g.raimondii_cottongen_reftransV1_0001187, g.raimondii_cottongen_reftransV1_0001187 (contig) Gossypium raimondii
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.raimondii_cottongen_reftransV1_0001187 vs. ExPASy TrEMBL
Match: A0A061DM92_THECC (P-loop containing nucleoside triphosphate hydrolases superfamily protein OS=Theobroma cacao GN=TCM_046690 PE=4 SV=1) HSP 1 Score: 432.95 bits (1112), Expect = 4.683e-141 Identity = 246/464 (53.02%), Postives = 297/464 (64.01%), Query Frame = 3 Query: 45 MGGETIIPPTFTSEEEYSVDQDFXXXXXXXXXXXXXRYSFFPPLF*RMK*VLAYIIFLGSSEKC*I*LCGFI*ARDYLRMKAEDGK-NESDRLFLEEFDKMGP-QSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVFEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIPGDFIKLFTFSAL*FIDYFLPSHYLCN*V*TFKFAENHDPVTELTIVDMLRYSLEHADRNLPYKNWVMENVCLAPIIMAKMFCMAV 1430 MGG I PP T EE+ S+DQD+S PSL S FP +K EDG+ ++ +R+ E D++GP +SS + EA +RR+ Y EV QSYD LRV SK L+EAK K+LSY PG WI+NVG SDYDVPKTT+LLL+GPKGCGKSSL+NKISR+FEDD FA ERAQ+SYNPSVGDGTY+LQ YMIPRGS SFCLYD+R L+D SENI+MI+ WM GVRHGE +IR+SD S LR +MK K +E + + + VNFVIFVV VS LKS+EGD E +Q+I++VF P LSFKDDKPVVV+THGDLLS++DR+R RV+LGELLGIPPAKQIFDIP E+ DP+TELTIV+MLRYSLEHADRNLP KNWV++ A+ FC V Sbjct: 1 MGGHQINPPIPTPEEKSSMDQDYSNPSLPSQPFN------FP------------------------------------SVKVEDGRVSQDNRVISGELDQVGPFSTSSLEIEANQRRRRNTYSEVFQSYDPLRVHSKILDEAKSKILSYVPGAWIDNVG----SDYDVPKTTTLLLVGPKGCGKSSLINKISRIFEDDKFASERAQVSYNPSVGDGTYFLQEYMIPRGSTSFCLYDTRSLSDAKSENIDMIKCWMTKGVRHGELIIRESDGSRLRSRMKCKTQEDNCQSTEMRKVNFVIFVVHGVSFLKSMEGDDNEGKQYIQLITKVFNCPHLSFKDDKPVVVVTHGDLLSLSDRLRIRVHLGELLGIPPAKQIFDIP----------------------------------ESCDPITELTIVEMLRYSLEHADRNLPRKNWVLDR-------GAQSFCTCV 377
BLAST of g.raimondii_cottongen_reftransV1_0001187 vs. ExPASy TrEMBL
Match: A0A067LA16_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15156 PE=4 SV=1) HSP 1 Score: 397.127 bits (1019), Expect = 1.689e-127 Identity = 227/464 (48.92%), Postives = 286/464 (61.64%), Query Frame = 3 Query: 45 MGGETIIPPTFTSEEEYSVDQDFXXXXXXXXXXXXXRYSFFPPLF*RMK*VLAYIIFLGSSEKC*I*LCGFI*ARDYLRMKAEDGK-NESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVFEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIPGDFIKLFTFSAL*FIDYFLPSHYLCN*V*TFKFAENHDPVTELTIVDMLRYSLEHADRNLPYKNWVMENVCLAPIIMAKMFCMAVF 1433 MGG++I T T EEE+S++QD PL SS + +RD + ED NE L F+++ SSS +FEA ++R Y EV QSY QL+ R+K L EAK K+LSY PG WIE GG +SDY+VPKTT+LLL+GPKG GKSSL+N+IS+VFEDD FAPERAQ+SYN S +GTY+LQ YMIPRGSASFCLYDSRGL+D SEN+ M++ W+ GVRHGE +IR SD SSL+ ++K K R + +MVNFVIFVV+ ++VLKS+E +G E L QMI++ F P LSFKDDKP VV+TH DLLS++DR R RV+LG LLGIPPAKQIFDIP F PVTELTIVDMLRYSLEHA++NLP K+W+ E V + ++ + C+ +F Sbjct: 1 MGGDSITSLTSTPEEEFSMNQDV-----------------LRPL---------------SSNN------PYYHSRDDISGNFEDKTFNEDYELVFGGFEQIS--SSSLEFEANIRKRCNAYNEVFQSYHQLQSRTKGLEEAKRKILSYTPGEWIEKAGG--MSDYNVPKTTTLLLVGPKGSGKSSLINRISKVFEDDKFAPERAQVSYNSSAVEGTYFLQEYMIPRGSASFCLYDSRGLSDDFSENVEMLKQWITKGVRHGELIIRPSDHSSLKTRIKCKVRGNGSQSSETRMVNFVIFVVNGLAVLKSMESEGDEGSLYWQMIAKTFNCPYLSFKDDKPAVVVTHSDLLSLSDRARIRVWLGNLLGIPPAKQIFDIPESFY----------------------------------PVTELTIVDMLRYSLEHAEKNLPRKDWLAEKV--RGVKVSLLTCIYLF 386
