g.raimondii_cottongen_reftransV1_0001112, g.raimondii_cottongen_reftransV1_0001112 (contig) Gossypium raimondii

Overview
Nameg.raimondii_cottongen_reftransV1_0001112
Unique Nameg.raimondii_cottongen_reftransV1_0001112
Typecontig
OrganismGossypium raimondii (Gossypium raimondii)
Sequence length720
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr01chromosomeg.raimondii_cottongen_reftransV1_0001112:1..720 .
Chr01:8966194..8967208 -
n/a
Homology
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy TrEMBL
Match: V4L0C2_EUTSA (MATE efflux family protein OS=Eutrema salsugineum GN=EUTSA_v10002904mg PE=3 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 2.315e-88
Identity = 140/237 (59.07%), Postives = 181/237 (76.37%), Query Frame = 2
Query:    2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHYTI 712
            VA+AT+F NV+GFS++ GL GALETL GQAYGA +Y K+G+YTY AI  ++PIC  + ++W+YM+KLL+ IGQDP+++++A  YA+ LIP LF  A+ Q   RF Q+Q LV+P+++ +L TL F+I VCW LVF FG GS G ALAIS S WFNV++L  Y+R+S SCEKTR+    D    VK+FFH+ IPSA M CLEWW FE+L+L SGLLPN KLETSVLS+CL+  SLHY I
Sbjct:   70 VALATSFANVSGFSIMAGLVGALETLCGQAYGAKRYAKMGTYTYSAIASNVPICFLISIVWIYMEKLLISIGQDPEISKLAGSYAVWLIPALFAQAVQQPLTRFLQTQGLVIPLLYCALTTLLFYIPVCWTLVFTFGLGSNGAALAISLSYWFNVLILAVYVRFSSSCEKTRSFVSHDFVSGVKQFFHYGIPSAAMTCLEWWLFELLILSSGLLPNPKLETSVLSVCLTIGSLHYVI 306          
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy TrEMBL
Match: U5GCB2_POPTR (MATE efflux family protein OS=Populus trichocarpa GN=POPTR_0005s15040g PE=3 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 5.605e-88
Identity = 146/235 (62.13%), Postives = 190/235 (80.85%), Query Frame = 2
Query:    2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHY 706
            V+I  +F  VTGFSLL+GL G LETL GQAYGA QY KLG+YTYCAII  +PIC+PV +LW++MD++L+ IGQDP+++ +A +YA+CLIP LF  AI+QS +R+FQS +L+LPM+ S+  TL FHI +CW L+FK+  G KG ALAI  S W NVI LG YM +S SC+KTR ++  D+F S+KEFF FA+PSAVM CLEWW+FE+L+L++GLLPNS+LETSVLSICL++ SLH+
Sbjct:   66 VSIGGSFATVTGFSLLFGLTGGLETLCGQAYGAEQYQKLGTYTYCAIISLIPICIPVSILWIFMDRILIEIGQDPEISTVACQYAICLIPALFADAILQSLLRYFQSMNLILPMLLSTSVTLFFHIPLCWALIFKWKLGVKGAALAIDVSYWLNVIFLGLYMGFSSSCKKTRVINWNDIFSSIKEFFCFALPSAVMVCLEWWTFELLILLAGLLPNSQLETSVLSICLTTISLHF 300          
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy TrEMBL
Match: M5XS17_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015054mg PE=4 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 8.475e-88
Identity = 142/223 (63.68%), Postives = 182/223 (81.61%), Query Frame = 2
Query:    2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLK-DVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETS 667
            V+IAT+F +VTGFSLL GL GALETL GQAYGA QY KLG YTY +I+C   +C+P+ LLW++ DK+L LIGQDP ++ +A++Y++CLIP LF YA++QS VR+FQ+QSL+LPM++SS A LC H+ +CW L FK   GS G ALAISFS WFNV+LLGFYM+YS +CEKTR   L  +VFL++KEFF FA+PSA+M CLEWWS+E+L+L+SG+L N KLETS
