g.arboreum_cottongen_reftransV1_0005499, g.arboreum_cottongen_reftransV1_0005499 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0005499
Unique Nameg.arboreum_cottongen_reftransV1_0005499
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length1850
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chr5chromosomeg.arboreum_cottongen_reftransV1_0005499:1..1850 .
Chr5:52137385..52142598 +
Homology
BLAST of g.arboreum_cottongen_reftransV1_0005499 vs. ExPASy TrEMBL
Match: A0A0B2QAT0_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_011563 PE=4 SV=1)

HSP 1 Score: 640.958 bits (1652), Expect = 0.000e+0
Identity = 318/426 (74.65%), Postives = 365/426 (85.68%), Query Frame = 3
Query:  177 SSTSFNAKTNNEHAVKEVKEESSLSREASQDFDDVDADSHHAGSLSHKSGKNLXXXXXXXXXXXXFSGSCEMKLMNST-HLVEPVESRKFARFSLQYKQMEEKPEGEDQWVPRFAGHQNLQEREESFFARDQKINCGFVKGPQGYPSTGFDLAEDDVNYISRCHIAVISCIFGNSDRLRTPAGKMVTRSSRKNVCFVMFVDEATMQTLYSEGQTPDG-GFIGLWKIVVVKNLPYTDMRRVGKIPKLLPHRLFPFARYSIWLDSKXXXXXXXXXXXXYFLWRKGHEYAISNHYDRHCVWEEVAQNKKLNKYNHTVIDEQFDFYQADGLKRFDASDPNKLLPSNVPEGSFIVRAHTPMSNLFSCLWFNEVERFTPRDQLSFAYTYQKLRRTNPDKPFYLNMFKDCERRAVAKLFRHRSDEKRYIQQRA 1448
            S+ SF+ + +++   ++V+E SSL+++ S D      +S HA   + +S +      KKK +R KFSGSC+MKL+NST  LVEP+ESRKF+RF+LQY + EEKP+G++QWVPRFAGHQ+L+ERE SF ARDQ+INCGFVKGP+G+ STGFDL EDD NYISRCHIAVISCIFGNSDRLRTP  K VTR SRKNVCFVMF DE T++TL SEG  PD  GFIG WK+VVVKNLPY DMRRVGKIPKLLPHRLFPFARYSIWLDSKLRLQ DPL +L+YFLWRKG+E+AISNHYDRHCVWEEVAQNKKLNKYNHTVIDEQF FY+ADGL+RFDASDPNKLLPSNVPEGSFI+RAHTPMSNLFSCLWFNEV+RFTPRDQLSFA+TYQKLRR NPDKPF+LNMFKDCERR +AKLF HR DEKR  +Q+ 
Sbjct:  275 SNDSFDEENDDDVTSEDVEEASSLNKKNSHD---GKTNSKHANHSNGQSIRKSHPETKKKAKRHKFSGSCDMKLLNSTSQLVEPLESRKFSRFNLQYTETEEKPQGDEQWVPRFAGHQSLEERESSFLARDQQINCGFVKGPEGFQSTGFDLTEDDANYISRCHIAVISCIFGNSDRLRTPTTKTVTRLSRKNVCFVMFTDEVTIRTLSSEGHVPDRMGFIGFWKLVVVKNLPYDDMRRVGKIPKLLPHRLFPFARYSIWLDSKLRLQLDPLLILEYFLWRKGYEFAISNHYDRHCVWEEVAQNKKLNKYNHTVIDEQFAFYRADGLERFDASDPNKLLPSNVPEGSFIIRAHTPMSNLFSCLWFNEVDRFTPRDQLSFAHTYQKLRRMNPDKPFHLNMFKDCERRHIAKLFHHRLDEKRINRQKT 697          
BLAST of g.arboreum_cottongen_reftransV1_0005499 vs. ExPASy TrEMBL
Match: K7LKR1_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 640.573 bits (1651), Expect = 0.000e+0
Identity = 318/426 (74.65%), Postives = 365/426 (85.68%), Query Frame = 3
Query:  177 SSTSFNAKTNNEHAVKEVKEESSLSREASQDFDDVDADSHHAGSLSHKSGKNLXXXXXXXXXXXXFSGSCEMKLMNST-HLVEPVESRKFARFSLQYKQMEEKPEGEDQWVPRFAGHQNLQEREESFFARDQKINCGFVKGPQGYPSTGFDLAEDDVNYISRCHIAVISCIFGNSDRLRTPAGKMVTRSSRKNVCFVMFVDEATMQTLYSEGQTPD-GGFIGLWKIVVVKNLPYTDMRRVGKIPKLLPHRLFPFARYSIWLDSKXXXXXXXXXXXXYFLWRKGHEYAISNHYDRHCVWEEVAQNKKLNKYNHTVIDEQFDFYQADGLKRFDASDPNKLLPSNVPEGSFIVRAHTPMSNLFSCLWFNEVERFTPRDQLSFAYTYQKLRRTNPDKPFYLNMFKDCERRAVAKLFRHRSDEKRYIQQRA 1448