BLAST of g.raimondii_cottongen_reftransV1_0001187 vs. ExPASy TrEMBL
Match: V4VU86_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020463mg PE=4 SV=1) HSP 1 Score: 385.185 bits (988), Expect = 8.814e-124 Identity = 204/360 (56.67%), Postives = 243/360 (67.50%), Query Frame = 3 Query: 381 HKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVFEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQM---VNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIPGDFIKLFTFSAL*FIDYFLPSHYLCN*V*TFKFAENHDPVTELTIVDMLRYSLEHADRNLPYKNWVMENVCLAPIIMAKMFCMAVFSFTLIC 1451 +RR V++EVLQSYDQLR R SL +AK K+LSY PG WIENVGG LSDYDVPKTTSLLLIGPKG GKSSLVN+IS+VFE+D FA ERAQ++YN SVGDGTY+LQ Y IPRGS SF LYD+R L+D S+NINMI+ W+ GVRHGE VIR+SD SSLR +M+ K R++ C P + VNFVIFVVD ++VLKS+EGD + Q+++ F P LSF+DDKPVVV+THGDLLS+ DR R R YLGELLGIPPAKQIFDIP E+ DP EL I+DMLRY LEHADRNL K+ N +MA + + V +I Sbjct: 19 QRRRDAVFREVLQSYDQLRTRIGSLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIPRGSNSFSLYDTRSLSDDASDNINMIKLWIMEGVRHGELVIRRSDSSSLRNRMRCKARKIG---CDPSVIRKVNFVIFVVDGLAVLKSMEGDSDVEKQYDQIVATTFNCPYLSFRDDKPVVVVTHGDLLSLTDRARIRTYLGELLGIPPAKQIFDIP----------------------------------ESSDPENELIIIDMLRYCLEHADRNLSCKS-CARNKGFRVSVMAFLNLLLVLGIAIIA 340
BLAST of g.raimondii_cottongen_reftransV1_0001187 vs. ExPASy TrEMBL
Match: A0A067FF17_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g015952mg PE=4 SV=1) HSP 1 Score: 383.259 bits (983), Expect = 2.507e-123 Identity = 200/338 (59.17%), Postives = 234/338 (69.23%), Query Frame = 3 Query: 381 HKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVFEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQM---VNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIPGDFIKLFTFSAL*FIDYFLPSHYLCN*V*TFKFAENHDPVTELTIVDMLRYSLEHADRNLPYKNWVMENV 1385 +RR V++EVLQSYDQLR R SL +AK K+LSY PG WIENVGG LSDYDVPKTTSLLLIGPKG GKSSLVN+IS+VFE+D FA ERAQ++YN SVGDGTY+LQ Y IPRGS SF LYD+R L+D S+NINMI+ W+ GVRHGE VIR+SD SSLR +M+ K ++ C P + VNFVIFVVD ++VLKS+EGD + Q+++ F P LSF+DDKPVVV+THGDLLS+ DR R R YLGELLGIPPAKQIFDIP E+ DP EL IVDMLRY LEHADRNL K+ V Sbjct: 47 QRRRDAVFREVLQSYDQLRTRIGSLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIPRGSNSFSLYDTRSLSDDASDNINMIKLWIMEGVRHGELVIRRSDSSSLRNRMRCKAHKIG---CEPSVIRKVNFVIFVVDGLAVLKSMEGDSDVEKQYNQIVATTFNCPYLSFRDDKPVVVVTHGDLLSLTDRARIRTYLGELLGIPPAKQIFDIP----------------------------------ESSDPENELIIVDMLRYCLEHADRNLSCKSCARNKV 347
