g.raimondii_cottongen_reftransV1_0001187, g.raimondii_cottongen_reftransV1_0001187 (contig) Gossypium raimondii

Overview
Nameg.raimondii_cottongen_reftransV1_0001187
Unique Nameg.raimondii_cottongen_reftransV1_0001187
Typecontig
OrganismGossypium raimondii (Gossypium raimondii)
Sequence length2100
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr07chromosomeg.raimondii_cottongen_reftransV1_0001187:1..2100 .
Chr07:13603695..13606791 -
n/a
Homology
BLAST of g.raimondii_cottongen_reftransV1_0001187 vs. ExPASy TrEMBL
Match: A0A061DM92_THECC (P-loop containing nucleoside triphosphate hydrolases superfamily protein OS=Theobroma cacao GN=TCM_046690 PE=4 SV=1)

HSP 1 Score: 432.95 bits (1112), Expect = 4.683e-141
Identity = 246/464 (53.02%), Postives = 297/464 (64.01%), Query Frame = 3
Query:   45 MGGETIIPPTFTSEEEYSVDQDFXXXXXXXXXXXXXRYSFFPPLF*RMK*VLAYIIFLGSSEKC*I*LCGFI*ARDYLRMKAEDGK-NESDRLFLEEFDKMGP-QSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVFEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIPGDFIKLFTFSAL*FIDYFLPSHYLCN*V*TFKFAENHDPVTELTIVDMLRYSLEHADRNLPYKNWVMENVCLAPIIMAKMFCMAV 1430
            MGG  I PP  T EE+ S+DQD+S PSL S          FP                                     +K EDG+ ++ +R+   E D++GP  +SS + EA  +RR+  Y EV QSYD LRV SK L+EAK K+LSY PG WI+NVG    SDYDVPKTT+LLL+GPKGCGKSSL+NKISR+FEDD FA ERAQ+SYNPSVGDGTY+LQ YMIPRGS SFCLYD+R L+D  SENI+MI+ WM  GVRHGE +IR+SD S LR +MK K +E + +    + VNFVIFVV  VS LKS+EGD  E    +Q+I++VF  P LSFKDDKPVVV+THGDLLS++DR+R RV+LGELLGIPPAKQIFDIP                                  E+ DP+TELTIV+MLRYSLEHADRNLP KNWV++         A+ FC  V
Sbjct:    1 MGGHQINPPIPTPEEKSSMDQDYSNPSLPSQPFN------FP------------------------------------SVKVEDGRVSQDNRVISGELDQVGPFSTSSLEIEANQRRRRNTYSEVFQSYDPLRVHSKILDEAKSKILSYVPGAWIDNVG----SDYDVPKTTTLLLVGPKGCGKSSLINKISRIFEDDKFASERAQVSYNPSVGDGTYFLQEYMIPRGSTSFCLYDTRSLSDAKSENIDMIKCWMTKGVRHGELIIRESDGSRLRSRMKCKTQEDNCQSTEMRKVNFVIFVVHGVSFLKSMEGDDNEGKQYIQLITKVFNCPHLSFKDDKPVVVVTHGDLLSLSDRLRIRVHLGELLGIPPAKQIFDIP----------------------------------ESCDPITELTIVEMLRYSLEHADRNLPRKNWVLDR-------GAQSFCTCV 377          
BLAST of g.raimondii_cottongen_reftransV1_0001187 vs. ExPASy TrEMBL
Match: A0A067LA16_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15156 PE=4 SV=1)

