g.raimondii_cottongen_reftransV1_0001237, g.raimondii_cottongen_reftransV1_0001237 (contig) Gossypium raimondii
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.raimondii_cottongen_reftransV1_0001237 vs. ExPASy TrEMBL
Match: A0A067LCT9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10121 PE=4 SV=1) HSP 1 Score: 508.834 bits (1309), Expect = 5.215e-172 Identity = 259/305 (84.92%), Postives = 283/305 (92.79%), Query Frame = 1 Query: 145 MESMNSFWQLGDDLRGQSKASEDHKWLMVASKLAEQTRIKGERMNNLDLSKGPAEVRTRDKFGFHEDNKFENLNFNMLNLDSKIGDSISKSTFRNGIYNTDAVYQKNNSHNIGNLSANKYSGNNHCNKD--IXXXXXXXXXXXXXXXXXXXXDKRFKTLPATETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIRIRKVCKALEEDAFRPVLHHYDGPKFRLELSVPETLDLMDLCEQAGSP 1053 ME+M+SFWQLGD+LRGQSK SEDHKW M ASKLAEQTR KGERMNNLDLSKG AE+R R+K GF EDNKFE LNFNMLNL++K+G+++SKS+FRNG+YN +AVYQKNN +NIGNL+ +KYSGN K+ N N+N+N+NNNENNNANNA DKRFKTLPATETL RNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIR+RK+CKALEEDAFRPVLHHYDGPKFRLELSVPETLDL+DLCEQAGSP Sbjct: 1 MENMHSFWQLGDELRGQSKVSEDHKWFMAASKLAEQTRSKGERMNNLDLSKGLAEIRPREKIGFQEDNKFETLNFNMLNLETKMGENVSKSSFRNGVYNMNAVYQKNNINNIGNLTGSKYSGNIQNVKEPNNNINNNSNNNNNENNNANNAVDKRFKTLPATETLRRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIRVRKLCKALEEDAFRPVLHHYDGPKFRLELSVPETLDLLDLCEQAGSP 305
BLAST of g.raimondii_cottongen_reftransV1_0001237 vs. ExPASy TrEMBL
Match: B9RBI2_RICCO (B2 protein, putative OS=Ricinus communis GN=RCOM_1677160 PE=4 SV=1) HSP 1 Score: 508.449 bits (1308), Expect = 8.802e-172 Identity = 255/303 (84.16%), Postives = 280/303 (92.41%), Query Frame = 1 Query: 145 MESMNSFWQLGDDLRGQSKASEDHKWLMVASKLAEQTRIKGERMNNLDLSKGPAEVRTRDKFGFHEDNKFENLNFNMLNLDSKIGDSISKSTFRNGIYNTDAVYQKNNSHNIGNLSANKYSGNNHCNKDIXXXXXXXXXXXXXXXXXXXXDKRFKTLPATETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIRIRKVCKALEEDAFRPVLHHYDGPKFRLELSVPETLDLMDLCEQAGSP 1053 MESM+SFWQLGD+LRGQSK SEDHKW+M ASKLAEQTR+KGERMNNLDLSKG AE+ RDK GF EDNKFE+LNFNM NL+ K+ +++SK +FRNGIYN +AVYQKNN +NI NL+ +KY GNN K+ NNNSN ++NN ENNNAN+A DKRFKTLPATETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEA+SFGGSNIDPTAWEDKKCKGESRFPAQVRIR+RK+CKALEEDAFRPVLHHYDGPKFRLELS+PETLDL+DLCEQAGSP Sbjct: 1 MESMHSFWQLGDELRGQSKVSEDHKWIMAASKLAEQTRVKGERMNNLDLSKGLAEIWPRDKLGFQEDNKFESLNFNMSNLEPKMTENVSKISFRNGIYNMNAVYQKNNMNNIINLTGSKYMGNNQSIKEPNNNSNNSNNNVENNNANSAVDKRFKTLPATETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEASSFGGSNIDPTAWEDKKCKGESRFPAQVRIRVRKLCKALEEDAFRPVLHHYDGPKFRLELSIPETLDLLDLCEQAGSP 303
BLAST of g.raimondii_cottongen_reftransV1_0001237 vs. ExPASy TrEMBL