BLAST of g.raimondii_cottongen_reftransV1_0001187 vs. ExPASy TrEMBL
Match: A0A067FIL8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g015952mg PE=4 SV=1) HSP 1 Score: 383.259 bits (983), Expect = 2.628e-123 Identity = 200/338 (59.17%), Postives = 234/338 (69.23%), Query Frame = 3 Query: 381 HKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVFEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQM---VNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIPGDFIKLFTFSAL*FIDYFLPSHYLCN*V*TFKFAENHDPVTELTIVDMLRYSLEHADRNLPYKNWVMENV 1385 +RR V++EVLQSYDQLR R SL +AK K+LSY PG WIENVGG LSDYDVPKTTSLLLIGPKG GKSSLVN+IS+VFE+D FA ERAQ++YN SVGDGTY+LQ Y IPRGS SF LYD+R L+D S+NINMI+ W+ GVRHGE VIR+SD SSLR +M+ K ++ C P + VNFVIFVVD ++VLKS+EGD + Q+++ F P LSF+DDKPVVV+THGDLLS+ DR R R YLGELLGIPPAKQIFDIP E+ DP EL IVDMLRY LEHADRNL K+ V Sbjct: 50 QRRRDAVFREVLQSYDQLRTRIGSLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIPRGSNSFSLYDTRSLSDDASDNINMIKLWIMEGVRHGELVIRRSDSSSLRNRMRCKAHKIG---CEPSVIRKVNFVIFVVDGLAVLKSMEGDSDVEKQYNQIVATTFNCPYLSFRDDKPVVVVTHGDLLSLTDRARIRTYLGELLGIPPAKQIFDIP----------------------------------ESSDPENELIIVDMLRYCLEHADRNLSCKSCARNKV 350
BLAST of g.raimondii_cottongen_reftransV1_0001187 vs. ExPASy TrEMBL
Match: V4T926_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020463mg PE=4 SV=1) HSP 1 Score: 385.185 bits (988), Expect = 2.757e-123 Identity = 210/381 (55.12%), Postives = 250/381 (65.62%), Query Frame = 3 Query: 318 LFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVFEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQM---VNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIPGDFIKLFTFSAL*FIDYFLPSHYLCN*V*TFKFAENHDPVTELTIVDMLRYSLEHADRNLPYKNWVMENVCLAPIIMAKMFCMAVFSFTLIC 1451 L + D G Q S D +RR V++EVLQSYDQLR R SL +AK K+LSY PG WIENVGG LSDYDVPKTTSLLLIGPKG GKSSLVN+IS+VFE+D FA ERAQ++YN SVGDGTY+LQ Y IPRGS SF LYD+R L+D S+NINMI+ W+ GVRHGE VIR+SD SSLR +M+ K R++ C P + VNFVIFVVD ++VLKS+EGD + Q+++ F P LSF+DDKPVVV+THGDLLS+ DR R R YLGELLGIPPAKQIFDIP E+ DP EL I+DMLRY LEHADRNL K+ N +MA + + V +I Sbjct: 29 LSMNSGDDEGSQDSW-DSLVDQRRRDAVFREVLQSYDQLRTRIGSLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIPRGSNSFSLYDTRSLSDDASDNINMIKLWIMEGVRHGELVIRRSDSSSLRNRMRCKARKIG---CDPSVIRKVNFVIFVVDGLAVLKSMEGDSDVEKQYDQIVATTFNCPYLSFRDDKPVVVVTHGDLLSLTDRARIRTYLGELLGIPPAKQIFDIP----------------------------------ESSDPENELIIIDMLRYCLEHADRNLSCKS-CARNKGFRVSVMAFLNLLLVLGIAIIA 370
BLAST of g.raimondii_cottongen_reftransV1_0001187 vs. ExPASy TrEMBL
