g.raimondii_cottongen_reftransV1_0001186, g.raimondii_cottongen_reftransV1_0001186 (contig) Gossypium raimondii

Overview


Name	g.raimondii_cottongen_reftransV1_0001186
Unique Name	g.raimondii_cottongen_reftransV1_0001186
Type	contig
Organism	Gossypium raimondii (Gossypium raimondii)
Sequence length	5118

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Chr05	chromosome	g.raimondii_cottongen_reftransV1_0001186:1..5118 . Chr05:28162931..28173058 -

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium raimondii CottonGen RefTrans V1	2016-11-09
InterProScan analysis for Gossypium raimondii CottonGen RefTrans V1	2016-11-09
Homology Analysis for Gossypium raimondii CottonGen RefTrans V1 vs TrEMBL	2016-11-09
Homology Analysis for Gossypium raimondii CottonGen RefTrans V1 vs SwissProt	2016-11-09

Homology

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BLAST of g.raimondii_cottongen_reftransV1_0001186 vs. ExPASy TrEMBL
Match: A0A0D2RM27_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G138800 PE=4 SV=1)

HSP 1 Score: 916.376 bits (2367), Expect = 0.000e+0
Identity = 464/495 (93.74%), Postives = 477/495 (96.36%), Query Frame = -3

Query: 3593 NIHRVGSIVRDIGDPCLSQSPIKANKMLKPEKWQAAFDNEGKVVDFHKVLKLIILGGVDPSIRSEVWEFLLGCYALGSTADHRRQLRIARRERYKDLIKQCQTMHSSIGTGSLAYPVGSKVMDMRTPSKEAKVECREASTDDTDKREKYSDLGNNCSDSLYVDQRVNVSNSGDLTSVRRNXXXXXXXXXXXXXSVPCGPCSSKRGGDCNGSDFITECDFDFPPLPVTDLFEKSEDKKEFDANEEVYSAQYKLMFEDDNMHSFQINNNADLIMEXXXXXXXXXXXSCRYNSEIELVTYSDDYEPVLRPNSVSYKTETVNRLSISSVPETPFVNATRSQERAAQEERVSEWLWTLHRIVVDVVRTDSNLEFYEDKRNVARMSDILAVYAWVDRATGYCQGMSDLLSPFVVIFEDNADAFWCFEMLIRRMRENFQMEGPTGVMKQLQALWHILELTDREIFIHLSKIGAESLHFAFPMLLVLFRRELSFNDALCMWEV 5077
            NI +VGS+VRDIGDPCLS S IK  KMLK EKWQA FDNEGKV  F KVLKLIILGGVDPSIR EVWEFLLGCYALGSTADHRRQLRIARRERYKDLIKQCQTMHSSIGTGSLAYPVGSKVMDMRTPSKEAKVECREASTDDTDKREKYSDLGNNCSDSLYVDQRVNVSNSGDLTSVRRNADSAAYDSCSSSTSVPCGPCSSKRGGDCNGSDFITECDFDFPPLPVTDLFEKSEDKKEFDANEEVYSAQYKLMFEDDNMHSFQINNNADLIMESNVSSSLSKNVSCRYNSEIELVTYSDDYEPVLRPNSVSYKTETVNRLSISSVPETPFVNATRSQERAAQEERVSEWLWTLHRIVVDVVRTDS+L+FY+D RN+ARMSDILAVYAWVD  TGYCQGMSDLLSPFVV+FEDNADAFWCFEMLIRRMRENF+++GPTGVMKQLQALWHILE TDREIF HLS IGAESLHFAFPMLLVLFRRELSFN++L MWE+
Sbjct:   24 NIQKVGSVVRDIGDPCLSHSSIKVGKMLKQEKWQAIFDNEGKVSGFQKVLKLIILGGVDPSIRPEVWEFLLGCYALGSTADHRRQLRIARRERYKDLIKQCQTMHSSIGTGSLAYPVGSKVMDMRTPSKEAKVECREASTDDTDKREKYSDLGNNCSDSLYVDQRVNVSNSGDLTSVRRNADSAAYDSCSSSTSVPCGPCSSKRGGDCNGSDFITECDFDFPPLPVTDLFEKSEDKKEFDANEEVYSAQYKLMFEDDNMHSFQINNNADLIMESNVSSSLSKNVSCRYNSEIELVTYSDDYEPVLRPNSVSYKTETVNRLSISSVPETPFVNATRSQERAAQEERVSEWLWTLHRIVVDVVRTDSHLDFYKDTRNLARMSDILAVYAWVDPTTGYCQGMSDLLSPFVVLFEDNADAFWCFEMLIRRMRENFKIDGPTGVMKQLQALWHILEFTDREIFAHLSNIGAESLHFAFPMLLVLFRRELSFNESLRMWEM 518

HSP 2 Score: 235.728 bits (600), Expect = 2.426e-61
Identity = 113/158 (71.52%), Postives = 131/158 (82.91%), Query Frame = -1

Query: 2797 MMWAADFDESVNCNLEKICLEALTVQVPGDSRAEDEEENTENGNHNAIGGLQFKHSLSENEGIKAASTYHFCGLTRNFWSRNDRLQICNVVSPTRKGDDDLPVFCVAAILIMNRQKLIKETRSIDDMIKIFNDKLLKVHVRRCVGTAIRLRKKYFCKV 3270
            MMWAADFDES +C+LE ICLEAL VQ+P D   E  EEN E+G+    G LQ KHSLSEN G K+A+ + FCGLTRNF S+N+ LQIC +VS TRKGDD+LPVFCVAAILIMNRQK+IKET SIDDMIKIFNDKLLK+HV+RCVG+AI+LRKKY  K+
Sbjct:  518 MMWAADFDESASCDLEDICLEALVVQLPRDLGEETREENPESGDDGVKGSLQSKHSLSENAGFKSAAAHRFCGLTRNFLSKNNILQICGLVSSTRKGDDNLPVFCVAAILIMNRQKIIKETHSIDDMIKIFNDKLLKIHVKRCVGSAIKLRKKYLYKL 675

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BLAST of g.raimondii_cottongen_reftransV1_0001186 vs. ExPASy TrEMBL
Match: A0A0D2T7R1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G138800 PE=4 SV=1)

HSP 1 Score: 910.598 bits (2352), Expect = 0.000e+0
Identity = 464/498 (93.17%), Postives = 478/498 (95.98%), Query Frame = -3

Query: 3593 NIHRVGSIVRDIGDPCLSQSPIK---ANKMLKPEKWQAAFDNEGKVVDFHKVLKLIILGGVDPSIRSEVWEFLLGCYALGSTADHRRQLRIARRERYKDLIKQCQTMHSSIGTGSLAYPVGSKVMDMRTPSKEAKVECREASTDDTDKREKYSDLGNNCSDSLYVDQRVNVSNSGDLTSVRRNXXXXXXXXXXXXXSVPCGPCSSKRGGDCNGSDFITECDFDFPPLPVTDLFEKSEDKKEFDANEEVYSAQYKLMFEDDNMHSFQINNNADLIMEXXXXXXXXXXXSCRYNSEIELVTYSDDYEPVLRPNSVSYKTETVNRLSISSVPETPFVNATRSQERAAQEERVSEWLWTLHRIVVDVVRTDSNLEFYEDKRNVARMSDILAVYAWVDRATGYCQGMSDLLSPFVVIFEDNADAFWCFEMLIRRMRENFQMEGPTGVMKQLQALWHILELTDREIFIHLSKIGAESLHFAFPMLLVLFRRELSFNDALCMWEV 5077
            NI +VGS+VRDIGDPCLS S IK   + KMLK EKWQA FDNEGKV  F KVLKLIILGGVDPSIR EVWEFLLGCYALGSTADHRRQLRIARRERYKDLIKQCQTMHSSIGTGSLAYPVGSKVMDMRTPSKEAKVECREASTDDTDKREKYSDLGNNCSDSLYVDQRVNVSNSGDLTSVRRNADSAAYDSCSSSTSVPCGPCSSKRGGDCNGSDFITECDFDFPPLPVTDLFEKSEDKKEFDANEEVYSAQYKLMFEDDNMHSFQINNNADLIMESNVSSSLSKNVSCRYNSEIELVTYSDDYEPVLRPNSVSYKTETVNRLSISSVPETPFVNATRSQERAAQEERVSEWLWTLHRIVVDVVRTDS+L+FY+D RN+ARMSDILAVYAWVD  TGYCQGMSDLLSPFVV+FEDNADAFWCFEMLIRRMRENF+++GPTGVMKQLQALWHILE TDREIF HLS IGAESLHFAFPMLLVLFRRELSFN++L MWE+
Sbjct:   24 NIQKVGSVVRDIGDPCLSHSSIKVVFSCKMLKQEKWQAIFDNEGKVSGFQKVLKLIILGGVDPSIRPEVWEFLLGCYALGSTADHRRQLRIARRERYKDLIKQCQTMHSSIGTGSLAYPVGSKVMDMRTPSKEAKVECREASTDDTDKREKYSDLGNNCSDSLYVDQRVNVSNSGDLTSVRRNADSAAYDSCSSSTSVPCGPCSSKRGGDCNGSDFITECDFDFPPLPVTDLFEKSEDKKEFDANEEVYSAQYKLMFEDDNMHSFQINNNADLIMESNVSSSLSKNVSCRYNSEIELVTYSDDYEPVLRPNSVSYKTETVNRLSISSVPETPFVNATRSQERAAQEERVSEWLWTLHRIVVDVVRTDSHLDFYKDTRNLARMSDILAVYAWVDPTTGYCQGMSDLLSPFVVLFEDNADAFWCFEMLIRRMRENFKIDGPTGVMKQLQALWHILEFTDREIFAHLSNIGAESLHFAFPMLLVLFRRELSFNESLRMWEM 521

HSP 2 Score: 236.113 bits (601), Expect = 2.472e-61
Identity = 113/158 (71.52%), Postives = 131/158 (82.91%), Query Frame = -1

Query: 2797 MMWAADFDESVNCNLEKICLEALTVQVPGDSRAEDEEENTENGNHNAIGGLQFKHSLSENEGIKAASTYHFCGLTRNFWSRNDRLQICNVVSPTRKGDDDLPVFCVAAILIMNRQKLIKETRSIDDMIKIFNDKLLKVHVRRCVGTAIRLRKKYFCKV 3270
            MMWAADFDES +C+LE ICLEAL VQ+P D   E  EEN E+G+    G LQ KHSLSEN G K+A+ + FCGLTRNF S+N+ LQIC +VS TRKGDD+LPVFCVAAILIMNRQK+IKET SIDDMIKIFNDKLLK+HV+RCVG+AI+LRKKY  K+
Sbjct:  521 MMWAADFDESASCDLEDICLEALVVQLPRDLGEETREENPESGDDGVKGSLQSKHSLSENAGFKSAAAHRFCGLTRNFLSKNNILQICGLVSSTRKGDDNLPVFCVAAILIMNRQKIIKETHSIDDMIKIFNDKLLKIHVKRCVGSAIKLRKKYLYKL 678

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BLAST of g.raimondii_cottongen_reftransV1_0001186 vs. ExPASy TrEMBL
Match: A0A0B0PW43_GOSAR (Tbc1d15 OS=Gossypium arboreum GN=F383_16157 PE=4 SV=1)

HSP 1 Score: 897.116 bits (2317), Expect = 0.000e+0
Identity = 457/503 (90.85%), Postives = 475/503 (94.43%), Query Frame = -3

