g.arboreum_cottongen_reftransV1_0010184, g.arboreum_cottongen_reftransV1_0010184 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0010184 vs. ExPASy TrEMBL
Match: A0A0D3BZR8_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea GN=ALS1 PE=3 SV=1) HSP 1 Score: 954.896 bits (2467), Expect = 0.000e+0 Identity = 493/624 (79.01%), Postives = 567/624 (90.87%), Query Frame = -3 Query: 152 ERAPLL-NKEANKQTNGQQAAESPLSDLEQGNAEEAVNVGFWRVFALAKPDAGKIFVATFALLIASTTNLLIPKYGGMIIDIVSRDIRTPEQQSEALEAVKNTVTYIVLIVVIGSVSTALRSWLFSSASERVVARLRRDLFSHLIHQEIAFFDVTRTGELLSRLSEDTQIIKNAATTNLSEALRNLTTASIGVAFMFSSSWKLTLLSLAIVPVISVAIRRLGRYLKELSHKTQXXXXXXXXXXXXSFGAIRTVRSFAQEGFAISNYTEKVDETLQLGLKQAKLVGLFFGGVNAAFTFSVMAVVFYGAYLTITGSMTVGSLTSFILYSLTVGSAVSSLSGLYSTAMKAAGASRRVFQLLDRVSSMPKSGDKCPEGNPDGDVELKDVWFAYPSRPSDMILKGITLKLKPGSKVALVGPSGGGKTTIANLIERFYDPLKGEILLNGVPLVEISHEYLHKKVSIVSQEPILFNCSIEENIAYGFXXXXXXXXXXSVAKMANAHEFIDKFPEKYKTVVGERGLRLSGGQKQRIAIARALLMNPKVLLLDEATSALDAESEYLVQDAMDSLMRGRTVLVIAHRLSTVQSADTVAVISNGEIAESGTHEDLLREDGIYTALVRRQLQGPTT 2020 R PLL N + + NG++ E+ +DLE G AE A NVGF RVF+LAKPDAGK+ + T ALLIASTTNLL+PK+GGMIIDIVSRD++TPEQQSE++ AV+N V I+LIVV+GS+ TALRSWLF+SASERVVARLR+DLF HL+HQEIAF+DVT+TGELLSRLSEDTQIIKNAATTNLSEALRN+TTA IGV FMFSSSWKLTLL+L +VP+IS+A+++ GRYL+ELSHKTQAAAAVA+SIAEESFGAIRTVRSFA+E + +S Y++KVDETL+LGLKQA LVGLFFGG+NAAFT SV+ VV YGAYLTITGSMTVG+LTSFILYSLTVGS+VSSLS LY+TAMKAAGASRRVFQ+LDRVSSMP SGDKCP GNPDGDVE+ DVWFAYPSRPS MILKGITL+L PGSKVALVGPSGGGKTTIANLIERFYDP+KG+ILLNGV L+EISH+YLHK++SIVSQEPILFNCS+EENIAYGF G+++ S+IE+ AKMANAHEFI+ FP+KYKTVVGERG+RLSGGQKQRIAIARALL NP+VLLLDEATSALDAESEYLVQDAMDSLM GRTVLVIAHRLSTV++AD VAVIS+G++AE GTHE+LL +GIYT LV+RQLQ ++ Sbjct: 16 HRDPLLQNNQDRTKENGEETIENGKTDLESGVAE-AANVGFGRVFSLAKPDAGKLVIGTIALLIASTTNLLVPKFGGMIIDIVSRDVKTPEQQSESILAVRNAVIVILLIVVVGSLCTALRSWLFNSASERVVARLRKDLFKHLMHQEIAFYDVTKTGELLSRLSEDTQIIKNAATTNLSEALRNVTTALIGVGFMFSSSWKLTLLALVVVPLISIAVKQFGRYLRELSHKTQAAAAVAASIAEESFGAIRTVRSFAKESYMVSQYSKKVDETLKLGLKQAVLVGLFFGGLNAAFTLSVITVVSYGAYLTITGSMTVGALTSFILYSLTVGSSVSSLSSLYTTAMKAAGASRRVFQILDRVSSMPNSGDKCPVGNPDGDVEINDVWFAYPSRPSHMILKGITLRLTPGSKVALVGPSGGGKTTIANLIERFYDPVKGKILLNGVSLMEISHQYLHKQISIVSQEPILFNCSVEENIAYGFDGEATLSDIENAAKMANAHEFIETFPDKYKTVVGERGVRLSGGQKQRIAIARALLTNPRVLLLDEATSALDAESEYLVQDAMDSLMAGRTVLVIAHRLSTVKTADCVAVISDGQVAEKGTHEELLSFNGIYTNLVKRQLQSSSS 638
BLAST of g.arboreum_cottongen_reftransV1_0010184 vs. ExPASy TrEMBL
Match: I1GN65_BRADI (Uncharacterized protein OS=Brachypodium distachyon GN=BRADI1G08280 PE=3 SV=1) HSP 1 Score: 948.347 bits (2450), Expect = 0.000e+0 Identity = 486/620 (78.39%), Postives = 550/620 (88.71%), Query Frame = -3 Query: 158 RAPLLNKEANKQTNGQQAAESPLSDLEQGNAEEAVNVGFWRVFALAKPDAGKIFVATFALLIASTTNLLIPKYGGMIIDIVSRDIRTPEQQSEALEAVKNTVTYIVLIVVIGSVSTALRSWLFSSASERVVARLRRDLFSHLIHQEIAFFDVTRTGELLSRLSEDTQIIKNAATTNLSEALRNLTTASIGVAFMFSSSWKLTLLSLAIVPVISVAIRRLGRYLKELSHKTQXXXXXXXXXXXXSFGAIRTVRSFAQEGFAISNYTEKVDETLQLGLKQAKLVGLFFGGVNAAFTFSVMAVVFYGAYLTITGSMTVGSLTSFILYSLTVGSAVSSLSGLYSTAMKAAGASRRVFQLLDRVSSMPKSGDKCPEGNPDGDVELKDVWFAYPSRPSDMILKGITLKLKPGSKVALVGPSGGGKTTIANLIERFYDPLKGEILLNGVPLVEISHEYLHKKVSIVSQEPILFNCSIEENIAYGFXXXXXXXXXXSVAKMANAHEFIDKFPEKYKTVVGERGLRLSGGQKQRIAIARALLMNPKVLLLDEATSALDAESEYLVQDAMDSLMRGRTVLVIAHRLSTVQSADTVAVISNGEIAESGTHEDLLREDGIYTALVRRQLQGP 2017 RAPLLN +G+ + LSDLE+GN +A NVGF RV LAK DAGK+ AT ALL+AS +NLL+PKYGG IIDIVSRD++ PE +++AL V T+ YIV+IV+ GSV TALR+WLF+SASERVVARLR+DLFSHLI+QEIAFFDVTRTGELLSRLSEDTQIIKNAATTNLSEALRN+TT +IG+ FMF++SWKLTLLSL IVPVISVA+RR GR+L+ELSH+TQAAAAVASSIAEESFGAIRTVR+FAQE IS Y EKV+ETL+LGLKQAK+VGLF GG+NAA T SV+ VV YGA LTI G MT GSLTSFILYSLTVGS+VS+LSGLY+T MKA+GASRRVFQLLDR+SSM SGDKCP+ DG+VEL DVWFAYPSRPS MILKGITLKL PGSKVALVGPSGGGKTTIANLIERFYDPLKG+ILLNGVPLVEISH+YLH+KVSIVSQEP+LFNCSIEENIAYG K+S++E+E+ AKMANAH+FI FPE+YKTVVGERG+RLSGGQKQR+AIARALLMNP+VLLLDEATSALDAESEYLVQDAMDSLM+GRTVLVIAHRLSTV+SADTVAVIS+G+I ESGTH++LL DGIYTALV+RQLQ P Sbjct: 15 RAPLLN-------HGETS--RALSDLEEGNNVQAANVGFCRVIKLAKHDAGKLIFATIALLVASLSNLLVPKYGGKIIDIVSRDVQQPEDKAQALADVNGTIFYIVIIVITGSVCTALRAWLFNSASERVVARLRQDLFSHLINQEIAFFDVTRTGELLSRLSEDTQIIKNAATTNLSEALRNVTTTAIGLGFMFTTSWKLTLLSLVIVPVISVAVRRFGRFLRELSHQTQAAAAVASSIAEESFGAIRTVRAFAQEPHEISRYGEKVNETLKLGLKQAKVVGLFSGGLNAASTLSVVIVVIYGANLTINGYMTTGSLTSFILYSLTVGSSVSALSGLYTTVMKASGASRRVFQLLDRISSMTNSGDKCPKNEIDGEVELDDVWFAYPSRPSHMILKGITLKLAPGSKVALVGPSGGGKTTIANLIERFYDPLKGKILLNGVPLVEISHQYLHRKVSIVSQEPVLFNCSIEENIAYGLESKASTAEVENAAKMANAHDFICGFPEQYKTVVGERGIRLSGGQKQRVAIARALLMNPRVLLLDEATSALDAESEYLVQDAMDSLMKGRTVLVIAHRLSTVKSADTVAVISDGQIVESGTHDELLDRDGIYTALVKRQLQLP 625