Match: V4TYG1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020463mg PE=4 SV=1) HSP 1 Score: 385.185 bits (988), Expect = 3.103e-123 Identity = 210/381 (55.12%), Postives = 250/381 (65.62%), Query Frame = 3 Query: 318 LFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVFEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQM---VNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIPGDFIKLFTFSAL*FIDYFLPSHYLCN*V*TFKFAENHDPVTELTIVDMLRYSLEHADRNLPYKNWVMENVCLAPIIMAKMFCMAVFSFTLIC 1451 L + D G Q S D +RR V++EVLQSYDQLR R SL +AK K+LSY PG WIENVGG LSDYDVPKTTSLLLIGPKG GKSSLVN+IS+VFE+D FA ERAQ++YN SVGDGTY+LQ Y IPRGS SF LYD+R L+D S+NINMI+ W+ GVRHGE VIR+SD SSLR +M+ K R++ C P + VNFVIFVVD ++VLKS+EGD + Q+++ F P LSF+DDKPVVV+THGDLLS+ DR R R YLGELLGIPPAKQIFDIP E+ DP EL I+DMLRY LEHADRNL K+ N +MA + + V +I Sbjct: 30 LSMNSGDDEGSQDSW-DSLVDQRRRDAVFREVLQSYDQLRTRIGSLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIPRGSNSFSLYDTRSLSDDASDNINMIKLWIMEGVRHGELVIRRSDSSSLRNRMRCKARKIG---CDPSVIRKVNFVIFVVDGLAVLKSMEGDSDVEKQYDQIVATTFNCPYLSFRDDKPVVVVTHGDLLSLTDRARIRTYLGELLGIPPAKQIFDIP----------------------------------ESSDPENELIIIDMLRYCLEHADRNLSCKS-CARNKGFRVSVMAFLNLLLVLGIAIIA 371
BLAST of g.raimondii_cottongen_reftransV1_0001187 vs. ExPASy TrEMBL
Match: A0A067FRA0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g015952mg PE=4 SV=1) HSP 1 Score: 382.874 bits (982), Expect = 3.529e-123 Identity = 200/338 (59.17%), Postives = 234/338 (69.23%), Query Frame = 3 Query: 381 HKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVFEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQM---VNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIPGDFIKLFTFSAL*FIDYFLPSHYLCN*V*TFKFAENHDPVTELTIVDMLRYSLEHADRNLPYKNWVMENV 1385 +RR V++EVLQSYDQLR R SL +AK K+LSY PG WIENVGG LSDYDVPKTTSLLLIGPKG GKSSLVN+IS+VFE+D FA ERAQ++YN SVGDGTY+LQ Y IPRGS SF LYD+R L+D S+NINMI+ W+ GVRHGE VIR+SD SSLR +M+ K ++ C P + VNFVIFVVD ++VLKS+EGD + Q+++ F P LSF+DDKPVVV+THGDLLS+ DR R R YLGELLGIPPAKQIFDIP E+ DP EL IVDMLRY LEHADRNL K+ V Sbjct: 46 QRRRDAVFREVLQSYDQLRTRIGSLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIPRGSNSFSLYDTRSLSDDASDNINMIKLWIMEGVRHGELVIRRSDSSSLRNRMRCKAHKIG---CEPSVIRKVNFVIFVVDGLAVLKSMEGDSDVEKQYNQIVATTFNCPYLSFRDDKPVVVVTHGDLLSLTDRARIRTYLGELLGIPPAKQIFDIP----------------------------------ESSDPENELIIVDMLRYCLEHADRNLSCKSCARNKV 346
BLAST of g.raimondii_cottongen_reftransV1_0001187 vs. ExPASy TrEMBL
Match: V4U3P8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020463mg PE=4 SV=1) HSP 1 Score: 384.415 bits (986), Expect = 4.319e-123 Identity = 204/360 (56.67%), Postives = 243/360 (67.50%), Query Frame = 3 Query: 381 HKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVFEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQM---VNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIPGDFIKLFTFSAL*FIDYFLPSHYLCN*V*TFKFAENHDPVTELTIVDMLRYSLEHADRNLPYKNWVMENVCLAPIIMAKMFCMAVFSFTLIC 1451 +RR V++EVLQSYDQLR R SL +AK