Query: 3593 NIHRVGSIVRDIGDPCLSQSPIKANKMLKPEKWQAAFDNEGKVVDFHKVLKLIILGGVDPSIRSEVWEFLLGCYALGSTADHRRQLRIARRERYKDLIKQCQTMHSSIGTGSLAYPVGSKVMDMRTPSKEAKVECREASTDDTDKREKYSDLGNNCSDSLYVDQRVNVSNSGDLTSVRRNXXXXXXXXXXXXXSVPCGPCSSKRGGDCNGSDFITECDFDFPPLPVTDLFEKSEDKKEFDANEEVYSAQYKLMFEDDNMHSFQINNNADLIMEXXXXXXXXXXXSCRYNSEIELVTYSDDYEPVLRPNSVSYKTETVNRLSISSVPETPFVNATRSQERAAQEERVSEWLWTLHRI--------VVDVVRTDSNLEFYEDKRNVARMSDILAVYAWVDRATGYCQGMSDLLSPFVVIFEDNADAFWCFEMLIRRMRENFQMEGPTGVMKQLQALWHILELTDREIFIHLSKIGAESLHFAFPMLLVLFRRELSFNDALCMWEV 5077
            NI +VGS+VRDIGDPC+S S IK  KMLKPEKWQA FDNEGKV  F KVLKLIILGGVDPSIR EVWEFLLGCYALGSTADHRRQLRIARRERYKDLIKQCQTMHSSIGTGSLAYPVGSKVMDMRTPSKEAKVECREASTDDTDKREKYSDLGNNCSDS Y+D+RVNVSNSGDLTSVRRNADSAAYDSCSSSTSVPCGPCSSKRG DCNGSDFITECDFDFPPLPVTDLFEKSED+KEFDANEEV+SAQYKLMFEDDNMHSFQINNNADLIMESNVSSSLSKNVSCRYNSEIELVTYSDDYEPVLRPNSVSYKTETVNRLSISSVPETPFVNATRSQE AAQEERVSEWLWTLHRI        VVDVVRTDS+L+FY+D RN+ARMSDILAVYAWVD  TGYCQGMSDLLSPFVV+FEDNADAFWCFEMLIRRMRENF+++GPTGVMKQLQALWHILE TDREIF HLS IGAESLHFAFPMLLVLFRRELSFN++L MWE+
Sbjct:   24 NIQKVGSVVRDIGDPCVSHSSIKVGKMLKPEKWQATFDNEGKVSGFQKVLKLIILGGVDPSIRPEVWEFLLGCYALGSTADHRRQLRIARRERYKDLIKQCQTMHSSIGTGSLAYPVGSKVMDMRTPSKEAKVECREASTDDTDKREKYSDLGNNCSDSSYIDRRVNVSNSGDLTSVRRNADSAAYDSCSSSTSVPCGPCSSKRGVDCNGSDFITECDFDFPPLPVTDLFEKSEDEKEFDANEEVFSAQYKLMFEDDNMHSFQINNNADLIMESNVSSSLSKNVSCRYNSEIELVTYSDDYEPVLRPNSVSYKTETVNRLSISSVPETPFVNATRSQEGAAQEERVSEWLWTLHRIADRILILSVVDVVRTDSHLDFYKDTRNLARMSDILAVYAWVDPTTGYCQGMSDLLSPFVVLFEDNADAFWCFEMLIRRMRENFKVDGPTGVMKQLQALWHILEFTDREIFAHLSNIGAESLHFAFPMLLVLFRRELSFNESLRMWEM 526

HSP 2 Score: 235.343 bits (599), Expect = 4.233e-61
Identity = 113/158 (71.52%), Postives = 131/158 (82.91%), Query Frame = -1

Query: 2797 MMWAADFDESVNCNLEKICLEALTVQVPGDSRAEDEEENTENGNHNAIGGLQFKHSLSENEGIKAASTYHFCGLTRNFWSRNDRLQICNVVSPTRKGDDDLPVFCVAAILIMNRQKLIKETRSIDDMIKIFNDKLLKVHVRRCVGTAIRLRKKYFCKV 3270
            MMWAADFDES +C+LE ICLEAL VQ+P D   E  EEN E+G+    G LQ KHSLSEN G K+A+ + FCGLTRNF S+N+ LQIC +VS TRKGDD+LPVFCVAAILIMNRQK+IKET SIDDMIKIFNDKLLK+HV+RCVG+AI+LRKKY  K+
Sbjct:  526 MMWAADFDESASCDLEDICLEALVVQLPRDLGEEIREENPESGDDGVKGSLQSKHSLSENAGFKSAAAHRFCGLTRNFLSKNNLLQICGLVSSTRKGDDNLPVFCVAAILIMNRQKIIKETHSIDDMIKIFNDKLLKIHVKRCVGSAIKLRKKYLYKL 683

[Close]

BLAST of g.raimondii_cottongen_reftransV1_0001186 vs. ExPASy TrEMBL
Match: A0A0B0PRJ2_GOSAR (Tbc1d15 OS=Gossypium arboreum GN=F383_16157 PE=4 SV=1)

HSP 1 Score: 896.345 bits (2315), Expect = 0.000e+0
Identity = 457/503 (90.85%), Postives = 475/503 (94.43%), Query Frame = -3

Query: 3593 NIHRVGSIVRDIGDPCLSQSPIKANKMLKPEKWQAAFDNEGKVVDFHKVLKLIILGGVDPSIRSEVWEFLLGCYALGSTADHRRQLRIARRERYKDLIKQCQTMHSSIGTGSLAYPVGSKVMDMRTPSKEAKVECREASTDDTDKREKYSDLGNNCSDSLYVDQRVNVSNSGDLTSVRRNXXXXXXXXXXXXXSVPCGPCSSKRGGDCNGSDFITECDFDFPPLPVTDLFEKSEDKKEFDANEEVYSAQYKLMFEDDNMHSFQINNNADLIMEXXXXXXXXXXXSCRYNSEIELVTYSDDYEPVLRPNSVSYKTETVNRLSISSVPETPFVNATRSQERAAQEERVSEWLWTLHRI--------VVDVVRTDSNLEFYEDKRNVARMSDILAVYAWVDRATGYCQGMSDLLSPFVVIFEDNADAFWCFEMLIRRMRENFQMEGPTGVMKQLQALWHILELTDREIFIHLSKIGAESLHFAFPMLLVLFRRELSFNDALCMWEV 5077
            NI +VGS+VRDIGDPC+S S IK  KMLKPEKWQA FDNEGKV  F KVLKLIILGGVDPSIR EVWEFLLGCYALGSTADHRRQLRIARRERYKDLIKQCQTMHSSIGTGSLAYPVGSKVMDMRTPSKEAKVECREASTDDTDKREKYSDLGNNCSDS Y+D+RVNVSNSGDLTSVRRNADSAAYDSCSSSTSVPCGPCSSKRG DCNGSDFITECDFDFPPLPVTDLFEKSED+KEFDANEEV+SAQYKLMFEDDNMHSFQINNNADLIMESNVSSSLSKNVSCRYNSEIELVTYSDDYEPVLRPNSVSYKTETVNRLSISSVPETPFVNATRSQE AAQEERVSEWLWTLHRI        VVDVVRTDS+L+FY+D RN+ARMSDILAVYAWVD  TGYCQGMSDLLSPFVV+FEDNADAFWCFEMLIRRMRENF+++GPTGVMKQLQALWHILE TDREIF HLS IGAESLHFAFPMLLVLFRRELSFN++L MWE+
Sbjct:   24 NIQKVGSVVRDIGDPCVSHSSIKVGKMLKPEKWQATFDNEGKVSGFQKVLKLIILGGVDPSIRPEVWEFLLGCYALGSTADHRRQLRIARRERYKDLIKQCQTMHSSIGTGSLAYPVGSKVMDMRTPSKEAKVECREASTDDTDKREKYSDLGNNCSDSSYIDRRVNVSNSGDLTSVRRNADSAAYDSCSSSTSVPCGPCSSKRGVDCNGSDFITECDFDFPPLPVTDLFEKSEDEKEFDANEEVFSAQYKLMFEDDNMHSFQINNNADLIMESNVSSSLSKNVSCRYNSEIELVTYSDDYEPVLRPNSVSYKTETVNRLSISSVPETPFVNATRSQEGAAQEERVSEWLWTLHRIADRILILSVVDVVRTDSHLDFYKDTRNLARMSDILAVYAWVDPTTGYCQGMSDLLSPFVVLFEDNADAFWCFEMLIRRMRENFKVDGPTGVMKQLQALWHILEFTDREIFAHLSNIGAESLHFAFPMLLVLFRRELSFNESLRMWEM 526

HSP 2 Score: 238.424 bits (607), Expect = 7.673e-62
Identity = 123/205 (60.00%), Postives = 147/205 (71.71%), Query Frame = -1

Query: 2659 MMWAADFDESVNCNLEKICLEALTVQVPGDSRAEDEEENTENGNHNAIGGLQFKHSLSENEGIKAASTYHFCGLTRNFWSRNDRLQICNVVSPTRKGDDDLPVFCVAAILIMNRQKLIKETRSIDDMIKIFNDKLLKVHVRRCVGTAIRLRKKYFCKVSNCIIFLLWKYEREVKCKFN-PFLCFAVNPPTFCFFLLLSLMTVQRH 3270
            MMWAADFDES +C+LE ICLEAL VQ+P D   E  EEN E+G+    G LQ KHSLSEN G K+A+ + FCGLTRNF S+N+ LQIC +VS TRKGDD+LPVFCVAAILIMNRQK+IKET SIDDMIKIFNDKLLK+HV+RCVG+AI+LRKKY  K+         K + ++  KF   FLC+ +    F    L+      RH
Sbjct:  526 MMWAADFDESASCDLEDICLEALVVQLPRDLGEEIREENPESGDDGVKGSLQSKHSLSENAGFKSAAAHRFCGLTRNFLSKNNLLQICGLVSSTRKGDDNLPVFCVAAILIMNRQKIIKETHSIDDMIKIFNDKLLKIHVKRCVGSAIKLRKKYLYKLIKSKSHADRKIDLDMAWKFMVGFLCWHIKQSAFAIQRLVQFF--HRH 728

[Close]

BLAST of g.raimondii_cottongen_reftransV1_0001186 vs. ExPASy TrEMBL
Match: A0A0D2RM32_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G138800 PE=4 SV=1)

HSP 1 Score: 876.315 bits (2263), Expect = 0.000e+0
Identity = 445/469 (94.88%), Postives = 456/469 (97.23%), Query Frame = -3