BLAST of g.arboreum_cottongen_reftransV1_0010184 vs. ExPASy TrEMBL
Match: F6H485_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0068g00210 PE=3 SV=1) HSP 1 Score: 948.347 bits (2450), Expect = 0.000e+0 Identity = 478/614 (77.85%), Postives = 554/614 (90.23%), Query Frame = -3 Query: 152 ANKQTNGQQAAESPLSDLEQGNAEEAVNVGFWRVFALAKPDAGKIFVATFALLIASTTNLLIPKYGGMIIDIVSRDIRTPEQQSEALEAVKNTVTYIVLIVVIGSVSTALRSWLFSSASERVVARLRRDLFSHLIHQEIAFFDVTRTGELLSRLSEDTQIIKNAATTNLSEALRNLTTASIGVAFMFSSSWKLTLLSLAIVPVISVAIRRLGRYLKELSHKTQXXXXXXXXXXXXSFGAIRTVRSFAQEGFAISNYTEKVDETLQLGLKQAKLVGLFFGGVNAAFTFSVMAVVFYGAYLTITGSMTVGSLTSFILYSLTVGSAVSSLSGLYSTAMKAAGASRRVFQLLDRVSSMPKSGDKCPEGNPDGDVELKDVWFAYPSRPSDMILKGITLKLKPGSKVALVGPSGGGKTTIANLIERFYDPLKGEILLNGVPLVEISHEYLHKKVSIVSQEPILFNCSIEENIAYGFXXXXXXXXXXSVAKMANAHEFIDKFPEKYKTVVGERGLRLSGGQKQRIAIARALLMNPKVLLLDEATSALDAESEYLVQDAMDSLMRGRTVLVIAHRLSTVQSADTVAVISNGEIAESGTHEDLLREDGIYTALVRRQLQGPTT 1993 A K+ N QAA PL+DLE+G+A++A VGF+RVF LAKP AGK+ +AT ALLI ST+ ++IPKY G+IIDIVSRDIRTPEQQSEAL AVKN V IV+IVV+GS+ +AL WLF+S SER+VARLR+DLFSHLI+QEIAFFDVT+TGELLSRLSED+QIIKN AT+NLS AL ++TTA+I ++FMFSSSWKLTLL+LA+VPVISVA R+ G +L+ELS+ TQAAAA ASS+A+ESFGAIRTVRSFAQEG+AIS+Y+EKVD TL+LGL+QAKLV LF+GG++AA T S++ V+ YGA LTI S+T GSLTSFILY TV S+VSSL+GLY+ MKAAGASRRVFQLLDRVS+MP SG++CP GNPDGDVEL D+WFAYPSRPS MILKGITLKL+PGSKVALVGPSGGGKTTIA LIERFYDPLKG+ILLNGVPLVEISH+YLHKK+SIVSQEP+LFNCS+EENIAYGF GK+SSSEIE AKMANAH+FI+ FPEKY+TVVGERGLRLSGGQKQRIAIARALLM+P+VLLLDEATSALDAESEYLVQDAM+SLMRGRTVLVIAHRLSTV+SADTVAVIS+G IAESG HE+LL ++GIYT LV+RQLQGP+T Sbjct: 625 AEKKPNDDQAANDPLTDLERGDADQAAKVGFFRVFFLAKPYAGKLIIATIALLIESTSRVMIPKYCGIIIDIVSRDIRTPEQQSEALVAVKNAVLDIVMIVVLGSLCSALEEWLFASVSERIVARLRKDLFSHLINQEIAFFDVTKTGELLSRLSEDSQIIKNVATSNLSSALTSITTAAITLSFMFSSSWKLTLLALAVVPVISVAARKFGYHLRELSNTTQAAAAEASSMAQESFGAIRTVRSFAQEGYAISSYSEKVDHTLKLGLRQAKLVALFYGGLDAASTLSLITVMVYGAILTIARSITTGSLTSFILYCFTVRSSVSSLAGLYTAGMKAAGASRRVFQLLDRVSTMPISGNECPLGNPDGDVELDDIWFAYPSRPSHMILKGITLKLRPGSKVALVGPSGGGKTTIAGLIERFYDPLKGKILLNGVPLVEISHKYLHKKISIVSQEPVLFNCSVEENIAYGFDGKASSSEIEHAAKMANAHDFIENFPEKYRTVVGERGLRLSGGQKQRIAIARALLMDPRVLLLDEATSALDAESEYLVQDAMESLMRGRTVLVIAHRLSTVKSADTVAVISDGRIAESGNHEELLSKNGIYTGLVKRQLQGPST 1238 HSP 2 Score: 890.567 bits (2300), Expect = 0.000e+0 Identity = 461/590 (78.14%), Postives = 531/590 (90.00%), Query Frame = -3 Query: 152 EAVNVGFWRVFALAKPDAGKIFVATFALLIASTTNLLIPKYGGMIIDIVSRDIRTPEQQSEALEAVKNTVTYIVLIVVIGSVSTALRSWLFSSASERVVARLRRDLFSHLIHQEIAFFDVTRTGELLSRLSEDTQIIKNAATTNLSEALRNLTTASIGVAFMFSSSWKLTLLSLAIVPVISVAIRRLGRYLKELSHKTQXXXXXXXXXXXXSFGAIRTVRSFAQEGFAISNYTEKVDETLQLGLKQAKLVGLFFGGVNAAFTFSVMAVVFYGAYLTITGSMTVGSLTSFILYSLTVGSAVSSLSGLYSTAMKAAGASRRVFQLLDRVSSMPKSGDKCPEGNPDGDVELKDVWFAYPSRPSDMILKGITLKLKPGSKVALVGPSGGGKTTIANLIERFYDPLKGEILLNGVPLVEISHEYLHKKVSIVSQEPILFNCSIEENIAYGFXXXXXXXXXXSVAKMANAHEFIDKFPEKYKTVVGERGLRLSGGQKQRIAIARALLMNPKVLLLDEATSALDAESEYLVQDAMDSLMRGRTVLVIAHRLSTVQSADTVAVISNGEIAESGTHEDLLREDGIYTALVRRQLQGPTT 1921 +A VGF+RVF+LAKP+AGK+ VAT ALL+AST+ +++PKYGGM+IDIVSRDIRTPEQQSEAL AVKN +VL+VV+GS+ A+R WLF+S SER+VA LR+DLFSHLI+Q+IAFFDVT TGELLSRLSED+QIIKN AT+NLS AL ++T IG+ FMFSSSWKLTLL LA+VPV+SVA GRYL+ELSHKTQAAAAVA S+AEESFGAI+TVRSFAQEG+AIS+Y+EKV ETL+L L+Q+KLV LF+GG+NA FT S++ VV YGA LTI SMT GSL SFILYSLTVG ++ SL GLY+TAMKAAGASRRVFQLLDRVS MP SG KCP GNPDGDVEL D+WFAYPSRPS MILKGI+LKL+PGSKVALVGPSGGGKTTIA+LIERFYDPLKG+ILLNGVPLVEISH+YLHKK+SIVSQEP+LFNCS+EENIAYGF GK+SSSEIE+ AKMANAH+FI FPEKY+TVVGERGLRLSGGQKQRIAIARALLM+P+VLLLDEATSALDAESEYLVQDAM+SLMRGRTVLVIAHRLSTV++AD VAVI +G IA+SG+HE+LL ++GIYT LV+RQLQGP+T Sbjct: 23 QAAKVGFFRVFSLAKPEAGKLIVATIALLVASTSIVMLPKYGGMVIDIVSRDIRTPEQQSEALTAVKNAALAVVLMVVLGSLCVAVREWLFASVSERIVAHLRKDLFSHLINQDIAFFDVTPTGELLSRLSEDSQIIKNVATSNLSSALTSITIVFIGLGFMFSSSWKLTLLVLALVPVVSVAAHVFGRYLRELSHKTQAAAAVACSMAEESFGAIQTVRSFAQEGYAISSYSEKVHETLKLALRQSKLVALFYGGINAVFTLSIVIVVVYGASLTIARSMTAGSLASFILYSLTVGISMLSLFGLYTTAMKAAGASRRVFQLLDRVSPMPISGHKCPLGNPDGDVELDDIWFAYPSRPSHMILKGISLKLRPGSKVALVGPSGGGKTTIASLIERFYDPLKGKILLNGVPLVEISHKYLHKKISIVSQEPVLFNCSVEENIAYGFDGKASSSEIENAAKMANAHDFIANFPEKYRTVVGERGLRLSGGQKQRIAIARALLMDPRVLLLDEATSALDAESEYLVQDAMESLMRGRTVLVIAHRLSTVKTADIVAVICDGRIAQSGSHEELLSKNGIYTGLVKRQLQGPST 612