            S+ SF+ + +++   ++V+E SSL+++ S D      +S HA   + +S +      KKK +R KFSGSC+MKL+NST  LVEP+ESRKF+RF+LQY + EEKP+G++QWVPRFAGHQ+L+ERE SF ARDQ+INCGFVKGP+G+ STGFDL EDD NYISRCHIAVISCIFGNSDRLRTP  K VTR SRKNVCFVMF DE T++TL SEG  PD  GFIG WK+VVVKNLPY DMRRVGKIPKLLPHRLFPFARYSIWLDSKLRLQ DPL +L+YFLWRKG+E+AISNHYDRHCVWEEVAQNKKLNKYNHTVIDEQF FY+ADGL+RFDASDPNKLLPSNVPEGSFI+RAHTPMSNLFSCLWFNEV+RFTPRDQLSFA+TYQKLRR NPDKPF+LNMFKDCERR +AKLF HR DEKR  +Q+ 
Sbjct:  287 SNDSFDEENDDDVTSEDVEEASSLNKKNSHD---GKTNSKHANHSNGQSIRKSHPETKKKAKRHKFSGSCDMKLLNSTSQLVEPLESRKFSRFNLQYTETEEKPQGDEQWVPRFAGHQSLEERESSFLARDQQINCGFVKGPEGFQSTGFDLTEDDANYISRCHIAVISCIFGNSDRLRTPTTKTVTRLSRKNVCFVMFTDEVTIRTLSSEGHVPDRMGFIGFWKLVVVKNLPYDDMRRVGKIPKLLPHRLFPFARYSIWLDSKLRLQLDPLLILEYFLWRKGYEFAISNHYDRHCVWEEVAQNKKLNKYNHTVIDEQFAFYRADGLERFDASDPNKLLPSNVPEGSFIIRAHTPMSNLFSCLWFNEVDRFTPRDQLSFAHTYQKLRRMNPDKPFHLNMFKDCERRHIAKLFHHRLDEKRINRQKT 709          
BLAST of g.arboreum_cottongen_reftransV1_0005499 vs. ExPASy TrEMBL
Match: B9MW74_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s11800g PE=4 SV=1)

HSP 1 Score: 639.417 bits (1648), Expect = 0.000e+0
Identity = 332/444 (74.77%), Postives = 369/444 (83.11%), Query Frame = 3
Query:  144 EAKSHDKNVNESSTSFNAKTNNEHAVKEVKEES-SLSREAS---QDFDDVDADSHHAGSLSHKSGKNLXXXXXXXXXXXXFSGS-CEMKLMNST-HLVEPVESRKFARFSLQYKQMEEKPEGEDQWVPRFAGHQNLQEREESFFARDQKINCGFVKGPQGYPSTGFDLAEDDVNYISRCHIAVISCIFGNSDRLRTPAGKMVTRSSRKNVCFVMFVDEATMQTLYSEGQTPD-GGFIGLWKIVVVKNLPYTDMRRVGKIPKLLPHRLFPFARYSIWLDSKXXXXXXXXXXXXYFLWRKGHEYAISNHYDRHCVWEEVAQNKKLNKYNHTVIDEQFDFYQADGLKRFDASDPNKLLPSNVPEGSFIVRAHTPMSNLFSCLWFNEVERFTPRDQLSFAYTYQKLRRTNPDKPFYLNMFKDCERRAVAKLFRHRSDEKR-YIQQRAT 1451
            E   H ++   SS   +A+T +++  K+  E+S SL  + S   Q+ DD D DS +  ++   S    RS  KKK +RRKFSGS C MKL+NST  LVEP ESRKFARFSLQY ++EEKP+G++QW PRFAGHQ+L EREESF A DQKINCGFVKG +G  STGFDLAEDD +YISRCHIAVISCIFGNSDRLR+PA KMVTR SRKNVCFVMF+DE + QTL SEG  PD  GF+GLWKIVVVKNLPY DMRRVGK+PKLLPHRLFP ARYSIWLDSKLRLQ DPL +L+YFLWRKGHEYAISNHYDRHCVWEEV QNKKLNKYNHTVID+QF FYQADGLKRF+ SDPNKLLPSNVPEGS IVRAHTPMSNLFSCLWFNEV+RFTPRDQLSFA+TYQKLRR NP KPFYLNMFKDCERRA+AKLFRHRSDEKR  + Q AT
Sbjct:  234 ETTVHIEDNRASSNFLDAETKDQNIAKDNLEDSMSLLEKGSLNSQNLDDGDTDSRNVHNIGGHSTSKSRSDSKKKSKRRKFSGSSCGMKLLNSTTRLVEPFESRKFARFSLQYTEIEEKPDGQEQWEPRFAGHQSLHEREESFLAHDQKINCGFVKGSEGSSSTGFDLAEDDASYISRCHIAVISCIFGNSDRLRSPADKMVTRLSRKNVCFVMFMDEVSFQTLTSEGHIPDRAGFVGLWKIVVVKNLPYNDMRRVGKVPKLLPHRLFPSARYSIWLDSKLRLQVDPLLVLEYFLWRKGHEYAISNHYDRHCVWEEVVQNKKLNKYNHTVIDQQFAFYQADGLKRFNVSDPNKLLPSNVPEGSLIVRAHTPMSNLFSCLWFNEVDRFTPRDQLSFAFTYQKLRRMNPGKPFYLNMFKDCERRAIAKLFRHRSDEKRSTLHQEAT 677          
