g.arboreum_cottongen_reftransV1_0010184, g.arboreum_cottongen_reftransV1_0010184 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0010184 vs. ExPASy TrEMBL
Match: A0A0D3BZR8_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea GN=ALS1 PE=3 SV=1) HSP 1 Score: 954.896 bits (2467), Expect = 0.000e+0 Identity = 493/624 (79.01%), Postives = 567/624 (90.87%), Query Frame = -3 Query: 152 ERAPLL-NKEANKQTNGQQAAESPLSDLEQGNAEEAVNVGFWRVFALAKPDAGKIFVATFALLIASTTNLLIPKYGGMIIDIVSRDIRTPEQQSEALEAVKNTVTYIVLIVVIGSVSTALRSWLFSSASERVVARLRRDLFSHLIHQEIAFFDVTRTGELLSRLSEDTQIIKNAATTNLSEALRNLTTASIGVAFMFSSSWKLTLLSLAIVPVISVAIRRLGRYLKELSHKTQXXXXXXXXXXXXSFGAIRTVRSFAQEGFAISNYTEKVDETLQLGLKQAKLVGLFFGGVNAAFTFSVMAVVFYGAYLTITGSMTVGSLTSFILYSLTVGSAVSSLSGLYSTAMKAAGASRRVFQLLDRVSSMPKSGDKCPEGNPDGDVELKDVWFAYPSRPSDMILKGITLKLKPGSKVALVGPSGGGKTTIANLIERFYDPLKGEILLNGVPLVEISHEYLHKKVSIVSQEPILFNCSIEENIAYGFXXXXXXXXXXSVAKMANAHEFIDKFPEKYKTVVGERGLRLSGGQKQRIAIARALLMNPKVLLLDEATSALDAESEYLVQDAMDSLMRGRTVLVIAHRLSTVQSADTVAVISNGEIAESGTHEDLLREDGIYTALVRRQLQGPTT 2020 R PLL N + + NG++ E+ +DLE G AE A NVGF RVF+LAKPDAGK+ + T ALLIASTTNLL+PK+GGMIIDIVSRD++TPEQQSE++ AV+N V I+LIVV+GS+ TALRSWLF+SASERVVARLR+DLF HL+HQEIAF+DVT+TGELLSRLSEDTQIIKNAATTNLSEALRN+TTA IGV FMFSSSWKLTLL+L +VP+IS+A+++ GRYL+ELSHKTQAAAAVA+SIAEESFGAIRTVRSFA+E + +S Y++KVDETL+LGLKQA LVGLFFGG+NAAFT SV+ VV YGAYLTITGSMTVG+LTSFILYSLTVGS+VSSLS LY+TAMKAAGASRRVFQ+LDRVSSMP SGDKCP GNPDGDVE+ DVWFAYPSRPS MILKGITL+L PGSKVALVGPSGGGKTTIANLIERFYDP+KG+ILLNGV L+EISH+YLHK++SIVSQEPILFNCS+EENIAYGF G+++ S+IE+ AKMANAHEFI+ FP+KYKTVVGERG+RLSGGQKQRIAIARALL NP+VLLLDEATSALDAESEYLVQDAMDSLM GRTVLVIAHRLSTV++AD VAVIS+G++AE GTHE+LL +GIYT LV+RQLQ ++ Sbjct: 16 HRDPLLQNNQDRTKENGEETIENGKTDLESGVAE-AANVGFGRVFSLAKPDAGKLVIGTIALLIASTTNLLVPKFGGMIIDIVSRDVKTPEQQSESILAVRNAVIVILLIVVVGSLCTALRSWLFNSASERVVARLRKDLFKHLMHQEIAFYDVTKTGELLSRLSEDTQIIKNAATTNLSEALRNVTTALIGVGFMFSSSWKLTLLALVVVPLISIAVKQFGRYLRELSHKTQAAAAVAASIAEESFGAIRTVRSFAKESYMVSQYSKKVDETLKLGLKQAVLVGLFFGGLNAAFTLSVITVVSYGAYLTITGSMTVGALTSFILYSLTVGSSVSSLSSLYTTAMKAAGASRRVFQILDRVSSMPNSGDKCPVGNPDGDVEINDVWFAYPSRPSHMILKGITLRLTPGSKVALVGPSGGGKTTIANLIERFYDPVKGKILLNGVSLMEISHQYLHKQISIVSQEPILFNCSVEENIAYGFDGEATLSDIENAAKMANAHEFIETFPDKYKTVVGERGVRLSGGQKQRIAIARALLTNPRVLLLDEATSALDAESEYLVQDAMDSLMAGRTVLVIAHRLSTVKTADCVAVISDGQVAEKGTHEELLSFNGIYTNLVKRQLQSSSS 638
BLAST of g.arboreum_cottongen_reftransV1_0010184 vs. ExPASy TrEMBL
Match: I1GN65_BRADI (Uncharacterized protein OS=Brachypodium distachyon GN=BRADI1G08280 PE=3 SV=1) HSP 1 Score: 948.347 bits (2450), Expect = 0.000e+0 Identity = 486/620 (78.39%), Postives = 550/620 (88.71%), Query Frame = -3 Query: 158 RAPLLNKEANKQTNGQQAAESPLSDLEQGNAEEAVNVGFWRVFALAKPDAGKIFVATFALLIASTTNLLIPKYGGMIIDIVSRDIRTPEQQSEALEAVKNTVTYIVLIVVIGSVSTALRSWLFSSASERVVARLRRDLFSHLIHQEIAFFDVTRTGELLSRLSEDTQIIKNAATTNLSEALRNLTTASIGVAFMFSSSWKLTLLSLAIVPVISVAIRRLGRYLKELSHKTQXXXXXXXXXXXXSFGAIRTVRSFAQEGFAISNYTEKVDETLQLGLKQAKLVGLFFGGVNAAFTFSVMAVVFYGAYLTITGSMTVGSLTSFILYSLTVGSAVSSLSGLYSTAMKAAGASRRVFQLLDRVSSMPKSGDKCPEGNPDGDVELKDVWFAYPSRPSDMILKGITLKLKPGSKVALVGPSGGGKTTIANLIERFYDPLKGEILLNGVPLVEISHEYLHKKVSIVSQEPILFNCSIEENIAYGFXXXXXXXXXXSVAKMANAHEFIDKFPEKYKTVVGERGLRLSGGQKQRIAIARALLMNPKVLLLDEATSALDAESEYLVQDAMDSLMRGRTVLVIAHRLSTVQSADTVAVISNGEIAESGTHEDLLREDGIYTALVRRQLQGP 2017 RAPLLN +G+ + LSDLE+GN +A NVGF RV LAK DAGK+ AT ALL+AS +NLL+PKYGG IIDIVSRD++ PE +++AL V T+ YIV+IV+ GSV TALR+WLF+SASERVVARLR+DLFSHLI+QEIAFFDVTRTGELLSRLSEDTQIIKNAATTNLSEALRN+TT +IG+ FMF++SWKLTLLSL IVPVISVA+RR GR+L+ELSH+TQAAAAVASSIAEESFGAIRTVR+FAQE IS Y EKV+ETL+LGLKQAK+VGLF GG+NAA T SV+ VV YGA LTI G MT GSLTSFILYSLTVGS+VS+LSGLY+T MKA+GASRRVFQLLDR+SSM SGDKCP+ DG+VEL DVWFAYPSRPS MILKGITLKL PGSKVALVGPSGGGKTTIANLIERFYDPLKG+ILLNGVPLVEISH+YLH+KVSIVSQEP+LFNCSIEENIAYG K+S++E+E+ AKMANAH+FI FPE+YKTVVGERG+RLSGGQKQR+AIARALLMNP+VLLLDEATSALDAESEYLVQDAMDSLM+GRTVLVIAHRLSTV+SADTVAVIS+G+I ESGTH++LL DGIYTALV+RQLQ P Sbjct: 15 RAPLLN-------HGETS--RALSDLEEGNNVQAANVGFCRVIKLAKHDAGKLIFATIALLVASLSNLLVPKYGGKIIDIVSRDVQQPEDKAQALADVNGTIFYIVIIVITGSVCTALRAWLFNSASERVVARLRQDLFSHLINQEIAFFDVTRTGELLSRLSEDTQIIKNAATTNLSEALRNVTTTAIGLGFMFTTSWKLTLLSLVIVPVISVAVRRFGRFLRELSHQTQAAAAVASSIAEESFGAIRTVRAFAQEPHEISRYGEKVNETLKLGLKQAKVVGLFSGGLNAASTLSVVIVVIYGANLTINGYMTTGSLTSFILYSLTVGSSVSALSGLYTTVMKASGASRRVFQLLDRISSMTNSGDKCPKNEIDGEVELDDVWFAYPSRPSHMILKGITLKLAPGSKVALVGPSGGGKTTIANLIERFYDPLKGKILLNGVPLVEISHQYLHRKVSIVSQEPVLFNCSIEENIAYGLESKASTAEVENAAKMANAHDFICGFPEQYKTVVGERGIRLSGGQKQRVAIARALLMNPRVLLLDEATSALDAESEYLVQDAMDSLMKGRTVLVIAHRLSTVKSADTVAVISDGQIVESGTHDELLDRDGIYTALVKRQLQLP 625