HSP 1 Score: 397.127 bits (1019), Expect = 1.689e-127
Identity = 227/464 (48.92%), Postives = 286/464 (61.64%), Query Frame = 3
Query:   45 MGGETIIPPTFTSEEEYSVDQDFXXXXXXXXXXXXXRYSFFPPLF*RMK*VLAYIIFLGSSEKC*I*LCGFI*ARDYLRMKAEDGK-NESDRLFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVFEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQMVNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIPGDFIKLFTFSAL*FIDYFLPSHYLCN*V*TFKFAENHDPVTELTIVDMLRYSLEHADRNLPYKNWVMENVCLAPIIMAKMFCMAVF 1433
            MGG++I   T T EEE+S++QD                    PL               SS         +  +RD +    ED   NE   L    F+++   SSS +FEA  ++R   Y EV QSY QL+ R+K L EAK K+LSY PG WIE  GG  +SDY+VPKTT+LLL+GPKG GKSSL+N+IS+VFEDD FAPERAQ+SYN S  +GTY+LQ YMIPRGSASFCLYDSRGL+D  SEN+ M++ W+  GVRHGE +IR SD SSL+ ++K K R    +    +MVNFVIFVV+ ++VLKS+E +G E  L  QMI++ F  P LSFKDDKP VV+TH DLLS++DR R RV+LG LLGIPPAKQIFDIP  F                                   PVTELTIVDMLRYSLEHA++NLP K+W+ E V    + ++ + C+ +F
Sbjct:    1 MGGDSITSLTSTPEEEFSMNQDV-----------------LRPL---------------SSNN------PYYHSRDDISGNFEDKTFNEDYELVFGGFEQIS--SSSLEFEANIRKRCNAYNEVFQSYHQLQSRTKGLEEAKRKILSYTPGEWIEKAGG--MSDYNVPKTTTLLLVGPKGSGKSSLINRISKVFEDDKFAPERAQVSYNSSAVEGTYFLQEYMIPRGSASFCLYDSRGLSDDFSENVEMLKQWITKGVRHGELIIRPSDHSSLKTRIKCKVRGNGSQSSETRMVNFVIFVVNGLAVLKSMESEGDEGSLYWQMIAKTFNCPYLSFKDDKPAVVVTHSDLLSLSDRARIRVWLGNLLGIPPAKQIFDIPESFY----------------------------------PVTELTIVDMLRYSLEHAEKNLPRKDWLAEKV--RGVKVSLLTCIYLF 386          
BLAST of g.raimondii_cottongen_reftransV1_0001187 vs. ExPASy TrEMBL
Match: V4VU86_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020463mg PE=4 SV=1)

HSP 1 Score: 385.185 bits (988), Expect = 8.814e-124
Identity = 204/360 (56.67%), Postives = 243/360 (67.50%), Query Frame = 3
Query:  381 HKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVFEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQM---VNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIPGDFIKLFTFSAL*FIDYFLPSHYLCN*V*TFKFAENHDPVTELTIVDMLRYSLEHADRNLPYKNWVMENVCLAPIIMAKMFCMAVFSFTLIC 1451
             +RR  V++EVLQSYDQLR R  SL +AK K+LSY PG WIENVGG  LSDYDVPKTTSLLLIGPKG GKSSLVN+IS+VFE+D FA ERAQ++YN SVGDGTY+LQ Y IPRGS SF LYD+R L+D  S+NINMI+ W+  GVRHGE VIR+SD SSLR +M+ K R++    C P +   VNFVIFVVD ++VLKS+EGD   +    Q+++  F  P LSF+DDKPVVV+THGDLLS+ DR R R YLGELLGIPPAKQIFDIP                                  E+ DP  EL I+DMLRY LEHADRNL  K+    N      +MA +  + V    +I 
Sbjct:   19 QRRRDAVFREVLQSYDQLRTRIGSLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIPRGSNSFSLYDTRSLSDDASDNINMIKLWIMEGVRHGELVIRRSDSSSLRNRMRCKARKIG---CDPSVIRKVNFVIFVVDGLAVLKSMEGDSDVEKQYDQIVATTFNCPYLSFRDDKPVVVVTHGDLLSLTDRARIRTYLGELLGIPPAKQIFDIP----------------------------------ESSDPENELIIIDMLRYCLEHADRNLSCKS-CARNKGFRVSVMAFLNLLLVLGIAIIA 340          
BLAST of g.raimondii_cottongen_reftransV1_0001187 vs. ExPASy TrEMBL
Match: A0A067FF17_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g015952mg PE=4 SV=1)