BLAST of g.arboreum_cottongen_reftransV1_0005499 vs. ExPASy TrEMBL
Match: A0A068V9T5_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_149 OS=Coffea canephora GN=GSCOC_T00013655001 PE=4 SV=1)

HSP 1 Score: 639.032 bits (1647), Expect = 0.000e+0
Identity = 334/462 (72.29%), Postives = 371/462 (80.30%), Query Frame = 3
Query:   90 SRKEDYDDFGHDKDYILDEAKSHDKNVNESSTSFNAKTNNEHAVKEVKEESS-----LSREASQDFDDVDADSHHAGSL----SHKSGKNLXXXXXXXXXXXXFSGSCEMKLMNSTHL-VEPVESRKFARFSLQYKQMEEKPEGEDQWVPRFAGHQNLQEREESFFARDQKINCGFVKGPQGYPSTGFDLAEDDVNYISRCHIAVISCIFGNSDRLRTPAGKMVTRSSRKNVCFVMFVDEATMQTLYSEGQTPD-GGFIGLWKIVVVKNLPYTDMRRVGKIPKLLPHRLFPFARYSIWLDSKXXXXXXXXXXXXYFLWRKGHEYAISNHYDRHCVWEEVAQNKKLNKYNHTVIDEQFDFYQADGLKRFDASDPNKLLPSNVPEGSFIVRAHTPMSNLFSCLWFNEVERFTPRDQLSFAYTYQKLRRTNPDKPFYLNMFKDCERRAVAKLFRHRSDEKRYIQQ 1442
             RKED  +   D         S+D +  ES+    A+T +++ V EV E S+      S  +S+    V   S HA  +    S +S    RS  KKK +RRKFSGSCEMKL+NST L VEP+ESRKFARFSLQY + EEKP  +++W PRFAGHQ+L+EREESF A DQKINCGFVKG  GYPSTGFDLAEDD  YIS CHIAV+SCIFGNSDRLR P GKMV+R SRKNVCFVMFVDEAT+Q L SEG   D  GFIGLWK+VVVKNLPYTDMRRVGK+PKLL HRLFP ARYSIWLDSKLRLQ DPL +L+YFLWRKGHEYAISNHYDRHCVWEEVAQNKKLNKYNHTVIDEQF FYQ DGLKRF+ASDPNKLLPSNVPEGSFIVRAHTPMSNLFSCLWFNEV+RFTPRDQLSFAYTY KLRRTNP+KPFYLNMFKDCERR +AKLFRHRS+E++ +Q 
Sbjct:  249 GRKEDDGEMEQDDGDHSGATTSYDLDGGESANLHKAQTKHQNIVHEVDEASTDLSDKESASSSEHSGKVPGHSGHARPIDSQYSRRSATEKRSGSKKKSKRRKFSGSCEMKLLNSTALLVEPLESRKFARFSLQYTEAEEKPNDDEEWQPRFAGHQSLREREESFIAHDQKINCGFVKGSSGYPSTGFDLAEDDAKYISSCHIAVVSCIFGNSDRLRIPVGKMVSRLSRKNVCFVMFVDEATLQALSSEGHMLDRMGFIGLWKVVVVKNLPYTDMRRVGKVPKLLSHRLFPSARYSIWLDSKLRLQLDPLLILEYFLWRKGHEYAISNHYDRHCVWEEVAQNKKLNKYNHTVIDEQFQFYQNDGLKRFNASDPNKLLPSNVPEGSFIVRAHTPMSNLFSCLWFNEVDRFTPRDQLSFAYTYHKLRRTNPEKPFYLNMFKDCERRKMAKLFRHRSEERKTVQH 710          
BLAST of g.arboreum_cottongen_reftransV1_0005499 vs. ExPASy TrEMBL
Match: F6GY08_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0072g01020 PE=4 SV=1)

HSP 1 Score: 635.95 bits (1639), Expect = 0.000e+0
Identity = 337/460 (73.26%), Postives = 375/460 (81.52%), Query Frame = 3
Query:   90 SRKEDYDDFGHDKDYILDEAKSHDKNVNESSTSFNAKTNNEHAVKEVKEESSLSREASQDFDDVDADSHHAGSLSHKSGKNLXXXX---XXXXXXXXFSGS-CEMKLMNST-HLVEPVESRKFARFSLQYKQMEEKPEGEDQWVPRFAGHQNLQEREESFFARDQKINCGFVKGPQGYPSTGFDLAEDDVNYISRCHIAVISCIFGNSDRLRTPAGKMVTRSSRKNVCFVMFVDEATMQTLYSEGQTPD-GGFIGLWKIVVVKNLPYTDMRRVGKIPKLLPHRLFPFARYSIWLDSKXXXXXXXXXXXXYFLWRKGHEYAISNHYDRHCVWEEVAQNKKLNKYNHTVIDEQFDFYQADGLKRFDASDPNKLLPSNVPEGSFIVRAHTPMSNLFSCLWFNEVERFTPRDQLSFAYTYQKLRRTNPDKPFYLNMFKDCERRAVAKLFRHRSDEKRYIQQRAT 1451