Match: W9SYU1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_010769 PE=4 SV=1) HSP 1 Score: 504.597 bits (1298), Expect = 2.017e-170 Identity = 256/302 (84.77%), Postives = 280/302 (92.72%), Query Frame = 1 Query: 145 MESMNSFWQLGDDLRGQSKASEDHKWLMVASKLAEQTRIKGERMNNLDLSKGPAEVRTRDKFGFHEDNKFENLNFNMLNLDSKIGDSISKSTFRNGIYNTDAVYQKNNSHNIGNLSANKYSGNNHCNKDIXXXXXXXXXXXXXXXXXXXXDKRFKTLPATETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIRIRKVCKALEEDAFRPVLHHYDGPKFRLELSVPETLDLMDLCEQAGS 1050 MESMNSFWQLGD LR QSKASEDH+WLM ASKLAEQTRIKGERMNNLDLSKGPAE R DKFG+ EDNK E LNFNMLNLDSK+ ++++K++FRNG+YN +A+YQK+N++ +GN++ NKYSGNN + N+N+NSNNNEN NAN+A DKRFKTLPATETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIRIRK+CKALEEDAFRPVLHHYDGPKFRLELSVPETLDL+DLCEQAGS Sbjct: 1 MESMNSFWQLGDQLRVQSKASEDHQWLMAASKLAEQTRIKGERMNNLDLSKGPAEPRPMDKFGYQEDNKCEILNFNMLNLDSKLTENVNKASFRNGMYNMNAMYQKSNTNILGNMTGNKYSGNNV--SNKEFNNNSNSNNNENGNANSAIDKRFKTLPATETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIRIRKLCKALEEDAFRPVLHHYDGPKFRLELSVPETLDLLDLCEQAGS 300
BLAST of g.raimondii_cottongen_reftransV1_0001237 vs. ExPASy TrEMBL
Match: A0A0D2M3V1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G271300 PE=4 SV=1) HSP 1 Score: 504.212 bits (1297), Expect = 3.502e-170 Identity = 254/305 (83.28%), Postives = 281/305 (92.13%), Query Frame = 1 Query: 145 MESMNSFWQLGDDLRGQSKASEDHKWLMVASKLAEQTRIKGERMNNLDLSKGPAEVRTRDKFGFHEDNKFENLNFNMLNLDSKIGDSISKSTFRNGIYNTDAVYQKNNSHNIGNLSANKY--SGNNHCNKDIXXXXXXXXXXXXXXXXXXXXDKRFKTLPATETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIRIRKVCKALEEDAFRPVLHHYDGPKFRLELSVPETLDLMDLCEQAGSP 1053 ME N+FWQLGDDLRG SK +EDHKWLM ASKLAEQTR KGERMNNLDLSKG AE+RTRDKFGF EDNK ENLNFN+LNLDSK+GD++SKS+F+NG+YN +AVYQKNNS ++GN + NKY + ++ + + N+++ N+N NEN+NANNA DKRFKTLPATETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIRIRK+CKALEEDAFRPVLHHYDGPKFRLELS+PETLDL+DLCEQAGSP Sbjct: 1 MERTNNFWQLGDDLRGLSKVAEDHKWLMAASKLAEQTRTKGERMNNLDLSKGQAEMRTRDKFGFQEDNKLENLNFNVLNLDSKVGDNVSKSSFQNGMYNMNAVYQKNNSISLGNPTGNKYMSNNQSNNDVNNNSSTKNNNNGNENSNANNAVDKRFKTLPATETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIRIRKLCKALEEDAFRPVLHHYDGPKFRLELSIPETLDLLDLCEQAGSP 305
BLAST of g.raimondii_cottongen_reftransV1_0001237 vs. ExPASy TrEMBL
Match: A0A0D2QN81_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G073500 PE=4 SV=1) HSP 1 Score: 501.13 bits (1289), Expect = 4.876e-169 Identity = 252/289 (87.20%), Postives = 274/289 (94.81%), Query Frame = 1 Query: 145 MESMNSFWQLGDDLRGQSKASEDHKWLMVASKLAEQTRIKGERMNNLDLSKGPAEVRTRDKFGFHEDNKFENLNFNMLNLDSKIGDSISKSTFRNGIYNTDAVYQKNNSHNIGNLSANKYSGNNHCNKDIXXXXXXXXXXXXXXXXXXXXDKRFKTLPATETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIRIRKVCKALEEDAFRPVLHHYDGPKFRLELSVPE 1011 M SM+SFWQLGD