BLAST of g.arboreum_cottongen_reftransV1_0010184 vs. ExPASy TrEMBL
Match: F6H485_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0068g00210 PE=3 SV=1) HSP 1 Score: 948.347 bits (2450), Expect = 0.000e+0 Identity = 478/614 (77.85%), Postives = 554/614 (90.23%), Query Frame = -3 Query: 152 ANKQTNGQQAAESPLSDLEQGNAEEAVNVGFWRVFALAKPDAGKIFVATFALLIASTTNLLIPKYGGMIIDIVSRDIRTPEQQSEALEAVKNTVTYIVLIVVIGSVSTALRSWLFSSASERVVARLRRDLFSHLIHQEIAFFDVTRTGELLSRLSEDTQIIKNAATTNLSEALRNLTTASIGVAFMFSSSWKLTLLSLAIVPVISVAIRRLGRYLKELSHKTQXXXXXXXXXXXXSFGAIRTVRSFAQEGFAISNYTEKVDETLQLGLKQAKLVGLFFGGVNAAFTFSVMAVVFYGAYLTITGSMTVGSLTSFILYSLTVGSAVSSLSGLYSTAMKAAGASRRVFQLLDRVSSMPKSGDKCPEGNPDGDVELKDVWFAYPSRPSDMILKGITLKLKPGSKVALVGPSGGGKTTIANLIERFYDPLKGEILLNGVPLVEISHEYLHKKVSIVSQEPILFNCSIEENIAYGFXXXXXXXXXXSVAKMANAHEFIDKFPEKYKTVVGERGLRLSGGQKQRIAIARALLMNPKVLLLDEATSALDAESEYLVQDAMDSLMRGRTVLVIAHRLSTVQSADTVAVISNGEIAESGTHEDLLREDGIYTALVRRQLQGPTT 1993 A K+ N QAA PL+DLE+G+A++A VGF+RVF LAKP AGK+ +AT ALLI ST+ ++IPKY G+IIDIVSRDIRTPEQQSEAL AVKN V IV+IVV+GS+ +AL WLF+S SER+VARLR+DLFSHLI+QEIAFFDVT+TGELLSRLSED+QIIKN AT+NLS AL ++TTA+I ++FMFSSSWKLTLL+LA+VPVISVA R+ G +L+ELS+ TQAAAA ASS+A+ESFGAIRTVRSFAQEG+AIS+Y+EKVD TL+LGL+QAKLV LF+GG++AA T S++ V+ YGA LTI S+T GSLTSFILY TV S+VSSL+GLY+ MKAAGASRRVFQLLDRVS+MP SG++CP GNPDGDVEL D+WFAYPSRPS MILKGITLKL+PGSKVALVGPSGGGKTTIA LIERFYDPLKG+ILLNGVPLVEISH+YLHKK+SIVSQEP+LFNCS+EENIAYGF GK+SSSEIE AKMANAH+FI+ FPEKY+TVVGERGLRLSGGQKQRIAIARALLM+P+VLLLDEATSALDAESEYLVQDAM+SLMRGRTVLVIAHRLSTV+SADTVAVIS+G IAESG HE+LL ++GIYT LV+RQLQGP+T Sbjct: 625 AEKKPNDDQAANDPLTDLERGDADQAAKVGFFRVFFLAKPYAGKLIIATIALLIESTSRVMIPKYCGIIIDIVSRDIRTPEQQSEALVAVKNAVLDIVMIVVLGSLCSALEEWLFASVSERIVARLRKDLFSHLINQEIAFFDVTKTGELLSRLSEDSQIIKNVATSNLSSALTSITTAAITLSFMFSSSWKLTLLALAVVPVISVAARKFGYHLRELSNTTQAAAAEASSMAQESFGAIRTVRSFAQEGYAISSYSEKVDHTLKLGLRQAKLVALFYGGLDAASTLSLITVMVYGAILTIARSITTGSLTSFILYCFTVRSSVSSLAGLYTAGMKAAGASRRVFQLLDRVSTMPISGNECPLGNPDGDVELDDIWFAYPSRPSHMILKGITLKLRPGSKVALVGPSGGGKTTIAGLIERFYDPLKGKILLNGVPLVEISHKYLHKKISIVSQEPVLFNCSVEENIAYGFDGKASSSEIEHAAKMANAHDFIENFPEKYRTVVGERGLRLSGGQKQRIAIARALLMDPRVLLLDEATSALDAESEYLVQDAMESLMRGRTVLVIAHRLSTVKSADTVAVISDGRIAESGNHEELLSKNGIYTGLVKRQLQGPST 1238 HSP 2 Score: 890.567 bits (2300), Expect = 0.000e+0 Identity = 461/590 (78.14%), Postives = 531/590 (90.00%), Query Frame = -3 Query: 152 EAVNVGFWRVFALAKPDAGKIFVATFALLIASTTNLLIPKYGGMIIDIVSRDIRTPEQQSEALEAVKNTVTYIVLIVVIGSVSTALRSWLFSSASERVVARLRRDLFSHLIHQEIAFFDVTRTGELLSRLSEDTQIIKNAATTNLSEALRNLTTASIGVAFMFSSSWKLTLLSLAIVPVISVAIRRLGRYLKELSHKTQXXXXXXXXXXXXSFGAIRTVRSFAQEGFAISNYTEKVDETLQLGLKQAKLVGLFFGGVNAAFTFSVMAVVFYGAYLTITGSMTVGSLTSFILYSLTVGSAVSSLSGLYSTAMKAAGASRRVFQLLDRVSSMPKSGDKCPEGNPDGDVELKDVWFAYPSRPSDMILKGITLKLKPGSKVALVGPSGGGKTTIANLIERFYDPLKGEILLNGVPLVEISHEYLHKKVSIVSQEPILFNCSIEENIAYGFXXXXXXXXXXSVAKMANAHEFIDKFPEKYKTVVGERGLRLSGGQKQRIAIARALLMNPKVLLLDEATSALDAESEYLVQDAMDSLMRGRTVLVIAHRLSTVQSADTVAVISNGEIAESGTHEDLLREDGIYTALVRRQLQGPTT 1921 +A VGF+RVF+LAKP+AGK+ VAT ALL+AST+ +++PKYGGM+IDIVSRDIRTPEQQSEAL AVKN +VL+VV+GS+ A+R WLF+S SER+VA LR+DLFSHLI+Q+IAFFDVT TGELLSRLSED+QIIKN AT+NLS AL ++T IG+ FMFSSSWKLTLL LA+VPV+SVA GRYL+ELSHKTQAAAAVA S+AEESFGAI+TVRSFAQEG+AIS+Y+EKV ETL+L L+Q+KLV LF+GG+NA FT S++ VV YGA LTI SMT GSL SFILYSLTVG ++ SL GLY+TAMKAAGASRRVFQLLDRVS MP SG KCP GNPDGDVEL D+WFAYPSRPS MILKGI+LKL+PGSKVALVGPSGGGKTTIA+LIERFYDPLKG+ILLNGVPLVEISH+YLHKK+SIVSQEP+LFNCS+EENIAYGF