Query: 3593 MLKPEKWQAAFDNEGKVVDFHKVLKLIILGGVDPSIRSEVWEFLLGCYALGSTADHRRQLRIARRERYKDLIKQCQTMHSSIGTGSLAYPVGSKVMDMRTPSKEAKVECREASTDDTDKREKYSDLGNNCSDSLYVDQRVNVSNSGDLTSVRRNXXXXXXXXXXXXXSVPCGPCSSKRGGDCNGSDFITECDFDFPPLPVTDLFEKSEDKKEFDANEEVYSAQYKLMFEDDNMHSFQINNNADLIMEXXXXXXXXXXXSCRYNSEIELVTYSDDYEPVLRPNSVSYKTETVNRLSISSVPETPFVNATRSQERAAQEERVSEWLWTLHRIVVDVVRTDSNLEFYEDKRNVARMSDILAVYAWVDRATGYCQGMSDLLSPFVVIFEDNADAFWCFEMLIRRMRENFQMEGPTGVMKQLQALWHILELTDREIFIHLSKIGAESLHFAFPMLLVLFRRELSFNDALCMWEV 4999
            MLK EKWQA FDNEGKV  F KVLKLIILGGVDPSIR EVWEFLLGCYALGSTADHRRQLRIARRERYKDLIKQCQTMHSSIGTGSLAYPVGSKVMDMRTPSKEAKVECREASTDDTDKREKYSDLGNNCSDSLYVDQRVNVSNSGDLTSVRRNADSAAYDSCSSSTSVPCGPCSSKRGGDCNGSDFITECDFDFPPLPVTDLFEKSEDKKEFDANEEVYSAQYKLMFEDDNMHSFQINNNADLIMESNVSSSLSKNVSCRYNSEIELVTYSDDYEPVLRPNSVSYKTETVNRLSISSVPETPFVNATRSQERAAQEERVSEWLWTLHRIVVDVVRTDS+L+FY+D RN+ARMSDILAVYAWVD  TGYCQGMSDLLSPFVV+FEDNADAFWCFEMLIRRMRENF+++GPTGVMKQLQALWHILE TDREIF HLS IGAESLHFAFPMLLVLFRRELSFN++L MWE+
Sbjct:    1 MLKQEKWQAIFDNEGKVSGFQKVLKLIILGGVDPSIRPEVWEFLLGCYALGSTADHRRQLRIARRERYKDLIKQCQTMHSSIGTGSLAYPVGSKVMDMRTPSKEAKVECREASTDDTDKREKYSDLGNNCSDSLYVDQRVNVSNSGDLTSVRRNADSAAYDSCSSSTSVPCGPCSSKRGGDCNGSDFITECDFDFPPLPVTDLFEKSEDKKEFDANEEVYSAQYKLMFEDDNMHSFQINNNADLIMESNVSSSLSKNVSCRYNSEIELVTYSDDYEPVLRPNSVSYKTETVNRLSISSVPETPFVNATRSQERAAQEERVSEWLWTLHRIVVDVVRTDSHLDFYKDTRNLARMSDILAVYAWVDPTTGYCQGMSDLLSPFVVLFEDNADAFWCFEMLIRRMRENFKIDGPTGVMKQLQALWHILEFTDREIFAHLSNIGAESLHFAFPMLLVLFRRELSFNESLRMWEM 469

HSP 2 Score: 236.498 bits (602), Expect = 7.269e-62
Identity = 113/158 (71.52%), Postives = 131/158 (82.91%), Query Frame = -1

Query: 2797 MMWAADFDESVNCNLEKICLEALTVQVPGDSRAEDEEENTENGNHNAIGGLQFKHSLSENEGIKAASTYHFCGLTRNFWSRNDRLQICNVVSPTRKGDDDLPVFCVAAILIMNRQKLIKETRSIDDMIKIFNDKLLKVHVRRCVGTAIRLRKKYFCKV 3270
            MMWAADFDES +C+LE ICLEAL VQ+P D   E  EEN E+G+    G LQ KHSLSEN G K+A+ + FCGLTRNF S+N+ LQIC +VS TRKGDD+LPVFCVAAILIMNRQK+IKET SIDDMIKIFNDKLLK+HV+RCVG+AI+LRKKY  K+
Sbjct:  469 MMWAADFDESASCDLEDICLEALVVQLPRDLGEETREENPESGDDGVKGSLQSKHSLSENAGFKSAAAHRFCGLTRNFLSKNNILQICGLVSSTRKGDDNLPVFCVAAILIMNRQKIIKETHSIDDMIKIFNDKLLKIHVKRCVGSAIKLRKKYLYKL 626

[Close]

BLAST of g.raimondii_cottongen_reftransV1_0001186 vs. ExPASy TrEMBL
Match: A0A0D2VLZ1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G138800 PE=4 SV=1)

HSP 1 Score: 875.544 bits (2261), Expect = 0.000e+0
Identity = 446/471 (94.69%), Postives = 457/471 (97.03%), Query Frame = -3

Query: 3593 NKMLKPEKWQAAFDNEGKVVDFHKVLKLIILGGVDPSIRSEVWEFLLGCYALGSTADHRRQLRIARRERYKDLIKQCQTMHSSIGTGSLAYPVGSKVMDMRTPSKEAKVECREASTDDTDKREKYSDLGNNCSDSLYVDQRVNVSNSGDLTSVRRNXXXXXXXXXXXXXSVPCGPCSSKRGGDCNGSDFITECDFDFPPLPVTDLFEKSEDKKEFDANEEVYSAQYKLMFEDDNMHSFQINNNADLIMEXXXXXXXXXXXSCRYNSEIELVTYSDDYEPVLRPNSVSYKTETVNRLSISSVPETPFVNATRSQERAAQEERVSEWLWTLHRIVVDVVRTDSNLEFYEDKRNVARMSDILAVYAWVDRATGYCQGMSDLLSPFVVIFEDNADAFWCFEMLIRRMRENFQMEGPTGVMKQLQALWHILELTDREIFIHLSKIGAESLHFAFPMLLVLFRRELSFNDALCMWEV 5005
             KMLK EKWQA FDNEGKV  F KVLKLIILGGVDPSIR EVWEFLLGCYALGSTADHRRQLRIARRERYKDLIKQCQTMHSSIGTGSLAYPVGSKVMDMRTPSKEAKVECREASTDDTDKREKYSDLGNNCSDSLYVDQRVNVSNSGDLTSVRRNADSAAYDSCSSSTSVPCGPCSSKRGGDCNGSDFITECDFDFPPLPVTDLFEKSEDKKEFDANEEVYSAQYKLMFEDDNMHSFQINNNADLIMESNVSSSLSKNVSCRYNSEIELVTYSDDYEPVLRPNSVSYKTETVNRLSISSVPETPFVNATRSQERAAQEERVSEWLWTLHRIVVDVVRTDS+L+FY+D RN+ARMSDILAVYAWVD  TGYCQGMSDLLSPFVV+FEDNADAFWCFEMLIRRMRENF+++GPTGVMKQLQALWHILE TDREIF HLS IGAESLHFAFPMLLVLFRRELSFN++L MWE+
Sbjct:   38 GKMLKQEKWQAIFDNEGKVSGFQKVLKLIILGGVDPSIRPEVWEFLLGCYALGSTADHRRQLRIARRERYKDLIKQCQTMHSSIGTGSLAYPVGSKVMDMRTPSKEAKVECREASTDDTDKREKYSDLGNNCSDSLYVDQRVNVSNSGDLTSVRRNADSAAYDSCSSSTSVPCGPCSSKRGGDCNGSDFITECDFDFPPLPVTDLFEKSEDKKEFDANEEVYSAQYKLMFEDDNMHSFQINNNADLIMESNVSSSLSKNVSCRYNSEIELVTYSDDYEPVLRPNSVSYKTETVNRLSISSVPETPFVNATRSQERAAQEERVSEWLWTLHRIVVDVVRTDSHLDFYKDTRNLARMSDILAVYAWVDPTTGYCQGMSDLLSPFVVLFEDNADAFWCFEMLIRRMRENFKIDGPTGVMKQLQALWHILEFTDREIFAHLSNIGAESLHFAFPMLLVLFRRELSFNESLRMWEM 508

HSP 2 Score: 235.728 bits (600), Expect = 2.469e-61
Identity = 113/158 (71.52%), Postives = 131/158 (82.91%), Query Frame = -1

Query: 2797 MMWAADFDESVNCNLEKICLEALTVQVPGDSRAEDEEENTENGNHNAIGGLQFKHSLSENEGIKAASTYHFCGLTRNFWSRNDRLQICNVVSPTRKGDDDLPVFCVAAILIMNRQKLIKETRSIDDMIKIFNDKLLKVHVRRCVGTAIRLRKKYFCKV 3270
            MMWAADFDES +C+LE ICLEAL VQ+P D   E  EEN E+G+    G LQ KHSLSEN G K+A+ + FCGLTRNF S+N+ LQIC +VS TRKGDD+LPVFCVAAILIMNRQK+IKET SIDDMIKIFNDKLLK+HV+RCVG+AI+LRKKY  K+
Sbjct:  508 MMWAADFDESASCDLEDICLEALVVQLPRDLGEETREENPESGDDGVKGSLQSKHSLSENAGFKSAAAHRFCGLTRNFLSKNNILQICGLVSSTRKGDDNLPVFCVAAILIMNRQKIIKETHSIDDMIKIFNDKLLKIHVKRCVGSAIKLRKKYLYKL 665

[Close]

BLAST of g.raimondii_cottongen_reftransV1_0001186 vs. ExPASy TrEMBL
Match: A0A061EIE7_THECC (Ypt/Rab-GAP domain of gyp1p superfamily protein, putative isoform 1 OS=Theobroma cacao GN=TCM_019958 PE=4 SV=1)

HSP 1 Score: 802.742 bits (2072), Expect = 0.000e+0
Identity = 414/500 (82.80%), Postives = 441/500 (88.20%), Query Frame = -3

Query: 3593 NIHRVGSIVRDIGDPCLSQSPIKANKMLKPEKWQAAFDNEGKVVDFHKVLKLIILGGVDPSIRSEVWEFLLGCYALGSTADHRRQLRIARRERYKDLIKQCQTMHSSIGTGSLAYPVGSKVMDMRTPSK-----EAKVECREASTDDTDKREKYSDLGNNCSDSLYVDQRVNVSNSGDLTSVRRNXXXXXXXXXXXXXSVPCGPCSSKRGGDCNGSDFITECDFDFPPLPVTDLFEKSEDKKEFDANEEVYSAQYKLMFEDDNMHSFQINNNADLIMEXXXXXXXXXXXSCRYNSEIELVTYSDDYEPVLRPNSVSYKTETVNRLSISSVPETPFVNATRSQERAAQEERVSEWLWTLHRIVVDVVRTDSNLEFYEDKRNVARMSDILAVYAWVDRATGYCQGMSDLLSPFVVIFEDNADAFWCFEMLIRRMRENFQMEGPTGVMKQLQALWHILELTDREIFIHLSKIGAESLHFAFPMLLVLFRRELSFNDALCMWEV 5077
            NI RVGSIVRDIGDPCLSQSPIK +KMLKPEKWQA FDNEGKV  F K L+LI+LGGVDPSIR EVWEFLLGCYALGSTAD+RRQLR ARRERYKDL+KQCQTMHSSIGTGSLAY VGSKVMDMRT SK     E+KVECR+ASTDDTDK EKYSDLGNN +D  Y DQR   S+  DL SVR N  +AAYDSC  STS   G CSSK GG+C+GS+FITEC FDFPPLPVTDLFEKSEDKKEFDANEE YSAQ KL+FEDDNMHSFQINNNADLIMESNVS SLS N+SC +NSEI+L+ + D YEPVL  N+VSYKTETVNRL IS VPETP VNAT SQE AA +ERVSEWLWTLHRIVVDVVRTDS+LEFYED RN+ARMSDILAVYAWVD ATGYCQGMSDLLSPFVV+FEDNADAFWCFEML+RRMRENFQMEGPTGVMKQLQALWHILELTDREIF HLS IGAESLHFAFPMLLVLFRRELSFN+AL MWE+
Sbjct:   27 NIQRVGSIVRDIGDPCLSQSPIKVSKMLKPEKWQATFDNEGKVSGFQKALRLIVLGGVDPSIRPEVWEFLLGCYALGSTADYRRQLRTARRERYKDLVKQCQTMHSSIGTGSLAYNVGSKVMDMRTSSKDGGKRESKVECRQASTDDTDKTEKYSDLGNNGTDKSYADQRECCSDITDLVSVRGNTQTAAYDSCFLSTSGLYGRCSSKIGGECHGSEFITECHFDFPPLPVTDLFEKSEDKKEFDANEEGYSAQCKLIFEDDNMHSFQINNNADLIMESNVSPSLSNNISCPFNSEIQLI-HPDAYEPVLTSNNVSYKTETVNRLRISDVPETPLVNATISQEGAANDERVSEWLWTLHRIVVDVVRTDSHLEFYEDTRNLARMSDILAVYAWVDPATGYCQGMSDLLSPFVVLFEDNADAFWCFEMLLRRMRENFQMEGPTGVMKQLQALWHILELTDREIFAHLSNIGAESLHFAFPMLLVLFRRELSFNEALRMWEM 525

