g.arboreum_cottongen_reftransV1_0015644, g.arboreum_cottongen_reftransV1_0015644 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0015644 vs. ExPASy TrEMBL
Match: V7CP45_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G278300g PE=4 SV=1) HSP 1 Score: 564.688 bits (1454), Expect = 0.000e+0 Identity = 264/344 (76.74%), Postives = 302/344 (87.79%), Query Frame = 2 Query: 887 QSEETKEAQ---VPPPPPEKVSIWGIPLLADEKSDVILLKFLRARDFKVKDAFTMIKNTVSWRKEFGIETLLDEDLGNELEKVVFMQGFDKEGHPVCYNVYGEFQNKELYQNTFADEEKRSKFLRWRIQFLEKSIRKLDFNPTGINTMVQVNDLKNSPGPGKKELRQATNQALNLLQDNYPEFVAKQVFINVPWWYLAFNRMISPFLTQRTKSKFVFASPAKSAETLFKYIAPEQVPVQYGGLSREGEQEFSVADAVTEVTIKPAAKHSVEFPITENCNLVWELRVVGWEVNYGAEFVPTAEDGYTVIVSKTRKVSSADETVISDSFKTGEPGKVVLTIDNQTS 1909 Q+EE EA+ PP PPE+VSIWG+PLLADE+SDVILLKFLRAR+FKVK+AFTM+KNT+ WRKEFG+E L++E LG+ELEKVVFM GFDKEGHPVCYN+YGEFQNKELY+ TF+DEEKR KFLRWRIQFLEKSIRKLDFNP GI T+VQVNDLKNSPGP K ELRQAT AL LLQDNYPEFVAKQVFINVPWWYLA NRMISPFLTQR+KSKFVFA P+KS ETL +YIAPEQ+PV+YGGLS++G EF DAVTE+T++PAAKH+VEF +TE C L WELRV+GWEV+YGAEFVP +E YTVIV K RKV+S++E V+ +SFK GEPGKVVLTIDN +S Sbjct: 225 QAEEKTEAKDEASPPLPPEEVSIWGVPLLADERSDVILLKFLRAREFKVKEAFTMLKNTIRWRKEFGMEELMEEKLGDELEKVVFMHGFDKEGHPVCYNIYGEFQNKELYRKTFSDEEKREKFLRWRIQFLEKSIRKLDFNPGGICTIVQVNDLKNSPGPAKWELRQATKNALQLLQDNYPEFVAKQVFINVPWWYLAVNRMISPFLTQRSKSKFVFAGPSKSTETLLRYIAPEQLPVKYGGLSKDG--EFGNTDAVTEITVRPAAKHTVEFSVTEKCLLSWELRVIGWEVSYGAEFVPDSEGSYTVIVQKARKVASSEEPVVCNSFKVGEPGKVVLTIDNTSS 566
BLAST of g.arboreum_cottongen_reftransV1_0015644 vs. ExPASy TrEMBL
Match: Q9LEN5_CICAR (Putative uncharacterized protein (Fragment) OS=Cicer arietinum PE=2 SV=1) HSP 1 Score: 563.918 bits (1452), Expect = 0.000e+0 Identity = 267/343 (77.84%), Postives = 302/343 (88.05%), Query Frame = 2 Query: 905 EAQVPPPPPEKVSIWGIPLLADEKSDVILLKFLRARDFKVKDAFTMIKNTVSWRKEFGIETLLDEDLGNELE-------KVVFMQGFDKEGHPVCYNVYGEFQNKELYQNTFADEEKRSKFLRWRIQFLEKSIRKLDFNPTGINTMVQVNDLKNSPGPGKKELRQATNQALNLLQDNYPEFVAKQVFINVPWWYLAFNRMISPFLTQRTKSKFVFASPAKSAETLFKYIAPEQVPVQYGGLSREGEQEFSVADAVTEVTIKPAAKHSVEFPITENCNLVWELRVVGWEVNYGAEFVPTAEDGYTVIVSKTRKVSSADETVISDSFKTGEPGKVVLTIDNQTSK 