GK+SSSEIE+ AKMANAH+FI FPEKY+TVVGERGLRLSGGQKQRIAIARALLM+P+VLLLDEATSALDAESEYLVQDAM+SLMRGRTVLVIAHRLSTV++AD VAVI +G IA+SG+HE+LL ++GIYT LV+RQLQGP+T Sbjct: 23 QAAKVGFFRVFSLAKPEAGKLIVATIALLVASTSIVMLPKYGGMVIDIVSRDIRTPEQQSEALTAVKNAALAVVLMVVLGSLCVAVREWLFASVSERIVAHLRKDLFSHLINQDIAFFDVTPTGELLSRLSEDSQIIKNVATSNLSSALTSITIVFIGLGFMFSSSWKLTLLVLALVPVVSVAAHVFGRYLRELSHKTQAAAAVACSMAEESFGAIQTVRSFAQEGYAISSYSEKVHETLKLALRQSKLVALFYGGINAVFTLSIVIVVVYGASLTIARSMTAGSLASFILYSLTVGISMLSLFGLYTTAMKAAGASRRVFQLLDRVSPMPISGHKCPLGNPDGDVELDDIWFAYPSRPSHMILKGISLKLRPGSKVALVGPSGGGKTTIASLIERFYDPLKGKILLNGVPLVEISHKYLHKKISIVSQEPVLFNCSVEENIAYGFDGKASSSEIENAAKMANAHDFIANFPEKYRTVVGERGLRLSGGQKQRIAIARALLMDPRVLLLDEATSALDAESEYLVQDAMESLMRGRTVLVIAHRLSTVKTADIVAVICDGRIAQSGSHEELLSKNGIYTGLVKRQLQGPST 612
BLAST of g.arboreum_cottongen_reftransV1_0010184 vs. ExPASy TrEMBL
Match: K4A6V9_SETIT (Uncharacterized protein OS=Setaria italica GN=Si034614m.g PE=3 SV=1) HSP 1 Score: 945.266 bits (2442), Expect = 0.000e+0 Identity = 485/620 (78.23%), Postives = 546/620 (88.06%), Query Frame = -3 Query: 158 RAPLLNKEANKQTNGQQAAESPLSDLEQGNAEEAVNVGFWRVFALAKPDAGKIFVATFALLIASTTNLLIPKYGGMIIDIVSRDIRTPEQQSEALEAVKNTVTYIVLIVVIGSVSTALRSWLFSSASERVVARLRRDLFSHLIHQEIAFFDVTRTGELLSRLSEDTQIIKNAATTNLSEALRNLTTASIGVAFMFSSSWKLTLLSLAIVPVISVAIRRLGRYLKELSHKTQXXXXXXXXXXXXSFGAIRTVRSFAQEGFAISNYTEKVDETLQLGLKQAKLVGLFFGGVNAAFTFSVMAVVFYGAYLTITGSMTVGSLTSFILYSLTVGSAVSSLSGLYSTAMKAAGASRRVFQLLDRVSSMPKSGDKCPEGNPDGDVELKDVWFAYPSRPSDMILKGITLKLKPGSKVALVGPSGGGKTTIANLIERFYDPLKGEILLNGVPLVEISHEYLHKKVSIVSQEPILFNCSIEENIAYGFXXXXXXXXXXSVAKMANAHEFIDKFPEKYKTVVGERGLRLSGGQKQRIAIARALLMNPKVLLLDEATSALDAESEYLVQDAMDSLMRGRTVLVIAHRLSTVQSADTVAVISNGEIAESGTHEDLLREDGIYTALVRRQLQGP 2017 R PLL NG+ + LSDLE+G+ + NVGF RV LA+ DAGK+ +AT ALL+AS +N+L+PKYGG IIDIVSRD+R PE +++ALE VK T+ YIVLIVV+GSV TALR+WLF+SASERVVARLR+DLFSHLI+QEIAFFDVTRTGELLSRLSEDTQIIKNAATTNLSEALRN+TT +IG+ FMFS+SWKLTLL+L IVPVISVA+R GR+L+ELSH+TQAAAAVASSIAEESFGAIRTVRSFAQE IS Y EKV+ETL+LGLKQAK+VGLF GG+NAA T SV+ VV YGA LTI G MT GSLTSFILYSLTVGS+VS+LSGLY+T MKA+GASRRVFQLLDRVSSMP SGD+CP DG+VEL DVWFAYPSRP+ MILKGITLKL PGSKVALVGPSGGGKTTIANLIERFYDPLKG ILLN VPLVEISH+YLH KVSIVSQEP LFNC+IEENIAYG GK++ +++ES AKMANAH FI FP++YKTVVGERG+RLSGGQKQRIAIARALLMNP+VLLLDEATSALDAESEYLVQDAMDSLM+GRTVLVIAHRLSTV+SADTVAVIS+G+I ESGTH++LL DGIYTALV+RQLQGP Sbjct: 15 RIPLLG-------NGETS--RALSDLEEGSNVQPANVGFCRVIKLARHDAGKLVLATIALLVASLSNILVPKYGGKIIDIVSRDVRRPEDKAQALEDVKGTILYIVLIVVVGSVCTALRAWLFNSASERVVARLRKDLFSHLINQEIAFFDVTRTGELLSRLSEDTQIIKNAATTNLSEALRNITTTAIGLGFMFSTSWKLTLLALVIVPVISVAVRSFGRFLRELSHQTQAAAAVASSIAEESFGAIRTVRSFAQESHEISRYGEKVEETLKLGLKQAKVVGLFSGGLNAASTLSVVIVVIYGANLTINGYMTTGSLTSFILYSLTVGSSVSALSGLYTTVMKASGASRRVFQLLDRVSSMPNSGDQCPTNEQDGEVELDDVWFAYPSRPNHMILKGITLKLAPGSKVALVGPSGGGKTTIANLIERFYDPLKGRILLNRVPLVEISHQYLHNKVSIVSQEPTLFNCTIEENIAYGLEGKTNFADVESAAKMANAHNFICSFPDQYKTVVGERGIRLSGGQKQRIAIARALLMNPRVLLLDEATSALDAESEYLVQDAMDSLMKGRTVLVIAHRLSTVKSADTVAVISDGQIVESGTHDELLARDGIYTALVKRQLQGP 625
BLAST of g.arboreum_cottongen_reftransV1_0010184 vs. ExPASy TrEMBL
Match: A0A0D2N6P7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G075900 PE=3 SV=1) HSP 1 Score: 944.495 bits (2440), Expect = 0.000e+0 Identity = 474/625 (75.84%), Postives = 555/625 (88.80%), Query Frame = -3 Query: 146 ERAPLLNKEANKQTNGQQAAESPLSDLEQGNAEEAVNVGFWRVFALAKPDAGKIFVATFALLIASTTNLLIPKYGGMIIDIVSRDIRTPEQQSEALEAVKNTVTYIVLIVVIGSVSTALRSWLFSSASERVVARLRRDLFSHLIHQEIAFFDVTRTGELLSRLSEDTQIIKNAATTNLSEALRNLTTASIGVAFMFSSSWKLTLLSLAIVPVISVAIRRLGRYLKELSHKTQXXXXXXXXXXXXSFGAIRTVRSFAQEGFAISNYTEKVDETLQLGLKQAKLVGLFFGGVNAAFTFSVMAVVFYGAYLTITGSMTVGSLTSFILYSLTVGSAVSSLSGLYSTAMKAAGASRRVFQLLDRVSSMPKSGDKCPEGNPDGDVELKDVWFAYPSRPSDMILKGITLKLKPGSKVALVGPSGGGKTTIANLIERFYDPLKGEILLNGVPLVEISHEYLHKKVSIVSQEPILFNCSIEENIAYGFXXXXXXXXXXSVAKMANAHEFIDKFPEKYKTVVGERGLRLSGGQKQRIAIARALLMNPKVLLLDEATSALDAESEYLVQDAMDSLMRGRTVLVIAHRLSTVQSADTVAVISNGEIAESGTHEDLLREDGIYTALVRRQLQGPTTKI 2020 