            +R  + DD GH+   I + AKSHD     SS S +A T + + V+EV E SS+S   +        +S H   +  +S +   S      K+ RR KFSGS CEMKL+NST  LVEP+ESRKFARFSLQY  +EEKP G++ W PRF+GHQ+LQEREESF A DQKINC FVK P+GYPSTGFDLAEDDV YIS CHIAVISCIFGNSDRLR+PAGK ++R SRKNVCFVMF+DE T+QTL SE Q PD  GFIGLWK VVVKNLPYTDMRRVGKIPKLL HRLFP ARYSIWLDSKLRLQ DPL +L+YFLWRKGHEYAISNHYDRHCVWEEVAQNKKLNKYNH++ID+QF FYQADGLKRF+ASDPNKLLPSNVPEGSFIVRAHTPMSNLFSCLWFNEV+RFTPRDQLSFAYTYQKLRR NP KPF+LNMFKDCERRA+AKLFRHRS+EKR I Q A 
Sbjct:  249 ARMVEDDDNGHENGDISNVAKSHD-----SSDSISAGTKDGNIVEEVDESSSVSSSLNSQ------NSRHVSVVDGRSTRKFSSEKRPESKRKRRHKFSGSSCEMKLLNSTAQLVEPLESRKFARFSLQYTAVEEKPNGQEHWEPRFSGHQSLQEREESFLAHDQKINCAFVKSPKGYPSTGFDLAEDDVRYISSCHIAVISCIFGNSDRLRSPAGKTISRLSRKNVCFVMFMDEITLQTLSSERQMPDRMGFIGLWKTVVVKNLPYTDMRRVGKIPKLLAHRLFPSARYSIWLDSKLRLQLDPLLILEYFLWRKGHEYAISNHYDRHCVWEEVAQNKKLNKYNHSIIDQQFAFYQADGLKRFNASDPNKLLPSNVPEGSFIVRAHTPMSNLFSCLWFNEVDRFTPRDQLSFAYTYQKLRRVNPGKPFHLNMFKDCERRAIAKLFRHRSEEKRNILQAAA 697          
BLAST of g.arboreum_cottongen_reftransV1_0005499 vs. ExPASy TrEMBL
Match: V7BCT5_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G090000g PE=4 SV=1)

HSP 1 Score: 634.024 bits (1634), Expect = 0.000e+0
Identity = 317/421 (75.30%), Postives = 359/421 (85.27%), Query Frame = 3
Query:  174 ESSTSFNAKTNNEHAVKEVKEESSLSREASQDFDDVDADSHHAGSLSHKSGKNLXXXXXXXXXXXXFSGSCEMKLMNST-HLVEPVESRKFARFSLQYKQMEEKPEGEDQWVPRFAGHQNLQEREESFFARDQKINCGFVKGPQGYPSTGFDLAEDDVNYISRCHIAVISCIFGNSDRLRTPAGKMVTRSSRKNVCFVMFVDEATMQTLYSEGQTPD-GGFIGLWKIVVVKNLPYTDMRRVGKIPKLLPHRLFPFARYSIWLDSKXXXXXXXXXXXXYFLWRKGHEYAISNHYDRHCVWEEVAQNKKLNKYNHTVIDEQFDFYQADGLKRFDASDPNKLLPSNVPEGSFIVRAHTPMSNLFSCLWFNEVERFTPRDQLSFAYTYQKLRRTNPDKPFYLNMFKDCERRAVAKLFRHRSDEKR 1430
            ES+ S   + N++   ++++  SSL+++      +   +S HA + + +S +      KKK RRRKFSGSCEMKL+NST  LVEP+ESRKFARF+L Y +MEEKP GE+QWVPRFAGHQ+L+ERE SF ARDQKINCGFVKGP+G  STGFDL EDD +YISRCHIAVISCIFGNSDRLR PA K VTR SRKNVCFVMF DE T++TL SEG  PD  GFIG WK+VVVKNLPY DMRRVGKIPKLLPHRLFPFARYSIWLDSKLRLQ DPL +L+YFLWRKG+E+AISNHYDRHCVWEEVAQNKKLNKYNHTVID+QF FY+ADG++RFDASDPNKLLPSNVPEGSFI+RAHTPMSNLFSCLWFNEV+RFTPRDQLSFAYTYQKLRR N DKPF+LNMFKDCERR +AKLFRHR DEK+
Sbjct:  278 ESNDSLAEENNDDVTSEDIEGASSLNKKI---LLEGKTNSKHASNFNGQSTRKSHPETKKKVRRRKFSGSCEMKLLNSTSQLVEPLESRKFARFNLHYTEMEEKPLGEEQWVPRFAGHQSLEERESSFLARDQKINCGFVKGPEGSQSTGFDLTEDDTSYISRCHIAVISCIFGNSDRLRIPATKTVTRLSRKNVCFVMFTDEITIRTLSSEGHVPDRMGFIGFWKLVVVKNLPYDDMRRVGKIPKLLPHRLFPFARYSIWLDSKLRLQLDPLLILEYFLWRKGYEFAISNHYDRHCVWEEVAQNKKLNKYNHTVIDQQFSFYRADGMERFDASDPNKLLPSNVPEGSFIIRAHTPMSNLFSCLWFNEVDRFTPRDQLSFAYTYQKLRRMNADKPFHLNMFKDCERRHIAKLFRHRLDEKK 695          