1912 + ++PP PE+V IWGIPLLADE+SDVILLKFLRARDFKVK+AFTMIK TV WRKEFGIE LL EDLG + E KVVF G+DKEGHPVCYNV+GEF+NK+LYQ TF+DEEKR+KF+RWRIQFLEKS+RKL+F P+ I+T VQVNDLKNSPG GK+ELRQATNQAL LLQDNYPEFVAKQ+FINVPWWYLAF+RMIS FLT RTKSKF FA P+KSA+TLFKYIAPEQVPVQYGGLSREG+QEF+ AD TEVTIKPA KH+VEFPI E LVWE+RVVGW+V+YGAEFVP+AEDGYTVIV K RK++ ADETVI+++FK GEPGKVVLTIDNQTSK Sbjct: 125 DVELPPSTPEEVEIWGIPLLADERSDVILLKFLRARDFKVKEAFTMIKQTVIWRKEFGIEGLLQEDLGTDWEDLGTDWDKVVFTDGYDKEGHPVCYNVFGEFENKDLYQKTFSDEEKRNKFIRWRIQFLEKSVRKLNFAPSAISTFVQVNDLKNSPGLGKRELRQATNQALQLLQDNYPEFVAKQIFINVPWWYLAFSRMISAFLTPRTKSKFFFAGPSKSADTLFKYIAPEQVPVQYGGLSREGDQEFTTADPATEVTIKPATKHAVEFPIPEKSTLVWEVRVVGWDVSYGAEFVPSAEDGYTVIVQKNRKIAPADETVINNTFKIGEPGKVVLTIDNQTSK 467
BLAST of g.arboreum_cottongen_reftransV1_0015644 vs. ExPASy TrEMBL
Match: I1KP02_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=2) HSP 1 Score: 559.681 bits (1441), Expect = 0.000e+0 Identity = 261/341 (76.54%), Postives = 297/341 (87.10%), Query Frame = 2 Query: 887 QSEETKEAQVPPPPPEKVSIWGIPLLADEKSDVILLKFLRARDFKVKDAFTMIKNTVSWRKEFGIETLLDEDLGNELEKVVFMQGFDKEGHPVCYNVYGEFQNKELYQNTFADEEKRSKFLRWRIQFLEKSIRKLDFNPTGINTMVQVNDLKNSPGPGKKELRQATNQALNLLQDNYPEFVAKQVFINVPWWYLAFNRMISPFLTQRTKSKFVFASPAKSAETLFKYIAPEQVPVQYGGLSREGEQEFSVADAVTEVTIKPAAKHSVEFPITENCNLVWELRVVGWEVNYGAEFVPTAEDGYTVIVSKTRKVSSADETVISDSFKTGEPGKVVLTIDNQTS 1909 + E TKE PP PPE+ SIWGIPLLADE+SDVILLKFLRAR+FKVK+AFTM+KNT+ WRKEFG+E L++E LG+ELEKVVFM GFDKEGHPVCYN+Y EFQNKELY+ TF+DEEKR KFLRWRIQFLEKSIRKLDFNP GI T+V VNDLKNSPG K ELRQAT AL LLQDNYPEFVAKQVFINVPWWYLA NRMISPFLTQRTKSKFVFA P+KS ETL +YIAPEQ+PV+YGGL ++G EF DAVTE+T++PAAKH+VEF +TENC L WELRV+GWEV+YGAEFVP++E YTVIV K RKV+S++E V+ +SFK GEPGKVVLTIDN +S Sbjct: 220 EPEATKEESSPPLPPEEASIWGIPLLADERSDVILLKFLRAREFKVKEAFTMLKNTIQWRKEFGMEELMEEKLGDELEKVVFMHGFDKEGHPVCYNIYEEFQNKELYKKTFSDEEKREKFLRWRIQFLEKSIRKLDFNPGGICTIVHVNDLKNSPGLAKWELRQATKHALQLLQDNYPEFVAKQVFINVPWWYLAVNRMISPFLTQRTKSKFVFAGPSKSTETLLRYIAPEQLPVKYGGLGKDG--EFGNTDAVTEITVRPAAKHTVEFSVTENCLLSWELRVIGWEVSYGAEFVPSSEGSYTVIVQKARKVASSEEPVLCNSFKVGEPGKVVLTIDNTSS 558
BLAST of g.arboreum_cottongen_reftransV1_0015644 vs. ExPASy TrEMBL