ERAPLL++ ++ NG + L+DLE G+A A NV F RV +LAKPDAGK+ VAT ALLIAST+++LIPK+GG IIDIVS DI PEQ+ EAL A++NT+ I LIV++GSV TALR+WLFSSASERVVARLR++LFSHLI+QEIAFFD+TRTGELLSRLSEDTQIIKNAATTNLSEALRNL+T IG+ FMF++SWKLTLL+L +VP IS+A+R+ GR+L+ELSHKTQ AAA A+S+AEESFGAIRTVRSFAQE + IS Y++KVDETL LGLKQAK+VGLFFGG+NAA T SV+ VV YGA LTITG MT G+LTSFILYSLTVGS+VS LSGLY+ AMKAAGASRRVFQLLDRVSSMPKSG+KCP G+ D +V+L DVWFAY SRP+ M+LKGITLKL+PGSKVALVGPSGGGK+TIANLIERFYDP+KG+ILLNGVPL+EISHE+LH+K+SIVSQEP+LFNCSIE+NIAYG G+ + ++IE+ AKMANAHEFI KFP+KY+T VGERG+RLSGGQKQR+AIARALLM+PK+LLLDEATSALDAESEYLVQDAMDSLM+GRTVLVIAHRLSTVQSADTVAV+S+G+I ESG HE+LL +DG+YTALVRRQLQ T + Sbjct: 7 ERAPLLDRGGRRKANGN--TDDNLTDLEHGDAIPAANVSFTRVLSLAKPDAGKLIVATIALLIASTSSILIPKFGGRIIDIVSGDIGMPEQKVEALAAIRNTILDIFLIVIVGSVCTALRAWLFSSASERVVARLRKNLFSHLINQEIAFFDITRTGELLSRLSEDTQIIKNAATTNLSEALRNLSTTFIGLGFMFATSWKLTLLALVVVPAISIAVRQFGRFLRELSHKTQVAAAAAASVAEESFGAIRTVRSFAQEEYEISRYSQKVDETLNLGLKQAKVVGLFFGGLNAASTLSVIVVVIYGANLTITGLMTPGALTSFILYSLTVGSSVSGLSGLYTVAMKAAGASRRVFQLLDRVSSMPKSGNKCPLGDQD-EVQLDDVWFAYSSRPNHMVLKGITLKLQPGSKVALVGPSGGGKSTIANLIERFYDPIKGKILLNGVPLLEISHEHLHRKISIVSQEPVLFNCSIEKNIAYGCEGRVNITDIENAAKMANAHEFISKFPDKYQTHVGERGVRLSGGQKQRVAIARALLMDPKILLLDEATSALDAESEYLVQDAMDSLMKGRTVLVIAHRLSTVQSADTVAVVSDGQIVESGNHEELLSKDGVYTALVRRQLQATKTNL 628
BLAST of g.arboreum_cottongen_reftransV1_0010184 vs. ExPASy Swiss-Prot
Match: AB4B_ARATH (ABC transporter B family member 4 OS=Arabidopsis thaliana GN=ABCB4 PE=1 SV=1) HSP 1 Score: 358.221 bits (918), Expect = 2.063e-106 Identity = 225/594 (37.88%), Postives = 358/594 (60.27%), Query Frame = -3 Query: 167 EAVNVGFWRVFALAKPDAGKIFVATFALLIASTTNLLIPKYGGMIIDIVSRDIRTPEQQSEALEAVKNTVTYIVLIVVIGSVST---ALRSWLFSSASERVVARLRRDLFSHLIHQEIAFFDV--TRTGELLSRLSEDTQIIKNAATTNLSEALRNLTTASIGVAFMFSSSWKLTLLSLAIVPVISVAIRRLGRYLKELSHKTQXXXXXXXXXXXXSFGAIRTVRSFAQEGFAISNYTEKVDETLQLGLKQAKLVGLFFGGVNAAFTFSVMAVVFY-GAYLTITGSMTVGSLTSFILYSLTVGS-AVSSLSGLYSTAMKAAGASRRVFQLLDRVSSM-PKSGDKCPEGNPDGDVELKDVWFAYPSRPSDMILKGITLKLKPGSKVALVGPSGGGKTTIANLIERFYDPLKGEILLNGVPLVEISHEYLHKKVSIVSQEPILFNCSIEENIAYGFXXXXXXXXXXSVAKMANAHEFIDKFPEKYKTVVGERGLRLSGGQKQRIAIARALLMNPKVLLLDEATSALDAESEYLVQDAMDSLMRGRTVLVIAHRLSTVQSADTVAVISNGEIAESGTHEDLLR-EDGIYTALVRRQL 1921 E V +R+ AL KP+ I V + A+ +++P +G +I ++ + P++ E +T + ++ +V+G S +++ F+ A ++V R+R F ++H E+ +FD +G + +RLS D I+ +L++ ++NL++ G+ F + W+L + LA++P+I++ +++K S + AS +A ++ G+IRTV SF E ++ Y++K + ++ G++Q + G+ FG + FS A FY GA L G T S+ + ++LT+ + A+S S L + KA A+ +F ++DR S + P N GD+EL+ V F YP+RP I + + L ++ G VALVG SG GK+T+ L++RFYDP GEI L+GV + + ++L ++ +VSQEPILFN +I NIAYG G +S SEI S A+++NAH FI + Y T+VGERG++LSGGQKQR+AIARA++ +PKVLLLDEATSALDAESE +VQDA+D +M RT +V+AHRLST+++AD +AV+ NG I E G H+ L+ +DG+Y +LV+ L Sbjct: 700 EPKKVSIFRIAALNKPE---IPVLILGSISAAANGVILPIFGILISSVIKAFFQPPKKLKE------DTSFWAIIFMVLGFASIIAYPAQTFFFAIAGCKLVQRIRSMCFEKVVHMEVGWFDEPENSSGTIGARLSADAATIRGLVGDSLAQTVQNLSSILAGLIIAFLACWQLAFVVLAMLPLIALNGFLYMKFMKGFSADAKKMYGEASQVANDAVGSIRTVASFCAEDKVMNMYSKKCEGPMKNGIRQGIVSGIGFG-FSFFVLFSSYAASFYVGARLVDDGKTTFDSVFR-VFFALTMAAMAISQSSSLSPDSSKADVAAASIFAIMDRESKIDPSVESGRVLDNVKGDIELRHVSFKYPARPDVQIFQDLCLSIRAGKTVALVGESGSGKSTVIALLQRFYDPDSGEITLDGVEIKSLRLKWLRQQTGLVSQEPILFNETIRANIAYGKGGDASESEIVSSAELSNAHGFISGLQQGYDTMVGERGIQLSGGQKQRVAIARAIVKDPKVLLLDEATSALDAESERVVQDALDRVMVNRTTIVVAHRLSTIKNADVIAVVKNGVIVEKGKHDTLINIKDGVYASLVQLHL 1282 HSP 2 Score: 351.288 bits (900), Expect = 7.178e-104 Identity = 225/590 (38.14%), Postives = 352/590 (59.66%), Query Frame = -3 Query: 170 VGFWRVFALAKPDAGKIFVATFALLIASTTNLLIPKYGGMIIDIVSRDIRTP--EQQSEALEAVKNTVTYIVLIVVIGSVSTA---LRSWLFSSASERVVARLRRDLFSHLIHQEIAFFDV-TRTGELLSRLSEDTQIIKNAATTNLSEALRNLTTASIGVAFMFSSSWKLTLLSLAIVPVISVAIRRLGRYLKELSHKTQXXXXXXXXXXXXSFGAIRTVRSFAQEGFAISNYTEKVDETLQLGLKQAKLVGLFFGGVNAAFTFSVMAVVFYGAYLTITGSMTVGSLTSFILYSLTVGSAVSSLSGLYSTAMKAAGASRRVFQLLDR---VSSMPKSGDKCPEGNPDGDVELKDVWFAYPSRPSDMILKGITLKLKPGSKVALVGPSGGGKTTIANLIERFYDPLKGEILLNGVPLVEISHEYLHKKVSIVSQEPILFNCSIEENIAYGFXXXXXXXXXXSVAKMANAHEFIDKFPEKYKTVVGERGLRLSGGQKQRIAIARALLMNPKVLLLDEATSALDAESEYLVQDAMDSLMRGRTVLVIAHRLSTVQSADTVAVISNGEIAESGTHEDLLRE-DGIYTALVRRQ 