LRGQSKASED+ WLMVASKLAEQTR KGER++NLDLSKGPAE+RTRDKFGF EDNKFENLNFNMLNLDSKIGD++SKS+FRNG YN +AVYQKNNS+++GNL+ NKYSGNNH +K +NNNS+T++NN+ N+ANNA DKRFKTLPA ETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAA+FGGSNIDPTAWEDKKCKGESRFPAQVRI IRK+CKALEEDAFRPVLHHYDGPKFRLELSVPE Sbjct: 1 MGSMDSFWQLGDYLRGQSKASEDNHWLMVASKLAEQTRTKGERLSNLDLSKGPAEIRTRDKFGFREDNKFENLNFNMLNLDSKIGDNVSKSSFRNGTYNINAVYQKNNSNSLGNLAGNKYSGNNHSSKYVNNNSSTSNNNSNENSANNAVDKRFKTLPAAETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAATFGGSNIDPTAWEDKKCKGESRFPAQVRICIRKLCKALEEDAFRPVLHHYDGPKFRLELSVPE 289
BLAST of g.raimondii_cottongen_reftransV1_0001237 vs. ExPASy TrEMBL
Match: A0A0B2PLD3_GLYSO (B2 protein OS=Glycine soja GN=glysoja_047184 PE=4 SV=1) HSP 1 Score: 498.434 bits (1282), Expect = 4.217e-168 Identity = 243/302 (80.46%), Postives = 271/302 (89.74%), Query Frame = 1 Query: 145 MESMNSFWQLGDDLRGQSKASEDHKWLMVASKLAEQTRIKGERMNNLDLSKGPAEVRTRDKFGFHEDNKFENLNFNMLNLDSKIGDSISKSTFRNGIYNTDAVYQKNNSHNIGNLSANKYSGNNHCNKDIXXXXXXXXXXXXXXXXXXXXDKRFKTLPATETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIRIRKVCKALEEDAFRPVLHHYDGPKFRLELSVPETLDLMDLCEQAGS 1050 ME+M SFWQLGD+LRG SKASEDHKWLMVASKLAEQTR+KGER+NNLDLSKGP E R+RDKFGF E+NKF++LN +MLNLDSK +++SKS+ RNG+Y +AVYQKNN++ + N+ +NKY+GN I +N N+N N +N NA DKRFKTLPA ETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIR+RK+CKALEED+FRPVLHHYDGPKFRLELSVPETLDL+DLCEQAGS Sbjct: 1 MENMQSFWQLGDELRGHSKASEDHKWLMVASKLAEQTRLKGERVNNLDLSKGPIETRSRDKFGFQEENKFDSLNLSMLNLDSKFTENVSKSSLRNGVYGMNAVYQKNNANLVSNVISNKYNGN------ILHNKEINNNTNNESNNTNATDKRFKTLPAAETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIRVRKLCKALEEDSFRPVLHHYDGPKFRLELSVPETLDLLDLCEQAGS 296
BLAST of g.raimondii_cottongen_reftransV1_0001237 vs. ExPASy TrEMBL
Match: C6TM49_SOYBN (Uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 498.434 bits (1282), Expect = 4.217e-168 Identity = 243/302 (80.46%), Postives = 271/302 (89.74%), Query Frame = 1 Query: 145 MESMNSFWQLGDDLRGQSKASEDHKWLMVASKLAEQTRIKGERMNNLDLSKGPAEVRTRDKFGFHEDNKFENLNFNMLNLDSKIGDSISKSTFRNGIYNTDAVYQKNNSHNIGNLSANKYSGNNHCNKDIXXXXXXXXXXXXXXXXXXXXDKRFKTLPATETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIRIRKVCKALEEDAFRPVLHHYDGPKFRLELSVPETLDLMDLCEQAGS 1050 ME+M SFWQLGD+LRG SKASEDHKWLMVASKLAEQTR+KGER+NNLDLSKGP E R+RDKFGF E+NKF++LN +MLNLDSK +++SKS+ RNG+Y +AVYQKNN++ + N+ +NKY+GN I +N N+N N +N NA DKRFKTLPA ETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIR+RK+CKALEED+FRPVLHHYDGPKFRLELSVPETLDL+DLCEQAGS Sbjct: 1 MENMQSFWQLGDELRGHSKASEDHKWLMVASKLAEQTRLKGERVNNLDLSKGPIETRSRDKFGFQEENKFDSLNLSMLNLDSKFTENVSKSSLRNGVYGMNAVYQKNNANLVSNVISNKYNGN------ILHNKEINNNTNNESNNTNATDKRFKTLPAAETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIRVRKLCKALEEDSFRPVLHHYDGPKFRLELSVPETLDLLDLCEQAGS 296