HSP 2 Score: 268.085 bits (684), Expect = 4.544e-72
Identity = 127/158 (80.38%), Postives = 140/158 (88.61%), Query Frame = -1

Query: 2797 MMWAADFDESVNCNLEKICLEALTVQVPGDSRAEDEEENTENGNHNAIGGLQFKHSLSENEGIKAASTYHFCGLTRNFWSRNDRLQICNVVSPTRKGDDDLPVFCVAAILIMNRQKLIKETRSIDDMIKIFNDKLLKVHVRRCVGTAIRLRKKYFCKV 3270
            MMWAADFDESV CNLE+ICLEAL VQ+P DS +E  EEN+ENGN     GLQ KHSLSEN+GIK+AS Y FCGLTRNFWSRNDRLQICNVVS TRKGDDDLPVFCVAAILIMNRQK+I+ETRSIDDMIKIFNDKLLK+HV+RC+G AI+LRKKY  K+
Sbjct:  525 MMWAADFDESVTCNLEEICLEALIVQLPRDSGSEIGEENSENGNDGVKDGLQLKHSLSENDGIKSASAYPFCGLTRNFWSRNDRLQICNVVSSTRKGDDDLPVFCVAAILIMNRQKIIRETRSIDDMIKIFNDKLLKIHVKRCIGAAIKLRKKYLYKL 682

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BLAST of g.raimondii_cottongen_reftransV1_0001186 vs. ExPASy TrEMBL
Match: A0A0D2RDS9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G126100 PE=4 SV=1)

HSP 1 Score: 779.63 bits (2012), Expect = 0.000e+0
Identity = 418/513 (81.48%), Postives = 447/513 (87.13%), Query Frame = -3

Query: 3593 YGKXXXXXXXXXVNIHRVGSIVRDIGDPCLSQSPIKANKMLKPEKWQAAFDNEGKVVDFHKVLKLIILGGVDPSIRSEVWEFLLGCYALGSTADHRRQLRIARRERYKDLIKQCQTMHSSIGTGSLAYPVGSKVMDMRTPSK-----EAKVECREASTDDTDKREKYSDLGNNCSDSLYVDQRVNVSNSGDLTSVRRNXXXXXXXXXXXXXSVPCGPCSSKRGGDCNGSDFITECDFDFPPLPVTDLFEKSEDKKEFDANEEVYSAQYKLMFEDDNMHSFQINNNADLIMEXXXXXXXXXXXSCRYNSEIELVTYSDDYEPVLRPNSVSYKTETVNRLSISSVPETPFVNATRSQERAAQEERVSEWLWTLHRIVVDVVRTDSNLEFYEDKRNVARMSDILAVYAWVDRATGYCQGMSDLLSPFVVIFEDNADAFWCFEMLIRRMRENFQMEGPTGVMKQLQALWHILELTDREIFIHLSKIGAESLHFAFPMLLVLFRRELSFNDALCMWEV 5116
            YGKAAVAAAAGAVNIHRVGSIVRDIGDPCLSQSPIKANKMLKPEKWQAAFDNEGKVVDFHKVLKLIILGGVDPSIRSEVWEFLLGCYALGSTAD+RRQLR ARR+ Y DLI+QCQ+MHSSIGTGSLAYPVGSKVMDMR+ SK     E+KV+ R+ASTD TD RE+ S LG+NC++ LY DQ     +  D+ SVR NA +AA+DSC   TS PCG  S K   DCNGSDF T  DFDFPPLP+TDLFEK+ED+KEFDANE   +A+YK+  EDDNMHSFQINNNADLIMESNV  SLSK++S  YNSEIELV   D YEPVLR N VS+K ETVNRL I  VP+T  VNA+ SQE  A +E VSEWLWTLH IVVDVVRTDSNLEFYEDKRNVARMSDILAVYAWVDRATGYCQGMSDLLSPFVVIFEDNADAFWCFEMLIRRMRENFQMEGPTGVMKQLQALWHILELTDREIFIHLSKIGAESLHFAFPMLLVLFRRELSFNDALCMWE+
Sbjct:   12 YGKAAVAAAAGAVNIHRVGSIVRDIGDPCLSQSPIKANKMLKPEKWQAAFDNEGKVVDFHKVLKLIILGGVDPSIRSEVWEFLLGCYALGSTADYRRQLRTARRKHYNDLIQQCQSMHSSIGTGSLAYPVGSKVMDMRSASKDEQRRESKVDNRQASTDVTDNREEDSHLGDNCTNRLYADQGKGC-DFADIISVRGNAHTAAHDSCFLPTSGPCGRYSPKIRRDCNGSDFSTGSDFDFPPLPLTDLFEKNEDEKEFDANEGENAAKYKVTLEDDNMHSFQINNNADLIMESNVPPSLSKSISLPYNSEIELVP-PDAYEPVLRSNIVSHKAETVNRLRILDVPKTRLVNASGSQEGTAHDETVSEWLWTLHLIVVDVVRTDSNLEFYEDKRNVARMSDILAVYAWVDRATGYCQGMSDLLSPFVVIFEDNADAFWCFEMLIRRMRENFQMEGPTGVMKQLQALWHILELTDREIFIHLSKIGAESLHFAFPMLLVLFRRELSFNDALCMWEM 522

HSP 2 Score: 330.102 bits (845), Expect = 1.715e-93
Identity = 157/158 (99.37%), Postives = 158/158 (100.00%), Query Frame = -1

Query: 2797 MMWAADFDESVNCNLEKICLEALTVQVPGDSRAEDEEENTENGNHNAIGGLQFKHSLSENEGIKAASTYHFCGLTRNFWSRNDRLQICNVVSPTRKGDDDLPVFCVAAILIMNRQKLIKETRSIDDMIKIFNDKLLKVHVRRCVGTAIRLRKKYFCKV 3270
            MMWAADFDESVNCNLEKICLEALTVQVPGDSRAEDEEENTENGNHNAIGGLQFKHSLSENEGIKAASTYHFCGLTRNFWSRNDRLQICNVVSPTRKGDDDLPVFCVAAILIMNRQKLIKETRSIDDMIKIFNDKLLKVHVRRCVGTAIRLRKKYFCK+
Sbjct:  522 MMWAADFDESVNCNLEKICLEALTVQVPGDSRAEDEEENTENGNHNAIGGLQFKHSLSENEGIKAASTYHFCGLTRNFWSRNDRLQICNVVSPTRKGDDDLPVFCVAAILIMNRQKLIKETRSIDDMIKIFNDKLLKVHVRRCVGTAIRLRKKYFCKL 679

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BLAST of g.raimondii_cottongen_reftransV1_0001186 vs. ExPASy TrEMBL
Match: A0A0D2NBN6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G126100 PE=4 SV=1)

HSP 1 Score: 777.704 bits (2007), Expect = 0.000e+0
Identity = 418/513 (81.48%), Postives = 447/513 (87.13%), Query Frame = -3

Query: 3593 YGKXXXXXXXXXVNIHRVGSIVRDIGDPCLSQSPIKANKMLKPEKWQAAFDNEGKVVDFHKVLKLIILGGVDPSIRSEVWEFLLGCYALGSTADHRRQLRIARRERYKDLIKQCQTMHSSIGTGSLAYPVGSKVMDMRTPSK-----EAKVECREASTDDTDKREKYSDLGNNCSDSLYVDQRVNVSNSGDLTSVRRNXXXXXXXXXXXXXSVPCGPCSSKRGGDCNGSDFITECDFDFPPLPVTDLFEKSEDKKEFDANEEVYSAQYKLMFEDDNMHSFQINNNADLIMEXXXXXXXXXXXSCRYNSEIELVTYSDDYEPVLRPNSVSYKTETVNRLSISSVPETPFVNATRSQERAAQEERVSEWLWTLHRIVVDVVRTDSNLEFYEDKRNVARMSDILAVYAWVDRATGYCQGMSDLLSPFVVIFEDNADAFWCFEMLIRRMRENFQMEGPTGVMKQLQALWHILELTDREIFIHLSKIGAESLHFAFPMLLVLFRRELSFNDALCMWEV 5116
            YGKAAVAAAAGAVNIHRVGSIVRDIGDPCLSQSPIKANKMLKPEKWQAAFDNEGKVVDFHKVLKLIILGGVDPSIRSEVWEFLLGCYALGSTAD+RRQLR ARR+ Y DLI+QCQ+MHSSIGTGSLAYPVGSKVMDMR+ SK     E+KV+ R+ASTD TD RE+ S LG+NC++ LY DQ     +  D+ SVR NA +AA+DSC   TS PCG  S K   DCNGSDF T  DFDFPPLP+TDLFEK+ED+KEFDANE   +A+YK+  EDDNMHSFQINNNADLIMESNV  SLSK++S  YNSEIELV   D YEPVLR N VS+K ETVNRL I  VP+T  VNA+ SQE  A +E VSEWLWTLH IVVDVVRTDSNLEFYEDKRNVARMSDILAVYAWVDRATGYCQGMSDLLSPFVVIFEDNADAFWCFEMLIRRMRENFQMEGPTGVMKQLQALWHILELTDREIFIHLSKIGAESLHFAFPMLLVLFRRELSFNDALCMWE+
Sbjct:   12 YGKAAVAAAAGAVNIHRVGSIVRDIGDPCLSQSPIKANKMLKPEKWQAAFDNEGKVVDFHKVLKLIILGGVDPSIRSEVWEFLLGCYALGSTADYRRQLRTARRKHYNDLIQQCQSMHSSIGTGSLAYPVGSKVMDMRSASKDEQRRESKVDNRQASTDVTDNREEDSHLGDNCTNRLYADQGKGC-DFADIISVRGNAHTAAHDSCFLPTSGPCGRYSPKIRRDCNGSDFSTGSDFDFPPLPLTDLFEKNEDEKEFDANEGENAAKYKVTLEDDNMHSFQINNNADLIMESNVPPSLSKSISLPYNSEIELVP-PDAYEPVLRSNIVSHKAETVNRLRILDVPKTRLVNASGSQEGTAHDETVSEWLWTLHLIVVDVVRTDSNLEFYEDKRNVARMSDILAVYAWVDRATGYCQGMSDLLSPFVVIFEDNADAFWCFEMLIRRMRENFQMEGPTGVMKQLQALWHILELTDREIFIHLSKIGAESLHFAFPMLLVLFRRELSFNDALCMWEM 522

HSP 2 Score: 463.381 bits (1191), Expect = 6.503e-140
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = -1