BLAST of g.arboreum_cottongen_reftransV1_0010184 vs. ExPASy TrEMBL
Match: K4A6V9_SETIT (Uncharacterized protein OS=Setaria italica GN=Si034614m.g PE=3 SV=1) HSP 1 Score: 945.266 bits (2442), Expect = 0.000e+0 Identity = 485/620 (78.23%), Postives = 546/620 (88.06%), Query Frame = -3 Query: 158 RAPLLNKEANKQTNGQQAAESPLSDLEQGNAEEAVNVGFWRVFALAKPDAGKIFVATFALLIASTTNLLIPKYGGMIIDIVSRDIRTPEQQSEALEAVKNTVTYIVLIVVIGSVSTALRSWLFSSASERVVARLRRDLFSHLIHQEIAFFDVTRTGELLSRLSEDTQIIKNAATTNLSEALRNLTTASIGVAFMFSSSWKLTLLSLAIVPVISVAIRRLGRYLKELSHKTQXXXXXXXXXXXXSFGAIRTVRSFAQEGFAISNYTEKVDETLQLGLKQAKLVGLFFGGVNAAFTFSVMAVVFYGAYLTITGSMTVGSLTSFILYSLTVGSAVSSLSGLYSTAMKAAGASRRVFQLLDRVSSMPKSGDKCPEGNPDGDVELKDVWFAYPSRPSDMILKGITLKLKPGSKVALVGPSGGGKTTIANLIERFYDPLKGEILLNGVPLVEISHEYLHKKVSIVSQEPILFNCSIEENIAYGFXXXXXXXXXXSVAKMANAHEFIDKFPEKYKTVVGERGLRLSGGQKQRIAIARALLMNPKVLLLDEATSALDAESEYLVQDAMDSLMRGRTVLVIAHRLSTVQSADTVAVISNGEIAESGTHEDLLREDGIYTALVRRQLQGP 2017 R PLL NG+ + LSDLE+G+ + NVGF RV LA+ DAGK+ +AT ALL+AS +N+L+PKYGG IIDIVSRD+R PE +++ALE VK T+ YIVLIVV+GSV TALR+WLF+SASERVVARLR+DLFSHLI+QEIAFFDVTRTGELLSRLSEDTQIIKNAATTNLSEALRN+TT +IG+ FMFS+SWKLTLL+L IVPVISVA+R GR+L+ELSH+TQAAAAVASSIAEESFGAIRTVRSFAQE IS Y EKV+ETL+LGLKQAK+VGLF GG+NAA T SV+ VV YGA LTI G MT GSLTSFILYSLTVGS+VS+LSGLY+T MKA+GASRRVFQLLDRVSSMP SGD+CP DG+VEL DVWFAYPSRP+ MILKGITLKL PGSKVALVGPSGGGKTTIANLIERFYDPLKG ILLN VPLVEISH+YLH KVSIVSQEP LFNC+IEENIAYG GK++ +++ES AKMANAH FI FP++YKTVVGERG+RLSGGQKQRIAIARALLMNP+VLLLDEATSALDAESEYLVQDAMDSLM+GRTVLVIAHRLSTV+SADTVAVIS+G+I ESGTH++LL DGIYTALV+RQLQGP Sbjct: 15 RIPLLG-------NGETS--RALSDLEEGSNVQPANVGFCRVIKLARHDAGKLVLATIALLVASLSNILVPKYGGKIIDIVSRDVRRPEDKAQALEDVKGTILYIVLIVVVGSVCTALRAWLFNSASERVVARLRKDLFSHLINQEIAFFDVTRTGELLSRLSEDTQIIKNAATTNLSEALRNITTTAIGLGFMFSTSWKLTLLALVIVPVISVAVRSFGRFLRELSHQTQAAAAVASSIAEESFGAIRTVRSFAQESHEISRYGEKVEETLKLGLKQAKVVGLFSGGLNAASTLSVVIVVIYGANLTINGYMTTGSLTSFILYSLTVGSSVSALSGLYTTVMKASGASRRVFQLLDRVSSMPNSGDQCPTNEQDGEVELDDVWFAYPSRPNHMILKGITLKLAPGSKVALVGPSGGGKTTIANLIERFYDPLKGRILLNRVPLVEISHQYLHNKVSIVSQEPTLFNCTIEENIAYGLEGKTNFADVESAAKMANAHNFICSFPDQYKTVVGERGIRLSGGQKQRIAIARALLMNPRVLLLDEATSALDAESEYLVQDAMDSLMKGRTVLVIAHRLSTVKSADTVAVISDGQIVESGTHDELLARDGIYTALVKRQLQGP 625
BLAST of g.arboreum_cottongen_reftransV1_0010184 vs. ExPASy TrEMBL
Match: A0A0D2N6P7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G075900 PE=3 SV=1) HSP 1 Score: 944.495 bits (2440), Expect = 0.000e+0 Identity = 474/625 (75.84%), Postives = 555/625 (88.80%), Query Frame = -3 Query: 146 ERAPLLNKEANKQTNGQQAAESPLSDLEQGNAEEAVNVGFWRVFALAKPDAGKIFVATFALLIASTTNLLIPKYGGMIIDIVSRDIRTPEQQSEALEAVKNTVTYIVLIVVIGSVSTALRSWLFSSASERVVARLRRDLFSHLIHQEIAFFDVTRTGELLSRLSEDTQIIKNAATTNLSEALRNLTTASIGVAFMFSSSWKLTLLSLAIVPVISVAIRRLGRYLKELSHKTQXXXXXXXXXXXXSFGAIRTVRSFAQEGFAISNYTEKVDETLQLGLKQAKLVGLFFGGVNAAFTFSVMAVVFYGAYLTITGSMTVGSLTSFILYSLTVGSAVSSLSGLYSTAMKAAGASRRVFQLLDRVSSMPKSGDKCPEGNPDGDVELKDVWFAYPSRPSDMILKGITLKLKPGSKVALVGPSGGGKTTIANLIERFYDPLKGEILLNGVPLVEISHEYLHKKVSIVSQEPILFNCSIEENIAYGFXXXXXXXXXXSVAKMANAHEFIDKFPEKYKTVVGERGLRLSGGQKQRIAIARALLMNPKVLLLDEATSALDAESEYLVQDAMDSLMRGRTVLVIAHRLSTVQSADTVAVISNGEIAESGTHEDLLREDGIYTALVRRQLQGPTTKI 2020 ERAPLL++ ++ NG + L+DLE G+A A NV F RV +LAKPDAGK+ VAT ALLIAST+++LIPK+GG IIDIVS DI PEQ+ EAL A++NT+ I LIV++GSV TALR+WLFSSASERVVARLR++LFSHLI+QEIAFFD+TRTGELLSRLSEDTQIIKNAATTNLSEALRNL+T IG+ FMF++SWKLTLL+L +VP IS+A+R+ GR+L+ELSHKTQ AAA A+S+AEESFGAIRTVRSFAQE + IS Y++KVDETL LGLKQAK+VGLFFGG+NAA T SV+ VV YGA LTITG MT G+LTSFILYSLTVGS+VS LSGLY+ AMKAAGASRRVFQLLDRVSSMPKSG+KCP G+ D +V+L DVWFAY SRP+ M+LKGITLKL+PGSKVALVGPSGGGK+TIANLIERFYDP+KG+ILLNGVPL+EISHE+LH+K+SIVSQEP+LFNCSIE+NIAYG G+ + ++IE+ AKMANAHEFI KFP+KY+T VGERG+RLSGGQKQR+AIARALLM+PK+LLLDEATSALDAESEYLVQDAMDSLM+GRTVLVIAHRLSTVQSADTVAV+S+G+I ESG HE+LL +DG+YTALVRRQLQ T + Sbjct: 7 ERAPLLDRGGRRKANGN--TDDNLTDLEHGDAIPAANVSFTRVLSLAKPDAGKLIVATIALLIASTSSILIPKFGGRIIDIVSGDIGMPEQKVEALAAIRNTILDIFLIVIVGSVCTALRAWLFSSASERVVARLRKNLFSHLINQEIAFFDITRTGELLSRLSEDTQIIKNAATTNLSEALRNLSTTFIGLGFMFATSWKLTLLALVVVPAISIAVRQFGRFLRELSHKTQVAAAAAASVAEESFGAIRTVRSFAQEEYEISRYSQKVDETLNLGLKQAKVVGLFFGGLNAASTLSVIVVVIYGANLTITGLMTPGALTSFILYSLTVGSSVSGLSGLYTVAMKAAGASRRVFQLLDRVSSMPKSGNKCPLGDQD-EVQLDDVWFAYSSRPNHMVLKGITLKLQPGSKVALVGPSGGGKSTIANLIERFYDPIKGKILLNGVPLLEISHEHLHRKISIVSQEPVLFNCSIEKNIAYGCEGRVNITDIENAAKMANAHEFISKFPDKYQTHVGERGVRLSGGQKQRVAIARALLMDPKILLLDEATSALDAESEYLVQDAMDSLMKGRTVLVIAHRLSTVQSADTVAVVSDGQIVESGNHEELLSKDGVYTALVRRQLQATKTNL 628