BLAST of g.arboreum_cottongen_reftransV1_0005499 vs. ExPASy TrEMBL
Match: A5BHD2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_029506 PE=4 SV=1)

HSP 1 Score: 632.869 bits (1631), Expect = 0.000e+0
Identity = 303/359 (84.40%), Postives = 326/359 (90.81%), Query Frame = 3
Query:  381 SCEMKLMNST-HLVEPVESRKFARFSLQYKQMEEKPEGEDQWVPRFAGHQNLQEREESFFARDQKINCGFVKGPQGYPSTGFDLAEDDVNYISRCHIAVISCIFGNSDRLRTPAGKMVTRSSRKNVCFVMFVDEATMQTLYSEGQTPD-GGFIGLWKIVVVKNLPYTDMRRVGKIPKLLPHRLFPFARYSIWLDSKXXXXXXXXXXXXYFLWRKGHEYAISNHYDRHCVWEEVAQNKKLNKYNHTVIDEQFDFYQADGLKRFDASDPNKLLPSNVPEGSFIVRAHTPMSNLFSCLWFNEVERFTPRDQLSFAYTYQKLRRTNPDKPFYLNMFKDCERRAVAKLFRHRSDEKRYIQQRAT 1451
            SCEMKL+NST  LVEP+ESRKFARFSLQY  +EEKP G++ W PRF+GHQ+LQEREESF A DQKINC FVK P+GYPSTGFDLAEDDV YIS CHIAVISCIFGNSDRLR+PAGK ++R SRKNVCFVMF+DE T+QTL SE Q PD  GFIGLWK VVVKNLPYTDMRRVGKIPKLL HRLFP ARYSIWLDSKLRLQ DPL +L+YFLWRKGHEYAISNHYDRHCVWEEVAQNKKLNKYNH++ID+QF FYQADGLKRF+ASDPNKLLPSNVPEGSFIVRAHTPMSNLFSCLWFNEV+RFTPRDQLSFAYTYQKLRR NP KPF+LNMFKDCERRA+AKLFRHRS+EKR I Q A 
Sbjct:  333 SCEMKLLNSTAQLVEPLESRKFARFSLQYTAVEEKPNGQEHWEPRFSGHQSLQEREESFLAHDQKINCAFVKSPKGYPSTGFDLAEDDVRYISSCHIAVISCIFGNSDRLRSPAGKTISRLSRKNVCFVMFMDEITLQTLSSERQMPDRMGFIGLWKTVVVKNLPYTDMRRVGKIPKLLAHRLFPSARYSIWLDSKLRLQLDPLLILEYFLWRKGHEYAISNHYDRHCVWEEVAQNKKLNKYNHSIIDQQFAFYQADGLKRFNASDPNKLLPSNVPEGSFIVRAHTPMSNLFSCLWFNEVDRFTPRDQLSFAYTYQKLRRVNPGKPFHLNMFKDCERRAIAKLFRHRSEEKRNILQAAA 691          
BLAST of g.arboreum_cottongen_reftransV1_0005499 vs. ExPASy TrEMBL
Match: B9SLF7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0686140 PE=4 SV=1)

HSP 1 Score: 629.017 bits (1621), Expect = 0.000e+0
Identity = 329/449 (73.27%), Postives = 365/449 (81.29%), Query Frame = 3
Query:   99 EDYDDFGHDKDYILDEAKSHDKNVNESSTSFNAKTNNEHAVK---EVKEESSLSREASQDFDDVDADSHHAGSLSHKSGKNLXXXXXXXXXXXXFSGSCEMKLMNST-HLVEPVESRKFARFSLQYKQMEEKPEGEDQWVPRFAGHQNLQEREESFFARDQKINCGFVKGPQGYPSTGFDLAEDDVNYISRCHIAVISCIFGNSDRLRTPAGKMVTRSSRKNVCFVMFVDEATMQTLYSEGQTPD-GGFIGLWKIVVVKNLPYTDMRRVGKIPKLLPHRLFPFARYSIWLDSKXXXXXXXXXXXXYFLWRKGHEYAISNHYDRHCVWEEVAQNKKLNKYNHTVIDEQFDFYQADGLKRFDASDPNKLLPSNVPEGSFIVRAHTPMSNLFSCLWFNEVERFTPRDQLSFAYTYQKLRRTNPDKPFYLNMFKDCERRAVAKLFRHRSDEKR 1430