Sbjct:   14 VSIATSFTSVTGFSLLSGLVGALETLCGQAYGAEQYQKLGIYTYTSILCLCLVCVPISLLWIFTDKILQLIGQDPLISNVAHKYSLCLIPNLFSYAVLQSLVRYFQTQSLILPMLYSSCAALCLHVPLCWGLTFKLKLGSIGAALAISFSCWFNVLLLGFYMKYSVACEKTRAHVLSIEVFLNIKEFFRFAVPSALMVCLEWWSYEVLILLSGILSNPKLETS 236          
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy TrEMBL
Match: D7L7F2_ARALL (MATE efflux family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_342752 PE=3 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 1.009e-87
Identity = 140/234 (59.83%), Postives = 177/234 (75.64%), Query Frame = 2
Query:    2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLH 703
            VA+ATAF NV+GF +++GL GALETL GQAYGA QY K+G+YTY AI+ ++PICL + +LW YMDKLL+ IGQDP ++++A  YA+CLIP L   A+ Q   RF Q+Q LVLP+++ ++ TL FHI VC  LV+ FG GS G ALAI FS WFNV++L  Y+R+S SCEKTR     D  LSVK+FF + IPSA M  +EW  FE+L+L SGLLPN KLETSVLSICL++ SLH
Sbjct:   70 VALATAFANVSGFGIMYGLVGALETLCGQAYGAKQYDKIGTYTYSAIVSNVPICLLISILWFYMDKLLISIGQDPDISKVAGSYAVCLIPALLAQAVQQPLTRFLQTQGLVLPLLYCAITTLLFHIPVCLTLVYAFGLGSNGAALAIGFSYWFNVLILALYVRFSRSCEKTRGFVSDDFVLSVKQFFQYGIPSAAMTTIEWSLFELLILSSGLLPNPKLETSVLSICLTTSSLH 303          
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy TrEMBL
Match: D7L7F3_ARALL (MATE efflux family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_480065 PE=3 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 1.135e-87
Identity = 140/237 (59.07%), Postives = 179/237 (75.53%), Query Frame = 2
Query:    2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHYTI 712
            VA+AT+F NV+GFSL++GL GALETL GQAYGA QY K+G+YTY AI+ ++PI + + +LW YMDKLL+ IGQDP ++++A  YA+CLIP L   A+ Q   RF Q+Q LVLP+++ ++ TL FHI VC VLV+ FG GS G ALAI  S WFNV++L  Y+R+S +CEKTR     D  LSVK+FF + IPSA M  +EW  FE+L+L SGLLPN KLETSVLSICL++ SLHY I
Sbjct:   70 VALATSFANVSGFSLMFGLVGALETLCGQAYGAKQYAKIGTYTYSAIVSNIPIVVLISILWFYMDKLLISIGQDPDISKVAGSYAVCLIPALLAQAVQQPLNRFLQTQGLVLPLLYCAITTLLFHIFVCLVLVYAFGLGSNGAALAIGLSYWFNVLILALYVRFSSACEKTRGFVSDDFVLSVKQFFQYGIPSAAMTTIEWSLFELLILSSGLLPNPKLETSVLSICLTTSSLHYVI 306          
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy Swiss-Prot
Match: S47A1_MOUSE (Multidrug and toxin extrusion protein 1 OS=Mus musculus GN=Slc47a1 PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 4.334e-19
Identity = 66/221 (29.86%), Postives = 105/221 (47.51%), Query Frame = 2
Query:    2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLK-------DVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLL 643
            V +A A  NVTG S+  GL  A +TL  Q YG+     +G       +  L  C P   L++  +++L+L  QDP V+ +   Y M  IP L    +   QV++  +Q +VLP + + +A    + +  +V ++    G  G ALA + S +   I L  Y+ +       R LH         +       F   AIPS +M C+EWW++E+   +SG+L