BLAST of g.arboreum_cottongen_reftransV1_0010184 vs. ExPASy Swiss-Prot
Match: AB25B_ORYSJ (ABC transporter B family member 25 OS=Oryza sativa subsp. japonica GN=OsABCB25 PE=2 SV=1) HSP 1 Score: 939.102 bits (2426), Expect = 0.000e+0 Identity = 478/620 (77.10%), Postives = 544/620 (87.74%), Query Frame = -3 Query: 158 RAPLLNKEANKQTNGQQAAESPLSDLEQGNAEEAVNVGFWRVFALAKPDAGKIFVATFALLIASTTNLLIPKYGGMIIDIVSRDIRTPEQQSEALEAVKNTVTYIVLIVVIGSVSTALRSWLFSSASERVVARLRRDLFSHLIHQEIAFFDVTRTGELLSRLSEDTQIIKNAATTNLSEALRNLTTASIGVAFMFSSSWKLTLLSLAIVPVISVAIRRLGRYLKELSHKTQXXXXXXXXXXXXSFGAIRTVRSFAQEGFAISNYTEKVDETLQLGLKQAKLVGLFFGGVNAAFTFSVMAVVFYGAYLTITGSMTVGSLTSFILYSLTVGSAVSSLSGLYSTAMKAAGASRRVFQLLDRVSSMPKSGDKCPEGNPDGDVELKDVWFAYPSRPSDMILKGITLKLKPGSKVALVGPSGGGKTTIANLIERFYDPLKGEILLNGVPLVEISHEYLHKKVSIVSQEPILFNCSIEENIAYGFXXXXXXXXXXSVAKMANAHEFIDKFPEKYKTVVGERGLRLSGGQKQRIAIARALLMNPKVLLLDEATSALDAESEYLVQDAMDSLMRGRTVLVIAHRLSTVQSADTVAVISNGEIAESGTHEDLLREDGIYTALVRRQLQGP 2017 RAPLL Q LSDLE+G+ + NVGF RV LA+ DAGK+ +AT ALL+AS +N+L+PKYGG IIDIVSRD+R PE +++AL+ V T+ YIV+IVV GSV TALR+WLF+SASERVVARLR+DLFSHL++QEIAFFDVTRTGELLSRLSEDTQIIKNAATTNLSEALRN+TT SIG+ FMF++SWKLTLL+L IVPVIS+A+R+ GR+L+ELSH+TQAAAAVASSIAEESFGAIRTVRSFAQE + Y EKVDETL+LGLKQAK+VG+F GG+NAA T SV+ VV YGA LTI G MT GSLTSFILYSLTVGS+VS+LSGLY+T MKA+GASRRVFQLLDRVSSM SGD+CP DG+VEL DVWFAYPSRPS MILKGITLKL PGSKVALVGPSGGGKTTIANLIERFYDPLKG ILLNGVPL EISH++LH+KVSIVSQEP+LFNCSIEENIAYG GK+SS+++E+ AKMANAH FI FP++YKTVVGERG+RLSGGQKQR+AIARALLMNP+VLLLDEATSALDAESEYLVQDAMDSLM+GRTVLVIAHRLSTV+SADTVAVIS+G+I ESGTH++LL DGIYTALV+RQLQGP Sbjct: 12 RAPLL---------AQGETSRALSDLEEGSNVQPENVGFCRVIKLARHDAGKLVIATMALLVASLSNILVPKYGGKIIDIVSRDVRRPEDKAQALDDVTGTILYIVIIVVTGSVCTALRAWLFNSASERVVARLRKDLFSHLVNQEIAFFDVTRTGELLSRLSEDTQIIKNAATTNLSEALRNITTTSIGLGFMFATSWKLTLLALVIVPVISIAVRKFGRFLRELSHQTQAAAAVASSIAEESFGAIRTVRSFAQESHEVLRYGEKVDETLKLGLKQAKVVGMFSGGLNAASTLSVVIVVIYGANLTINGYMTTGSLTSFILYSLTVGSSVSALSGLYTTVMKASGASRRVFQLLDRVSSMANSGDRCPTNENDGEVELDDVWFAYPSRPSHMILKGITLKLTPGSKVALVGPSGGGKTTIANLIERFYDPLKGRILLNGVPLPEISHQFLHRKVSIVSQEPVLFNCSIEENIAYGLEGKASSADVENAAKMANAHNFICSFPDQYKTVVGERGIRLSGGQKQRVAIARALLMNPRVLLLDEATSALDAESEYLVQDAMDSLMKGRTVLVIAHRLSTVKSADTVAVISDGQIVESGTHDELLSRDGIYTALVKRQLQGP 622
BLAST of g.arboreum_cottongen_reftransV1_0010184 vs. ExPASy Swiss-Prot
Match: AB27B_ARATH (ABC transporter B family member 27 OS=Arabidopsis thaliana GN=ABCB27 PE=1 SV=1) HSP 1 Score: 923.309 bits (2385), Expect = 0.000e+0 Identity = 492/623 (78.97%), Postives = 561/623 (90.05%), Query Frame = -3 Query: 152 RAPLL-NKEANKQTNGQQAAESPLSDLEQGNAEEAVNVGFWRVFALAKPDAGKIFVATFALLIASTTNLLIPKYGGMIIDIVSRDIRTPEQQSEALEAVKNTVTYIVLIVVIGSVSTALRSWLFSSASERVVARLRRDLFSHLIHQEIAFFDVTRTGELLSRLSEDTQIIKNAATTNLSEALRNLTTASIGVAFMFSSSWKLTLLSLAIVPVISVAIRRLGRYLKELSHKTQXXXXXXXXXXXXSFGAIRTVRSFAQEGFAISNYTEKVDETLQLGLKQAKLVGLFFGGVNAAFTFSVMAVVFYGAYLTITGSMTVGSLTSFILYSLTVGSAVSSLSGLYSTAMKAAGASRRVFQLLDRVSSMPKSGDKCPEGNPDGDVELKDVWFAYPSRPSDMILKGITLKLKPGSKVALVGPSGGGKTTIANLIERFYDPLKGEILLNGVPLVEISHEYLHKKVSIVSQEPILFNCSIEENIAYGFXXXXXXXXXXSVAKMANAHEFIDKFPEKYKTVVGERGLRLSGGQKQRIAIARALLMNPKVLLLDEATSALDAESEYLVQDAMDSLMRGRTVLVIAHRLSTVQSADTVAVISNGEIAESGTHEDLLREDGIYTALVRRQLQGPTT 2017 R PLL N+E + NG +E+ L+DLE G EA NVGF RVFALAKPDAGK+ + T ALLI STTNLL+PK+GGMIIDIVSRD++TPEQQ+E+L AV+N V I+LIVVIGS+ TALR+WLF+SASERVVARLR+DLF HL+HQEIAF+DVT+TGELLSRLSEDTQIIKNAATTNLSEALRN+TTA IGV FMF+SSWKLTLL+L +VPVISVA+++ GRYL+ELSH TQAAAAVA+SIAEESFGA+RTVRSFA+E + +S Y++KVDETL+LGLKQA LVGLFFGG+NAAFT SV+ VV YGAYLTI GSMTVG+LTSFILYSLTVGS+VSSLS LY+TAMKAAGASRRVFQ+LDRVSSM SGDKCP GNPDGDVEL DVWFAYPSRPS MILKGI+L+L PGSKVALVGPSGGGKTTIANLIERFYDPLKG+ILLNGV L+EISH+YLHK++SIVSQEPILFNCS+EENIAYGF G++S ++IE+ AKMANAHEFI+ FP+KY TVVGERGLRLSGGQKQRIAIARALL NP VLLLDEATSALDAESEYLVQDAMDSLM GRTVLVIAHRLSTV++AD VAVIS+GE+AE GTH++LL +GIYT LV+RQLQ ++ Sbjct: 22 RDPLLQNQEDKPKANG---SENGLNDLEHG-VVEAANVGFGRVFALAKPDAGKLVIGTIALLIGSTTNLLVPKFGGMIIDIVSRDVKTPEQQTESLIAVRNAVVIILLIVVIGSICTALRAWLFNSASERVVARLRKDLFRHLMHQEIAFYDVTKTGELLSRLSEDTQIIKNAATTNLSEALRNVTTALIGVGFMFTSSWKLTLLALVVVPVISVAVKQFGRYLRELSHTTQAAAAVAASIAEESFGAVRTVRSFAKESYMVSQYSKKVDETLKLGLKQAVLVGLFFGGLNAAFTLSVITVVSYGAYLTIYGSMTVGALTSFILYSLTVGSSVSSLSSLYTTAMKAAGASRRVFQILDRVSSMSSSGDKCPVGNPDGDVELNDVWFAYPSRPSHMILKGISLRLTPGSKVALVGPSGGGKTTIANLIERFYDPLKGKILLNGVSLMEISHQYLHKQISIVSQEPILFNCSVEENIAYGFDGEASFTDIENAAKMANAHEFIEAFPDKYNTVVGERGLRLSGGQKQRIAIARALLTNPSVLLLDEATSALDAESEYLVQDAMDSLMAGRTVLVIAHRLSTVKTADCVAVISDGEVAEKGTHDELLSLNGIYTNLVKRQLQSSSS 640