K+LSY PG WIENVGG LSDYDVPKTTSLLLIGPKG GKSSLVN+IS+VFE+D FA ERAQ++YN SVGDGTY+LQ Y IPRGS SF LYD+R L+D S+NINMI+ W+ GVRHGE VIR+SD SSLR +M+ K R++ C P + VNFVIFVVD ++VLKS+EGD + Q+++ F P LSF+DDKPVVV+THGDLLS+ DR R R YLGELLGIPPAKQIFDIP E+ DP EL I+DMLRY LEHADRNL K+ N +MA + + V +I Sbjct: 47 QRRRDAVFREVLQSYDQLRTRIGSLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIPRGSNSFSLYDTRSLSDDASDNINMIKLWIMEGVRHGELVIRRSDSSSLRNRMRCKARKIG---CDPSVIRKVNFVIFVVDGLAVLKSMEGDSDVEKQYDQIVATTFNCPYLSFRDDKPVVVVTHGDLLSLTDRARIRTYLGELLGIPPAKQIFDIP----------------------------------ESSDPENELIIIDMLRYCLEHADRNLSCKS-CARNKGFRVSVMAFLNLLLVLGIAIIA 368
BLAST of g.raimondii_cottongen_reftransV1_0001187 vs. ExPASy TrEMBL
Match: A0A067FS24_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g015952mg PE=4 SV=1) HSP 1 Score: 382.874 bits (982), Expect = 6.285e-123 Identity = 200/338 (59.17%), Postives = 234/338 (69.23%), Query Frame = 3 Query: 381 HKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVFEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQM---VNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIPGDFIKLFTFSAL*FIDYFLPSHYLCN*V*TFKFAENHDPVTELTIVDMLRYSLEHADRNLPYKNWVMENV 1385 +RR V++EVLQSYDQLR R SL +AK K+LSY PG WIENVGG LSDYDVPKTTSLLLIGPKG GKSSLVN+IS+VFE+D FA ERAQ++YN SVGDGTY+LQ Y IPRGS SF LYD+R L+D S+NINMI+ W+ GVRHGE VIR+SD SSLR +M+ K ++ C P + VNFVIFVVD ++VLKS+EGD + Q+++ F P LSF+DDKPVVV+THGDLLS+ DR R R YLGELLGIPPAKQIFDIP E+ DP EL IVDMLRY LEHADRNL K+ V Sbjct: 61 QRRRDAVFREVLQSYDQLRTRIGSLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIPRGSNSFSLYDTRSLSDDASDNINMIKLWIMEGVRHGELVIRRSDSSSLRNRMRCKAHKIG---CEPSVIRKVNFVIFVVDGLAVLKSMEGDSDVEKQYNQIVATTFNCPYLSFRDDKPVVVVTHGDLLSLTDRARIRTYLGELLGIPPAKQIFDIP----------------------------------ESSDPENELIIVDMLRYCLEHADRNLSCKSCARNKV 361 The following BLAST results are available for this feature:
BLAST of g.raimondii_cottongen_reftransV1_0001187 vs. ExPASy TrEMBL
Analysis Date: 2016-11-09 (Homology Analysis for Gossypium raimondii CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.raimondii_cottongen_reftransV1_0001187 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-09 (Homology Analysis for Gossypium raimondii CottonGen RefTrans V1 vs SwissProt) Total hits: 0
InterPro
Analysis Name: InterProScan analysis for Gossypium raimondii CottonGen RefTrans V1
Date Performed: 2016-11-09
Sequences
The
following sequences are available for this feature:
contig sequence >g.raimondii_cottongen_reftransV1_0001187 ID=g.raimondii_cottongen_reftransV1_0001187; Name=g.raimondii_cottongen_reftransV1_0001187; organism=Gossypium raimondii; type=contig; length=2100bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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