDIVGVKKKQGTSRDTIKLCDVEDALEEIEFVEKQPVQTGLKLLANEEFVKEAGGYESESEEDEHGQSHGSLNE----EDTSNNNVVSKKRKASKKLGGSKRKKSKLSGVECPKVPG-SVIDDTPVEKEILQNDGATIDD-----SKSSSGQATPDKSITHEDEVT---ITPAAKSQQQENDGGSEGATDTPSKPKLPSRSARRKKAKRRWLREMRQIGQKEVEKNEYRQLPNKKQSLGKKYRQLPGKKESEFSKEHEQQHQSQTFTQEHQPLNHVYENNTNEDIVPVVIRPGHIRFEPL-EEDVDQDVQKSQVSLLQTFEWNGITSKKKGQKWGKEKAGSWQWTDNKNLNQESSLVTNVVAESPLTDLGDIDKLPPYGLSPQEGDIVAYRVIELSSSWCPELTSFRVGKISSYHQRSNKILLVPVGEYALDLEN---------IDKSLYKEDGSLEV 515
BLAST of g.arboreum_cottongen_reftransV1_0013641 vs. ExPASy TrEMBL
Match: B9HLF5_POPTR (Sphere organelles family protein OS=Populus trichocarpa GN=POPTR_0008s18890g PE=4 SV=1) HSP 1 Score: 308.145 bits (788), Expect = 1.769e-92 Identity = 172/325 (52.92%), Postives = 225/325 (69.23%), Query Frame = 3 Query: 1011 EKSPAKENLKFSEECLQ-----AISNNDVEDNVVPIVVRPGHIRFEPLEEENAEQANQYSQISVKTFQWNGITSKKKGQKWGMEKTF-LKRND-NSFSHVSSEMVDVNDKATVTNDMDFDKLMPYSSLPKEGDLVAYRLVELSSTWTPELCSFRVGEISHYNAESNRIMLTPVPGYPNAFEKKTDEEASELPDTSLYGEDGSLEIDYSSLIDVRLVKLGILNATIAIADDNNEKYAQNQDVLTR-QPNGSKEANSVSAASPAQANGAVNVWEEINQALSAKKAELSKEDGWSRADSSGRSAWSFRALRRSALGPTMAFLRAQNGI 1961 EKSP + K SEE L+ ++DVE +VVPIV+RPGHIRFEPL++ +QA + I ++F WNGITSKKKGQKWG EK KRND N+F SS + + ++ V + +F++L Y+SLPKEGD++AYR+VELS +WTPEL S+RVG+IS Y+ ESN ++L VPGYP EK DE ++ LP+TS YGEDGSLEI +S+L +VRLV+ G L + +I +NE + ++QD T PN + EAN + AQ N N WEEINQAL+AKK LS+EDGW + +SS RS WS++ALR S+LG TMA LRAQN I Sbjct: 160 EKSPELGSHKLSEEKLREDNQLGEQDSDVEGDVVPIVIRPGHIRFEPLKKGGDDQAVLQNHIPTESFHWNGITSKKKGQKWGKEKAVSCKRNDYNNFRKESSSSLSIEEQTPVYDCTNFEELPLYASLPKEGDVIAYRVVELSLSWTPELSSYRVGKISKYDLESNIVILVQVPGYPVVPEKIDDEASAALPETSPYGEDGSLEIKFSTLHEVRLVRHGNLESAKSIVSGSNEVHVRDQDSGTGFSPNNNHEAN-----TSAQENEKRNPWEEINQALTAKKELLSQEDGWKKTESSSRSPWSYKALRGSSLGRTMALLRAQNEI 479
BLAST of g.arboreum_cottongen_reftransV1_0013641 vs. ExPASy TrEMBL
Match: U5G1G5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s05870g PE=4 SV=1) HSP 1 Score: 295.819 bits (756), Expect = 6.461e-87 Identity = 170/358 (47.49%), Postives = 233/358 (65.08%), Query Frame = 3 Query: 951 EQAKLVKEKLQSKELLGKDDEKSPAKENL------------KFSEECLQ-----AISNNDVEDNVVPIVVRPGHIRFEPLEEE----NAEQANQYSQISVKTFQWNGITSKKKGQKWGMEKTF-LKRND-NSFSHVSSEMVDVNDKATVTNDMDFDKLMPYSSLPKEGDLVAYRLVELSSTWTPELCSFRVGEISHYNAESNRIMLTPVPGYPNAFEKKTDEEASELPDTSLYGEDGSLEIDYSSLIDVRLVKLGILNATIAIADDNNEKYAQNQDVLTRQPNGSKEANSVSAASPAQANGAVNVWEEINQALSAKKAELSKEDGWSRADSSGRSAWSFRALRRSALGPTMAFLRAQN 1955 EQ K K+ +ELL +++S K+N K SEE L+ ++DVE +VVP+V+RPGHIRFEPL++ +++ A + +S++ FQWNGITSKKKGQKWG EK KRND N+F S + + ++ V + +F++ Y+SLPKEGD++AYRLVELSS+WTPEL S+RVG++S Y+ ESN +ML VP YP EK DE + LP+TS Y +DGSLEI +S+L +VRLV G + + ++ +NE + ++QD T G K N+ A + AQ NG N WEE NQAL+A+KA LS+ED + +SSGRS WS++ALR SALGPT+A LRAQN Sbjct: 199 EQLKAEKKAQNKRELLLNINQQSSEKDNQNVSGESPEPGSQKTSEEKLREDNQLGERDSDVEGDVVPVVIRPGHIRFEPLKKGLMLGDSDHAVPQNHVSIERFQWNGITSKKKGQKWGKEKVVSCKRNDYNNFKKESYSSLTIEEQTPVYDCTNFEEFPLYASLPKEGDVIAYRLVELSSSWTPELSSYRVGKVSKYDLESNIVMLAQVPEYPVIPEKIDDEASDALPETSPYQDDGSLEIKFSALFEVRLVHHGNIKSAKSVTGGSNEVHVRDQDSGT----GFKLNNNHEAGTSAQENGKHNPWEETNQALTAQKAWLSQEDSCKKPESSGRSPWSYKALRGSALGPTVALLRAQN 552 HSP 2 Score: 170.629 bits (431), Expect = 4.719e-42 Identity = 94/172 (54.65%), Postives = 120/172 (69.77%), Query Frame = 3 Query: 72 METARLRLVFEDPNILSKSQKQQGLKRSWFILKPQHQTIFDLSSDLLHIFDLQKSCPNGLILSMDGFVLPPFEPTCILKDKDIVSVKMKGGKSTEIIKAGNGMN-YLEELETMERLPVNTGVKHLANEEFDKETGGYKSELEEDEQELAPLEDRAQVESTPIENMVSKKRKA 584 MET RLRLV + N L+ + +GL++ W +LKPQH+TI DLSS +L +FDL +CP+GL LSM+GFVLPPFE TCIL DKDIV V K G +TEIIK +G+N L +E +++ PV TG LANEEF+KE+ Y+SE E D A +ED VE++P VSKKRKA Sbjct: 1 METVRLRLVLD--NALTTTT--EGLRKCWILLKPQHKTISDLSSHILQVFDLHNACPSGLFLSMEGFVLPPFESTCILNDKDIVRVIKKDGTATEIIKIDDGLNDSLNVVEIIDKPPVTTGTNLLANEEFEKESDSYESEQEVDVA--AEVED---VENSPEVKAVSKKRKA 163
BLAST of g.arboreum_cottongen_reftransV1_0013641 vs. ExPASy TrEMBL
Match: V7CZV8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G255700g PE=4 SV=1) HSP 1 Score: 291.582 bits (745), Expect = 6.072e-84 Identity = 165/353 (46.74%), Postives = 230/353 (65.16%), Query Frame = 3 Query: 969 KEKLQSKELLGKDDEKSPAKENLKFSEECLQAISNND-------VEDNVVPIVVRPGHIRFEPLEEENAEQANQYSQISVKTFQWNGITSKKKGQKWGMEKTFLKRNDNSFSHVSSEMVDVN--DKATVTNDMDFDKLMPYSSLPKEGDLVAYRLVELSSTWTPELCSFRVGEISHYNAESNRIMLTPVPGYPNAFEKKTDEEAS--ELPDTSLYGEDGSLEIDYSSLIDVRLVKLGILNA-TIAIADDNNEKYAQNQDVLTRQPNGSKEANSVSAAS---------PAQANGAVNVWEEINQALSAKKAELSKEDGWS-RADSSGRSAWSFRALRRSALGPTMAFLRAQNGI 1961 +EKL +L KD P K+N + Q S +D +D++VP+ +RPGHIRFEPL+++ +QA +Q SV+TFQWNGIT+KKKGQKWG E+ ++D + H S E V +K N +DFDK P++ LPKEGD++AYRL+ELS+++TPE+ SFRVG+IS Y+A+SNR+ L V YP F+K+++E+AS E D SLY EDGSLEIDY+SL+DVR+VK G ++ T+ ++ D + + +G + + S PA+ NG VNVWEEIN+ L AKKA+LS+++GWS R +SS +WS RA+R SALGPTMAFLR+ NG+ Sbjct: 344 