BLAST of g.arboreum_cottongen_reftransV1_0010184 vs. ExPASy Swiss-Prot
Match: ABCB1_DICDI (ABC transporter B family member 1 OS=Dictyostelium discoideum GN=abcB1 PE=3 SV=1) HSP 1 Score: 494.967 bits (1273), Expect = 7.674e-161 Identity = 274/609 (44.99%), Postives = 406/609 (66.67%), Query Frame = -3 Query: 167 LSDLE-----QGNAEEAVN-------VGFWRVFALAKPDAGKIFVATFALLIASTTNLLIPKYGGMIIDIVSRDIRTPEQQSEALEAVKNTVTYIVLIVVIGSVSTALRSWLFSSASERVVARLRRDLFSHLIHQEIAFFDVTRTGELLSRLSEDTQIIKNAATTNLSEALRNLTTASIG-VAFMFSSSWKLTLLSLAIVPVISVAIRRLGRYLKELSHKTQXXXXXXXXXXXXSFGAIRTVRSFAQEGFAISNYTEKVDETLQLGLKQAKLVGLFFGGVNAAFTFSVMAVVFYGAYLTITGSMTVGSLTSFILYSLTVGSAVSSLSGLYSTAMKAAGASRRVFQLLDRVSSMPKSGDKCPEGNPDGDVELKDVWFAYPSRPSDMILKGITLKLKPGSKVALVGPSGGGKTTIANLIERFYDPLKGEILLNGVPLVEISHEYLHKKVSIVSQEPILFNCSIEENIAYGFXXXXXXXXXXSVAKMANAHEFIDKFPEKYKTVVGERGLRLSGGQKQRIAIARALLMNPKVLLLDEATSALDAESEYLVQDAMDSLMRGRTVLVIAHRLSTVQSADTVAVISNGEIAESGTHEDLLRE-DGIYTALVRRQL 1951 LSD E Q N E+ +N R+ L++P+ I A AL+ +S T+L +P + G I+ +V+ + + + ++ +V+I VIGS+ST +RSWLF A ++ VAR+RR+LFS +++QEI +FD RTGELLSRLS D+Q+I+N+ T N+S R T IG V +F ++W+LTLL L IVPV++++ G+ +K+L + Q A +S+ EE IRTVRSF++E I Y++ ++ + +G A G+F G V +++ +V+ GA + G+++ G LTSF+LY+L++ +++ +S L + +KA G+S R+F++ DRV ++ SG K + NP G++ELKDV F+YP+RP++ +LKG+ LKL G+ ALVGPSGGGK+T+ +IERFYDP G I +G+ + E+ + + VSQEP+LF SI++NI +G + ++ +I S A+ ANAH FI++F Y T+VGERG+RLSGGQKQR+AIARA++ NP +LLLDEATSALDAESEYLV+ A+D +M+ RTV+VIAHRLSTV +A+TV VI+ G+I E GTH++LL DGIY LV+RQL Sbjct: 308 LSDKEKQFYNQSNEEKRLNKKVEVKHSNLKRLIQLSRPELPIILAAMVALVFSSLTSLAMPYFFGSIVQVVA--------TTHSFNNLNSSTLALVVIFVIGSISTLVRSWLFYLAGQKFVARIRRNLFSSIVNQEIGYFDQCRTGELLSRLSSDSQVIQNSVTVNISMLFR-YTIQIIGSVILLFITNWRLTLLMLGIVPVLAISTVVYGKKIKQLGKQFQDELAKSSTTGEEVISNIRTVRSFSKEQKFIDLYSKDINGSYLIGKSLAVATGVFSGIVFLVAQLAIVLIVYVGARQVLDGTLSTGDLTSFLLYTLSLAMSLAFISSLMTDFLKAIGSSDRIFEIFDRVPAINVSGGKQIQ-NPLGEIELKDVEFSYPTRPNNSVLKGLNLKLSKGTITALVGPSGGGKSTVIAMIERFYDPNSGSITFDGIDIKELDPVWYRGIIGYVSQEPVLFAGSIKDNITFG-NDSATMDQIISAAEKANAHSFIEEFENGYDTIVGERGVRLSGGQKQRVAIARAMIQNPMILLLDEATSALDAESEYLVKQAIDEIMKDRTVIVIAHRLSTVINANTVVVINQGKIEEMGTHKELLNNTDGIYHNLVKRQL 905
BLAST of g.arboreum_cottongen_reftransV1_0010184 vs. ExPASy Swiss-Prot
Match: ABCBA_MOUSE (ATP-binding cassette sub-family B member 10, mitochondrial OS=Mus musculus GN=Abcb10 PE=1 SV=1) HSP 1 Score: 465.307 bits (1196), Expect = 9.840e-152 Identity = 262/608 (43.09%), Postives = 383/608 (62.99%), Query Frame = -3 Query: 170 QQAAESPLSDLEQGNAEEAVNVG---FWRVFALAKPDAGKIFVATFALLIASTTNLLIPKYGGMIIDIVSRDIRTPEQQSEALEAVKNTVTYIVLIVVIGSVSTALRSWLFSSASERVVARLRRDLFSHLIHQEIAFFDVTRTGELLSRLSEDTQIIKNAATTNLSEALRNLTTASIGVAFMFSSSWKLTLLSLAIVPVISVAIRRLGRYLKELSHKTQXXXXXXXXXXXXSFGAIRTVRSFAQEGFAISNYTEKVDETLQLGLKQAKLVGLFFGGVNAAFTFSVMAVVFYGAYLTITGSMTVGSLTSFILYSLTVGSAVSSLSGLYSTAMKAAGASRRVFQLLDRVSSMP-KSGDKCPEGNPDGDVELKDVWFAYPSRPSDMILKGITLKLKPGSKVALVGPSGGGKTTIANLIERFYDPLKGEILLNGVPLVEISHEYLHKKVSIVSQEPILFNCSIEENIAYGF--XXXXXXXXXXSVAKMANAHEFIDKFPEKYKTVVGERGLRLSGGQKQRIAIARALLMNPKVLLLDEATSALDAESEYLVQDAMDSLMRGRTVLVIAHRLSTVQSADTVAVISNGEIAESGTHED-LLREDGIYTALVRRQ 1972 Q AA + + DL + G W++ L +P+ G++ A L ++S + P + G IID++ + E ++L + +T + L G+ + +R +L S+ + +V RLR LFS ++ QE+AFFD TRTGEL++RLS DT ++ + T NLS+ LR AS+GV MF S L L++VP ISV GRYL++LS TQ + A A+ +AEE G IRT+R+F +E + YT +VD+ LQL K+A FFG + V++V++ G L + MTVG L+SF++Y+ VG ++ LS YS MK GA R+++LL+R +P G E G +E ++V F YP+RP + + +L + GS ALVGPSG GK+T+ +L+ R YDP G + L+G + +++ +L K+ VSQEP+LF+CS+ ENIAYG ++ ++E A++ANA EFI FP+ + TVVGE+G+ LSGGQKQRIAIARALL NPK+LLLDEATSALDAE+E+LVQ+A+D LM GRTVL+IAHRLST+++A+ VAV+ +G+I E GTHE+ LL+ +G+Y L+ +Q Sbjct: 96 QGAAATGVRDLGNDSQRRPAATGRSEVWKLLGLVRPERGRLSAAVGFLAVSSVITMSAPFFLGRIIDVIYTN--PSEGYGDSLTRLCAVLTCVFLC---GAAANGIRVYLMQSSGQSIVNRLRTSLFSSILRQEVAFFDKTRTGELINRLSSDTALLGRSVTENLSDGLRAGAQASVGVGMMFFVSPSLATFVLSVVPPISVLAVIYGRYLRKLSKATQDSLAEATQLAEERIGNIRTIRAFGKEMTEVEKYTGRVDQLLQLAQKEALARAGFFGAAGLSGNLIVLSVLYKGGLLMGSAHMTVGELSSFLMYAFWVGLSIGGLSSFYSELMKGLGAGGRLWELLERQPRLPFNEGMVLDEKTFQGALEFRNVHFTYPARPEVSVFQDFSLSIPSGSVTALVGPSGSGKSTVVSLLLRLYDPNSGTVSLDGHDIRQLNPVWLRSKIGTVSQEPVLFSCSVAENIAYGADNLSSVTAQQVERAAEVANAAEFIRSFPQGFDTVVGEKGILLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEHLVQEALDRLMEGRTVLIIAHRLSTIKNANFVAVLDHGKICEHGTHEELLLKPNGLYRKLMNKQ 698