            EDY D  HD  +      S D++  E S   +A T +++  K   EV E  S      +  D+VD +S    S S +S    RS  KKK R RK  GSCEMK +NST  LVEP ESRKFARFSLQY + EEKP G+ QW P+FAGHQ+LQE EESF   DQKINCGFVKGP+G PSTGFDL+EDD +YISRCHIAVISCIFGNSDRLR+P  KMVTR SRKNVCFV+FVD+ T+QTL SEG  PD  GFIG WK+VVVKNLPYTDMRRVGKIPK+LPHRLFP ARYSIWLDSKLRLQ DPL +L+YFLWRKG+EYAISNHYDRHCVWEEVAQNK+LNKYNHT+ID+QF FYQADGLK+F+ASDPNKLLPSNVPEGS IVRAHTPMSNLFSCLWFNEVERFTPRDQLSFAYTYQKLRR NPDKPF+L+MFKDCERRAVAKLFRHRS+EKR
Sbjct:  267 EDYGDSDHDNGHQASVRISSDEDGREFSNFNDADTKDQNVAKDNHEVSENISDKSLNIRTLDNVDNNSQVGRSSSGQSTTKSRSYSKKKSRHRK--GSCEMKFLNSTTQLVEPFESRKFARFSLQYSEKEEKPNGDLQWEPKFAGHQSLQEWEESFLVHDQKINCGFVKGPEGSPSTGFDLSEDDASYISRCHIAVISCIFGNSDRLRSPPTKMVTRLSRKNVCFVIFVDKITLQTLSSEGHMPDIAGFIGFWKVVVVKNLPYTDMRRVGKIPKMLPHRLFPSARYSIWLDSKLRLQIDPLLVLEYFLWRKGYEYAISNHYDRHCVWEEVAQNKRLNKYNHTIIDQQFTFYQADGLKKFNASDPNKLLPSNVPEGSLIVRAHTPMSNLFSCLWFNEVERFTPRDQLSFAYTYQKLRRMNPDKPFHLHMFKDCERRAVAKLFRHRSEEKR 713          
BLAST of g.arboreum_cottongen_reftransV1_0005499 vs. ExPASy TrEMBL
Match: A0A022Q4D1_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a002395mg PE=4 SV=1)

HSP 1 Score: 626.32 bits (1614), Expect = 0.000e+0
Identity = 329/453 (72.63%), Postives = 376/453 (83.00%), Query Frame = 3
Query:   99 EDYDDFGHD-KDYILDEAKSHDKNVNESSTSFNAKTNNEHAVKEVKEESSLSREASQDFDDVDADSHHAGSL-SHKSGKNL---XXXXXXXXXXXXFSGSCEMKLMNS-THLVEPVESRKFARFSLQYKQMEEKPEGEDQWVPRFAGHQNLQEREESFFARDQKINCGFVKGPQGYPSTGFDLAEDDVNYISRCHIAVISCIFGNSDRLRTPAGKMVTRSSRKNVCFVMFVDEATMQTLYSEGQTPDG-GFIGLWKIVVVKNLPYTDMRRVGKIPKLLPHRLFPFARYSIWLDSKXXXXXXXXXXXXYFLWRKGHEYAISNHYDRHCVWEEVAQNKKLNKYNHTVIDEQFDFYQADGLKRFDASDPNKLLPSNVPEGSFIVRAHTPMSNLFSCLWFNEVERFTPRDQLSFAYTYQKLRRTNPDKPFYLNMFKDCERRAVAKLFRHRSDEKRYI 1436
            ED DD GHD KD+    + +  + V     S N +++ + +   + + SSL  + +Q    VDA S HA S+ +H   K +   RS  +KKP+RRKFSGSCEMK+ NS T LVEPVESRKFARFSLQY + EEKP G+++W PRFAGHQ+L EREESF ARDQKINCGFVKGP+G  STGFDLAEDD  YIS CHIAV+SCIFGNSDRLR+P GK V+R+SRKNVCFVMFVDE T+QTL +EGQ PD  GF+GLWKIVVVKN P+TDMRRVGKIPK LPHRLFP ARYSIWLDSKLRLQ DPL +L+YFLWRKG+EYAISNHYDRHC+WEEVAQNKKLNKYNH+VIDEQF FYQADG+KRF+ASD NKLLPSNVPEGSFIVRAHTPMSNLFSCLWFNEV+RFTPRDQLSFAYTY KLRRTNP+KPF+LNMFKDCERR +AKL+ HRS+E+R I
Sbjct:  230 EDGDDVGHDDKDH---SSATEPRTVRNKKQSINEESDKD-STGLLSKGSSLESQHAQ----VDAVSGHANSVEAHHVRKVMPGKRSGSRKKPKRRKFSGSCEMKISNSSTLLVEPVESRKFARFSLQYTKKEEKPFGDEKWEPRFAGHQSLGEREESFIARDQKINCGFVKGPKGSQSTGFDLAEDDAKYISSCHIAVMSCIFGNSDRLRSPIGKTVSRTSRKNVCFVMFVDEVTLQTLSAEGQMPDTMGFVGLWKIVVVKNPPFTDMRRVGKIPKFLPHRLFPSARYSIWLDSKLRLQLDPLLILEYFLWRKGYEYAISNHYDRHCLWEEVAQNKKLNKYNHSVIDEQFAFYQADGMKRFNASDANKLLPSNVPEGSFIVRAHTPMSNLFSCLWFNEVDRFTPRDQLSFAYTYHKLRRTNPEKPFFLNMFKDCERRKIAKLYHHRSEERRNI 674          
BLAST of g.arboreum_cottongen_reftransV1_0005499 vs. ExPASy TrEMBL