1909 V F+++FA A F L+I T + G ++ ++ D+ E Q+ + V V + IG+ + A L W+ S ER AR+R ++ Q+IAFFD+ T TGE++ R+S DT +I++A + +A++ L T G F W LTL+ L+ +P++ +A L + + + + Q A A A+++ E++ G+IRTV SF E AISNY + + + G+ + GL G + S V+YG L + T G + + I+ LT ++ S S A+ ++F+ ++R + S +G + GD+ELKDV+F YP+RP + I +G +L + G+ VALVG SG GK+T+ +LIERFYDP G++L++G+ L E +++ K+ +VSQEP+LF SI++NIAYG +++ EI++ A++ANA +F+DK P+ T+VGE G +LSGGQKQRIA+ARA+L +P++LLLDEATSALDAESE +VQ+A+D +M RT +V+AHRLSTV++AD +AVI G+I E G+H +LL++ +G Y+ L+R Q Sbjct: 46 VPFYKLFAFADS-------FDFLLMILGTLGSIGNGLGFPLMTLLFGDLIDAFGENQTNTTDKVSKVALKFVWLG-IGTFAAAFLQLSGWMISG--ERQAARIRSLYLKTILRQDIAFFDIDTNTGEVVGRMSGDTVLIQDAMGEKVGKAIQLLATFVGGFVIAFVRGWLLTLVMLSSIPLLVMAGALLAIVIAKTASRGQTAYAKAATVVEQTIGSIRTVASFTGEKQAISNYNKHLVTAYKAGVIEGGSTGLGLGTLFLVVFCSYALAVWYGGKLILDKGYTGGQVLNIIIAVLTGSMSLGQTSPCLSAFAAGQAAAYKMFETIERRPNIDSYSTNGKVLDD--IKGDIELKDVYFTYPARPDEQIFRGFSLFISSGTTVALVGQSGSGKSTVVSLIERFYDPQAGDVLIDGINLKEFQLKWIRSKIGLVSQEPVLFTASIKDNIAYG-KEDATTEEIKAAAELANASKFVDKLPQGLDTMVGEHGTQLSGGQKQRIAVARAILKDPRILLLDEATSALDAESERVVQEALDRIMVNRTTVVVAHRLSTVRNADMIAVIHQGKIVEKGSHTELLKDPEGAYSQLIRLQ 622
BLAST of g.arboreum_cottongen_reftransV1_0010184 vs. ExPASy Swiss-Prot
Match: ABCB2_DICDI (ABC transporter B family member 2 OS=Dictyostelium discoideum GN=abcB2 PE=3 SV=1) HSP 1 Score: 358.221 bits (918), Expect = 6.266e-106 Identity = 221/609 (36.29%), Postives = 344/609 (56.49%), Query Frame = -3 Query: 170 LSDLEQGNAEEAVNVGFWRVFALAKP-DAGKIFVATFALLIASTTNLLIPKYGGMIIDIVSRDIRTPEQQSEALEAVKNTVTYIVLIVVIGSVSTALRSWLFSSASERVVARLRRDLFSHLIHQEIAFFDVTRTGELLSRLSEDTQIIKNAATTNLSEALRNLTTASIGVAFMFSSSWKLTLLSLAIVPVISVAIRRLGRYLKELSHKTQXXXXXXXXXXXXSFGAIRTVRSFAQEGFAISNYTEKVDETLQLGLKQAKLVGLFFGGVNAAFTFSVMAVVFYGAYLTI------------TGSMTVGSLTSFILYSLTVGSAVSSLSGLYSTAMKAAGASRRVFQLLDRVSSM-PKSGD-KCPEGNPDGDVELKDVWFAYPSRPSDMILKGITLKLKPGSKVALVGPSGGGKTTIANLIERFYDPLKGEILLNGVPLVEISHEYLHKKVSIVSQEPILFNCSIEENIAYGFXXXXXXXXXXSVAKMANAHEFIDKFPEKYKTVVGERGLRLSGGQKQRIAIARALLMNPKVLLLDEATSALDAESEYLVQDAMDSLMRGRTVLVIAHRLSTVQSADTVAVISNGEIAESGTHEDLLREDGIYTALVRRQ 1951 L + E+ E V F+ +F AKP D + + T L + I G +++ S + + + +E V + Y + I V + + + A ER R R+ ++ QEI ++DVT++ EL +R+S DT + + A + L + +T G F + W+LTL+ A+ P+I+ A + + + +L+ K Q A A A +AEE G+IRTV +F+ E F + YTE++ E L +G K+ + G+ G V + +YG L + G + S I+ ++ +G A +++ GA+ ++++++DR S + P S + + E G++E +++ F+YPSRP I L +K G+ VALVG SGGGK+++ L+ERFYDP +GE+ L+G + EI+ L + + +VSQEP+LF SI ENI YG + ++ +I K ANAH+FI PE Y T VGE+G+++SGGQKQRIAIARA++ +PK+LLLDEATSALD+++E LVQ +++ LM GRT +VIAHRLST+Q AD +AV+ G I E GTH +L +G+YT LV RQ Sbjct: 109 LDEGEKKEGEVGPQVPFFSLFRFAKPFDILLMIIGTIGALANGVSMPAISIVFGRLMNSFSPE-NLADPNFDLVETVTSNAMYFIYIGCGVFVCSYVEVAFWMLAGERQAVRCRKAYLKAILKQEIGWYDVTKSSELSTRISSDTLLFQEAIGEKIGNFLHHTSTFICGFIVGFVNGWQLTLVIFALTPLIAAAGAFMTKMMADLTKKGQDAYAKAGGVAEEKIGSIRTVSTFSGEPFEVKRYTERLKEALDIGTKKGIMNGIGIGLVFLVLFGTYSLSFWYGGKLIVDRKWNPVPDRPWQGGDVLTVFFSVIMGAMALGQASPNVASF----ANGRGAAFKIYEVVDRNSKIDPFSTEGRSIEETVQGNIEYRNIGFSYPSRPDVKIFNNFNLTIKKGTTVALVGDSGGGKSSVIGLLERFYDPDEGEVYLDGTNIKEINIHSLRRNIGLVSQEPVLFANSIAENIRYG-NENATMDQIIEACKTANAHDFISALPEGYDTQVGEKGVQMSGGQKQRIAIARAMIKDPKILLLDEATSALDSQNELLVQQSIEKLMIGRTTIVIAHRLSTIQDADQIAVVKGGAIVEIGTHPELYALNGVYTQLVNRQ 711 HSP 2 Score: 330.487 bits (846), Expect = 2.643e-96 Identity = 213/622 (34.24%), Postives = 338/622 (54.34%), Query Frame = -3 Query: 167 RVFALAKPDAGKIFVATFALLIASTTN-LLIPKYGGMIIDIVSRDIRTPEQQSEALEAVKNTVTYIVLIVVIGSVSTALRSWLFSSASERVVARLRRDLFSHLIHQEIAFFDVTR--TGELLSRLSEDTQIIKNAATTNLSEALRNLTTASIGVAFMFSSSWKLTLLSLAIVPVISVAIRRLGRYLKELSHKTQXXXXXXXXXXXXSFGAIRTVRSFAQEGFAISNYTEKVDETLQLGLKQAKLVGLFFGGVNAAFTFSVMAVVFYGAYLTITG---------------------------------------SMTVGSLTSFILYSLTVGSAVSSLSGLYSTAMKAAGASRRVFQLLDRVSSMP---KSGDKCPEGNPDGDVELKDVWFAYPSRPSDMILKGITLKLKPGSKVALVGPSGGGKTTIANLIERFYDPLKGEILLNGVPLVEISHEYLHKKVSIVSQEPILFNCSIEENIAYGFXXXXXXXXXXSVAKMANAHEFIDKFPEKYKTVVGERGLRLSGGQKQRIAIARALLMNPKVLLLDEATSALDAESEYLVQDAMDSLMRGRTVLVIAHRLSTVQSADTVAVISNGEIAESGTHEDLLREDGIYTALVRRQL 