BLAST of g.arboreum_cottongen_reftransV1_0010184 vs. ExPASy Swiss-Prot
Match: ABCBA_HUMAN (ATP-binding cassette sub-family B member 10, mitochondrial OS=Homo sapiens GN=ABCB10 PE=1 SV=2) HSP 1 Score: 453.751 bits (1166), Expect = 4.714e-147 Identity = 259/584 (44.35%), Postives = 372/584 (63.70%), Query Frame = -3 Query: 170 RVFALAKPDAGKIFVATFALLIASTTNLLIPKYGGMIIDIVSRDIRTPEQQSEALEAVKNTVTYIVL----IVVIGSVSTALRSWLFSSASERVVARLRRDLFSHLIHQEIAFFDVTRTGELLSRLSEDTQIIKNAATTNLSEALRNLTTASIGVAFMFSSSWKLTLLSLAIVPVISVAIRRLGRYLKELSHKTQXXXXXXXXXXXXSFGAIRTVRSFAQEGFAISNYTEKVDETLQLGLKQAKLVGLFFGGVNAAFTFSVMAVVFYGAYLTITGSMTVGSLTSFILYSLTVGSAVSSLSGLYSTAMKAAGASRRVFQLLDRVSSMP-KSGDKCPEGNPDGDVELKDVWFAYPSRPSDMILKGITLKLKPGSKVALVGPSGGGKTTIANLIERFYDPLKGEILLNGVPLVEISHEYLHKKVSIVSQEPILFNCSIEENIAYGF--XXXXXXXXXXSVAKMANAHEFIDKFPEKYKTVVGERGLRLSGGQKQRIAIARALLMNPKVLLLDEATSALDAESEYLVQDAMDSLMRGRTVLVIAHRLSTVQSADTVAVISNGEIAESGTHEDLL-REDGIYTALVRRQ 1897 ++ LA P+ ++ A L ++S ++ P + G IID++ + + +T + L + + G+ + A+R +L ++ +R+V RLR LFS ++ QE+AFFD TRTGEL++RLS DT ++ + T NLS+ LR AS+G++ MF S L L++VP +S+ GRYL++L+ TQ + A A+ +AEE G +RTVR+F +E I Y KVD +QL K+A FFG + V++V++ G L + MTVG L+SF++Y+ VG ++ LS YS MK GA R+++LL+R +P G E + G +E K+V FAYP+RP I + +L + GS ALVGPSG GK+T+ +L+ R YDP G I L+G + +++ +L K+ VSQEPILF+CSI ENIAYG ++ EI+ VA++ANA FI FP+ + TVVGE+G+ LSGGQKQRIAIARALL NPK+LLLDEATSALDAE+EYLVQ+A+D LM GRTVLVIAHRLST+++A+ VAV+ G+I E G HE+LL + +GIY L+ +Q Sbjct: 159 KLLGLAYPERRRLAAAVGFLTMSSVISMSAPFFLGKIIDVI---------YTNPTVDYSDNLTRLCLGLSAVFLCGAAANAIRVYLMQTSGQRIVNRLRTSLFSSILRQEVAFFDKTRTGELINRLSSDTALLGRSVTENLSDGLRAGAQASVGISMMFFVSPNLATFVLSVVPPVSIIAVIYGRYLRKLTKVTQDSLAQATQLAEERIGNVRTVRAFGKEMTEIEKYASKVDHVMQLARKEAFARAGFFGATGLSGNLIVLSVLYKGGLLMGSAHMTVGELSSFLMYAFWVGISIGGLSSFYSELMKGLGAGGRLWELLEREPKLPFNEGVILNEKSFQGALEFKNVHFAYPARPEVPIFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYDPASGTISLDGHDIRQLNPVWLRSKIGTVSQEPILFSCSIAENIAYGADDPSSVTAEEIQRVAEVANAVAFIRNFPQGFNTVVGEKGVLLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEYLVQEALDRLMDGRTVLVIAHRLSTIKNANMVAVLDQGKITEYGKHEELLSKPNGIYRKLMNKQ 733
BLAST of g.arboreum_cottongen_reftransV1_0010184 vs. ExPASy Swiss-Prot
Match: ABCB9_HUMAN (ATP-binding cassette sub-family B member 9 OS=Homo sapiens GN=ABCB9 PE=1 SV=1) HSP 1 Score: 421.779 bits (1083), Expect = 2.258e-134 Identity = 234/609 (38.42%), Postives = 358/609 (58.78%), Query Frame = -3 Query: 101 EEAVNVGFWRVFALAKPDAGKIFVATFALLIASTTNLLIPKYGGMIID-IVSRDIRTPEQQSEALEAVKNTVTYIVLIVVIGSVSTALRSWLFSSASERVVARLRRDLFSHLIHQEIAFFDVTRTGELLSRLSEDTQIIKNAATTNLSEALRNLTTASIGVAFMFSSSWKLTLLSLAIVPVISVAIRRLGRYLKELSHKTQXXXXXXXXXXXXSFGAIRTVRSFAQEGFAISNYTEKVDETLQLGLKQAKLVGLFFGGVNAAFTFSVMAVVFYGAYLTITGSMTVGSLTSFILYSLTVGSAVSSLSGLYSTAMKAAGASRRVFQLLDRVSSMPKSGDKCPEGNPDGDVELKDVWFAYPSRPSDMILKGITLKLKPGSKVALVGPSGGGKTTIANLIERFYDPLKGEILLNGVPLVEISHEYLHKKVSIVSQEPILFNCSIEENIAYGFXXXXXXXXXXSVAKMANAHEFIDKFPEKYKTVVGERGLRLSGGQKQRIAIARALLMNPKVLLLDEATSALDAESEYLVQDAMDSLMRGRTVLVIAHRLSTVQSADTVAVISNGEIAESGTHEDLLREDGIYTALVRRQLQGPTTKI*FQNGKQGPYTCSAH 1924 E+A ++ + KPD + A+F L++A+ +P Y G ID IV + ++++ V + L+ + S + +R +F+ R+ RLR LF L+ QE +FFD RTG+L+SRL+ DT ++ + + N++ LRN + V FMFS SW+L+L++ P+I + G+Y K LS + Q A A AS+ AEE+ A++TVRSFA E Y K+ + +L K+A + G +++++YG +L I+G MT G+L +FI+Y +G + S+ +YS M+ GA+ +VF+ +DR +M G P+ + +G V+ ++V F Y +RP +L+ ++ L PG ALVGPSG GK++ N++E FY G +LL+G P+ H+YLH+ +S+VSQEP+LF SI +NI+YG +E+ A+ ANAH FI + + Y T GE+G +LSGGQKQR+A+ARAL+ NP VL+LDEATSALDAESEYL+Q A+ ++ TVL+IAHRLSTV+ A + V+ G + + GTH+ LL + G+Y LV+RQ+ G F G P +H Sbjct: 167 EQASGATLQKLLSYTKPDVAFLVAASFFLIVAALGETFLPYYTGRAIDGIVIQ---------KSMDQFSTAVVIVCLLAIGSSFAAGIRGGIFTLIFARLNIRLRNCLFRSLVSQETSFFDENRTGDLISRLTSDTTMVSDLVSQNINVFLRNTVKVTGVVVFMFSLSWQLSLVTFMGFPIIMMVSNIYGKYYKRLSKEVQNALARASNTAEETISAMKTVRSFANEEEEAEVYLRKLQQVYKLNRKEAAAYMYYVWGSGLTLLVVQVSILYYGGHLVISGQMTSGNLIAFIIYEFVLGDCMESVGSVYSGLMQGVGAAEKVFEFIDRQPTMVHDGSLAPD-HLEGRVDFENVTFTYRTRPHTQVLQNVSFSLSPGKVTALVGPSGSGKSSCVNILENFYPLEGGRVLLDGKPISAYDHKYLHRVISLVSQEPVLFARSITDNISYGLPTVPFEMVVEA-AQKANAHGFIMELQDGYSTETGEKGAQLSGGQKQRVAMARALVRNPPVLILDEATSALDAESEYLIQQAIHGNLQKHTVLIIAHRLSTVEHAHLIVVLDKGRVVQQGTHQQLLAQGGLYAKLVQRQMLGLQPAADFTAGHNEPVANGSH 764
BLAST of g.arboreum_cottongen_reftransV1_0010184 vs. ExPASy Swiss-Prot