Match: A0A0A0LMG5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G402080 PE=4 SV=1)

HSP 1 Score: 617.461 bits (1591), Expect = 0.000e+0
Identity = 305/431 (70.77%), Postives = 356/431 (82.60%), Query Frame = 3
Query:  165 NVNESSTSFNAKTNNEHAVKEVKEESSLSREASQDFDDVDADSHHAGSLSHKSGKNLXXXXXXXXXXXXFSGS-CEMKLMNST-HLVEPVESRKFARFSLQYKQMEEKPEGEDQWVPRFAGHQNLQEREESFFARDQKINCGFVKGPQGYPSTGFDLAEDDVNYISRCHIAVISCIFGNSDRLRTPAGKMVTRSSRKNVCFVMFVDEATMQTLYSEGQTPD-GGFIGLWKIVVVKNLPYTDMRRVGKIPKLLPHRLFPFARYSIWLDSKXXXXXXXXXXXXYFLWRKGHEYAISNHYDRHCVWEEVAQNKKLNKYNHTVIDEQFDFYQADGLKRFDASDPNKLLPSNVPEGSFIVRAHTPMSNLFSCLWFNEVERFTPRDQLSFAYTYQKLRRTNPDKPFYLNMFKDCERRAVAKLFRHRSDEKRYIQQRA 1448
            NV++  T +  +  N        +E   S  +SQ  D  + +S H    + +  K  +  P+KKP+ RKFSGS CEMK +NST  ++EP+E++KF RF+LQY   E+ P  +++W+PRFAGHQ LQERE SF+A+DQKINCGFVKGP+ + STGFDL EDD NY+SRCHIAV+SCIFGNSD LR+P GK VTR SRKNVCFVMF+DE T++TL SEGQT D  GFIGLWKIVVVKNLPYTDMRRVGKIPKLLPHR+FP ARYSIWLDSKLRLQ DPL +L+YFLWRKG+E+AISNHYDRHCVWEEVAQNK+LNKYNHT+ID+QF FYQADGLKRF+ASD NKLLPSNVPEGSFI+RAHTPMSNLFSCLWFNEV++FTPRDQLSFAYTYQKL+R NP KPFYLNMFKDCERR +AKLFRHRSDEKR + + A
Sbjct:  301 NVDDGETKYQQEDENVETSNHSLDEDYTS--SSQHVDKANQNSKHVSVTNSQHTKRSKLDPRKKPKHRKFSGSSCEMKFLNSTAQILEPIENKKFVRFTLQYTDTEQDPSNQEKWMPRFAGHQTLQERETSFYAQDQKINCGFVKGPKTFSSTGFDLTEDDSNYVSRCHIAVVSCIFGNSDHLRSPTGKTVTRFSRKNVCFVMFMDEVTLETLSSEGQTVDRMGFIGLWKIVVVKNLPYTDMRRVGKIPKLLPHRIFPSARYSIWLDSKLRLQYDPLLILEYFLWRKGYEFAISNHYDRHCVWEEVAQNKRLNKYNHTIIDQQFSFYQADGLKRFNASDVNKLLPSNVPEGSFIIRAHTPMSNLFSCLWFNEVDKFTPRDQLSFAYTYQKLKRMNPGKPFYLNMFKDCERRKIAKLFRHRSDEKRIVHKNA 729          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0005499 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0B2QAT0_GLYSO0.000e+074.65Uncharacterized protein OS=Glycine soja GN=glysoja... [more]
K7LKR1_SOYBN0.000e+074.65Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
B9MW74_POPTR0.000e+074.77Uncharacterized protein OS=Populus trichocarpa GN=... [more]
A0A068V9T5_COFCA0.000e+072.29Coffea canephora DH200=94 genomic scaffold, scaffo... [more]
F6GY08_VITVI0.000e+073.26Putative uncharacterized protein OS=Vitis vinifera... [more]
V7BCT5_PHAVU0.000e+075.30Uncharacterized protein OS=Phaseolus vulgaris GN=P... [more]
A5BHD2_VITVI0.000e+084.40Putative uncharacterized protein OS=Vitis vinifera... [more]
B9SLF7_RICCO0.000e+073.27Putative uncharacterized protein OS=Ricinus commun... [more]
A0A022Q4D1_ERYGU0.000e+072.63Uncharacterized protein OS=Erythranthe guttata GN=... [more]