1897 R+ L++ D + L+ +T N ++P + + +I+ I + E +N + +L+ V+ +++ ++ + F+ E++ LRR F ++ Q+I +FD+T TG L + L+ + +++ + L ++N+ T G+ F S WKLTL+ LA VPVI A + + + S K + A A +A E+ G IRTV SF E + + + + + +Q+ +++ + GL FG F +YG L +G SM + + I+ ++ VG +++ + L KA A+ +F L+DRVS + G PE GD+E KD+ F+YPSRP+ + +G L + G KVALVG SGGGK+++ +L+ERFY+P +G I ++GV + +++ +L + +V QEP LF+ +I ENI YG ++ E+ AK ANAH FI+ P+ Y T +G++ +LSGGQKQR+AIARA++ NPKVLLLDEATSALD SE +VQ A+D++ +GRT +VIAHRLSTV AD + V+ G++ E GTHE LL E+G Y LV RQ+ Sbjct: 789 RILKLSRGDWPHFLIG----LVGATLNGAIMPVFSIIFSEILG--IFQEQDTDELTRRSRNMALWFILLAVVAALANFIQIYCFTFIGEKLTFNLRRLSFESIMRQDIGWFDLTENSTGRLTANLATEATLVQGMTSQRLGLLIQNIVTIVAGLVIAFVSGWKLTLVVLACVPVIGFAGKVEMDFFQGFSQKGKEAYAECGQVASEAIGGIRTVSSFTCENKILEKFRQCLQKPIQMSFRKSNVSGLSFGFSQCTLFFIYTLTYWYGGKLVDSGEWPAKESTLETYCYNGEYANIGYTDEATCIKSFTTTEGFSMMMRVFFAIIMSAMGVGQSMAFMPDL----GKAKLAAVAIFSLIDRVSEIDPFENKGQTLPEFK--GDIEFKDIKFSYPSRPNKAVFQGFNLVIPHGKKVALVGNSGGGKSSVISLLERFYNPSQGSITIDGVNIKDLNLNWLRGNMGLVGQEPFLFSGTIFENIIYG-KPDATMDEVVEAAKAANAHTFIESLPDAYHTQLGDKFTQLSGGQKQRVAIARAIIRNPKVLLLDEATSALDTVSEKVVQVALDNVSKGRTSIVIAHRLSTVIDADLIVVVKEGKVVELGTHETLLAENGFYAELVSRQM 1397
BLAST of g.arboreum_cottongen_reftransV1_0010184 vs. ExPASy Swiss-Prot
Match: ABCB3_DICDI (ABC transporter B family member 3 OS=Dictyostelium discoideum GN=abcB3 PE=3 SV=1) HSP 1 Score: 357.066 bits (915), Expect = 1.976e-105 Identity = 223/636 (35.06%), Postives = 360/636 (56.60%), Query Frame = -3 Query: 71 AEEAVN--VGFWRVFALA-KPDAGKIFVATFALLIASTTNLLIPKYGGMIIDIVSRDIRTPEQQSEALEAVKNTVTYIVLIVVIGSVSTALRSWLFSSASERVVARLRRDLFSHLIHQEIAFFDVTRTGELLSRLSEDTQIIKNAATTNLSEALRNLTTASIGVAFMFSSSWKLTLLSLAIVPVISVAIRRLGRYLKELSHKTQXXXXXXXXXXXXSFGAIRTVRSFAQEGFAISNYTEKVDETLQLGLKQAKLVGLFFGGVNAAFTFSVMAVVFYGAYL---TITGSM-----TVGSLTSFILYSLTVG-SAVSSLSGLYSTAMKAAGASRRVFQLLDRVS-SMPKSGDKCPEGNPDGDVELKDVWFAYPSRPSDMILKGITLKLKPGSKVALVGPSGGGKTTIANLIERFYDPLKGEILLNGVPLVEISHEYLHKKVSIVSQEPILFNCSIEENIAYGFXXXXXXXXXXSVAKMANAHEFIDKFPEKYKTVVGERGLRLSGGQKQRIAIARALLMNPKVLLLDEATSALDAESEYLVQDAMDSLMRGRTVLVIAHRLSTVQSADTVAVISNGEIAESGTHEDLLREDGIYTALVRRQLQGPTTKI*FQNG----KQGPYTCSAHHILYTWHCQK 1927 AE +N V F +F A D +F+ T A +I + G+++D + + + V++ Y++++ V + L + L+ A ER +R+RR+ + QEI +FD + EL SR++ DT + + A + + +T G F+ W+LTL+ ++ P++++ + + +++ Q A + A +AEE+ G+IRTV +F+ E AI Y+ + + +G K++ GL G V + +YG+ L +T S+ T G + S + +++ +G +++ S + + GA+ ++FQ++DR S + P S G++E KDV F YPSRP I G LK+KPG V LVG SGGGK+TI +L+ERFYDP +GEILL+G + + + L +K+ +V+QEP+LF +I ENI YG ++ EIE AK+ANAH FI + P+ Y T+VGE+G+++SGGQ+QRIAIARA++ NP +LLLDE+TSALDAES LVQ+A+D LM+GRT +VIAH LST+++AD + I G E GTH++L+ + G+Y LV +Q + +NG + ++ + +L ++H K Sbjct: 155 AENELNQSVPFLSLFRFADNTDKVLMFLGTIAAVINGAAMPTVSLVFGLVVDAFKPTQFNDDPNYDIYDTVRSISFYLLMLGGGVFVLSYLETTLWMIAGERQTSRIRREYLESTLRQEIGWFDTNKANELSSRINSDTVLFEEAIGEKVGRFIHFFSTFVAGFVIGFTKGWQLTLVITSVSPLLAIGGFFTAKMMTQMTKLGQEAYSRAGGVAEENIGSIRTVATFSGEKLAIDKYSNNLKDARTVGYKRSFFNGLGLGFVQFVILGTYALAFWYGSTLISNKVTNSVSDRPWTGGDVVS-VFFAVIIGATSIGQASPCLALFAQGRGAAYKIFQVIDRQSKANPFSTRGIKPETLSGEIEFKDVGFHYPSRPDVPIFNGFNLKIKPGQTVGLVGDSGGGKSTIISLLERFYDPCQGEILLDGEDIRKFNVRGLRQKIGLVNQEPVLFATTISENIRYG-KEGATQDEIEEAAKLANAHSFISQLPQGYNTLVGEKGVQMSGGQRQRIAIARAVIKNPNILLLDESTSALDAESTKLVQEALDVLMKGRTTIVIAHNLSTIRNADVIIYIKKGVAVERGTHDELMAKQGLYFDLVEKQSHQQMYNL-LENGTRSRRSSTFSAEVNPLLDSFHVSK 787 HSP 2 Score: 290.426 bits (742), Expect = 3.107e-82 Identity = 207/617 (33.55%), Postives = 331/617 (53.65%), Query Frame = -3 Query: 164 RVFALAKPDAGKIFVATFALLIASTTNLLIPKYGGMIIDIVSRDIRTPEQQSEALEAVKNTVTYIVLIVVIGS-VSTALRSWLFSSASERVVARLRRDLFSHLIHQEIAFFDV--TRTGELLSRLSEDTQIIKNAATTNLSEALRNLTTASIGVAFMFSSSWKLTLLSLAIVPVISVAIRRLGRYLKELSHKTQXXXXXXXXXXXXSFGAIRTVRSFAQEGFAISNYTEKVDETLQLGLKQAKLVGLFFGGVNAAFTFSVMAVVF-YGAYLT-----------ITGSMTVGSLTSFILYSLTVGSAVSSLSGL-------YSTAMKAAGASR----------------RVFQLLDRVSSM-PKSGDKCPEGNPDGDVELKDVWFAYPSRPSDMILKGITLKLKPGSKVALVGPSGGGKTTIANLIERFYDPLKGEILLNGVPLVEISHEYLHKKVSIVSQEPILFNCSIEENIAYGFXXXXXXXXXXSVAKMANAHEFIDKFPEKYKTVVGERGLRLSGGQKQRIAIARALLMNPKVLLLDEATSALDAESEYLVQDAMDSLMRGRTVLVIAHRLSTVQSADTVAVISNGEIAESGTHEDLLREDGIYTALVRRQLQ 