Match: A0A0B2Q6L8_GLYSO (Patellin-5 OS=Glycine soja GN=glysoja_003007 PE=4 SV=1) HSP 1 Score: 559.681 bits (1441), Expect = 0.000e+0 Identity = 261/341 (76.54%), Postives = 297/341 (87.10%), Query Frame = 2 Query: 887 QSEETKEAQVPPPPPEKVSIWGIPLLADEKSDVILLKFLRARDFKVKDAFTMIKNTVSWRKEFGIETLLDEDLGNELEKVVFMQGFDKEGHPVCYNVYGEFQNKELYQNTFADEEKRSKFLRWRIQFLEKSIRKLDFNPTGINTMVQVNDLKNSPGPGKKELRQATNQALNLLQDNYPEFVAKQVFINVPWWYLAFNRMISPFLTQRTKSKFVFASPAKSAETLFKYIAPEQVPVQYGGLSREGEQEFSVADAVTEVTIKPAAKHSVEFPITENCNLVWELRVVGWEVNYGAEFVPTAEDGYTVIVSKTRKVSSADETVISDSFKTGEPGKVVLTIDNQTS 1909 + E TKE PP PPE+ SIWGIPLLADE+SDVILLKFLRAR+FKVK+AFTM+KNT+ WRKEFG+E L++E LG+ELEKVVFM GFDKEGHPVCYN+Y EFQNKELY+ TF+DEEKR KFLRWRIQFLEKSIRKLDFNP GI T+V VNDLKNSPG K ELRQAT AL LLQDNYPEFVAKQVFINVPWWYLA NRMISPFLTQRTKSKFVFA P+KS ETL +YIAPEQ+PV+YGGL ++G EF DAVTE+T++PAAKH+VEF +TENC L WELRV+GWEV+YGAEFVP++E YTVIV K RKV+S++E V+ +SFK GEPGKVVLTIDN +S Sbjct: 220 EPEATKEESSPPLPPEEASIWGIPLLADERSDVILLKFLRAREFKVKEAFTMLKNTIQWRKEFGMEELMEEKLGDELEKVVFMHGFDKEGHPVCYNIYEEFQNKELYKKTFSDEEKREKFLRWRIQFLEKSIRKLDFNPGGICTIVHVNDLKNSPGLAKWELRQATKHALQLLQDNYPEFVAKQVFINVPWWYLAVNRMISPFLTQRTKSKFVFAGPSKSTETLLRYIAPEQLPVKYGGLGKDG--EFGNTDAVTEITVRPAAKHTVEFSVTENCLLSWELRVIGWEVSYGAEFVPSSEGSYTVIVQKARKVASSEEPVLCNSFKVGEPGKVVLTIDNTSS 558
BLAST of g.arboreum_cottongen_reftransV1_0015644 vs. ExPASy TrEMBL
Match: I1K553_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 557.37 bits (1435), Expect = 0.000e+0 Identity = 260/338 (76.92%), Postives = 296/338 (87.57%), Query Frame = 2 Query: 896 ETKEAQVPPPPPEKVSIWGIPLLADEKSDVILLKFLRARDFKVKDAFTMIKNTVSWRKEFGIETLLDEDLGNELEKVVFMQGFDKEGHPVCYNVYGEFQNKELYQNTFADEEKRSKFLRWRIQFLEKSIRKLDFNPTGINTMVQVNDLKNSPGPGKKELRQATNQALNLLQDNYPEFVAKQVFINVPWWYLAFNRMISPFLTQRTKSKFVFASPAKSAETLFKYIAPEQVPVQYGGLSREGEQEFSVADAVTEVTIKPAAKHSVEFPITENCNLVWELRVVGWEVNYGAEFVPTAEDGYTVIVSKTRKVSSADETVISDSFKTGEPGKVVLTIDNQTS 1909 + +E P PPE+VSIWGIPLLADE+SDVILLKFLRAR+F+VK+AFTM+KNT+ WRKEFG+E L++E LG+ELEKVVFM GFDKEGHPVCYN+YGEFQNKELY+ TF+DEEKR KFLRWRIQFLEKSIRKLDFNP GI T+V VNDLKNSPG K ELRQAT AL LLQDNYPEFVAKQVFINVPWWYLA NRMISPFLTQRTKSKFVFA P+KS