Sbjct:   74 VTLAIAVINVTGISVGHGLSSACDTLISQTYGSQNLKHVGVILQRGTLILLLCCFPCWALFINTEQILLLFRQDPDVSRLTQTYVMIFIPALPAAFLYTLQVKYLLNQGIVLPQIMTGIAANLVNALANYVFLYHLHLGVMGSALANTISQFALAIFLFLYILW-------RRLHQATWGGWSWECLQDWASFLRLAIPSMLMLCIEWWAYEVGSFLSGIL 287          
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy Swiss-Prot
Match: S47A1_PONAB (Multidrug and toxin extrusion protein 1 OS=Pongo abelii GN=SLC47A1 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.716e-18
Identity = 63/214 (29.44%), Postives = 105/214 (49.07%), Query Frame = 2
Query:    2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLL 643
            V +A A  NVTG S+ +GL  A +TL  Q YG+     +G     + +  L  C P   L++    +L+L  QDP V+ +   Y    IP L    +   QV++  +Q +VLP + + +A    + +  ++ + +   G+ G ALA   S +   +LL FY+      + T      +       F H A+PS +M C+EWW++E+   +SG+L
Sbjct:   74 VTLAIAVINVTGVSVGFGLSSACDTLISQTYGSQNLKHVGVILQRSALILLLCCFPCWALFLNTQHILLLFRQDPDVSRLTQTYVTIFIPALPATFLYMLQVKYLLNQGIVLPQIVTGVAANLVNALANYLFLHQLHLGAIGSALANLISQYTLALLLFFYILGKKLHQATWGGWSLECLQDWASFLHLAVPSMLMLCMEWWAYEVGSFLSGIL 287          
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy Swiss-Prot
Match: S47A1_RAT (Multidrug and toxin extrusion protein 1 OS=Rattus norvegicus GN=Slc47a1 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 2.326e-18
Identity = 63/214 (29.44%), Postives = 103/214 (48.13%), Query Frame = 2
Query:    2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLL 643
            V +A A  NVTG S+  GL  A +TL  Q YG+     +G       +  L  C P   L++  +++L+L  QDP V+ +   Y M  IP L    +   QV++  +Q +VLP + + +A    + +  ++ + +   G  G ALA + S +   I L  Y+ +      T      +       F   AIPS +M C+EWW++E+   +SG+L
Sbjct:   73 VTLAIAVINVTGISVGHGLSSACDTLISQTYGSQNLKHVGVILQRGTLILLLCCFPCWALFINTEQILLLFRQDPDVSRLTQTYVMVFIPALPAAFLYTLQVKYLLNQGIVLPQVITGIAANLVNALANYLFLHQLHLGVMGSALANTISQFALAIFLFLYILWRKLHHATWGGWSWECLQDWASFLQLAIPSMLMLCIEWWAYEVGSFLSGIL 286          
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy Swiss-Prot
Match: YL47_SCHPO (Uncharacterized transporter C323.07c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC323.07c PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.780e-18
Identity = 71/245 (28.98%), Postives = 129/245 (52.65%), Query Frame = 2
Query:    5 AIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSY-TYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCF----HIIVCWVLVFK--FGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHYTISF 718
            +++T    ++ FS+  G+  +L+TL  QA+GA + Y +  Y   C +I ++ + +PV L+W+ ++ +L+ + QDP VA +  RY    I    GYA+ ++  R+ Q+Q +  P+ +     LCF    +I++ ++LV+    GFG  G  +A++ + WF  I L  Y+ +S S         +    ++    HF+    +M   EW ++E+  L +G L  + L +   SI L+S SL + I F
Sbjct:  131 SLSTMTAAISAFSIFQGVISSLDTLATQAFGANKPYNVAIYLQRCLLILAV-LHIPVALIWLNLEHILIFLHQDPMVAHLCGRYMRVFILAAPGYAVFEALKRYLQAQGIFTPITY----VLCFAAPLNILLNYLLVWHPTIGFGFLGAPVAVATTFWFQSICLILYICFS-STPIPWPGFSRQALKNLSPMLHFSFHGMLMIVTEWAAYEMTSLGAGYLGTAPLASQ--SILLTSTSLLFQIPF 367          