BLAST of g.raimondii_cottongen_reftransV1_0001237 vs. ExPASy TrEMBL
Match: I1N7S1_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 498.819 bits (1283), Expect = 4.781e-168 Identity = 243/302 (80.46%), Postives = 273/302 (90.40%), Query Frame = 1 Query: 145 MESMNSFWQLGDDLRGQSKASEDHKWLMVASKLAEQTRIKGERMNNLDLSKGPAEVRTRDKFGFHEDNKFENLNFNMLNLDSKIGDSISKSTFRNGIYNTDAVYQKNNSHNIGNLSANKYSGNNHCNKDIXXXXXXXXXXXXXXXXXXXXDKRFKTLPATETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIRIRKVCKALEEDAFRPVLHHYDGPKFRLELSVPETLDLMDLCEQAGS 1050 ME+M SFWQLGD+LRG SKASEDHKWLMVASKLAEQTR+KGER+NNLDLSKGP E R+RDKFGF E+NKF++LN +MLNLDSK +++SKS+ RNG+Y +AVYQKNN++ + N+ +NKY+G+ NK+ NN+ N+ N +N NA DKRFKTLPA ETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIR+RK+CKALEED+FRPVLHHYDGPKFRLELSVPETLDL+DLCEQAGS Sbjct: 1 MENMQSFWQLGDELRGHSKASEDHKWLMVASKLAEQTRLKGERVNNLDLSKGPIETRSRDKFGFQEENKFDSLNLSMLNLDSKFTENVSKSSLRNGVYGMNAVYQKNNANLVSNVISNKYNGSIQHNKE-INNNTGNNINTNESNNTNATDKRFKTLPAAETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIRVRKLCKALEEDSFRPVLHHYDGPKFRLELSVPETLDLLDLCEQAGS 301
BLAST of g.raimondii_cottongen_reftransV1_0001237 vs. ExPASy TrEMBL
Match: A0A0B2S6W5_GLYSO (B2 protein OS=Glycine soja GN=glysoja_039367 PE=4 SV=1) HSP 1 Score: 498.819 bits (1283), Expect = 4.781e-168 Identity = 243/302 (80.46%), Postives = 273/302 (90.40%), Query Frame = 1 Query: 145 MESMNSFWQLGDDLRGQSKASEDHKWLMVASKLAEQTRIKGERMNNLDLSKGPAEVRTRDKFGFHEDNKFENLNFNMLNLDSKIGDSISKSTFRNGIYNTDAVYQKNNSHNIGNLSANKYSGNNHCNKDIXXXXXXXXXXXXXXXXXXXXDKRFKTLPATETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIRIRKVCKALEEDAFRPVLHHYDGPKFRLELSVPETLDLMDLCEQAGS 1050 ME+M SFWQLGD+LRG SKASEDHKWLMVASKLAEQTR+KGER+NNLDLSKGP E R+RDKFGF E+NKF++LN +MLNLDSK +++SKS+ RNG+Y +AVYQKNN++ + N+ +NKY+G+ NK+ NN+ N+ N +N NA DKRFKTLPA ETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIR+RK+CKALEED+FRPVLHHYDGPKFRLELSVPETLDL+DLCEQAGS Sbjct: 1 MENMQSFWQLGDELRGHSKASEDHKWLMVASKLAEQTRLKGERVNNLDLSKGPIETRSRDKFGFQEENKFDSLNLSMLNLDSKFTENVSKSSLRNGVYGMNAVYQKNNANLVSNVISNKYNGSIQHNKE-INNNTGNNINTNESNNTNATDKRFKTLPAAETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIRVRKLCKALEEDSFRPVLHHYDGPKFRLELSVPETLDLLDLCEQAGS 301
BLAST of g.raimondii_cottongen_reftransV1_0001237 vs. ExPASy TrEMBL