Match: ABCB9_RAT (ATP-binding cassette sub-family B member 9 OS=Rattus norvegicus GN=Abcb9 PE=1 SV=1) HSP 1 Score: 419.468 bits (1077), Expect = 1.315e-133 Identity = 230/609 (37.77%), Postives = 362/609 (59.44%), Query Frame = -3 Query: 101 AEEAVNVGFWRVFALAKPDAGKIFVATFALLIASTTNLLIPKYGGMIIDIVSRDIRTPEQQSEALEAVKNTVTYIVLIVVIGSVSTALRSWLFSSASERVVARLRRDLFSHLIHQEIAFFDVTRTGELLSRLSEDTQIIKNAATTNLSEALRNLTTASIGVAFMFSSSWKLTLLSLAIVPVISVAIRRLGRYLKELSHKTQXXXXXXXXXXXXSFGAIRTVRSFAQEGFAISNYTEKVDETLQLGLKQAKLVGLFFGGVNAAFTFSVMAVVFYGAYLTITGSMTVGSLTSFILYSLTVGSAVSSLSGLYSTAMKAAGASRRVFQLLDRVSSMPKSGDKCPEGNPDGDVELKDVWFAYPSRPSDMILKGITLKLKPGSKVALVGPSGGGKTTIANLIERFYDPLKGEILLNGVPLVEISHEYLHKKVSIVSQEPILFNCSIEENIAYGFXXXXXXXXXXSVAKMANAHEFIDKFPEKYKTVVGERGLRLSGGQKQRIAIARALLMNPKVLLLDEATSALDAESEYLVQDAMDSLMRGRTVLVIAHRLSTVQSADTVAVISNGEIAESGTHEDLLREDGIYTALVRRQLQGPTTKI*FQNGKQGPYTCSAH 1927 AE+A ++ + KPD + A+F L++A+ +P Y G ID + ++++ V + L+ + S++ +R +F+ R+ RLR LF L+ QE +FFD RTG+L+SRL+ DT ++ + + N++ LRN + V FMFS SW+L+L++ P+I + G+Y K LS + Q+A A AS+ AEE+ A++TVRSFA E + K+ + +L K+A + G +++++YG +L I+G M+ G+L +FI+Y +G + S+ +YS M+ GA+ +VF+ +DR +M G P+ + +G V+ ++V F Y +RP +L+ ++ L PG ALVGPSG GK++ N++E FY G +LL+G P+ H+YLH+ +S+VSQEP+LF SI +NI+YG +E+ A+ ANAH FI + + Y T GE+G +LSGGQKQR+A+ARAL+ NP VL+LDEATSALDAESEYL+Q A+ ++ TVL+IAHRLSTV+ A + V+ G + + GTH+ LL + G+Y LV+RQ+ G + + G + P + + H Sbjct: 162 AEQASGATLQKLLSYTKPDVAFLVAASFFLIVAALGETFLPYYTGRAIDSIVIQ--------KSMDQFTTAVVVVCLLAIGSSLAAGIRGGIFTLVFARLNIRLRNCLFRSLVSQETSFFDENRTGDLISRLTSDTTMVSDLVSQNINIFLRNTVKVTGVVVFMFSLSWQLSLVTFMGFPIIMMVSNIYGKYYKRLSKEVQSALARASTTAEETISAMKTVRSFANEEEEAEVFLRKLQQVYKLNRKEAAAYMSYVWGSGLTLLVVQVSILYYGGHLVISGQMSSGNLIAFIIYEFVLGDCMESVGSVYSGLMQGVGAAEKVFEFIDRQPTMVHDGRLAPD-HLEGRVDFENVTFTYRTRPHTQVLQNVSFSLSPGKVTALVGPSGSGKSSCVNILENFYPLQGGRVLLDGEPIGAYDHKYLHRVISLVSQEPVLFARSITDNISYGLPTVPFEMVVEA-AQKANAHGFIMELQDGYSTETGEKGAQLSGGQKQRVAMARALVRNPPVLILDEATSALDAESEYLIQQAIHGNLQRHTVLIIAHRLSTVERAHLIVVLDKGRVVQQGTHQQLLAQGGLYAKLVQRQMLGLEHPLDYTAGHKEPPSNTEH 760
BLAST of g.arboreum_cottongen_reftransV1_0010184 vs. ExPASy Swiss-Prot
Match: ABCB9_MOUSE (ATP-binding cassette sub-family B member 9 OS=Mus musculus GN=Abcb9 PE=2 SV=1) HSP 1 Score: 417.542 bits (1072), Expect = 7.659e-133 Identity = 229/609 (37.60%), Postives = 361/609 (59.28%), Query Frame = -3 Query: 101 AEEAVNVGFWRVFALAKPDAGKIFVATFALLIASTTNLLIPKYGGMIIDIVSRDIRTPEQQSEALEAVKNTVTYIVLIVVIGSVSTALRSWLFSSASERVVARLRRDLFSHLIHQEIAFFDVTRTGELLSRLSEDTQIIKNAATTNLSEALRNLTTASIGVAFMFSSSWKLTLLSLAIVPVISVAIRRLGRYLKELSHKTQXXXXXXXXXXXXSFGAIRTVRSFAQEGFAISNYTEKVDETLQLGLKQAKLVGLFFGGVNAAFTFSVMAVVFYGAYLTITGSMTVGSLTSFILYSLTVGSAVSSLSGLYSTAMKAAGASRRVFQLLDRVSSMPKSGDKCPEGNPDGDVELKDVWFAYPSRPSDMILKGITLKLKPGSKVALVGPSGGGKTTIANLIERFYDPLKGEILLNGVPLVEISHEYLHKKVSIVSQEPILFNCSIEENIAYGFXXXXXXXXXXSVAKMANAHEFIDKFPEKYKTVVGERGLRLSGGQKQRIAIARALLMNPKVLLLDEATSALDAESEYLVQDAMDSLMRGRTVLVIAHRLSTVQSADTVAVISNGEIAESGTHEDLLREDGIYTALVRRQLQGPTTKI*FQNGKQGPYTCSAH 1927 AE+A ++ + KPD + A+F L++A+ +P Y G ID + ++++ V + L+ + S++ +R +F+ R+ RLR LF L+ QE +FFD RTG+L+SRL+ DT ++ + + N++ LRN + V FMFS SW+L+L++ P+I + G+Y K LS + Q+A A AS+ AEE+ A++TVRSFA E + K+ + +L K+A + G +++++YG +L I+G M+ G+L +FI+Y +G + S+ +YS M+ GA+ +VF+ +DR +M G P+ + +G V+ ++V F Y +RP +L+ ++ L PG ALVGPSG GK++ N++E FY G +LL+G P+ H+YLH+ +S+VSQEP+LF SI +NI+YG +E+ A+ ANAH FI + + Y T GE+G +LSGGQKQR+A+ARAL+ NP VL+LDEATSALDAESEYL+Q A+ ++ TVL+IAHRLSTV+ A + V+ G + + GTH+ LL + G+Y LV+RQ+ G + + + P + + H Sbjct: 162 AEQASGATLQKLLSYTKPDVAFLVAASFFLIVAALGETFLPYYTGRAIDSIVIQ--------KSMDQFTTAVVVVCLLAIGSSLAAGIRGGIFTLVFARLNIRLRNCLFRSLVSQETSFFDENRTGDLISRLTSDTTMVSDLVSQNINIFLRNTVKVTGVVVFMFSLSWQLSLVTFMGFPIIMMVSNIYGKYYKRLSKEVQSALARASTTAEETISAMKTVRSFANEEEEAEVFLRKLQQVYKLNRKEAAAYMSYVWGSGLTLLVVQVSILYYGGHLVISGQMSSGNLIAFIIYEFVLGDCMESVGSVYSGLMQGVGAAEKVFEFIDRQPTMVHDGSLAPD-HLEGRVDFENVTFTYRTRPHTQVLQNVSFSLSPGKVTALVGPSGSGKSSCVNILENFYPLQGGRVLLDGKPIGAYDHKYLHRVISLVSQEPVLFARSITDNISYGLPTVPFEMVVEA-AQKANAHGFIMELQDGYSTETGEKGAQLSGGQKQRVAMARALVRNPPVLILDEATSALDAESEYLIQQAIHGNLQRHTVLIIAHRLSTVERAHLIVVLDKGRVVQQGTHQQLLAQGGLYAKLVQRQMLGLEHPLDYTASHKEPPSNTEH 760
BLAST of g.arboreum_cottongen_reftransV1_0010184 vs. ExPASy Swiss-Prot