A0A0A0LMG5_CUCSA0.000e+070.77Uncharacterized protein OS=Cucumis sativus GN=Csa_... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0005499 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006852Protein of unknown function DUF616PFAMPF04765DUF616coord: 23..341
e-value: 1.2E-144
score: 481.2
NoneNo IPR availablePANTHERPTHR12956:SF24SUBFAMILY NOT NAMEDcoord: 1..354
NoneNo IPR availablePANTHERPTHR12956ALKALINE CERAMIDASE-RELATEDcoord: 1..354

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0005499 ID=g.arboreum_cottongen_reftransV1_0005499; Name=g.arboreum_cottongen_reftransV1_0005499; organism=Gossypium arboreum; type=contig; length=1850bp
ATCAGCTCTCTGACAGTAAGGATTTTGGAATTCATGATGAGATTGATGAT
GATGATGACCATTATAATGATGGCATTGATTCTAATGATAGTCGCAAGGA
AGATTATGATGATTTTGGACATGACAAGGACTATATTTTAGATGAAGCAA
AATCTCATGATAAAAATGTTAATGAGTCCTCTACTTCCTTTAATGCTAAA
ACTAACAATGAGCATGCTGTCAAAGAGGTAAAGGAAGAATCCTCTTTATC
TAGGGAGGCCTCTCAAGATTTTGATGATGTAGATGCTGATTCTCATCATG
CTGGTTCTCTTAGTCATAAATCTGGAAAAAACTTACGGTCAAGTCCAAAG
AAAAAGCCAAGGCGCCGAAAATTTTCAGGTTCTTGTGAGATGAAATTAAT
GAATTCAACACACCTTGTGGAGCCTGTAGAAAGTCGGAAGTTTGCTCGAT
TTTCCTTACAGTATAAACAAATGGAAGAGAAGCCTGAAGGAGAAGACCAA
TGGGTACCTAGATTTGCCGGGCATCAGAATTTACAAGAACGTGAGGAATC
TTTTTTCGCACGTGACCAAAAGATAAATTGTGGGTTTGTTAAAGGTCCAC
AAGGATATCCAAGCACTGGCTTTGATCTGGCAGAAGATGATGTGAATTAT
ATCAGCAGGTGCCACATTGCTGTCATATCTTGCATTTTCGGAAATTCTGA
TCGCTTGAGGACACCTGCTGGCAAAATGGTTACTCGTTCGTCAAGGAAAA
ATGTCTGCTTTGTTATGTTTGTGGATGAAGCTACGATGCAAACACTTTAT
TCAGAAGGTCAAACACCTGATGGTGGTTTTATTGGTTTATGGAAGATAGT
GGTTGTAAAGAATCTTCCTTACACTGATATGCGTAGGGTGGGAAAAATAC
CAAAACTGTTACCGCATCGACTATTTCCTTTTGCAAGGTACTCAATCTGG
TTAGATAGCAAACTACGTCTACAGCGTGACCCCTTACAACTCCTGGATTA
CTTCTTGTGGCGAAAAGGTCATGAGTATGCCATTTCTAATCACTATGATC
GTCATTGTGTCTGGGAAGAGGTTGCGCAAAATAAGAAGCTGAACAAGTAT
AATCATACAGTCATTGATGAGCAATTTGATTTCTATCAGGCTGATGGACT
GAAAAGATTCGATGCTTCAGATCCTAACAAGCTTCTTCCTAGCAATGTGC
CTGAAGGTTCATTTATTGTTAGAGCACACACCCCGATGTCAAATTTGTTT
TCATGTCTTTGGTTCAATGAGGTTGAGCGGTTTACTCCCCGTGATCAGCT
AAGTTTTGCATATACATACCAGAAATTGCGAAGAACAAATCCTGACAAAC
CCTTTTATCTGAACATGTTCAAGGATTGTGAGAGGAGAGCCGTAGCTAAG
TTGTTTCGACATAGATCGGATGAGAAGCGATATATTCAGCAACGGGCAAC
ATTGTAAAATGTATGTTGTATTATCAAACCTTTTCTGTTGAATATAAAAA
GAATTATTTTTTGTACACTTTCCTTGGCCATGCTGGTTCATAAAGAAAGG
ATCAGAGTTGCATCGGTGGTGATGGTTGTTGACATAGAATGATGGACGTC
GAGGGAACAAAGTTTGTCGAGCATGGTGGAGGTATCTTGGTTGGGGGGGA
AAGTCCATTGGCTTTAATTTGCTAGAAAAATTCTGTTTTGCATAATTGTT
ATTTGTTCTTTTGTTCACATTGATTGCTTCGTCCATAGGTAAAAACGGAG
GACCAATACTAATGTACTTCTTACAACTAAAATTTGTTGTATTATTGCTA
TTACTATTATCATCATTTTTTGAACCTTTCAATTGGCTATTGAAGTTTTA
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR006852TOD1_MUCI70