ETL +YIAPEQ+PV+YGGLS++G EF DAVTE+T++PAAKHSVEF +TENC L WELRV+GWEV YGAEFVP++E YTVIV K RKV+S++E V+ +SFK GEPGKVVLTIDN +S Sbjct: 187 QAEEKASSPLPPEEVSIWGIPLLADERSDVILLKFLRAREFRVKEAFTMLKNTIQWRKEFGMEELMEEKLGDELEKVVFMHGFDKEGHPVCYNIYGEFQNKELYKKTFSDEEKREKFLRWRIQFLEKSIRKLDFNPGGICTIVHVNDLKNSPGLAKWELRQATKHALQLLQDNYPEFVAKQVFINVPWWYLAVNRMISPFLTQRTKSKFVFAGPSKSTETLLRYIAPEQLPVKYGGLSKDG--EFGNIDAVTEITVRPAAKHSVEFSVTENCLLSWELRVIGWEVTYGAEFVPSSEGSYTVIVQKARKVASSEEPVLCNSFKVGEPGKVVLTIDNTSS 522
BLAST of g.arboreum_cottongen_reftransV1_0015644 vs. ExPASy Swiss-Prot
Match: YJX4_SCHPO (CRAL-TRIO domain-containing protein C23B6.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC23B6.04c PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 6.255e-17 Identity = 61/209 (29.19%), Postives = 103/209 (49.28%), Query Frame = 2 Query: 986 ILLKFLRARDFKVKDAFTMIKNTVSWRKEFGIETLLDEDLG--NELEKVVFMQGFDKEGHPVCYNVYGEFQNKELYQNTFADEEKRSKF-LRWRIQFLEKSIRKLDFNPTGINTMVQVNDLKNSPGPGKKELRQATNQALNLLQDNYPEFVAKQVFINVPWWYLAFNRMISPFLTQRTKSKFVFASPAKSAETLFKYIAPEQVPVQYGG 1603 +L++LRA + V +A I +T+ WR+ FG+ + +++ N K V + G+DK+G P C +Y QN K S +R + LE +I D P G+ T+ + + K+S + Q + LN+LQ +Y E + + + IN+PW F ++ISPF+ T+ K F P L +Y+ +Q+ +GG Sbjct: 637 CILRYLRATKWHVSNAKKRIVDTLVWRRHFGVNNMDPDEIQEENATGKQVLL-GYDKDGRP-CLYLYPARQNT-----------KTSPLQIRHLVFSLECAI---DLMPPGVETLALLINFKSSSNRSNPSVGQG-KEVLNILQTHYCERLGRALVINIPWAVWGFFKLISPFIDPITREKLKFNEP------LDRYVPKDQLDSNFGG 822
BLAST of g.arboreum_cottongen_reftransV1_0015644 vs. ExPASy Swiss-Prot
Match: SFH5_VANPO (Phosphatidylinositol transfer protein SFH5 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=SFH5 PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.655e-16 Identity = 64/221 (28.96%), Postives = 107/221 (48.42%), Query Frame = 2 Query: 986 ILLKFLRARDFKVKDAFTMIKNTVSWRKEFGIETLLDEDLGNE-LEKVVFMQGF-DKEGHP--VCYNVYGEF-QNKELYQNTFADEEKRSKFLRWRIQFLEKSIRKLDFNPTGINTMVQVNDLKN-SPGPGKKELRQATNQALNLLQDNYPEFVAKQVFINVP----WWYLAFNRMISPFLTQRTKSKFVFASPAKSAETLFKYIAPEQVPVQYGGLSREG 1618 ++ K +A F T I + ++WRK F + ++ NE L+ V + + D E + V +N+YG+ + KEL++++ SKF+R+RI +E+ +R LDFN N M QV+D K S E++ T Q + + Q YPE + + F+NVP W Y ++ F+ ++T+ KFV + K E YGG ++ Sbjct: 60 LIFKICKAYQFDKTKIITSIVDILNWRKSFNPLSAAYKETHNEALQTVGLLTSYPDDEPNKRVVTWNLYGQIVKKKELFKDS-------SKFIRYRIGLMERGLRLLDFNNDANNYMTQVHDYKGVSMFRLDSEIKACTKQVIAIFQKYYPELLYAKYFVNVPSILSWMY----DLMKSFIDEQTRKKFVVLNDGNKLGNYLKSCPSE----NYGGTDKKN 265