Query: 2611 MMWAADFDESVNCNLEKICLEALTVQVPGDSRAEDEEENTENGNHNAIGGLQFKHSLSENEGIKAASTYHFCGLTRNFWSRNDRLQICNVVSPTRKGDDDLPVFCVAAILIMNRQKLIKETRSIDDMIKIFNDKLLKVHVRRCVGTAIRLRKKYFCKVSNCIIFLLWKYEREVKCKFNPFLCFAVNPPTFCFFLLLSLMTVQRHCHFGNFNTAMVLELVK 3270
            MMWAADFDESVNCNLEKICLEALTVQVPGDSRAEDEEENTENGNHNAIGGLQFKHSLSENEGIKAASTYHFCGLTRNFWSRNDRLQICNVVSPTRKGDDDLPVFCVAAILIMNRQKLIKETRSIDDMIKIFNDKLLKVHVRRCVGTAIRLRKKYFCKVSNCIIFLLWKYEREVKCKFNPFLCFAVNPPTFCFFLLLSLMTVQRHCHFGNFNTAMVLELVK
Sbjct:  522 MMWAADFDESVNCNLEKICLEALTVQVPGDSRAEDEEENTENGNHNAIGGLQFKHSLSENEGIKAASTYHFCGLTRNFWSRNDRLQICNVVSPTRKGDDDLPVFCVAAILIMNRQKLIKETRSIDDMIKIFNDKLLKVHVRRCVGTAIRLRKKYFCKVSNCIIFLLWKYEREVKCKFNPFLCFAVNPPTFCFFLLLSLMTVQRHCHFGNFNTAMVLELVK 741

[Close]

BLAST of g.raimondii_cottongen_reftransV1_0001186 vs. ExPASy TrEMBL
Match: A0A0B0PM25_GOSAR (TBC1 domain family member 15 OS=Gossypium arboreum GN=F383_13451 PE=4 SV=1)

HSP 1 Score: 761.14 bits (1964), Expect = 0.000e+0
Identity = 410/513 (79.92%), Postives = 440/513 (85.77%), Query Frame = -3

Query: 3593 YGKXXXXXXXXXVNIHRVGSIVRDIGDPCLSQSPIKANKMLKPEKWQAAFDNEGKVVDFHKVLKLIILGGVDPSIRSEVWEFLLGCYALGSTADHRRQLRIARRERYKDLIKQCQTMHSSIGTGSLAYPVGSKVMDMRTPSK-----EAKVECREASTDDTDKREKYSDLGNNCSDSLYVDQRVNVSNSGDLTSVRRNXXXXXXXXXXXXXSVPCGPCSSKRGGDCNGSDFITECDFDFPPLPVTDLFEKSEDKKEFDANEEVYSAQYKLMFEDDNMHSFQINNNADLIMEXXXXXXXXXXXSCRYNSEIELVTYSDDYEPVLRPNSVSYKTETVNRLSISSVPETPFVNATRSQERAAQEERVSEWLWTLHRIVVDVVRTDSNLEFYEDKRNVARMSDILAVYAWVDRATGYCQGMSDLLSPFVVIFEDNADAFWCFEMLIRRMRENFQMEGPTGVMKQLQALWHILELTDREIFIHLSKIGAESLHFAFPMLLVLFRRELSFNDALCMWEV 5116
            YGKAAVAAAAGAVNIHRVGSIVRDIGDPCLSQSPIKANKMLKPEKWQAAFDNEGKVVDFHKVLKLIILGGVDPSIRSEVWEFLLGCYALGSTAD+RRQLR ARR+ Y DL++QCQ+MHSSIGTGSLAYPVGSKVMDMR+ SK     E+KV+ R+ASTDDTD RE+ SDLG+NC++ LY DQ     +  D+ SVR NA +AA+DSC   TS P G  S K   DCNGSDF T  DFDFPPLP+TDLFEK+ED+KEFDANE   +A YK+  EDDNMHSFQINNNADLIMES V  SLSK++S  YNSEIELV   D YEPVLR N  S+K ETVNRL IS VP++  VNA+ SQE  A +E VSEWLWTLHRIVVDVVRTDSNLEFYEDKRNVARMSDILAVYAWVD ATGYCQGMSDLLSPFVVIFEDNADAFWCFEMLIRRM     MEGPTGVMKQLQALWHILELTDREIF HLSKIGAESLHFAFPMLLVLFRRELSFNDALCMWE+
Sbjct:   12 YGKAAVAAAAGAVNIHRVGSIVRDIGDPCLSQSPIKANKMLKPEKWQAAFDNEGKVVDFHKVLKLIILGGVDPSIRSEVWEFLLGCYALGSTADYRRQLRTARRKHYNDLLQQCQSMHSSIGTGSLAYPVGSKVMDMRSASKDEQRRESKVDNRQASTDDTDNREEDSDLGDNCTNRLYADQGKGC-DFADIISVRGNAHTAAHDSCFLPTSGPSGRSSPKIRRDCNGSDFSTGSDFDFPPLPLTDLFEKNEDEKEFDANEGENAAIYKVTLEDDNMHSFQINNNADLIMESKVPPSLSKSISLPYNSEIELVP-PDAYEPVLRSNIASHKAETVNRLRISDVPKSQLVNASGSQEGTAHDETVSEWLWTLHRIVVDVVRTDSNLEFYEDKRNVARMSDILAVYAWVDPATGYCQGMSDLLSPFVVIFEDNADAFWCFEMLIRRM-----MEGPTGVMKQLQALWHILELTDREIFTHLSKIGAESLHFAFPMLLVLFRRELSFNDALCMWEM 517

HSP 2 Score: 318.931 bits (816), Expect = 1.176e-89
Identity = 152/158 (96.20%), Postives = 154/158 (97.47%), Query Frame = -1

Query: 2797 MMWAADFDESVNCNLEKICLEALTVQVPGDSRAEDEEENTENGNHNAIGGLQFKHSLSENEGIKAASTYHFCGLTRNFWSRNDRLQICNVVSPTRKGDDDLPVFCVAAILIMNRQKLIKETRSIDDMIKIFNDKLLKVHVRRCVGTAIRLRKKYFCKV 3270
            MMWAADFDESVNCNLEKICLEALT+QVPGDS AEDEEENTENGN NAIGGLQFKHSLSENEGIKAA TYHFCGLTRNFWSRNDRLQICNVVSPTRKGDDDLPVFCVA ILIMNRQKLIKETRSIDDMIKIFNDKLLKVHVRRCVGTAIRLRKKYFCK+
Sbjct:  517 MMWAADFDESVNCNLEKICLEALTIQVPGDSGAEDEEENTENGNDNAIGGLQFKHSLSENEGIKAALTYHFCGLTRNFWSRNDRLQICNVVSPTRKGDDDLPVFCVATILIMNRQKLIKETRSIDDMIKIFNDKLLKVHVRRCVGTAIRLRKKYFCKL 674

[Close]

BLAST of g.raimondii_cottongen_reftransV1_0001186 vs. ExPASy Swiss-Prot
Match: PER70_ARATH (Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.997e-28
Identity = 75/179 (41.90%), Postives = 90/179 (50.28%), Query Frame = 2

Query:  176 CDNAEAYIRHQVESFYKYDKTIAPKLLRLLYADCFVNGCDASVLLDGPNSEKTAPQNRGLAGFAFIDKIKTVLEARCPGVVSCADILNLATRDAVHLVCIYLIFLIIK*ISRVFVSYKSLIHII*IQAGAPSYPVYTGRRDGMTSTKDSVDLPSPSISWEASLTYFRSRGLDVLDMTTL 712
            C N E+ +R  VES Y  +   AP +LR+ + DCFV GCDASVLL GPNSE+TA  N  L GF  I++ KT LE  CP  VSCADIL LA RD VHL                              AG P +PV  GR DG  S   +V LP P+ S       F  + L+  D+  L
Sbjct:   43 CWNVESIVRSVVESNYLANPANAPGILRMHFHDCFVQGCDASVLLAGPNSERTAIPNLSLRGFNVIEEAKTQLEIACPRTVSCADILALAARDFVHL------------------------------AGGPWWPVPLGRLDGRISLASNVILPGPTDSVAVQKLRFAEKNLNTQDLVVL 191

HSP 2 Score: 80.1073 bits (196), Expect = 1.976e-14
Identity = 46/141 (32.62%), Postives = 71/141 (50.35%), Query Frame = 2

Query: 1067 LSGAHSMGRTHCSFIVDRLYNFNDTGKPDPSMKASLLEEMRKLCPPKTKKGQPDPLIFLNPASGSKYSFINSYYSRVLTNEAVLGVDQQLLYNEDTKQITEEFAA---GFEDFRRSFALSMSRMGNINVLTGKEGEIRKNC 1480
            L+  H++G   C    DR +N+++TG PDP++  S +  ++  CP     G P   + L+  SG +  F  SY + +     +L  DQ L  N +T+ I E        F  F   FA SM++M  I + TG +GEIR+ C
Sbjct:  191 LAAGHTIGTAGCIVFRDRFFNYDNTGSPDPTIAPSFVPLIQAQCP---LNGDPATRVVLDTGSGDQ--FDTSYLNNLKNGRGLLESDQVLWTNLETRPIVERLLGLRFPFLIFGLEFARSMTKMSQIEIKTGLDGEIRRVC 326

[Close]

BLAST of g.raimondii_cottongen_reftransV1_0001186 vs. ExPASy Swiss-Prot
Match: PER18_ARATH (Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 2.892e-28
Identity = 71/194 (36.60%), Postives = 98/194 (50.52%), Query Frame = 2

Query:  143 LVWHYYKVHNTCDNAEAYIRHQVESFYKYDKTIAPKLLRLLYADCFVNGCDASVLLDGPNSEKTAPQNRGLAGFAFIDKIKTVLEARCPGVVSCADILNLATRDAVHLVCIYLIFLIIK*ISRVFVSYKSLIHII*IQAGAPSYPVYTGRRDGMTSTKDSV--DLPSPSISWEASLTYFRSRGLDVLDMTTLLG 718
            L +++Y    +C  AE  +R+ V S    D ++  KLLRL++ DCFV GCD SVL+ G  +E++ P N  L GFA I+ +K +LE  CPG VSCADIL LA RDAV  +                              G P  P+ TGRRDG  S   +V  ++     + +  +  F S+GL V D+  L G
Sbjct:   31 LSFNFYA--GSCPGAELIVRNTVRSASSSDPSVLGKLLRLIFHDCFVQGCDGSVLIRGNGTERSDPGNASLGGFAVIESVKNILEIFCPGTVSCADILVLAARDAVEAL------------------------------GGPVVPIPTGRRDGRVSMAANVRPNIIDTDFTVDKMINIFSSKGLSVHDLVVLSG 192

HSP 2 Score: 56.9954 bits (136), Expect = 7.501e-7
Identity = 41/144 (28.47%), Postives = 65/144 (45.14%), Query Frame = 2

Query: 1067 LSGAHSMGRTHCSFIVDRLYNFNDTGKPDPSMKASLLEE------MRKLCPPKTKKGQPDPLIFLNPASGSKYSFINSYYSRVLTNEAVLGVDQQLLYNEDTKQITEEFAAGFEDFRRSFALSMSRMGNINVLTGKEGEIRKNC 1480
            LSGAH++G  HC+        FN   K DP     L++        + L    +    P   +  N    S  +F N YY  +L ++ +   D  L+ ++ T++I E  A   E F   +  S  +M  + V  G+EGEIR++C
Sbjct:  190 LSGAHTIGAAHCN-------TFNSRFKLDPKGNLELIDASLDNSYAQTLVNKCSSSLDPTTTVVDNDPETSS-TFDNQYYKNLLAHKGLFQTDSALMEDDRTRKIVEILANDQESFFDRWTESFLKMSLMGVRVGEEGEIRRSC 325

[Close]

BLAST of g.raimondii_cottongen_reftransV1_0001186 vs. ExPASy Swiss-Prot
Match: PER46_ARATH (Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 3.326e-28
Identity = 73/200 (36.50%), Postives = 99/200 (49.50%), Query Frame = 2