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy Swiss-Prot
Match: S47A1_XENTR (Multidrug and toxin extrusion protein 1 OS=Xenopus tropicalis GN=slc47a1 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.685e-17
Identity = 59/214 (27.57%), Postives = 107/214 (50.00%), Query Frame = 2
Query:    2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLL 643
            V++A    N+TG ++  GL GA +TL  Q +G +    +G      I+  L  C P   L +  + +L+L  QDP+V+++   Y +  +P L    + Q   ++ Q+Q ++ P + +      F+ +  ++L++  G G  G A A + S +  +ILL  Y+ +      T     +  F     F   A+ S +M C+EWW+FEI + ++G+L
Sbjct:   88 VSLAITIINITGVAVGTGLAGACDTLISQTFGGSNLKLVGIILQRGILILLLFCFPCWALLINTESILLLFRQDPEVSKLTQIYVLIFLPALPAAFLYQLLAKYLQNQGIIYPQVLTGFIANIFNALFNYILLYVLGLGVMGSACANTVSQFIQMILLFLYIVWRRLYADTWGGWSQACFEEWGAFIRLAVASMLMLCIEWWAFEISMFLAGVL 301          
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy Swiss-Prot
Match: S47A1_DANRE (Multidrug and toxin extrusion protein 1 OS=Danio rerio GN=slc47a1 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.329e-17
Identity = 62/219 (28.31%), Postives = 107/219 (48.86%), Query Frame = 2
Query:    2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKL 658
            VA+A A  NVTG S+  GL  A +TL  Q +G+    ++G      I+  L  C P   L +  + +L+ + Q P VA ++  Y    +P L    + Q Q R+ Q+Q ++ P + +  A    + ++ +V +     G  G A A + S +   + L  Y+R+    + T     +D       F   A+PS +M C+EWW++EI   ++GL+  ++L
Sbjct:   92 VALAIAVINVTGISIGSGLASACDTLISQTFGSNNLKRVGVILQRGILILLLACFPCWALLINTEPILLAVRQSPNVASLSQLYVKIFMPALPAAFMYQLQGRYLQNQGIIWPQVITGAAGNILNALINYVFLHLLELGVAGSAAANTISQYSLAVFLYVYIRWKNLHKATWDGWSRDCLQEWGAFIRLALPSMLMLCVEWWTYEIGGFLAGLISETEL 310          
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy Swiss-Prot
Match: S47A2_MOUSE (Multidrug and toxin extrusion protein 2 OS=Mus musculus GN=Slc47a2 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 7.586e-17
Identity = 72/239 (30.13%), Postives = 119/239 (49.79%), Query Frame = 2
Query:    2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLLPNSKLETSVLSICLSSDSLHYTISF 718
            V +A +  NVTG S+  GL  A +TL  Q++G     ++G      I+  L  C P   +++  ++LL+L+ QDP VA +A  Y M  IP L    + Q Q R+ QSQ +++P +   +A    ++ +   L++    G  G A A + S +F   LL  Y+ +      T     ++ F     +   AIPS  M C+EWW+FEI   ++GL+  ++L    +   L+  S+ Y + F
Sbjct:   83 VTLAVSVVNVTGISVGTGLASACDTLMSQSFGGKNLKRVGVILQRGILILLLCCFPCWAIFLNTERLLLLLRQDPDVARLAQVYVMICIPALPAAFLFQLQTRYLQSQGIIMPQVIVGIAANVVNVGMNAFLLYALDLGVVGSAWANTTSQFFLSALLFLYVWWKRIHIHTWGGWTRECFQEWSSYTRLAIPSMFMVCIEWWTFEIGTFLAGLVNVTELGAQAVIYELA--SVAYMVPF 319          
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy Swiss-Prot