BLAST of g.arboreum_cottongen_reftransV1_0015644 vs. ExPASy Swiss-Prot
Match: SEC14_KLULA (SEC14 cytosolic factor OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SEC14 PE=3 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 2.371e-16 Identity = 65/228 (28.51%), Postives = 104/228 (45.61%), Query Frame = 2 Query: 980 DVILLKFLRARDFKVKDAFTMIKNTVSWRKEFGIETLLDEDLGNELEKVV------FMQGFDKEGHPVCYNVYGEFQNKELYQNTFADEEKRS------KFLRWRIQFLEKSIRKLDFNPTGINTMVQVNDLKNSPGPGKKELRQATNQALNLLQDNYPEFVAKQVFINVPWWYLAFNRMISPFLTQRTKSKFVFASPAKSAETLFKYIAPEQVPVQYGGLSREGEQE 1627 D LL+FLRAR F ++ + M +N WRKEFG++T+ ED E + +V + D +G PV G ++Y+ T + ++ F+R+R+ + L + T + DLK ++ +A N+ Q+ YPE + K IN P+ + R+ PFL T SK +F + + L K I E +P ++GG S E E Sbjct: 53 DSTLLRFLRARKFDLEASKIMYENCEKWRKEFGVDTIF-EDFHYEEKPLVAKYYPQYYHKTDNDGRPVYIEELGSVNLTQMYKITTQERMLKNLVWEYEAFVRYRLPACSRKAGYL------VETSCTILDLKGISISSAAQVLSYVREASNIGQNYYPERMGKFYLINAPFGFSTAFRLFKPFLDPVTVSK-IFILGSSYQKDLLKQIPAENLPKKFGGQSEVSEAE 272
BLAST of g.arboreum_cottongen_reftransV1_0015644 vs. ExPASy Swiss-Prot
Match: S14L3_RAT (SEC14-like protein 3 OS=Rattus norvegicus GN=Sec14l3 PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.683e-16 Identity = 86/349 (24.64%), Postives = 150/349 (42.98%), Query Frame = 2 Query: 980 DVILLKFLRARDFKVKDAFTMIKNTVSWRKEFGIETLLDEDLGNELEKVV--FMQGFDKEGHPVCYNVYGEFQNKELYQNTFADEEKRSKFLRWRIQFLEKSIRKLDFNP----TGINTMVQVNDLKNSPGPGKKE----LRQATNQALNLLQDNYPEFVAKQVFINVPWWYLAFNRMISPFLTQRTKSKFVFASPAKSAETLFKYIAPEQVPVQYGG--------------LSREGE--QEFSVADAV-----TEVTIKPAAKHSVEFPIT-ENCNLVWELRVVGWEVNYGAEFVPT-------AEDGYTVIVSKTRKVSSADETVISDSFKTGEPGKVVLTIDNQTS 1909 D LL++LRAR+F ++ + M++ + +RK I+ +LD ++K + + G+D++G PV Y++ G K L + + L+ +++ E+ + + D I T+V + D + G G K L + + LL++NYPE + + + + ++ PFL++ T+ K V + E L K I+PE++P +GG ++ GE + V