Query:  125 LQTPVNLVWHYYKVHNTCDNAEAYIRHQVESFYKYDKTIAPKLLRLLYADCFVNGCDASVLLDGPNSEKTAPQNRGLAGFAFIDKIKTVLEARCPGVVSCADILNLATRDAVHLVCIYLIFLIIK*ISRVFVSYKSLIHII*IQAGAPSYPVYTGRRDGMTSTKDSV--DLPSPSISWEASLTYFRSRGLDVLDMTTLLG 718
            L +  NL +++Y   ++C  AE  +R+ V S    D TI  KLLRL + DCFV GCDASVL+ G ++EK+ P N  L GF+ ID  K  +E  CP  VSCADI+ LA RDAV                                AG P   + TGRRDG  S   +V  ++     + +  +  F S+GL + D+  L G
Sbjct:   23 LTSSANLSFNFYA--SSCSVAEFLVRNTVRSATSSDPTIPGKLLRLFFHDCFVQGCDASVLIQGNSTEKSDPGNASLGGFSVIDTAKNAIENLCPATVSCADIVALAARDAVE------------------------------AAGGPVVEIPTGRRDGKESMAANVRPNIIDTDFTLDQMIDAFSSKGLSIQDLVVLSG 190

[Close]

BLAST of g.raimondii_cottongen_reftransV1_0001186 vs. ExPASy Swiss-Prot
Match: PER71_ARATH (Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 4.547e-28
Identity = 72/183 (39.34%), Postives = 91/183 (49.73%), Query Frame = 2

Query:  173 TCDNAEAYIRHQVESFYKYDKTIAPKLLRLLYADCFVNGCDASVLLDGPNSEKTAPQNRGLAGFAFIDKIKTVLEARCPGVVSCADILNLATRDAVHLVCIYLIFLIIK*ISRVFVSYKSLIHII*IQAGAPSYPVYTGRRDGMTS-TKDSVDLPSPSISWEASLTYFRSRGLDVLDMTTLLG 718
            TC  AE  +R+ V + +  D  IAP +LR+ + DCFV GCD S+L+ G N+E+TA  N  L GF  ID  KT LEA CPGVVSCADIL LA RD V                              I      + V TGRRDG  S   ++ +LP P  S       F + GL+  D+  L+G
Sbjct:   43 TCPRAETIVRNAVNAGFSSDPRIAPGILRMHFHDCFVQGCDGSILISGANTERTAGPNLNLQGFEVIDNAKTQLEAACPGVVSCADILALAARDTV------------------------------ILTQGTGWQVPTGRRDGRVSLASNANNLPGPRDSVAVQQQKFSALGLNTRDLVVLVG 195

HSP 2 Score: 79.7221 bits (195), Expect = 2.611e-14
Identity = 49/139 (35.25%), Postives = 71/139 (51.08%), Query Frame = 2

Query: 1067 LSGAHSMGRTHCSFIVDRLYNFNDTGKP-DPSMKASLLEEMRKLCPPKTKKGQPDPLIFLNPASGSKYSFINSYYSRVLTNEAVLGVDQQLLYNEDTKQITEEFAAGFEDFRRSFALSMSRMGNINVLTGKEGEIRKNC 1480
            L G H++G   C    +RL  FN TG+  DP++  + L +++  CP   + G     + L+  SGS +    SYY+ +     VL  DQ L  +  T+ I ++  A    F   FA SM RM NI V+TG  GEIR+ C
Sbjct:  193 LVGGHTIGTAGCGVFRNRL--FNTTGQTADPTIDPTFLAQLQTQCP---QNGDGSVRVDLDTGSGSTWD--TSYYNNLSRGRGVLQSDQVLWTDPATRPIVQQLMAPRSTFNVEFARSMVRMSNIGVVTGANGEIRRVC 324

[Close]

BLAST of g.raimondii_cottongen_reftransV1_0001186 vs. ExPASy Swiss-Prot
Match: PER36_ARATH (Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=2 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 1.425e-27
Identity = 81/229 (35.37%), Postives = 116/229 (50.66%), Query Frame = 2

Query:   59 GFALAVLSLWCSMEVAV--EAAWSLQTPVNLVWHYYKVHNTCDNAEAYIRHQVESFYKYDKTIAPKLLRLLYADCFVNGCDASVLLDGPN---SEKTAPQNRGLA-GFAFIDKIKTVLEARCPGVVSCADILNLATRDAVHLVCIYLIFLIIK*ISRVFVSYKSLIHII*IQAGAPSYPVYTGRRDGMTST--KDSVDLPSPSISWEASLTYFRSRGLDVLDMTTLLGK 721
            G  L+ +SL     + +  +   S  +  +L   +Y+  N+C NA+A ++  V + Y  D  +A  +LRL + DCFVNGCDASVLLD      SEK +  NR  A GF  ID+IK+ LE  CP  VSCAD+L L  RD++ ++C                             G PS+ VY GRRD   ++      ++PSP  + +  LT F  +GLD+ D+  LLG 
Sbjct:   11 GIVLSQISLVALFPLCICYQTHQSTSSVASLSPQFYE--NSCPNAQAIVQSYVANAYFNDPRMAASILRLHFHDCFVNGCDASVLLDSSGTMESEKRSNANRDSARGFEVIDEIKSALENECPETVSCADLLALVARDSI-VIC-----------------------------GGPSWEVYLGRRDAREASLIGSMENIPSPESTLQTILTMFNFQGLDLTDLVALLGS 207

HSP 2 Score: 70.8626 bits (172), Expect = 2.882e-11
Identity = 45/143 (31.47%), Postives = 70/143 (48.95%), Query Frame = 2

Query: 1067 LSGAHSMGRTHCSFIVDRLYNFNDTGKPDPSMKASLLEEMRKLCPPKTKKGQPDPLIFLNPASGSKYSFINSYYSRVLTNEAVLGVDQQLLYNE-DTKQITEEFAAGFEDFRRSFALSMSRMGNINVLTGKEGEIRKNCRFPN 1492
            L G+H++G + C     RLYN      PD ++       +++ CP     G    L  L+  + +K  F N YY  ++    +L  D+ L     +T ++ + +A     F   FA SM +MGNI+ LTG +GEIR+ CR  N
Sbjct:  204 LLGSHTIGNSRCIGFRQRLYNHTGNNDPDQTLNQDYASMLQQGCP---ISGNDQNLFNLDYVTPTK--FDNYYYKNLVNFRGLLSSDEILFTQSIETMEMVKYYAENEGAFFEQFAKSMVKMGNISPLTGTDGEIRRICRRVN 341

[Close]

BLAST of g.raimondii_cottongen_reftransV1_0001186 vs. ExPASy Swiss-Prot
Match: PERN1_TOBAC (Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.944e-27
Identity = 71/184 (38.59%), Postives = 102/184 (55.43%), Query Frame = 2

Query:  170 NTCDNAEAYIRHQVESFYKYDKTIAPKLLRLLYADCFVNGCDASVLLDGPNSEKTAPQNRGLAGFAFIDKIKTVLEARCPGVVSCADILNLATRDAVHLVCIYLIFLIIK*ISRVFVSYKSLIHII*IQAGAPSYPVYTGRRDGMTS-TKDSVDLPSPSISWEASLTYFRSRGLDVLDMTTLLG 718
            +TC  AE+ ++  V + ++ D T+AP +LR+ + DCFV GCD S+L++G ++E+TA  NR L GF  I+  KT +EA CPGVVSCADIL LA RD+V                   V+ + L           ++ V TGRRDG  S   D+ DLP+   S +     F ++GL+  D+  L G
Sbjct:   39 STCPRAESIVQSTVRAHFQSDPTVAPGILRMHFHDCFVLGCDGSILIEGSDAERTAIPNRNLKGFDVIEDAKTQIEAICPGVVSCADILALAARDSV-------------------VATRGL-----------TWSVPTGRRDGRVSRAADAGDLPAFFDSVDIQKRKFLTKGLNTQDLVALTG 192

HSP 2 Score: 99.3673 bits (246), Expect = 1.469e-20
Identity = 57/143 (39.86%), Postives = 78/143 (54.55%), Query Frame = 2

Query: 1067 LSGAHSMGRTHCSFIVDRLYNFNDTGKPDPSMKASLLEEMRKLCPPKTKKGQPDPLIFLNPASGSKYSFINSYYSRVLTNEAVLGVDQQLLYNEDTKQITEEFAA-----GFEDFRRSFALSMSRMGNINVLTGKEGEIRKNC 1480
            L+GAH++G   C+ I DRL+NFN TG PDPS+ A+ L ++R LCP   + G     + L+  +GS  +F  SY+S +     VL  DQ+L  +  T+   + F       G   F   F  SM +M NI V TG  GEIRK C
Sbjct:  190 LTGAHTIGTAGCAVIRDRLFNFNSTGGPDPSIDATFLPQLRALCP---QNGDASRRVGLD--TGSVNNFDTSYFSNLRNGRGVLESDQKLWTDASTQVFVQRFLGIRGLLGLT-FGVEFGRSMVKMSNIEVKTGTNGEIRKVC 326

[Close]

BLAST of g.raimondii_cottongen_reftransV1_0001186 vs. ExPASy Swiss-Prot
Match: PER24_ARATH (Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 3.215e-27
Identity = 80/198 (40.40%), Postives = 103/198 (52.02%), Query Frame = 2

Query:  143 LVWHYYKVHNTCDNAEAYIRHQVESFYKYDKTIAPKLLRLLYADCFVNGCDASVLLDG----PNSEKTAPQNRGLAGFAFIDKIKTVLEARCPGVVSCADILNLATRDAVHLVCIYLIFLIIK*ISRVFVSYKSLIHII*IQAGAPSYPVYTGRRDGMTS--TKDSVDLPSPSISWEASLTYFRSRGLDVLDMTTLLG 718
            L  ++Y  HN+C  AE  +R  V    + ++++APKLLR+ Y DCFV GCDAS+LLD       SEK A  N  L+GF  ID+IK +LE RCP  VSCADIL LA RDAV                    SY         +   P + V+TGR DG  S  T+ + DLPS   ++      F    LDV+D+  L G
Sbjct:   46 LKMNFY--HNSCPGAEDIVRQIVWKKVEANRSLAPKLLRVHYHDCFVRGCDASLLLDSVAGKAVSEKEARPNLSLSGFEIIDEIKYILEKRCPNTVSCADILTLAARDAV--------------------SY---------EFERPLWNVFTGRVDGRVSLATEAARDLPSAGANFTTLQKLFAESDLDVVDLVALSG 212

HSP 2 Score: 78.1814 bits (191), Expect = 1.240e-13
Identity = 48/144 (33.33%), Postives = 69/144 (47.92%), Query Frame = 2

Query: 1067 LSGAHSMGRTHCSFIVDRLYNFNDTGKPDPSMKASLLEEMRKLCPPKTKKGQPDPLIFLNPASGSKYSFINSYYSRVLTNEAVLGVDQQLLYNEDTKQITEEFAAGFEDFRRSFALSMSRMGNINVLT--GKEGEIRKNCRFPN 1492
            LSGAH++G  HC     RL NF   G  DPS+  S    ++  C  K+ +  P  ++ ++P      +F + Y+  +L N+ +   D  LL +     I   F      F   F  SM +M +I VLT   + GEIRKNCR  N
Sbjct:  210 LSGAHTIGIAHCGVFGRRLLNFTGKGDTDPSLNPSYASFLKSECSDKSLRLNPSAVVGMDPT--GPLAFDSGYFVSLLKNKGLFTSDAALLTDPSAAHIASVFQNSGA-FLAQFGRSMIKMSSIKVLTLGDQGGEIRKNCRLVN 350