Match: S47A2_PONAB (Multidrug and toxin extrusion protein 2 OS=Pongo abelii GN=SLC47A2 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 9.758e-15
Identity = 65/221 (29.41%), Postives = 102/221 (46.15%), Query Frame = 2
Query:    2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLK-------DVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLL 643
            V +A AF NV G S+  GL  A +TL  Q++G+     +G       +  L  CLP   L++    +L+L  QDP+V+ +   Y M  IPGL    +     ++ Q+Q +  P + S +   C + +  + LV     G +G A A   S +   + L  Y+         + LHL+               FF  A+PS +M C+EWW++EI   + GLL
Sbjct:   70 VTLAVAFVNVCGVSVGVGLSSACDTLMSQSFGSPNKKHVGVILQRGALVLLLCCLPCWALFLNTQHILLLFRQDPEVSRLTQDYVMIFIPGLPVIFLYNLLAKYLQNQKITWPQVLSGVVGNCVNGVANYALVSVLNLGVRGSAYANIISQFAQTVFLLLYIVL-------KKLHLETWAGWSSQCLQDWGPFFSLAVPSMLMICVEWWAYEIGSFLMGLL 283          
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy Swiss-Prot
Match: S47A1_HUMAN (Multidrug and toxin extrusion protein 1 OS=Homo sapiens GN=SLC47A1 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.048e-14
Identity = 62/214 (28.97%), Postives = 102/214 (47.66%), Query Frame = 2
Query:    2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLKDVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLL 643
            V +A A  NVTG S+ +GL  A +TL  Q YG+     +G     + +  L  C P   L++    +L+L  QDP V+ +   Y    IP L    +   QV++  +Q +VLP + + +A    + +  ++ + +   G  G ALA   S +   +LL  Y+      + T      +       F   AIPS +M C+EWW++E+   +SG+L
Sbjct:   74 VTLAIAVINVTGVSVGFGLSSACDTLISQTYGSQNLKHVGVILQRSALVLLLCCFPCWALFLNTQHILLLFRQDPDVSRLTQTYVTIFIPALPATFLYMLQVKYLLNQGIVLPQIVTGVAANLVNALANYLFLHQLHLGVIGSALANLISQYTLALLLFLYILGKKLHQATWGGWSLECLQDWASFLRLAIPSMLMLCMEWWAYEVGSFLSGIL 287          
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy Swiss-Prot
Match: S47A2_RABIT (Multidrug and toxin extrusion protein 2 OS=Oryctolagus cuniculus GN=SLC47A2 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.283e-14
Identity = 65/221 (29.41%), Postives = 101/221 (45.70%), Query Frame = 2
Query:    2 VAIATAFCNVTGFSLLWGLCGALETLNGQAYGATQYYKLGSYTYCAIICSLPICLPVCLLWMYMDKLLVLIGQDPQVAEIANRYAMCLIPGLFGYAIXXXXXXXXXXXXLVLPMMFSSLATLCFHIIVCWVLVFKFGFGSKGGALAISFSNWFNVILLGFYMRYSPSCEKTRTLHLK-------DVFLSVKEFFHFAIPSAVMACLEWWSFEILVLMSGLL 643
            V +  AF NV G S+  GL  A +TL  Q++G+     +G       +  L  CLP   L++    +L+L  QDP V+ +   YAM  IPGL    +     ++ Q+Q +V P + S +   C + +  + LV     G +G A A + S +     L  ++         + LHL+               F   AIPS +M C+EWW++EI   + GLL
Sbjct:   99 VTLGVAFVNVCGVSVGAGLSSACDTLMSQSFGSPNKKHVGVILQRGSLILLLCCLPCWALFLNTQHILLLFRQDPAVSRLTQDYAMIFIPGLPAIFLYSLLAKYLQNQGIVWPQVLSGVVGNCVNGVANYALVSVLNLGVRGSAYANTISQFVQAAFLFLHI-------VLKKLHLETWEGWSSQCLRDWGPFLSLAIPSMLMMCVEWWAYEIGSFLMGLL 312          
The following BLAST results are available for this feature:
BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy TrEMBL