HSP 1 Score: 383.259 bits (983), Expect = 2.507e-123
Identity = 200/338 (59.17%), Postives = 234/338 (69.23%), Query Frame = 3
Query:  381 HKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVFEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQM---VNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIPGDFIKLFTFSAL*FIDYFLPSHYLCN*V*TFKFAENHDPVTELTIVDMLRYSLEHADRNLPYKNWVMENV 1385
             +RR  V++EVLQSYDQLR R  SL +AK K+LSY PG WIENVGG  LSDYDVPKTTSLLLIGPKG GKSSLVN+IS+VFE+D FA ERAQ++YN SVGDGTY+LQ Y IPRGS SF LYD+R L+D  S+NINMI+ W+  GVRHGE VIR+SD SSLR +M+ K  ++    C P +   VNFVIFVVD ++VLKS+EGD   +    Q+++  F  P LSF+DDKPVVV+THGDLLS+ DR R R YLGELLGIPPAKQIFDIP                                  E+ DP  EL IVDMLRY LEHADRNL  K+     V
Sbjct:   47 QRRRDAVFREVLQSYDQLRTRIGSLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIPRGSNSFSLYDTRSLSDDASDNINMIKLWIMEGVRHGELVIRRSDSSSLRNRMRCKAHKIG---CEPSVIRKVNFVIFVVDGLAVLKSMEGDSDVEKQYNQIVATTFNCPYLSFRDDKPVVVVTHGDLLSLTDRARIRTYLGELLGIPPAKQIFDIP----------------------------------ESSDPENELIIVDMLRYCLEHADRNLSCKSCARNKV 347          
BLAST of g.raimondii_cottongen_reftransV1_0001187 vs. ExPASy TrEMBL
Match: A0A067FIL8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g015952mg PE=4 SV=1)

HSP 1 Score: 383.259 bits (983), Expect = 2.628e-123
Identity = 200/338 (59.17%), Postives = 234/338 (69.23%), Query Frame = 3
Query:  381 HKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVFEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQM---VNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIPGDFIKLFTFSAL*FIDYFLPSHYLCN*V*TFKFAENHDPVTELTIVDMLRYSLEHADRNLPYKNWVMENV 1385
             +RR  V++EVLQSYDQLR R  SL +AK K+LSY PG WIENVGG  LSDYDVPKTTSLLLIGPKG GKSSLVN+IS+VFE+D FA ERAQ++YN SVGDGTY+LQ Y IPRGS SF LYD+R L+D  S+NINMI+ W+  GVRHGE VIR+SD SSLR +M+ K  ++    C P +   VNFVIFVVD ++VLKS+EGD   +    Q+++  F  P LSF+DDKPVVV+THGDLLS+ DR R R YLGELLGIPPAKQIFDIP                                  E+ DP  EL IVDMLRY LEHADRNL  K+     V
Sbjct:   50 QRRRDAVFREVLQSYDQLRTRIGSLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIPRGSNSFSLYDTRSLSDDASDNINMIKLWIMEGVRHGELVIRRSDSSSLRNRMRCKAHKIG---CEPSVIRKVNFVIFVVDGLAVLKSMEGDSDVEKQYNQIVATTFNCPYLSFRDDKPVVVVTHGDLLSLTDRARIRTYLGELLGIPPAKQIFDIP----------------------------------ESSDPENELIIVDMLRYCLEHADRNLSCKSCARNKV 350          
BLAST of g.raimondii_cottongen_reftransV1_0001187 vs. ExPASy TrEMBL
Match: V4T926_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020463mg PE=4 SV=1)