Match: V7CWJ0_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G093700g PE=4 SV=1) HSP 1 Score: 496.508 bits (1277), Expect = 3.721e-167 Identity = 242/302 (80.13%), Postives = 276/302 (91.39%), Query Frame = 1 Query: 145 MESMNSFWQLGDDLRGQSKASEDHKWLMVASKLAEQTRIKGERMNNLDLSKGPAEVRTRDKFGFHEDNKFENLNFNMLNLDSKIGDSISKSTFRNGIYNTDAVYQKNNSHNIGNLSANKYSGNNHCNKDIXXXXXXXXXXXXXXXXXXXXDKRFKTLPATETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIRIRKVCKALEEDAFRPVLHHYDGPKFRLELSVPETLDLMDLCEQAGS 1050 ME+M SFW LGD+LRG SKASEDHKWLMVASKLAEQTR+KGER+NNLDLSKGP E R+RDKFGF E+NKF++LN +MLNLDSK +++SKS+ RN +Y+ +AVYQKNN++ + N+++NKYSGN NK +N+N+ ++NN +N +NA DKRFKTLPA ETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIR+RK+CKALEED+FRPVLHHYDGPKFRLELSVPETLDL+DLC+QAGS Sbjct: 1 MENMQSFWHLGDELRGHSKASEDHKWLMVASKLAEQTRLKGERVNNLDLSKGPIETRSRDKFGFQEENKFDSLNLSMLNLDSKFTENVSKSSLRNSVYSMNAVYQKNNANLMSNVNSNKYSGNIQHNK--ESNNNSGNSNNGESNNSNATDKRFKTLPAAETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIRVRKLCKALEEDSFRPVLHHYDGPKFRLELSVPETLDLLDLCDQAGS 300
BLAST of g.raimondii_cottongen_reftransV1_0001237 vs. ExPASy Swiss-Prot
Match: B2_DAUCA (B2 protein OS=Daucus carota PE=2 SV=1) HSP 1 Score: 274.633 bits (701), Expect = 6.041e-85 Identity = 120/150 (80.00%), Postives = 139/150 (92.67%), Query Frame = 1 Query: 595 DKRFKTLPATETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIRIRKVCKALEEDAFRPVLHHYDGPKFRLELSVPETLDLMDLCEQA 1044 +KRFKTLP E+LPRNE +GGYIFVCNNDTMQE+LKRQLFGLPPRYRDSVRAITPGLPLFLYNY+THQLHG+FEAASFGG+NIDPTAWEDKK +GESRFPAQVR+ RK+C+ LEED+FRP+LHHYDGPKFRLEL++PE + L+D+ E+ Sbjct: 56 EKRFKTLPPAESLPRNETVGGYIFVCNNDTMQENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGVFEAASFGGTNIDPTAWEDKKNQGESRFPAQVRVMTRKICEPLEEDSFRPILHHYDGPKFRLELNIPEAISLLDIFEET 205
BLAST of g.raimondii_cottongen_reftransV1_0001237 vs. ExPASy Swiss-Prot
Match: SUS1_ARATH (Transcription and mRNA export factor SUS1 OS=Arabidopsis thaliana GN=SUS1 PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 2.643e-36 Identity = 79/117 (67.52%), Postives = 99/117 (84.62%), Query Frame = -3 Query: 1885 MKHSVNRPPTPDGAED------QGNEPTLQEIINIKLIESGXXXXXXXXXXXXLIECGWKDEMKALCRSYVKKKGRNNVTLDDLVHLITPKGRASVPDFVKAELLQRIRSFLMSAAL 2217 MKHSVNRPPTPD ED + ++ TL+EIIN+KL+ESGEKE LMEL+R+RL+ECGWKDEM+ CR +VKKKGR +VT+D+L+ +ITPKGRASVPD VKAELL RI++F++SAAL Sbjct: 1 MKHSVNRPPTPD--EDDVADGFEKDKVTLREIINVKLVESGEKENLMELVRDRLVECGWKDEMRIACREHVKKKGRKDVTVDELIRVITPKGRASVPDSVKAELLNRIQNFIVSAAL 115
BLAST of g.raimondii_cottongen_reftransV1_0001237 vs. ExPASy Swiss-Prot
Match: ENY2_TAEGU (Transcription and mRNA export factor ENY2 OS=Taeniopygia guttata GN=ENY2 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 5.590e-22 Identity = 57/93 (61.29%), Postives = 71/93 (76.34%), Query Frame = -3 Query: 1888 GNEPTLQEIINIKLIESGXXXXXXXXXXXXLIECGWKDEMKALCRSYVKKKGRNNVTLDDLVHLITPKGRASVPDFVKAELLQRIRSFLMSAA 2166 + ++ IN KLIE+GE+ERL ELLR +LIECGWKD++KA C+ +K+KG +VT+DDLV ITPKGRA VPD VK ELLQRIR+FL A Sbjct: 2 NKDAQMRATINQKLIETGERERLKELLRAKLIECGWKDQLKAHCKDVIKEKGLEHVTVDDLVAEITPKGRALVPDSVKKELLQRIRTFLAQHA 94