1897 RV +P+ G + F L A T + P + + ++++ + P+ L N V + + + +G+ +S + +LFS E++ RLRRD F+ ++ Q++ +FD+ TG+L S L+ D +++ + L L+N+ T G+ F S W+LTL+ +A P++ + + + L S K A +A E+ IRTV SF E + Y ++ G+K+A + G FG F V + F YG L I+ + T ++ T A +++ G ++ M A G + VF+LLD S + P + D GD+E K++ F+YP+RP + + +G TL L+ G+ ALVG SGGGK+T +L++RFY+P+ GEI ++G + ++ +L +V QEP LF+ +I +NI YG ++ EIE +K++N+H FI P Y T +GE+ +LSGGQKQRIAIARA++ NPK+LLLDE+TSALDA+S LVQ+A++++M+GRT +VIAH L T+Q+AD +A + G+I E GTH++LL +G Y+ L Q Q Sbjct: 825 RVVKYNRPELG---LWCFGFLSAVGTGAVYPGFAMVFTEMLTI-FQNPD--PNYLTDHANFVALMFVALAVGAGISNFFQGFLFSVIGEKLTYRLRRDCFAAIMRQDVGWFDLPENSTGKLTSHLATDAALVQGMTSQRLGIVLQNILTMVGGLVIAFYSGWQLTLVIIACFPLVVITSKVQMQILAGFSSKD--GCGPAGQVASEAISGIRTVASFTTEKQVVELYKKQQKGPSSEGIKKAHISGFAFG-FTQLILFCVYCLSFWYGGKLVGSGVFGATDKEISDNCTPQTIPYLWKDYDTCERAQNTIYGFNSMTRVFFAIVMSAIGVGQASSFAPDLAKAKAAAVSVFKLLDTPSKIDPTTEDGDRIDIVGGDIEFKNLHFSYPTRPDNSVFRGFTLTLQSGTTTALVGDSGGGKSTCLSLLQRFYNPVVGEIFIDGHNIKNLNVRHLRHLFGLVGQEPTLFSGTIADNIRYG-KHDATQEEIEEASKLSNSHSFIIDLPNGYNTELGEKYTQLSGGQKQRIAIARAIIRNPKILLLDESTSALDADSTKLVQEALENVMKGRTTIVIAHNLLTIQNADCIAYVRAGQIIERGTHDELLEAEGPYSQLWYNQQQ 1431
BLAST of g.arboreum_cottongen_reftransV1_0010184 vs. ExPASy Swiss-Prot
Match: TAGA_DICDI (Serine protease/ABC transporter B family protein tagA OS=Dictyostelium discoideum GN=tagA PE=1 SV=2) HSP 1 Score: 358.221 bits (918), Expect = 3.026e-105 Identity = 222/619 (35.86%), Postives = 352/619 (56.87%), Query Frame = -3 Query: 122 QQAAESPLSDLEQGN--AEEAVNVGFWRVFALAKPDAGKIFVATFALLIASTTNLLIPKYGGMIIDIVSRDIRTPEQQSEALEAVKNTVTYIVLIVVIGSVSTALRSWLFSSASERVVARLRRDLFSHLIHQEIAFFDVTRTGELLSRLSEDTQIIKNAATTNLSEALRNLTTASIGVAFMFSSSWKLTLLSLAIVPVISVAIRRLGRYLKELSHKTQXXXXXXXXXXXXSFGAIRTVRSFAQEGFAISNYTEKVDETLQLGLKQAKLVGLFFGGVNAAFTFSVMAVVFYGAYLTITGSMTVGSLTSFILYSLTVGSAVSSLSGLYSTAMKAAGASRRVFQLLDRVSSMPKSGDKCPEGNPDGDVELKDVWFAYPSRPSDMILKGITLKLKPGSKVALVGPSGGGKTTIANLIERFYDPLKGEILLNGVPLVEISHEYLHKKVSIVSQEPILFNCSIEENIAYGFXXXXXXXXXXSVAKMANAHEFIDKFPEKYKTVVGERGLRLSGGQKQRIAIARALLMNPKVLLLDEATSALDAESEYLVQDAMDSLMRGRTVLVIAHRLSTVQSADTVAVISNGEIAESGTHEDLLREDGIYTALVRRQLQGPTTKI*FQNGKQG 1972 QQ SP D E G + + V + + V +L KP++ + +A F I L +P I D + + + T+ LI++ + L L + A R++ARLRR++F+ L+ Q++AFF+ +TGEL+SRL+ D +++ + ++ + + T + +F SWKL+L+ L +P++ V + G Y++ +S K Q A A A++ A E+ ++TVR F+ E ++ +++ + + ++ LK G++ SV +++YG+ L G +T L +F L+ + AV+ ++ LY+T G+S R F+++ RV + G GD++ V FAY S P ++L+ I +K +PG+ AL+GPSGGGK+T+ +LI R Y+ G I L+G + + + LH+ +SIV+QEP LF+ SI ENI +G ++ SEI K ANAH+FI PE Y T++GERG LSGGQKQRIAIAR ++ NP VLLLDE TS LD ESE LVQD++D L+ GRTV+++AHRL+T+ +AD +AV+S+ I+E GT E+LL + G++ V+ Q GKQG Sbjct: 1021 QQQNNSPQYD-EDGRLISGQEVEISIFEVISLGKPESKILGLALFLSFIDVALGLAVPLVAANIFDYL---------YAGETGKISTTILTFALIIIGMIIVQFLSGILLALAGHRIIARLRREMFASLLKQDMAFFNERKTGELMSRLASDVSSVRSIISDSIPHMIIQIATIGGTLIMLFIISWKLSLVVLCPLPILLVFSKFYGGYIEVISVKVQDALADAATHAAETLFNMKTVRWFSAEEREVAKFSKLISVSYKIALKMTIWNGIYSSTSGIFEQLSVFILLWYGSSLVSNGDLTPSMLIAFNLFLPFITGAVTQVASLYTTYKSYKGSSYRFFEIMQRVPDIQGEG-GITRTKVRGDIQFNKVSFAYSSNPDQLVLEKIDIKFEPGTITALIGPSGGGKSTMLSLIGRLYNIDGGSITLDGTNIKDFNVPNLHEHISIVNQEPSLFSGSIAENIMFG-KPTATRSEIIEACKQANAHDFITAMPEGYDTLIGERGTALSGGQKQRIAIARTIIKNPTVLLLDETTSELDVESEKLVQDSIDKLVVGRTVIIVAHRLTTILTADIIAVVSDSTISEMGTPEELLAKKGMFYDFVQ-----------IQYGKQG 1616
BLAST of g.arboreum_cottongen_reftransV1_0010184 vs. ExPASy Swiss-Prot