HSP 1 Score: 385.185 bits (988), Expect = 2.757e-123
Identity = 210/381 (55.12%), Postives = 250/381 (65.62%), Query Frame = 3
Query:  318 LFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVFEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQM---VNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIPGDFIKLFTFSAL*FIDYFLPSHYLCN*V*TFKFAENHDPVTELTIVDMLRYSLEHADRNLPYKNWVMENVCLAPIIMAKMFCMAVFSFTLIC 1451
            L +   D  G Q S  D     +RR  V++EVLQSYDQLR R  SL +AK K+LSY PG WIENVGG  LSDYDVPKTTSLLLIGPKG GKSSLVN+IS+VFE+D FA ERAQ++YN SVGDGTY+LQ Y IPRGS SF LYD+R L+D  S+NINMI+ W+  GVRHGE VIR+SD SSLR +M+ K R++    C P +   VNFVIFVVD ++VLKS+EGD   +    Q+++  F  P LSF+DDKPVVV+THGDLLS+ DR R R YLGELLGIPPAKQIFDIP                                  E+ DP  EL I+DMLRY LEHADRNL  K+    N      +MA +  + V    +I 
Sbjct:   29 LSMNSGDDEGSQDSW-DSLVDQRRRDAVFREVLQSYDQLRTRIGSLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIPRGSNSFSLYDTRSLSDDASDNINMIKLWIMEGVRHGELVIRRSDSSSLRNRMRCKARKIG---CDPSVIRKVNFVIFVVDGLAVLKSMEGDSDVEKQYDQIVATTFNCPYLSFRDDKPVVVVTHGDLLSLTDRARIRTYLGELLGIPPAKQIFDIP----------------------------------ESSDPENELIIIDMLRYCLEHADRNLSCKS-CARNKGFRVSVMAFLNLLLVLGIAIIA 370          
BLAST of g.raimondii_cottongen_reftransV1_0001187 vs. ExPASy TrEMBL
Match: V4TYG1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020463mg PE=4 SV=1)

HSP 1 Score: 385.185 bits (988), Expect = 3.103e-123
Identity = 210/381 (55.12%), Postives = 250/381 (65.62%), Query Frame = 3
Query:  318 LFLEEFDKMGPQSSSPDFEAYHKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVFEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQM---VNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIPGDFIKLFTFSAL*FIDYFLPSHYLCN*V*TFKFAENHDPVTELTIVDMLRYSLEHADRNLPYKNWVMENVCLAPIIMAKMFCMAVFSFTLIC 1451
            L +   D  G Q S  D     +RR  V++EVLQSYDQLR R  SL +AK K+LSY PG WIENVGG  LSDYDVPKTTSLLLIGPKG GKSSLVN+IS+VFE+D FA ERAQ++YN SVGDGTY+LQ Y IPRGS SF LYD+R L+D  S+NINMI+ W+  GVRHGE VIR+SD SSLR +M+ K R++    C P +   VNFVIFVVD ++VLKS+EGD   +    Q+++  F  P LSF+DDKPVVV+THGDLLS+ DR R R YLGELLGIPPAKQIFDIP                                  E+ DP  EL I+DMLRY LEHADRNL  K+    N      +MA +  + V    +I 
Sbjct:   30 LSMNSGDDEGSQDSW-DSLVDQRRRDAVFREVLQSYDQLRTRIGSLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIPRGSNSFSLYDTRSLSDDASDNINMIKLWIMEGVRHGELVIRRSDSSSLRNRMRCKARKIG---CDPSVIRKVNFVIFVVDGLAVLKSMEGDSDVEKQYDQIVATTFNCPYLSFRDDKPVVVVTHGDLLSLTDRARIRTYLGELLGIPPAKQIFDIP----------------------------------ESSDPENELIIIDMLRYCLEHADRNLSCKS-CARNKGFRVSVMAFLNLLLVLGIAIIA 371          
BLAST of g.raimondii_cottongen_reftransV1_0001187 vs. ExPASy TrEMBL
Match: A0A067FRA0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g015952mg PE=4 SV=1)