D V V I + H VE+ I C L W+ G ++ +G F+ T A + V+ S+ E S E G VL DN S Sbjct: 35 DYFLLRWLRARNFDLQKSEAMLRKYMEFRKTMDIDHILDWQPPEVIQKYMPGGLCGYDRDGCPVWYDIIGPLDPKGLLFSV-----TKQDLLKTKMRDCERILHECDLQTERLGRKIETIVMIFDCE---GLGLKHFWKPLVEVYQEFFGLLEENYPETLKFMLIVKATKLFPVGYNLMKPFLSEDTRRKIVVLGNS-WKEGLLKLISPEELPAHFGGTLTDPDGNPKCLTKINYGGEIPKSMYVRDQVKTQYEHSVQISRGSSHQVEYEILFPGCVLRWQFSSDGADIGFGV-FLKTKMGERQKAGEMTEVLTSQRYNAHMVPE---DGSLTCTEAGVYVLRFDNTYS 370
BLAST of g.arboreum_cottongen_reftransV1_0015644 vs. ExPASy Swiss-Prot
Match: SFH5_LODEL (Phosphatidylinositol transfer protein SFH5 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) GN=SFH5 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.580e-16 Identity = 75/275 (27.27%), Postives = 128/275 (46.55%), Query Frame = 2 Query: 974 KSDVILLKFLRARDFKVKDAFTMIKNTVSWRKEFG-IETLLDEDLGNELEKVVFMQGF---DKEGHPVCYNVYGEFQN-KELYQ--NTFADEEKR-----------------------------SKFLRWRIQFLEKSIRKLDFNPTGINTMVQVNDLKNSP----GPGKKELRQATNQALNLLQDNYPEFVAKQVFINVPW---WYLAFNRMISPFLTQRTKSKFVFASPAKSAETLFKYIAPEQVPVQYGGL-SREGEQEFSVADAVTEVTIK 1666 K + ILLKFL A ++ + A + T +WR EF + DE EL ++ + F + H + +N+YG ++ K+++Q AD+ +R S+FLRWRI +EK+++ +DF + + + Q++D N PG ++ AT + + + NYPE ++ + FINVP W F + I ++ T KF + ETL K +++P YGG+ S +G+ + S+ D +IK Sbjct: 132 KRNEILLKFLAADNYDLDLATKRLIATFNWRNEFQPLHAAFDEKFHQELNELGVITQFASGNDNLHVITWNLYGNLKSPKKIFQKFGEGADDGQREGLAKSSSNSNSSSSSSSSGNNRGKNLPGSQFLRWRIGLMEKALQLVDFTDSKNHKIAQIHDYNNVSMFRIDPG---MKAATKEIIEIFGQNYPELLSTKYFINVPLIMGWVFTFFKTIG-VISAETLKKFQVLNHGDLKETLPK----QELPESYGGVKSAKGDPKRSLFDLDVSESIK 398 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0015644 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pages
BLAST of g.arboreum_cottongen_reftransV1_0015644 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
Pages
InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0015644 ID=g.arboreum_cottongen_reftransV1_0015644; Name=g.arboreum_cottongen_reftransV1_0015644; organism=Gossypium arboreum; type=contig; length=1912bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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