BLAST of g.raimondii_cottongen_reftransV1_0001237 vs. ExPASy Swiss-Prot
Match: ENY2_MOUSE (Transcription and mRNA export factor ENY2 OS=Mus musculus GN=Eny2 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 6.101e-22 Identity = 57/93 (61.29%), Postives = 71/93 (76.34%), Query Frame = -3 Query: 1888 GNEPTLQEIINIKLIESGXXXXXXXXXXXXLIECGWKDEMKALCRSYVKKKGRNNVTLDDLVHLITPKGRASVPDFVKAELLQRIRSFLMSAA 2166 + ++ IN KLIE+GE+ERL ELLR +LIECGWKD++KA C+ +K+KG +VT+DDLV ITPKGRA VPD VK ELLQRIR+FL A Sbjct: 7 NKDAQMRAAINQKLIETGERERLKELLRAKLIECGWKDQLKAHCKEVIKEKGLEHVTVDDLVAEITPKGRALVPDSVKKELLQRIRTFLAQHA 99
BLAST of g.raimondii_cottongen_reftransV1_0001237 vs. ExPASy Swiss-Prot
Match: ENY2_HUMAN (Transcription and mRNA export factor ENY2 OS=Homo sapiens GN=ENY2 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 6.101e-22 Identity = 57/93 (61.29%), Postives = 71/93 (76.34%), Query Frame = -3 Query: 1888 GNEPTLQEIINIKLIESGXXXXXXXXXXXXLIECGWKDEMKALCRSYVKKKGRNNVTLDDLVHLITPKGRASVPDFVKAELLQRIRSFLMSAA 2166 + ++ IN KLIE+GE+ERL ELLR +LIECGWKD++KA C+ +K+KG +VT+DDLV ITPKGRA VPD VK ELLQRIR+FL A Sbjct: 7 NKDAQMRAAINQKLIETGERERLKELLRAKLIECGWKDQLKAHCKEVIKEKGLEHVTVDDLVAEITPKGRALVPDSVKKELLQRIRTFLAQHA 99
BLAST of g.raimondii_cottongen_reftransV1_0001237 vs. ExPASy Swiss-Prot
Match: ENY2_BOVIN (Transcription and mRNA export factor ENY2 OS=Bos taurus GN=ENY2 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 6.101e-22 Identity = 57/93 (61.29%), Postives = 71/93 (76.34%), Query Frame = -3 Query: 1888 GNEPTLQEIINIKLIESGXXXXXXXXXXXXLIECGWKDEMKALCRSYVKKKGRNNVTLDDLVHLITPKGRASVPDFVKAELLQRIRSFLMSAA 2166 + ++ IN KLIE+GE+ERL ELLR +LIECGWKD++KA C+ +K+KG +VT+DDLV ITPKGRA VPD VK ELLQRIR+FL A Sbjct: 7 NKDAQMRAAINQKLIETGERERLKELLRAKLIECGWKDQLKAHCKEVIKEKGLEHVTVDDLVAEITPKGRALVPDSVKKELLQRIRTFLAQHA 99
BLAST of g.raimondii_cottongen_reftransV1_0001237 vs. ExPASy Swiss-Prot
Match: ENY2_DANRE (Transcription and mRNA export factor ENY2 OS=Danio rerio GN=eny2 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 9.302e-22 Identity = 56/89 (62.92%), Postives = 70/89 (78.65%), Query Frame = -3 Query: 1900 GNEPTLQEIINIKLIESGXXXXXXXXXXXXLIECGWKDEMKALCRSYVKKKGRNNVTLDDLVHLITPKGRASVPDFVKAELLQRIRSFL 2166 E ++ IN KLIE GE+ERL ELLR +LIECGW+D++KALC+ +K+KG NVT++DLV +TPKGRA VPD VK ELLQRIR+FL Sbjct: 2 SKESQMRAAINQKLIEMGERERLKELLRAKLIECGWRDQLKALCKEVIKEKGIENVTVEDLVAGVTPKGRALVPDSVKKELLQRIRAFL 90
BLAST of g.raimondii_cottongen_reftransV1_0001237 vs. ExPASy Swiss-Prot