[Close]

BLAST of g.raimondii_cottongen_reftransV1_0001186 vs. ExPASy Swiss-Prot
Match: PER3_ARATH (Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 9.593e-27
Identity = 75/219 (34.25%), Postives = 114/219 (52.05%), Query Frame = 2

Query:   83 LWCSMEVAVEAAWSLQTPVNLVWHYYKVH---NTCDNAEAYIRHQVESFYKYDKTIAPKLLRLLYADCFVNGCDASVLLDGP--NSEKTAPQNRGLAGFAFIDKIKTVLEARCPGVVSCADILNLATRDAVHLVCIYLIFLIIK*ISRVFVSYKSLIHII*IQAGAPSYPVYTGRRDGMTSTKDS--VDLPSPSISWEASLTYFRSRGLDVLDMTTLLG 718
            + C + +A+  ++ L   V  +    +++   N+C NAE  ++  V +      ++A  L+R+ + DCFV GCD SVL++    N+E+ A  N  + GF FID IK+VLEA+CPG+VSCADI+ LA+RDAV                 VF              G P++ V TGRRDG  S       ++P P+ +     T F ++GLD+ D+  L G
Sbjct:    1 MNCLIAIALSVSFFLVGIVGPIQAQLQMNFYANSCPNAEKIVQDFVSNHVSNAPSLAAALIRMHFHDCFVRGCDGSVLINSTSGNAERDATPNLTVRGFGFIDAIKSVLEAQCPGIVSCADIIALASRDAV-----------------VFT-------------GGPNWSVPTGRRDGRISNAAEALANIPPPTSNITNLQTLFANQGLDLKDLVLLSG 189

HSP 2 Score: 82.8037 bits (203), Expect = 2.714e-15
Identity = 49/146 (33.56%), Postives = 69/146 (47.26%), Query Frame = 2

Query: 1064 FLSGAHSMGRTHCSFIVDRLYNFNDTGKPDPSMKASLLEEMR-KLCPPKTKKGQPDPLIFLNPASGSKYSFINSYYSRVLTNEAVLGVDQQLLYNEDT-KQITEEFAAGFEDFRRSFALSMSRMGNINVLTGKEGEIRKNCRFPNK 1495
             LSGAH++G +HCS   +RLYNF   G  DP++ +     ++ + CP          ++ ++P  GS+ +F  SYY  VL    +   D  L  N  T   I          F   FA SM +MG INV TG  G +R+ C   N 
Sbjct:  186 LLSGAHTIGVSHCSSFTNRLYNFTGRGGQDPALDSEYAANLKSRKCPSLNDN---KTIVEMDP--GSRKTFDLSYYQLVLKRRGLFQSDSALTTNPTTLSNINRILTGSVGSFFSEFAKSMEKMGRINVKTGSAGVVRRQCSVANS 326

[Close]

BLAST of g.raimondii_cottongen_reftransV1_0001186 vs. ExPASy Swiss-Prot
Match: PER69_ARATH (Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.272e-26
Identity = 72/183 (39.34%), Postives = 90/183 (49.18%), Query Frame = 2

Query:  170 NTCDNAEAYIRHQVESFYKYDKTIAPKLLRLLYADCFVNGCDASVLLDGPNSEKTAPQNRGLAGFAFIDKIKTVLEARCPGVVSCADILNLATRDAVHLVCIYLIFLIIK*ISRVFVSYKSLIHII*IQAGAPSYPVYTGRRDGMTSTKDSVDLPSPSISWEASLTYFRSRGLDVLDMTTLLG 718
            N C N E+ +R  V+S  +     AP +LR+ + DCFV+GCD SVLL G  SE+TA  NR L GF  I++ K  LE  CP  VSCADIL LA RDAV L                               G   + V  GR DG  S    V+LP PS S       F ++ L+ LD+ TL+G
Sbjct:   44 NRCRNVESIVRSVVQSHVRSIPANAPGILRMHFHDCFVHGCDGSVLLAGNTSERTAVPNRSLRGFEVIEEAKARLEKACPRTVSCADILTLAARDAVVL------------------------------TGGQRWEVPLGRLDGRISQASDVNLPGPSDSVAKQKQDFAAKTLNTLDLVTLVG 196

HSP 2 Score: 68.9366 bits (167), Expect = 9.810e-11
Identity = 44/141 (31.21%), Postives = 62/141 (43.97%), Query Frame = 2

Query: 1067 LSGAHSMGRTHCSFIVDRLYNFNDTGKPDPSMKASLLEEMRKLCPPKTKKGQPDPLIFLNPASGSKYSFINSYYSRVLTNEAVLGVDQQLLYNEDTKQITEEFAAGFE---DFRRSFALSMSRMGNINVLTGKEGEIRKNC 1480
            L G H++G   C  +  R  NFN TG+PDPS+  S +  +   CP             +    GS   F  S+  +V ++  VL  D  L  + +T+ I E           F   F  SM +M  I V TG +GEIR+ C
Sbjct:  194 LVGGHTIGTAGCGLVRGRFVNFNGTGQPDPSIDPSFVPLILAQCPQNGGT-------RVELDEGSVDKFDTSFLRKVTSSRVVLQSDLVLWKDPETRAIIERLLGLRRPSLRFGTEFGKSMVKMSLIEVKTGSDGEIRRVC 327

[Close]

BLAST of g.raimondii_cottongen_reftransV1_0001186 vs. ExPASy Swiss-Prot
Match: PER55_ARATH (Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.548e-26
Identity = 75/203 (36.95%), Postives = 98/203 (48.28%), Query Frame = 2

Query:  128 QTPVNLVWHYYKVHNTCDNAEAYIRHQVESFYKYDKTIAPKLLRLLYADCFVNGCDASVLLDGPN--SEKTAPQNRGLAGFAF--IDKIKTVLEARCPGVVSCADILNLATRDAVHLVCIYLIFLIIK*ISRVFVSYKSLIHII*IQAGAPSYPVYTGRRDGMTSTKDSV--DLPSPSISWEASLTYFRSRGLDVLDMTTLLG 718
            ++   L  +YY   +TC + E  ++  V + +K   T AP  LR+ + DCFV GCDASV +   N  +EK A  N+ LAG  F  + K KT +E++CPGVVSCADIL LA RD V LV                              G P + V  GRRDG+ S    V   LP P +     +  F S GL + DM  L G
Sbjct:   27 ESNAQLSENYYA--STCPSVELIVKQAVTTKFKQTVTTAPATLRMFFHDCFVEGCDASVFIASENEDAEKDADDNKSLAGDGFDTVIKAKTAVESQCPGVVSCADILALAARDVVVLV------------------------------GGPEFKVELGRRDGLVSKASRVTGKLPEPGLDVRGLVQIFASNGLSLTDMIALSG 197

HSP 2 Score: 81.6481 bits (200), Expect = 5.827e-15
Identity = 41/138 (29.71%), Postives = 74/138 (53.62%), Query Frame = 2

Query: 1067 LSGAHSMGRTHCSFIVDRLYNFNDTGKPDPSMKASLLEEMRKLCPPKTKKGQPDPLIFLNPASGSKYSFINSYYSRVLTNEAVLGVDQQLLYNEDTKQITEEFAAGFEDFRRSFALSMSRMGNINVLTGKEGEIRKNC 1480
            LSGAH++G +HC+   +RL+NF+     DP+M     +++ + C        P+P   ++    S+ +F NSYY  ++  + +   DQ L  +  ++     FA   E+F  +F+ +M  +G + V  G +GEIR++C
Sbjct:  195 LSGAHTIGSSHCNRFANRLHNFSTFMPVDPTMDPVYAQQLIQAC------SDPNPDAVVDIDLTSRDTFDNSYYQNLVARKGLFTSDQALFNDLSSQATVVRFANNAEEFYSAFSSAMRNLGRVGVKVGNQGEIRRDC 326

The following BLAST results are available for this feature:

BLAST of g.raimondii_cottongen_reftransV1_0001186 vs. ExPASy TrEMBL
BLAST of g.raimondii_cottongen_reftransV1_0001186 vs. ExPASy Swiss-Prot

BLAST of g.raimondii_cottongen_reftransV1_0001186 vs. ExPASy TrEMBL
Analysis Date: 2016-11-09 (Homology Analysis for Gossypium raimondii CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
A0A0D2RM27_GOSRA	2.426e-61	93.74	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0D2T7R1_GOSRA	2.472e-61	93.17	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0B0PW43_GOSAR	4.233e-61	90.85	Tbc1d15 OS=Gossypium arboreum GN=F383_16157 PE=4 S...	[more]
A0A0B0PRJ2_GOSAR	7.673e-62	90.85	Tbc1d15 OS=Gossypium arboreum GN=F383_16157 PE=4 S...	[more]
A0A0D2RM32_GOSRA	7.269e-62	94.88	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0D2VLZ1_GOSRA	2.469e-61	94.69	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A061EIE7_THECC	4.544e-72	82.80	Ypt/Rab-GAP domain of gyp1p superfamily protein, p...	[more]
A0A0D2RDS9_GOSRA	1.715e-93	81.48	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0D2NBN6_GOSRA	6.503e-140	81.48	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0B0PM25_GOSAR	1.176e-89	79.92	TBC1 domain family member 15 OS=Gossypium arboreum...	[more]

Pages

BLAST of g.raimondii_cottongen_reftransV1_0001186 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-09 (Homology Analysis for Gossypium raimondii CottonGen RefTrans V1 vs SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
PER70_ARATH	1.997e-28	41.90	Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=...	[more]
PER18_ARATH	2.892e-28	36.60	Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=...	[more]
PER46_ARATH	3.326e-28	36.50	Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=...	[more]
PER71_ARATH	4.547e-28	39.34	Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=...	[more]
PER36_ARATH	1.425e-27	35.37	Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=...	[more]
PERN1_TOBAC	1.944e-27	38.59	Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 S...	[more]
PER24_ARATH	3.215e-27	40.40	Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=...	[more]
PER3_ARATH	9.593e-27	34.25	Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=2 ...	[more]
PER69_ARATH	1.272e-26	39.34	Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=...	[more]
PER55_ARATH	1.548e-26	36.95	Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=...	[more]

Pages

InterPro

Analysis Name: InterProScan analysis for Gossypium raimondii CottonGen RefTrans V1
Date Performed: 2016-11-09


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000195	Rab-GTPase-TBC domain	SMART	SM00164	tbc_4	coord: 28..499 e-value: 3.5E-22 score: 89.7
IPR000195	Rab-GTPase-TBC domain	PFAM	PF00566	RabGAP-TBC	coord: 308..472 e-value: 3.0E-31 score: 108.6
IPR000195	Rab-GTPase-TBC domain	PROSITE	PS50086	TBC_RABGAP	coord: 31..474 score: 28.398
IPR000195	Rab-GTPase-TBC domain	SUPERFAMILY	47923	Ypt/Rab-GAP domain of gyp1p	coord: 6..70 coord: 313..434
None	No IPR available	GENE3D	1.10.8.270		coord: 324..398 e-value: 2.4E-26 score: 91.4 coord: 23..62 e-value: 2.4E-26 score: 91.4
None	No IPR available	PANTHER	PTHR22957:SF211	RAB GTPASE ACTIVATOR PROTEIN-RELATED	coord: 1..78
None	No IPR available	PANTHER	PTHR22957	TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN	coord: 328..470 coord: 1..78
None	No IPR available	PANTHER	PTHR22957:SF211	RAB GTPASE ACTIVATOR PROTEIN-RELATED	coord: 328..470