HSP 1 Score: 382.874 bits (982), Expect = 3.529e-123
Identity = 200/338 (59.17%), Postives = 234/338 (69.23%), Query Frame = 3
Query:  381 HKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVFEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQM---VNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIPGDFIKLFTFSAL*FIDYFLPSHYLCN*V*TFKFAENHDPVTELTIVDMLRYSLEHADRNLPYKNWVMENV 1385
             +RR  V++EVLQSYDQLR R  SL +AK K+LSY PG WIENVGG  LSDYDVPKTTSLLLIGPKG GKSSLVN+IS+VFE+D FA ERAQ++YN SVGDGTY+LQ Y IPRGS SF LYD+R L+D  S+NINMI+ W+  GVRHGE VIR+SD SSLR +M+ K  ++    C P +   VNFVIFVVD ++VLKS+EGD   +    Q+++  F  P LSF+DDKPVVV+THGDLLS+ DR R R YLGELLGIPPAKQIFDIP                                  E+ DP  EL IVDMLRY LEHADRNL  K+     V
Sbjct:   46 QRRRDAVFREVLQSYDQLRTRIGSLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIPRGSNSFSLYDTRSLSDDASDNINMIKLWIMEGVRHGELVIRRSDSSSLRNRMRCKAHKIG---CEPSVIRKVNFVIFVVDGLAVLKSMEGDSDVEKQYNQIVATTFNCPYLSFRDDKPVVVVTHGDLLSLTDRARIRTYLGELLGIPPAKQIFDIP----------------------------------ESSDPENELIIVDMLRYCLEHADRNLSCKSCARNKV 346          
BLAST of g.raimondii_cottongen_reftransV1_0001187 vs. ExPASy TrEMBL
Match: V4U3P8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020463mg PE=4 SV=1)

HSP 1 Score: 384.415 bits (986), Expect = 4.319e-123
Identity = 204/360 (56.67%), Postives = 243/360 (67.50%), Query Frame = 3
Query:  381 HKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVFEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQM---VNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIPGDFIKLFTFSAL*FIDYFLPSHYLCN*V*TFKFAENHDPVTELTIVDMLRYSLEHADRNLPYKNWVMENVCLAPIIMAKMFCMAVFSFTLIC 1451
             +RR  V++EVLQSYDQLR R  SL +AK K+LSY PG WIENVGG  LSDYDVPKTTSLLLIGPKG GKSSLVN+IS+VFE+D FA ERAQ++YN SVGDGTY+LQ Y IPRGS SF LYD+R L+D  S+NINMI+ W+  GVRHGE VIR+SD SSLR +M+ K R++    C P +   VNFVIFVVD ++VLKS+EGD   +    Q+++  F  P LSF+DDKPVVV+THGDLLS+ DR R R YLGELLGIPPAKQIFDIP                                  E+ DP  EL I+DMLRY LEHADRNL  K+    N      +MA +  + V    +I 
Sbjct:   47 QRRRDAVFREVLQSYDQLRTRIGSLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIPRGSNSFSLYDTRSLSDDASDNINMIKLWIMEGVRHGELVIRRSDSSSLRNRMRCKARKIG---CDPSVIRKVNFVIFVVDGLAVLKSMEGDSDVEKQYDQIVATTFNCPYLSFRDDKPVVVVTHGDLLSLTDRARIRTYLGELLGIPPAKQIFDIP----------------------------------ESSDPENELIIIDMLRYCLEHADRNLSCKS-CARNKGFRVSVMAFLNLLLVLGIAIIA 368          
BLAST of g.raimondii_cottongen_reftransV1_0001187 vs. ExPASy TrEMBL
Match: A0A067FS24_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g015952mg PE=4 SV=1)