Match: AB12B_ARATH (ABC transporter B family member 12 OS=Arabidopsis thaliana GN=ABCB12 PE=2 SV=2) HSP 1 Score: 354.369 bits (908), Expect = 4.526e-105 Identity = 213/591 (36.04%), Postives = 355/591 (60.07%), Query Frame = -3 Query: 167 VGFWRVFALAKPDAGKIFVATFALLIASTTNLLIPKYGGMIIDIVSRDIRTPEQQSEALEAVKNTVTYIVLIVVIGSVSTAL---RSWLFSSASERVVARLRRDLFSHLIHQEIAFFDV--TRTGELLSRLSEDTQIIKNAATTNLSEALRNLTTASIGVAFMFSSSWKLTLLSLAIVPVISVAIRRLGRYLKELSHKTQXXXXXXXXXXXXSFGAIRTVRSFAQEGFAISNYTEKVDETLQLGLKQAKLVGLFFGGVNAAFTFSVMAVVFYGAYLTITGSMTVGSLTSFILYSLTVGS-AVSSLSGLYSTAMKAAGASRRVFQLLDRVSSMPKSGDKCPE-GNPDGDVELKDVWFAYPSRPSDMILKGITLKLKPGSKVALVGPSGGGKTTIANLIERFYDPLKGEILLNGVPLVEISHEYLHKKVSIVSQEPILFNCSIEENIAYGFXXXXXXXXXXSVA--KMANAHEFIDKFPEKYKTVVGERGLRLSGGQKQRIAIARALLMNPKVLLLDEATSALDAESEYLVQDAMDSLMRGRTVLVIAHRLSTVQSADTVAVISNGEIAESGTHEDLLRED-GIYTALVRRQL 1909 V R+ AL KP+ + + T ++A+ + P +G +I ++ + +Q K++ + ++ V +G S + + +LF+ A +++ R++ F +H E+++FD +G + +RLS D +I+ LS A++N +A+ G+ F++SW+L L+ L ++P+I + +++K S ++ AS +A ++ G+IRTV SF E + Y ++ + ++ G+KQ + GL FG + F V A FY A + T + ++LT+ + +S S + KA A+ +F ++DR S + S + N GD+EL+ + F YP+RP I + + L ++ G VALVG SG GK+T+ +L++RFYDP G+I L+GV L ++ ++L +++ +V QEP+LFN +I NIAYG + +++E E +A ++ANAH+FI + Y TVVGE+G++LSGGQKQR+AIARA++ PK+LLLDEATSALDAESE LVQDA+D ++ RT +V+AHRLST+++AD +A++ NG IAE+GTHE L++ D G+Y +LV+ + Sbjct: 689 VSLTRIAALNKPEIPVLLLGT---VVAAINGAIFPLFGILISRVIEAFFKPADQLK------KDSRFWAIIFVALGVTSLIVSPSQMYLFAVAGGKLIRRIQSMCFEKAVHMEVSWFDEPENSSGTMGARLSTDAALIRALVGDALSLAVQNAASAASGLIIAFTASWELALIILVMLPLIGINGFLQVKFMKGFSADAKSKYEEASQVANDAVGSIRTVASFCAEEKVMQMYNKQCEGPIKDGVKQGFISGLGFG-FSFFILFCVYATSFYAAARLVEDGKTTFIDVFQVFFALTMAAIGISQSSTFAPDSSKAKVAAASIFAIIDRKSKIDSSDETGTVLENVKGDIELRHLSFTYPARPGIQIFRDLCLTIRAGKTVALVGESGSGKSTVISLLQRFYDPDSGQITLDGVELKKLQLKWLRQQMGLVGQEPVLFNDTIRANIAYGKGSEEAATESEIIAAAELANAHKFISSIQQGYDTVVGEKGIQLSGGQKQRVAIARAIVKEPKILLLDEATSALDAESERLVQDALDRVIVNRTTVVVAHRLSTIKNADVIAIVKNGVIAENGTHETLIKIDGGVYASLVQLHM 1269 HSP 2 Score: 332.798 bits (852), Expect = 2.604e-97 Identity = 215/593 (36.26%), Postives = 349/593 (58.85%), Query Frame = -3 Query: 170 EEAVNVGFWRVFALAKPDAGKIFVATFALLIASTTNLLIPKYGGMIIDIVSRDIRTPEQQSEALEAVKNTVTYIVLIVVIGSVSTA---LRSWLFSSASERVVARLRRDLFSHLIHQEIAFFDV-TRTGELLSRLSEDTQIIKNAATTNLSEALRNLTTASIGVAFMFSSSWKLTLLSLAIVPVISVAIRRLGRYLKELSHKTQXXXXXXXXXXXXSFGAIRTVRSFAQEGFAISNYTEKVDETLQLGLKQAKLVGLFFGGVNAAFTFSVMAVVFYGAYLTITGSMTVGSLTSFILYSLTVGSAVSSLSGLYSTAMKAAGASRRVFQLLDR---VSSMPKSGDKCPEGNPDGDVELKDVWFAYPSRPSDMILKGITLKLKPGSKVALVGPSGGGKTTIANLIERFYDPLKGEILLNGVPLVEISHEYLHKKVSIVSQEPILFNCSIEENIAYGFXXXXXXXXXXSVAKMANAHEFIDKFPEKYKTVVGERGLRLSGGQKQRIAIARALLMNPKVLLLDEATSALDAESEYLVQDAMDSLMRGRTVLVIAHRLSTVQSADTVAVISNGEIAESGTHEDLLRED-GIYTALVRRQ 1924 E+A V +++FA A D+ +F+ L A + +P + D++ D Q ++ + V + V + + +G + A + W+ + ER A++R + ++ Q+I FFDV T TGE++ R+S DT I++A + + ++ ++T G A F+ W LTL+ L +P +++A + + S + QAA A A+++ E++ G+IRTV SF E AI++Y + + + ++Q GL G + F S +++G + + T GS+ + I+ + ++ S + A+ ++F+ + R + + +G G+ GD+ELKDV F+YP+RP + I G +L + G+ ALVG SG GK+T+ NLIERFYDP GE+L++G+ L E +++ K+ +V QEP+LF+ SI ENIAYG ++ EI+ ++ANA +FI+ P+ T VGE G +LSGGQKQRIAIARA+L +P+VLLLDEATSALD ESE +VQ+A+D +M RT +V+AHRLSTV++AD +AVI +G++ E G+H +LL++ G Y+ L+R Q Sbjct: 23 EKAKTVPLYKLFAFA--DSFDVFLMICGSLGAIGNGVCLPLMTLLFGDLI--DSFGKNQNNKDIVDVVSKVCLKFVYLGLGRLGAAFLQVACWMITG--ERQAAKIRSNYLKTILRQDIGFFDVETNTGEVVGRMSGDTVHIQDAMGEKVGKFIQLVSTFVGGFALAFAKGWLLTLVMLTSIPFLAMAGAAMALLVTRASSRGQAAYAKAATVVEQTIGSIRTVASFTGEKQAINSYKKYITSAYKSSIQQGFSTGLGLGVMIYVFFSSYALAIWFGGKMILEKGYTGGSVINVIIIVVAGSMSLGQTSPCVTAFAAGQAAAYKMFETIKRKPLIDAYDVNGKVL--GDIRGDIELKDVHFSYPARPDEEIFDGFSLFIPSGATAALVGESGSGKSTVINLIERFYDPKAGEVLIDGINLKEFQLKWIRSKIGLVCQEPVLFSSSIMENIAYG-KENATLQEIKVATELANAAKFINNLPQGLDTKVGEHGTQLSGGQKQRIAIARAILKDPRVLLLDEATSALDTESERVVQEALDRVMVNRTTVVVAHRLSTVRNADMIAVIHSGKMVEKGSHSELLKDSVGAYSQLIRCQ 606 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0010184 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0010184 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0010184 ID=g.arboreum_cottongen_reftransV1_0010184; Name=g.arboreum_cottongen_reftransV1_0010184; organism=Gossypium arboreum; type=contig; length=2148bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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