Match: ENY2_XENLA (Transcription and mRNA export factor ENY2 OS=Xenopus laevis GN=eny2 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.400e-21 Identity = 55/91 (60.44%), Postives = 71/91 (78.02%), Query Frame = -3 Query: 1888 EPTLQEIINIKLIESGXXXXXXXXXXXXLIECGWKDEMKALCRSYVKKKGRNNVTLDDLVHLITPKGRASVPDFVKAELLQRIRSFLMSAA 2160 + ++ +IN KLIE+GE+ERL ELLR +LIECGW+D++KA C+ + +KG +VT+DDLV ITPKGRA VPD VK ELLQRIR+FL A Sbjct: 4 DAQMKAVINQKLIETGERERLKELLRAKLIECGWRDQLKAHCKDVINEKGVEHVTVDDLVAEITPKGRALVPDSVKKELLQRIRAFLAQHA 94
BLAST of g.raimondii_cottongen_reftransV1_0001237 vs. ExPASy Swiss-Prot
Match: ENY2_XENTR (Transcription and mRNA export factor ENY2 OS=Xenopus tropicalis GN=eny2 PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 8.155e-21 Identity = 55/91 (60.44%), Postives = 70/91 (76.92%), Query Frame = -3 Query: 1888 EPTLQEIINIKLIESGXXXXXXXXXXXXLIECGWKDEMKALCRSYVKKKGRNNVTLDDLVHLITPKGRASVPDFVKAELLQRIRSFLMSAA 2160 + ++ IN KLIE+GE+ERL ELLR +LIECGW+D++KA C+ + +KG +VT+DDLV ITPKGRA VPD VK ELLQRIR+FL A Sbjct: 4 DAQMKAAINQKLIETGERERLKELLRAKLIECGWRDQLKAHCKDVINEKGVEHVTVDDLVAEITPKGRALVPDSVKKELLQRIRAFLAQHA 94
BLAST of g.raimondii_cottongen_reftransV1_0001237 vs. ExPASy Swiss-Prot
Match: ENY2A_SALSA (Transcription and mRNA export factor ENY2-1 OS=Salmo salar GN=eny2-1 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.275e-18 Identity = 52/93 (55.91%), Postives = 67/93 (72.04%), Query Frame = -3 Query: 1888 GNEPTLQEIINIKLIESGXXXXXXXXXXXXLIECGWKDEMKALCRSYVKKKGRNNVTLDDLVHLITPKGRASVPDFVKAELLQRIRSFLMSAA 2166 + ++ IN KL E GE+ERL ELLR +L ECGW+D++KALC+ +K+KG + T++DLV ITPKGR VPD VK ELLQRIR+FL A Sbjct: 2 SKDSKMRATINQKLTEMGERERLKELLRAKLTECGWRDQLKALCKDVIKEKGLEHATVEDLVVEITPKGRVLVPDSVKRELLQRIRAFLAQHA 94 The following BLAST results are available for this feature:
BLAST of g.raimondii_cottongen_reftransV1_0001237 vs. ExPASy TrEMBL
Analysis Date: 2016-11-09 (Homology Analysis for Gossypium raimondii CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.raimondii_cottongen_reftransV1_0001237 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-09 (Homology Analysis for Gossypium raimondii CottonGen RefTrans V1 vs SwissProt) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium raimondii CottonGen RefTrans V1
Date Performed: 2016-11-09
Sequences
The
following sequences are available for this feature:
contig sequence >g.raimondii_cottongen_reftransV1_0001237 ID=g.raimondii_cottongen_reftransV1_0001237; Name=g.raimondii_cottongen_reftransV1_0001237; organism=Gossypium raimondii; type=contig; length=2285bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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