Match: ABCB4_DICDI (ABC transporter B family member 4 OS=Dictyostelium discoideum GN=abcB4 PE=3 SV=1) HSP 1 Score: 395.201 bits (1014), Expect = 3.666e-124 Identity = 254/660 (38.48%), Postives = 392/660 (59.39%), Query Frame = -3 Query: 179 KEVRFPISGVFVVVSVLMGKKHSLDETXXXXXXXXSERAPLLNKEANKQTNG--QQAAESPLSD--LEQGNAEEAVN-VGFWRVFALAKPDAGKIFVATFALLIA---STTNLLIPKYGGMIIDIVSRDIRTPEQQSEALEAVKNTVTYIVLIVVIGSVSTALRSWLFSSASERVVARLRRDLFSHLIHQEIAFFDVTRTGELLSRLSEDTQIIKNAATTNLSEALRNLTTASIGVAFMFSSSWKLTLLSLAIVP-VISVAIRRLGRYLKELSHKTQXXXXXXXXXXXXSFGAIRTVRSFAQEGFAISNYTEKVDETLQLGLKQAKLVGLFFGGVNAAFTFSVMAVVFYGAYLTITGSMTVGSLTSFILYSLTVGSAVSSLSGLYSTAMKAAGASRRVFQLLDRVSSM-PKSGDKCPEGNPDGDVELKDVWFAYPSRPSDMILKGITLKLKPGSKVALVGPSGGGKTTIANLIERFYDPLKGEILLNGVPLVEISHEYLHKKVSIVSQEPILFNCSIEENIAYGFXXXXXXXXXXSVAKMANAHEFIDKFPEKYKTVVGERGLRLSGGQKQRIAIARALLMNPKVLLLDEATSALDAESEYLVQDAMDSLMRGRTVLVIAHRLSTVQSADTVAVISNGEIAESGTHEDLLREDGIYTALV 2128 K++ F I G FV+ + K + ++ +LN +K N + +S D +E+ + ++ + + +++F K I++ F ++ A S L IPK G++ID Q A++A+ I++ + L S + S A ER ARLR LF ++ QEI FFD TG+L++RLS D Q++++A ++S +++ GV + S KL+L + I+P ++SV G +LK LS ++Q A A ++ +AEE+ G IRTV++F+ + + + EK +L L + +G+F G + A + V +YG L G MT G LTSFI++++ + S+ S LS L++ M A G +R+ +L++RV + G K E G+++ +V F YP+RP +L G+ L LKPG VAL G SGGGK+TIA L+ERFYD G+I ++G + +++ ++L ++ IVSQEP LF +I EN+ YG + ++ EI AK+ANAH+FI FP+ Y+T+VGERG++LSGGQKQRIAIARA+L NP++++LDEATSALD++SE LVQ A+D+LM+GRT LVIAHRLSTVQ+AD + V+S+G+IAE G H +L+ G+Y LV Sbjct: 122 KDILFIIVGTFVIFKIYDNK------IGIVFCENEIDKETILNDPYDKIPNEIIVELKDSAKDDNIIEESDEDDGIKKISSFKLFF--KTIGNDIWLFGFGIITAFFSSWVGLQIPKVFGVLIDCTKNG---DSLQGPAIQAI--------FILLAQAGLNFLYSTMISVACERYSARLRSTLFGAMLEQEIGFFDQNSTGDLINRLSSDVQLVRSALKHSVSLGVKSFGQIVGGVISLILISPKLSLGMMTILPTMVSVGTFYAG-WLKSLSVRSQRAQAQSTIVAEEAIGNIRTVQAFSNQHYESERFIEKNQHSLALSTESGVQIGIFQGVTSLALNSVSLLVYWYGGTLVSRGEMTGGQLTSFIIHTMNMQSSFSQLSILFTQIMSAMGGMQRITELINRVPLINSNQGFKLRE--LKGEIKFINVDFKYPTRPHVHVLNGLNLTLKPGQVVALAGSSGGGKSTIAGLLERFYDISNGDITIDGYSIKQLNAKWLRSRIGIVSQEPSLFATTILENLRYG-NPNATEDEIIEAAKLANAHQFISNFPKGYETIVGERGVQLSGGQKQRIAIARAILKNPQIIILDEATSALDSQSELLVQTALDNLMKGRTTLVIAHRLSTVQNADLIGVLSHGKIAEFGNHNELMNHKGLYYKLV 758
BLAST of g.arboreum_cottongen_reftransV1_0010184 vs. ExPASy Swiss-Prot
Match: ABCB8_DANRE (ATP-binding cassette sub-family B member 8, mitochondrial OS=Danio rerio GN=abcb8 PE=2 SV=1) HSP 1 Score: 386.726 bits (992), Expect = 1.327e-121 Identity = 231/581 (39.76%), Postives = 350/581 (60.24%), Query Frame = -3 Query: 170 WRV-FALAKPDAGKIFVATFALLIASTTNLLIPKYGGMIIDIVSRDIRTPEQQSEALEAVKNTVTYIVLIVVIGSVSTALRSWLFSSASERVVARLRRDLFSHLIHQEIAFFDVTRTGELLSRLSEDTQIIKNAATTNLSEALRNLT-TASIGVAFMFSSSWKLTLLSLAIVPVISVAIRRLGRYLKELSHKTQXXXXXXXXXXXXSFGAIRTVRSFAQEGFAISNYTEKVDETLQLGLKQAKLVGLFFGGVNAAFTFSVMAVVFYGAYLTITGSMTVGSLTSFILYSLTVGSAVSSLSGLYSTAMKAAGASRRVFQLLDRVSSMP-KSGDKCPEGNPDGDVELKDVWFAYPSRPSDMILKGITLKLKPGSKVALVGPSGGGKTTIANLIERFYDPLKGEILLNGVPLVEISHEYLHKKV-SIVSQEPILFNCSIEENIAYGFXXXXXXXXXXSVAKMANAHEFIDKFPEKYKTVVGERGLRLSGGQKQRIAIARALLMNPKVLLLDEATSALDAESEYLVQDAMDSLMRGRTVLVIAHRLSTVQSADTVAVISNGEIAESGTHEDLLREDGIYTALVRRQ 1900 W V + +P + A A+ N+ IP G ++++V+R +R EQ + ++ ++ + + + T+ L S ERV A +R LF+ L+ Q+IAFFD +TG+L++RL+ D Q K++ +S+ LR+ T T V+ F S KLT L++ ++P + A +G +L++LS K Q A A+ +A+E+ G +RTVR+FA E + Y +V ++ + + +F G N V+ +F G L ++ G L SF++ S TV +++S+S L+ ++ A RVF+ L S+P G + P + G V+ ++ F+YP+RP + ILK +L L P VA+VG SGGGK+T+A L+ERFYDP G ++L+G+ + + +L V +SQEP+LF S+ ENI +G ++ +E+ S AK ANAH FI F + Y TVVGERG+ LSGGQKQRIAIARAL+ NP +L+LDEATSALDAESE +VQ+A+D GRTVL+IAHRLST+Q+AD + V+SNG I E+GTH +LL + G+Y L++RQ Sbjct: 132 WAVLWEFVRPQLFALMGAILLAFGAAALNIQIPLMLGDLVNVVARHMR--EQAGHYMRDIQAPAVKLLGLYALQGLLTSGYIILLSRVGERVAADMRTTLFTSLLRQDIAFFDANKTGQLVNRLTSDIQEFKSSFKLVISQGLRSATQTVGCFVSLYFISP-KLTGLTVVVLPCLVGAGALIGSFLRKLSRKAQEQVAKATGVADEALGNVRTVRAFAMEDRELEMYAAEVQKSAAMNETLGTGIAVFQGLSNIVLNCIVLGTIFAGGSLMARDDLSPGDLMSFLVASQTVQRSLASISILFGQMVRGMSAGARVFEYLALDPSVPLTGGGRIPLDSLMGRVDFMNISFSYPTRPGNQILKHFSLTLPPCKTVAIVGESGGGKSTVAALLERFYDPSSGVVMLDGLDIRTLDPSWLRGHVIGFISQEPVLFGTSVMENIRFG-KPSATDAEVVSAAKQANAHNFITGFADGYNTVVGERGVTLSGGQKQRIAIARALVKNPSILILDEATSALDAESERVVQEALDRATTGRTVLIIAHRLSTIQAADLICVMSNGRIVEAGTHLELLSKGGLYAELIKRQ 708 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0010184 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0010184 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0010184 ID=g.arboreum_cottongen_reftransV1_0010184; Name=g.arboreum_cottongen_reftransV1_0010184; organism=Gossypium arboreum; type=contig; length=2148bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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