Analysis Date: 2016-11-09 (Homology Analysis for Gossypium raimondii CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
V4L0C2_EUTSA2.315e-8859.07MATE efflux family protein OS=Eutrema salsugineum ... [more]
U5GCB2_POPTR5.605e-8862.13MATE efflux family protein OS=Populus trichocarpa ... [more]
M5XS17_PRUPE8.475e-8863.68Uncharacterized protein OS=Prunus persica GN=PRUPE... [more]
D7L7F2_ARALL1.009e-8759.83MATE efflux family protein OS=Arabidopsis lyrata s... [more]
D7L7F3_ARALL1.135e-8759.07MATE efflux family protein OS=Arabidopsis lyrata s... [more]

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BLAST of g.raimondii_cottongen_reftransV1_0001112 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-09 (Homology Analysis for Gossypium raimondii CottonGen RefTrans V1 vs SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
S47A1_MOUSE4.334e-1929.86Multidrug and toxin extrusion protein 1 OS=Mus mus... [more]
S47A1_PONAB1.716e-1829.44Multidrug and toxin extrusion protein 1 OS=Pongo a... [more]
S47A1_RAT2.326e-1829.44Multidrug and toxin extrusion protein 1 OS=Rattus ... [more]
YL47_SCHPO2.780e-1828.98Uncharacterized transporter C323.07c OS=Schizosacc... [more]
S47A1_XENTR1.685e-1727.57Multidrug and toxin extrusion protein 1 OS=Xenopus... [more]
S47A1_DANRE2.329e-1728.31Multidrug and toxin extrusion protein 1 OS=Danio r... [more]
S47A2_MOUSE7.586e-1730.13Multidrug and toxin extrusion protein 2 OS=Mus mus... [more]
S47A2_PONAB9.758e-1529.41Multidrug and toxin extrusion protein 2 OS=Pongo a... [more]
S47A1_HUMAN1.048e-1428.97Multidrug and toxin extrusion protein 1 OS=Homo sa... [more]
S47A2_RABIT3.283e-1429.41Multidrug and toxin extrusion protein 2 OS=Oryctol... [more]

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Sequences
The following sequences are available for this feature:

contig sequence

>g.raimondii_cottongen_reftransV1_0001112 ID=g.raimondii_cottongen_reftransV1_0001112; Name=g.raimondii_cottongen_reftransV1_0001112; organism=Gossypium raimondii; type=contig; length=720bp
TGTTGCCATCGCCACAGCTTTCTGCAATGTCACTGGCTTTAGTCTCCTTT
GGGGACTTTGTGGTGCACTCGAAACCCTAAACGGACAAGCATATGGGGCA
ACGCAATACTATAAACTAGGAAGCTACACTTATTGTGCCATAATATGTTC
CCTTCCAATTTGTCTCCCGGTGTGTCTCCTATGGATGTATATGGACAAAC
TATTAGTGCTAATAGGTCAAGACCCTCAAGTTGCAGAGATAGCTAATAGA
TACGCCATGTGTCTCATACCTGGATTATTTGGTTACGCCATTGTTCAATC
ACAAGTTCGTTTCTTCCAATCCCAGAGCTTGGTTCTTCCTATGATGTTTA
GTTCTCTTGCAACATTGTGTTTCCATATAATTGTTTGTTGGGTTTTGGTA
TTCAAATTTGGGTTTGGAAGCAAAGGAGGGGCATTGGCTATCAGTTTCTC
GAATTGGTTTAATGTTATATTGCTTGGGTTTTACATGAGATACTCACCTT
CATGTGAGAAAACCCGAACCCTCCATTTGAAAGATGTTTTCTTGAGTGTC
AAGGAGTTCTTTCATTTTGCCATACCTTCTGCAGTAATGGCTTGCCTCGA
ATGGTGGTCGTTCGAGATTCTTGTATTAATGTCTGGACTTCTGCCAAATT
CCAAGCTTGAAACATCGGTTCTTTCTATATGCCTTTCAAGTGATTCTTTG
CATTATACTATATCGTTTGG
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