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.raimondii_cottongen_reftransV1_0001186 ID=g.raimondii_cottongen_reftransV1_0001186; Name=g.raimondii_cottongen_reftransV1_0001186; organism=Gossypium raimondii; type=contig; length=5118bp
GTGCATATTAGGGTTTATGCTTTAAAGTGAGAAAATGAGGAGAGAAAGGT
TGGGTTTCGGTTTTGCTCTTGCAGTACTGAGCTTGTGGTGCTCAATGGAG
GTTGCGGTTGAGGCGGCATGGTCATTGCAGACTCCGGTGAACCTGGTTTG
GCATTACTATAAGGTGCATAATACATGTGATAATGCAGAGGCTTATATTA
GGCACCAAGTGGAATCGTTTTATAAGTATGATAAAACTATTGCACCTAAG
CTTCTTCGCTTGCTGTATGCGGATTGTTTTGTAAATGGATGCGATGCTTC
AGTCCTGCTAGATGGGCCGAATTCGGAGAAGACTGCACCACAGAACAGGG
GACTGGCAGGGTTCGCGTTCATCGACAAGATTAAGACGGTGCTTGAAGCT
CGTTGCCCAGGCGTTGTCTCTTGTGCTGACATTCTTAACCTCGCCACTCG
AGATGCTGTTCATTTGGTATGTATTTATTTAATTTTTCTCATCATTAAAT
AAATCTCTAGAGTATTTGTATCATATAAATCATTAATTCATATTATATAA
ATTCAGGCAGGAGCACCGTCTTATCCCGTATATACAGGGAGAAGAGACGG
GATGACATCGACCAAGGACTCCGTTGATCTCCCTTCACCATCCATCTCCT
GGGAAGCTTCTCTCACTTATTTCCGATCAAGAGGCTTGGATGTGTTGGAC
ATGACAACCCTATTAGGTAAAACACTAACACGGATACATCAACTAGTCAA
AATCTATATCTATTATTAACCTGTTAGTGTATACAAACATGTGGAATTAA
CATGAACAAGGTATGATTAAAAGCTATAGGGTGGGAGTGGAACAGAATGA
ATACTACTAATCACTTTTTTTTTCCCACTTCATTGGCAAATAGAGGAATA
AACAAACCATCAGTAATATGAACCTGGTATTTAGCTCAGTTGGTTCACAC
AACTAACCTTAAAAAGCGACTTCTAGCAGAACCGGCATTCGAACCCCAAC
ATCTGCAACTCCCTCCCCTATCCTTAGACTATGGATCCCTTTTTAATGAT
AATTTCTTGGCACTTCTTATCAGGAGCACATTCCATGGGGAGAACACACT
GCAGCTTCATTGTGGATAGGCTGTACAATTTCAATGATACAGGAAAGCCA
GATCCAAGCATGAAGGCGTCATTGTTGGAAGAAATGAGGAAGCTATGTCC
GCCAAAAACTAAAAAGGGCCAACCCGACCCGCTCATATTTCTAAACCCAG
CATCCGGATCCAAATATAGTTTCATCAACTCCTACTACTCCAGAGTGTTA
ACCAATGAAGCTGTCCTTGGAGTTGATCAGCAGCTACTCTATAACGAAGA
TACTAAGCAAATCACTGAAGAATTCGCTGCCGGGTTTGAAGATTTCAGGA
GATCATTTGCTCTTTCCATGAGTCGAATGGGAAATATCAATGTTCTAACA
GGTAAGGAAGGTGAAATACGCAAAAATTGCAGATTTCCAAACAAAAAATA
GGCGAGTCACTCGGCTCAGGGAGGAATGATTCATAAGCATAAAATTATAG
TGATGATTGTCATTGAAATGCCCAACGTCTTGGATTAAGGTATAGCATTA
ATATCATAAATATCAATAAAAAACAAAAAAATGGCAACTATTTTCTTTCC
ACAAATAAATTGTATAACTTGTTCAATCCTTCAACTAAACTGTCCTACAG
AAAAGTTAAAAGTTCAATTATCTAATAACTACACAGTATTATTTTTCTTT
CTGTAAATTCACAATTTAACATTTAGATTTTAAACTTAAATCAAATTATA
TATCGGTAAAAAGCCAGATCATGCTTGCCTAACCTGGAAGAGGTATTTTG
TGATAGATAAATGTTTACATACGTATGAACCTTGAAAAGATGGGACTTCT
TCCAACTTTCAGTCTTTTCTAGTACCTTGGAACAGACTTGAAGATAATGG
AGTGAAAAAGTAGGAAGAATCTTCGACCGCAAAGCACTTCTTCTTTATGC
TCCATTCGAGAAAGTAGGCAGGAAATGCTGTAGACCTACTGACTATGACG
ACGGGAATGCCCTTTTATCCTGATTAACTGATTACAACAAAAATTAGATT
TAATAAAGGTAACTATAAAGGAGAAACATTCAAGTGAGCAGAGAAGAGAG
TATTGTCATGCATGTCCACTGCAGTTAGCACATTTCACATGCCAACTGCC
TTAACCATAAATTACAATGCAGATAATTCATGCCATTAGTTCAACATGTT
AATGCTTTCATCCATTGCTCCAAAAGGAGAGTTGATTTGAAAGAAGAGTA
TTAATTTTGTCCAAGAACAATGTAATGCAAGGTAATGCAAAATATAGTCA
AGAAAAGCCAATGTCAAGAACACCATGTTTTGTTTTTTCCGACTATGGTC
TGTCATACAGATCACACTAAACCAATGAGTTCTATAATCAATTATAAAGA
TCACACTAGACCAGTGCTCTATTTGATATTATATTTCAGTAAACAAAGCA
AAATGCGTGCTCCTATTATTCCTGTTACTTTTACTCTTATACTCCATCTC
GACATAAGTTTTAGACATCATGTACTACCTCAAATCTGTCATTTGTGCGA
TTGGATCTCATTTTACAAGTTCTAACACCATAGCAGTATTAAAGTTTCCA
AAATGACAATGCCTTTGCACTGTCATCAGAGAGAGCAAGAGAAAGAAACA
AAAGGTTGGAGGGTTTACTGCAAAGCAGAGGAATGGGTTGAATTTACATT
TCACCTCTCGCTCATATTTCCATAAGAGGAAAATAATACAATTACTAACC
TTGCAAAAGTATTTTTTTCTTAGTCTGATTGCTGTACCTACGCACCTTCT
GACATGGACTTTTAGAAGCTTATCATTGAAAATCTTTATCATGTCATCTA
TTGAACGGGTTTCCTTGATGAGTTTCTGGCGGTTCATGATAAGAATAGCA
GCCACACAAAAGACAGGCAAATCATCATCCCCTTTCCTAGTTGGAGAGAC
AACATTGCATATTTGGAGACGATCATTTCTAGACCAAAAATTCCGGGTCA
AACCACAAAAGTGATAAGTCGATGCAGCTTTTATTCCTTCGTTCTCAGAC
AAAGAATGCTTAAATTGTAGGCCACCTATTGCATTATGATTTCCATTTTC
TGTATTTTCTTCTTCATCTTCTGCCCTAGAGTCCCCAGGAACTTGTACAG
TCAATGCCTCTAAACAGATCTTCTCTAGATTGCAATTGACAGATTCATCA
AAATCAGCTGCCCACATCATCTAAATTGGGGTCCATATTTTTAGTTCCAA
TATCAAAAGAAAGAAATGAAGTATAAAATAAAATGGAAAGAATATAAAAA
GTAAAAAATAGTTCCTGGTTTCTATGAGTTCTTGAGATTTTTACTGTTGA
TCTTGACTTCACTAACAGGCTAATATTCCATTTAAAAAAACCATTCTCAT
AAACAGCAAGTCAGAGTATGAATTGAAAAAGCTGAACTCAAAAATTAGTA
CCAGAAACTTTAGGCTCAATCTGGTGAGCATTATAATATAATAGTACCAT
AAATTGAGACAGTTGAGAGCAGTAAATGAAACTAAATGCACAGACCTCCC
ACATACAAAGAGCATCATTGAAGGATAACTCTCGGCGAAATAGAACCAGC
AGCATTGGAAATGCAAAATGAAGGCTTTCAGCACCTATCTTTGATAGATG
TATAAATATTTCCCTATCTGTGAGTTCCAAAATATGCCACAATGCTTGCA
GCTGCTTCATCACTCCAGTTGGTCCCTCCATCTGAAAATTTTCACGCATT
CTCCTAATCAACATTTCAAAGCACCAAAATGCATCTGCATTATCCTCAAA
GATAACAACAAAAGGAGATAGCAGATCACTCATACCTTGACAATAACCAG
TTGCACGATCAACCCATGCATAAACAGCAAGAATATCAGACATTCTAGCA
ACATTTCTTTTATCCTCATAGAACTCAAGATTACTATCCGTTCTCACCAC
ATCAACAACTATTCGGTGCAGAGTCCAAAGCCATTCACTTACTCTTTCTT
CTTGGGCAGCCCTTTCTTGTGATCTGGTTGCATTTACAAATGGTGTTTCT
GGGACACTTGATATGCTTAATCTGTTCACTGTTTCCGTTTTATAACTTAC
ACTGTTGGGTCTGAGGACTGGCTCATAGTCATCAGAATAGGTCACCAACT
CAATTTCAGAGTTATATCGACATGAGACATTTTTAGATAGTGAGGATGAA
ACATTTGATTCCATAATTAAATCAGCATTGTTATTGATTTGAAAACTATG
CATATTATCATCCTCAAACATCAATTTATATTGAGCAGAATACACTTCCT
CATTTGCATCAAATTCTTTCTTATCTTCACTCTTCTCAAACAAATCTGTT
ACTGGTAAGGGGGGGAAATCAAAATCACATTCAGTTATGAAATCTGACCC
ATTACAGTCTCCCCCTCTTTTTGAGGAACAAGGACCACATGGAACAGAAG
TCGATGAAGAACAAGAATCGTATGCAGCACTGTCAGCATTTCTCCTGACA
CTTGTAAGGTCACCAGAATTACTAACATTCACTCTTTGGTCAACATACAA
GCTATCAGAACAGTTATTGCCGAGATCAGAATATTTCTCTCTTTTATCAG
TATCATCAGTGGAAGCTTCTCTACACTCTACTTTTGCTTCTTTGGAGGGT
GTCCTCATATCCATAACTTTTGAACCTACAGGATAGGCAAGTGAACCAGT
TCCTATGCTTGAATGCATTGTCTGGCATTGCTTTATAAGGTCCTTGTAAC
GTTCCCTCCGGGCTATCCTTAATTGCCTTCGGTGATCTGCAGTGCTCCCC
AATGCATAGCAACCTAGAAGAAACTCCCAAACTTCTGATCTTATAGATGG
ATCGACCCCCCCTAAAATAATCAACTTGAGTACTTTGTGAAAATCAACAA
CCTTCCCTTCATTATCAAAAGCAGCCTGCCACTTCTCTGGCTTCAGCATC
TTGTTTGCCTTGATAGGAGACTGGGAAAGACAAGGATCTCCGATGTCGCG
AACGATTGAACCGACTCTGTGAATATTGACAGCTCCGGCAGCAGCGGCGA
CGGCAGCTTTTCCATACC

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR000195	Rab-GAP-TBC_dom

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g.raimondii_cottongen_reftransV1_0001186, g.raimondii_cottongen_reftransV1_0001186 (contig) Gossypium raimondii

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