QEKLPQTTVLEKDGPVLPIKDNKCVVSDVHQQSSEHDQSDEESEEDDDIVPVEIRPGHIRFEPLKKDQ-DQAVPQNQFSVETFQWNGITNKKKGQKWGKERMSFHKHDE-YEHSSQEYPTVQNAEKEPTINVVDFDKFRPHTGLPKEGDVIAYRLIELSASFTPEISSFRVGKISQYDAKSNRVWLELVLDYPFDFKKESEEDASSFEQSDASLYREDGSLEIDYASLVDVRMVKHGHPDSKTVVVSRD---AFVKPTKATNGSTDGKLTGDQTTVGSCQPEREGLIPAKENGEVNVWEEINKELEAKKAKLSQDNGWSTRGESSSTRSWSHRAMRCSALGPTMAFLRSNNGL 691 HSP 2 Score: 132.109 bits (331), Expect = 1.259e-28 Identity = 75/162 (46.30%), Postives = 100/162 (61.73%), Query Frame = 3 Query: 75 ETARLRLVFEDPNILSKSQKQQGLKRSWFILKPQHQTIFDLSSDLLHIFDLQKSCPNGLILSMDGFVLPPFEPTCILKDKDIVSVKMKGGKSTE-----IIKAGNGMNYLEELETMERLPVNTGVKHLANEEFDKETGGYKSELEEDEQELAPLEDRAQVES 545 E RLR+VFED +LSKS+K++GL R WF+LKPQH TI D++S L + F L ++CP G+ILSMDGFV+P FE TCILKDKDI+ VK KG T+ + A G ++ LP LA E ++E+G ++ +ED + LED VES Sbjct: 3 EMVRLRVVFEDRGMLSKSKKKEGLNRCWFLLKPQHSTISDVASHLHNAFRLHRTCPRGIILSMDGFVIPSFESTCILKDKDIICVKRKGNTWTDDKPAMLSPATRGYESID-------LP-----NVLAIEGLEEESGAEQTMSQEDNDD--KLEDVVCVES 150
BLAST of g.arboreum_cottongen_reftransV1_0013641 vs. ExPASy TrEMBL
Match: K7MPD3_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 286.189 bits (731), Expect = 1.639e-83 Identity = 160/313 (51.12%), Postives = 208/313 (66.45%), Query Frame = 3 Query: 1092 VVPIVVRPGHIRFEPLEEENAEQANQYSQISVKTFQWNGITSKKKGQKWGMEKT-FLKRNDNSFSHVSSEMVDVNDKATVTNDMDFDKLMPYSSLPKEGDLVAYRLVELSSTWTPELCSFRVGEISHYNAESNRIMLTPVPGYPNAFEKKTDEEASELP-DTSLYGEDGSLEIDYSSLIDVRLVKLGI--------LNATIAIADDNNEKYAQNQDVLTRQPNGSK------EANSVSAASP------AQANGAVNVWEEINQALSAKKAELSKEDGWSR-ADSSGRSAWSFRALRRSALGPTMAFLRAQNGI 1961 + P+ +RPGHIRFEPL+++ +QA +Q V+TFQWNGIT+KKKGQKWG E+ F K++ S V +K +N +DFDKL Y+SLPKEGD++AYRL+EL+++WTPEL SFRVG+IS Y+A+SNRI L PV YP F+KK DE+AS + D S Y EDGSLEI+Y+ L DVR+VK GI +N T A D NEK A + NGS + +V + P A+ NG VNVW++IN+AL AKKA+LS+ED WSR +SS +WS RA+R SALGPTMA LR+ NG+ Sbjct: 239 IAPVEIRPGHIRFEPLKKDQ-DQAVPQNQFPVETFQWNGITNKKKGQKWGKERMPFRKQDGYEDSGQDCPTVQNAEKEQTSNVIDFDKLKHYTSLPKEGDVIAYRLIELTASWTPELSSFRVGKISRYDAKSNRIWLEPVLEYPFDFKKKIDEDASSVQYDPSPYQEDGSLEIEYTLLADVRMVKHGIPDLKSDALVNPTKATNDITNEKLA------AKAINGSTGEKLAGDQTTVGSCHPERGHITAKENGEVNVWDKINEALKAKKAKLSQEDCWSRGGESSSTRSWSHRAMRCSALGPTMALLRSNNGL 544 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0013641 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0013641 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 0
InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0013641 ID=g.arboreum_cottongen_reftransV1_0013641; Name=g.arboreum_cottongen_reftransV1_0013641; organism=Gossypium arboreum; type=contig; length=2146bpback to top |