HSP 1 Score: 382.874 bits (982), Expect = 6.285e-123
Identity = 200/338 (59.17%), Postives = 234/338 (69.23%), Query Frame = 3
Query:  381 HKRRQKVYKEVLQSYDQLRVRSKSLNEAKYKVLSYFPGTWIENVGGKKLSDYDVPKTTSLLLIGPKGCGKSSLVNKISRVFEDDNFAPERAQISYNPSVGDGTYYLQGYMIPRGSASFCLYDSRGLADGTSENINMIQNWMNNGVRHGEPVIRKSDDSSLRRKMKFKPRELDWKFCRPQM---VNFVIFVVDAVSVLKSIEGDGVEDLLCLQMISEVFKQPCLSFKDDKPVVVITHGDLLSIADRVRARVYLGELLGIPPAKQIFDIPGDFIKLFTFSAL*FIDYFLPSHYLCN*V*TFKFAENHDPVTELTIVDMLRYSLEHADRNLPYKNWVMENV 1385
             +RR  V++EVLQSYDQLR R  SL +AK K+LSY PG WIENVGG  LSDYDVPKTTSLLLIGPKG GKSSLVN+IS+VFE+D FA ERAQ++YN SVGDGTY+LQ Y IPRGS SF LYD+R L+D  S+NINMI+ W+  GVRHGE VIR+SD SSLR +M+ K  ++    C P +   VNFVIFVVD ++VLKS+EGD   +    Q+++  F  P LSF+DDKPVVV+THGDLLS+ DR R R YLGELLGIPPAKQIFDIP                                  E+ DP  EL IVDMLRY LEHADRNL  K+     V
Sbjct:   61 QRRRDAVFREVLQSYDQLRTRIGSLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIPRGSNSFSLYDTRSLSDDASDNINMIKLWIMEGVRHGELVIRRSDSSSLRNRMRCKAHKIG---CEPSVIRKVNFVIFVVDGLAVLKSMEGDSDVEKQYNQIVATTFNCPYLSFRDDKPVVVVTHGDLLSLTDRARIRTYLGELLGIPPAKQIFDIP----------------------------------ESSDPENELIIVDMLRYCLEHADRNLSCKSCARNKV 361          
The following BLAST results are available for this feature:
BLAST of g.raimondii_cottongen_reftransV1_0001187 vs. ExPASy TrEMBL
Analysis Date: 2016-11-09 (Homology Analysis for Gossypium raimondii CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A061DM92_THECC4.683e-14153.02P-loop containing nucleoside triphosphate hydrolas... [more]
A0A067LA16_JATCU1.689e-12748.92Uncharacterized protein OS=Jatropha curcas GN=JCGZ... [more]
V4VU86_9ROSI8.814e-12456.67Uncharacterized protein OS=Citrus clementina GN=CI... [more]
A0A067FF17_CITSI2.507e-12359.17Uncharacterized protein OS=Citrus sinensis GN=CISI... [more]
A0A067FIL8_CITSI2.628e-12359.17Uncharacterized protein OS=Citrus sinensis GN=CISI... [more]
V4T926_9ROSI2.757e-12355.12Uncharacterized protein OS=Citrus clementina GN=CI... [more]
V4TYG1_9ROSI3.103e-12355.12Uncharacterized protein OS=Citrus clementina GN=CI... [more]
A0A067FRA0_CITSI3.529e-12359.17Uncharacterized protein OS=Citrus sinensis GN=CISI... [more]
V4U3P8_9ROSI4.319e-12356.67Uncharacterized protein OS=Citrus clementina GN=CI... [more]
A0A067FS24_CITSI6.285e-12359.17Uncharacterized protein OS=Citrus sinensis GN=CISI... [more]

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BLAST of g.raimondii_cottongen_reftransV1_0001187 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-09 (Homology Analysis for Gossypium raimondii CottonGen RefTrans V1 vs SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan analysis for Gossypium raimondii CottonGen RefTrans V1
Date Performed: 2016-11-09
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 25..103
e-value: 6.4E-5
score: 21.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 215..288
e-value: 2.2E-8
score: 33.1
coord: 104..180
e-value: 2.2E-8
score: 33.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 191..288
coord: 90..163
NoneNo IPR availablePANTHERPTHR14241INTERFERON-INDUCED PROTEIN 44coord: 1..299
NoneNo IPR availablePANTHERPTHR14241:SF10VON WILLEBRAND FACTOR A DOMAIN-CONTAINING PROTEIN DDB_G0292188coord: 1..299

Sequences
The following sequences are available for this feature:

contig sequence

>g.raimondii_cottongen_reftransV1_0001187 ID=g.raimondii_cottongen_reftransV1_0001187; Name=g.raimondii_cottongen_reftransV1_0001187; organism=Gossypium raimondii; type=contig; length=2100bp
GGTTTTTTTCACCAGGGGATATAGTTTACTTTCTCCTGCAAAATATGGGT
GGTGAGACGATCATCCCTCCTACCTTCACTTCTGAGGAAGAATACTCAGT
AGACCAAGATTTCTCACTTCCATCATTGTCTTCCCTAAACCCCACTTTGC
TTAGGTACTCTTTTTTTCCCCCCCTGTTTTAAAGGATGAAATGAGTTTTA
GCCTATATAATTTTCTTGGGATCAAGTGAAAAATGTTGAATTTGATTATG
TGGTTTCATATGAGCAAGGGATTACTTGAGAATGAAGGCTGAAGATGGAA
AAAATGAAAGCGATAGGTTGTTTTTAGAAGAATTTGATAAGATGGGTCCT
CAGTCATCTTCTCCGGACTTTGAAGCTTATCACAAGAGGAGACAGAAGGT
TTACAAAGAGGTTTTGCAGAGTTATGATCAATTGCGGGTTCGAAGTAAGA
GTCTAAACGAGGCAAAGTACAAGGTTTTGAGTTATTTCCCAGGAACATGG
ATTGAGAATGTTGGTGGCAAGAAACTGAGTGATTACGATGTTCCAAAAAC
AACATCACTCCTTTTGATTGGTCCAAAAGGGTGTGGAAAAAGTAGTCTTG
TCAATAAAATTTCCAGGGTGTTTGAGGATGACAATTTTGCACCAGAACGT
GCTCAAATATCATATAATCCATCTGTTGGAGATGGGACCTACTATCTTCA
AGGATACATGATCCCAAGAGGTTCAGCTTCATTCTGTCTTTATGATTCCA
GGGGCTTGGCCGATGGCACCTCTGAAAACATTAATATGATTCAAAATTGG
ATGAATAATGGTGTTCGTCATGGGGAACCTGTTATCAGGAAATCTGATGA
TTCCAGTTTAAGGAGAAAAATGAAATTTAAACCACGAGAGCTAGATTGGA
AGTTCTGCAGGCCCCAGATGGTTAATTTTGTCATTTTTGTTGTTGATGCG
GTTTCTGTTTTGAAATCCATTGAGGGTGATGGCGTGGAAGACTTACTCTG
CTTGCAGATGATCAGCGAGGTTTTCAAGCAACCGTGCTTATCATTTAAAG
ATGATAAACCTGTTGTCGTTATCACACATGGAGATTTACTTTCAATTGCT
GACCGTGTTCGTGCCCGTGTTTATTTGGGAGAGCTGCTTGGTATTCCACC
TGCAAAACAAATTTTTGATATTCCAGGTGACTTCATCAAGTTATTTACAT
TTTCTGCTTTGTAATTTATTGATTACTTTTTGCCATCCCATTATTTATGC
AATTGAGTGTAAACCTTTAAGTTTGCAGAAAACCATGATCCAGTAACAGA
GTTGACAATTGTTGATATGCTGCGCTACTCACTTGAGCACGCAGATCGAA
ATCTTCCGTACAAGAACTGGGTAATGGAAAATGTATGTCTTGCACCAATA
ATAATGGCTAAGATGTTCTGCATGGCTGTATTTTCTTTTACTCTGATTTG
TAAAGCATGCTGATAACTTGTAAATGCTTGCTTCTTTGGCTTGGTTCATT
ATGCTTACAAAATTTCTTGGCAAGTGTTTTGCTCGAATCCAAAATATTTG
TTGTTATCATTACGCTTTGTCAAGCAAGTCATTTAGCTTTTGTATCCTTA
CTGTACTTGCAAGGCATTCTTAGTTATTCATGATGTCTATGTATGATTCC
TCAGTGGTGATACGAGGTTTTGCGCAAGCAAGCATATTGCTTGGTTGATT
GTTTTGTTAAAGACTTCTTAGTAATGGCTATAATGATCACATGCAGGTTC
GCAAAGTCCCTCTATTTTCATGGTTATGTGTGCTAGCAATGCTGCTGGGT
ATTGCCTCAGGAATGGCTTGCATGCGATATTTGCATATGAGGCATCCTCG
GAAATCAGAATTTAAGATAGTTTGGCATACAATCCGGCATATATGGTAAA
GATAAAATAAAGTTGGCTTTCTTTATTTGGTTTGATACCCTTCAACCCAG
TTCATAAACTACACGAATGCATTCTATACGAATGCATATGTAAATGGTTT
GATCTTTTTGATGTATGTGGAACTTAAGTTTATTGGAATAAAGCTTTGGT
ATTATTTGGGGGTTGACCTTTACAGCTTTGGTAGCCAGCGTTGATATCAG
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase